Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045529.t1 | XP_003607543.1 | 97.8 | 765 | 17 | 0 | 1 | 765 | 85 | 849 | 0.00E+00 | 1402.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045529.t1 | Q9Y5Q9 | 21.3 | 710 | 468 | 10 | 87 | 760 | 152 | 806 | 2.4e-43 | 178.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045529.t1 | G7JV00 | 97.8 | 765 | 17 | 0 | 1 | 765 | 85 | 849 | 0.0e+00 | 1402.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene76728 | MS.gene045529 | PPI |
| MS.gene045529 | MS.gene82237 | PPI |
| MS.gene045529 | MS.gene77045 | PPI |
| MS.gene045529 | MS.gene48819 | PPI |
| MS.gene045529 | MS.gene42075 | PPI |
| MS.gene87743 | MS.gene045529 | PPI |
| MS.gene87064 | MS.gene045529 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045529.t1 | MTR_4g079390 | 97.778 | 765 | 17 | 0 | 1 | 765 | 85 | 849 | 0.0 | 1555 |
| MS.gene045529.t1 | MTR_4g074860 | 83.053 | 773 | 122 | 3 | 1 | 765 | 85 | 856 | 0.0 | 1290 |
| MS.gene045529.t1 | MTR_4g074860 | 83.053 | 773 | 122 | 3 | 1 | 765 | 85 | 856 | 0.0 | 1289 |
| MS.gene045529.t1 | MTR_4g074860 | 81.315 | 669 | 116 | 3 | 1 | 661 | 85 | 752 | 0.0 | 1083 |
| MS.gene045529.t1 | MTR_4g074690 | 77.863 | 262 | 56 | 2 | 1 | 261 | 72 | 332 | 6.03e-142 | 421 |
| MS.gene045529.t1 | MTR_4g074700 | 64.356 | 101 | 14 | 3 | 194 | 272 | 1 | 101 | 1.15e-29 | 113 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045529.t1 | AT1G17680 | 42.632 | 760 | 392 | 13 | 11 | 765 | 88 | 808 | 2.97e-176 | 529 |
| MS.gene045529.t1 | AT1G17680 | 42.632 | 760 | 392 | 13 | 11 | 765 | 88 | 808 | 2.97e-176 | 529 |
| MS.gene045529.t1 | AT1G17680 | 42.632 | 760 | 392 | 13 | 11 | 765 | 88 | 808 | 2.97e-176 | 529 |
Find 164 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTTAACTTTCAAATTTA+AGG | 0.080716 | 4.3:-29676624 | None:intergenic |
| CGAAATACGCTATTTGTTTC+TGG | 0.100990 | 4.3:-29682632 | None:intergenic |
| CATTGTCTTGTAGTATTTCT+AGG | 0.150542 | 4.3:-29679863 | None:intergenic |
| AGAGGAGGAATTAATGAATT+TGG | 0.152418 | 4.3:+29672540 | MS.gene045529:CDS |
| CTCGGTACTCCATCGATTTC+TGG | 0.226719 | 4.3:-29672070 | None:intergenic |
| AGCATTCCTCTACAATAATT+TGG | 0.233608 | 4.3:+29684169 | MS.gene045529:CDS |
| GCAAGGGAAGATGATATTTC+TGG | 0.262174 | 4.3:+29672499 | MS.gene045529:CDS |
| CGCCTTAATTTCCATCAATA+TGG | 0.262883 | 4.3:-29676546 | None:intergenic |
| TGCTTTCGAAATACAATAAC+TGG | 0.275722 | 4.3:-29675541 | None:intergenic |
| TACCATATTGATGGAAATTA+AGG | 0.286308 | 4.3:+29676544 | MS.gene045529:CDS |
| TTGTCTCCTCCAAAGGATTC+TGG | 0.294300 | 4.3:+29679954 | MS.gene045529:CDS |
| TGATACGGGTCAGGTAAATT+TGG | 0.302254 | 4.3:-29673983 | None:intergenic |
| TCCCAAAGTGATGAATCTTT+TGG | 0.304300 | 4.3:-29674085 | None:intergenic |
| GAGGAGGAATTAATGAATTT+GGG | 0.312899 | 4.3:+29672541 | MS.gene045529:CDS |
| ATAGCGTATTTCGAGGATTC+AGG | 0.315272 | 4.3:+29682642 | MS.gene045529:CDS |
| CAGATCAGATGATGAGGTTA+TGG | 0.318178 | 4.3:-29682666 | None:intergenic |
| GGCCTTGGTCAACCTGGCGC+TGG | 0.319693 | 4.3:+29684103 | MS.gene045529:CDS |
| CTTTCCCCTCCTCAACTAGA+AGG | 0.325341 | 4.3:-29679911 | None:intergenic |
| TCCAAAAGATTCATCACTTT+GGG | 0.330712 | 4.3:+29674084 | MS.gene045529:CDS |
| ACACAATCAAAACCTTGTTT+AGG | 0.335593 | 4.3:-29683591 | None:intergenic |
| GCTTTAACTTTCAAATTTAA+GGG | 0.357085 | 4.3:-29676623 | None:intergenic |
| GCCTTCTAAGACTAATATCT+TGG | 0.358473 | 4.3:-29675578 | None:intergenic |
| ACGTGCTTGCTTGCATTCTC+TGG | 0.359617 | 4.3:-29677463 | None:intergenic |
| CAATTAGGTCGAAAGCTTCC+AGG | 0.364510 | 4.3:+29682863 | MS.gene045529:intron |
| CTCCAAAAGATTCATCACTT+TGG | 0.366950 | 4.3:+29674083 | MS.gene045529:CDS |
| GCTCAACTTGACCACACTTT+TGG | 0.370971 | 4.3:-29676445 | None:intergenic |
| GGAGCTGTCCATGGTGCAAT+TGG | 0.371499 | 4.3:+29674013 | MS.gene045529:CDS |
| TGGGGATCATGAAAATGAAA+TGG | 0.381145 | 4.3:+29674033 | MS.gene045529:CDS |
| TCTACTTGGTACCATATTGA+TGG | 0.390259 | 4.3:+29676535 | MS.gene045529:CDS |
| AAAGCCGAGGCAGTGGCCTC+TGG | 0.397065 | 4.3:+29682931 | MS.gene045529:CDS |
| TATCAATTTAACTCTAAGAT+TGG | 0.400611 | 4.3:+29683284 | MS.gene045529:CDS |
| CCTTCTAAGACTAATATCTT+GGG | 0.404695 | 4.3:-29675577 | None:intergenic |
| ACACTTGCATTTACTCCATC+TGG | 0.405571 | 4.3:-29676506 | None:intergenic |
| CCCAAGATATTAGTCTTAGA+AGG | 0.407399 | 4.3:+29675577 | MS.gene045529:CDS |
| TGCTGCAGGGCCAATCAAAA+AGG | 0.409511 | 4.3:+29682561 | MS.gene045529:intron |
| GAGCTGTCCATGGTGCAATT+GGG | 0.409612 | 4.3:+29674014 | MS.gene045529:CDS |
| GAGATCTTGAGAAAAGAGTA+AGG | 0.413274 | 4.3:+29682597 | MS.gene045529:CDS |
| GGGGATCATGAAAATGAAAT+GGG | 0.416645 | 4.3:+29674034 | MS.gene045529:CDS |
| GCCTTGGTCAACCTGGCGCT+GGG | 0.420149 | 4.3:+29684104 | MS.gene045529:CDS |
| AGATTAACCAATGGATTCTC+AGG | 0.429542 | 4.3:-29683977 | None:intergenic |
| TGCTAGATGTTATCGATCCT+TGG | 0.430229 | 4.3:+29678971 | MS.gene045529:CDS |
| GCAGACTCATTGATGGGTCT+TGG | 0.435759 | 4.3:+29677505 | MS.gene045529:CDS |
| TTCCTTGTTGTCTCCTCCAA+AGG | 0.436418 | 4.3:+29679947 | MS.gene045529:CDS |
| TGTTGAAGCACGCATAGCTT+TGG | 0.438227 | 4.3:+29679884 | MS.gene045529:CDS |
| CACAAGGGAGAATCTGTGTT+AGG | 0.442926 | 4.3:-29683096 | None:intergenic |
| TTAAATTTGAAAGTTAAAGC+TGG | 0.445910 | 4.3:+29676626 | MS.gene045529:CDS |
| TGTGAATGTAAGTCTCCCTT+TGG | 0.449427 | 4.3:+29680160 | MS.gene045529:CDS |
| GGAATCTGCCATGTTCATCT+TGG | 0.450294 | 4.3:+29676647 | MS.gene045529:CDS |
| TCTCATTCTTCTCAGTAGAC+AGG | 0.455477 | 4.3:-29683317 | None:intergenic |
| TGGAGGAGACAACAAGGAAA+TGG | 0.456082 | 4.3:-29679943 | None:intergenic |
| AGATCAGATGATGAGGTTAT+GGG | 0.456324 | 4.3:-29682665 | None:intergenic |
| TTACAAGTACCAGAATCCTT+TGG | 0.456803 | 4.3:-29679963 | None:intergenic |
| TGCTTGTTTCCTTTCTTCCA+AGG | 0.456939 | 4.3:-29678988 | None:intergenic |
| GGAATTAATGAATTTGGGAC+AGG | 0.462807 | 4.3:+29672546 | MS.gene045529:CDS |
| GCTTTCTGTTGTCGAGAGCT+CGG | 0.464166 | 4.3:-29672088 | None:intergenic |
| TACAGAAAACAAGGTGATGC+TGG | 0.465050 | 4.3:+29675513 | MS.gene045529:intron |
| TCCTTGCCGCATCTTGATGA+TGG | 0.467630 | 4.3:-29683928 | None:intergenic |
| GAAGTCTGAAACCCAGCGCC+AGG | 0.469209 | 4.3:-29684115 | None:intergenic |
| ATTGTCTTGTAGTATTTCTA+GGG | 0.472825 | 4.3:-29679862 | None:intergenic |
| GTTATCGATCCTTGGAAGAA+AGG | 0.473441 | 4.3:+29678979 | MS.gene045529:CDS |
| TCAAATATTACCTTTCGTCT+AGG | 0.473511 | 4.3:-29680209 | None:intergenic |
| TAGAACAATCTCAAGTGGTT+GGG | 0.475771 | 4.3:+29676591 | MS.gene045529:CDS |
| CAAGGGAAGATGATATTTCT+GGG | 0.480036 | 4.3:+29672500 | MS.gene045529:CDS |
| CATCAATGAGTCTGCGACCT+CGG | 0.480689 | 4.3:-29677497 | None:intergenic |
| ATTTGTCATGCCTTGTATCT+CGG | 0.480929 | 4.3:-29683826 | None:intergenic |
| GAGAAAGAAAGCCGAGGCAG+TGG | 0.482279 | 4.3:+29682924 | MS.gene045529:CDS |
| AAGCATCAGTGTGTTGTACA+AGG | 0.483840 | 4.3:+29684143 | MS.gene045529:CDS |
| CCTGACCCGTATCACATCCT+TGG | 0.485736 | 4.3:+29673992 | MS.gene045529:CDS |
| GGCTTCCCTTCTAGTTGAGG+AGG | 0.488281 | 4.3:+29679905 | MS.gene045529:CDS |
| ATTACCTTTCGTCTAGGAGC+TGG | 0.492478 | 4.3:-29680203 | None:intergenic |
| ATTCTGAAAAGTCAAATAGA+TGG | 0.495172 | 4.3:+29680069 | MS.gene045529:CDS |
| CCAAGGATGTGATACGGGTC+AGG | 0.497482 | 4.3:-29673992 | None:intergenic |
| GGAGATCTGCAAGAACAGTC+AGG | 0.497562 | 4.3:+29684190 | MS.gene045529:CDS |
| TACTAACATCAATGATTAGC+TGG | 0.498458 | 4.3:-29683146 | None:intergenic |
| TTTGGCTTCCCTTCTAGTTG+AGG | 0.498866 | 4.3:+29679902 | MS.gene045529:CDS |
| CACATCCTTGGAGCTGTCCA+TGG | 0.499813 | 4.3:+29674004 | MS.gene045529:CDS |
| CGAGGTCGCAGACTCATTGA+TGG | 0.502814 | 4.3:+29677498 | MS.gene045529:CDS |
| AGGTACGGCCTTGGTCAACC+TGG | 0.503195 | 4.3:+29684097 | MS.gene045529:intron |
| CCATGTTCATCTTGGAAACA+TGG | 0.503774 | 4.3:+29676655 | MS.gene045529:CDS |
| GAAACAAATAGCGTATTTCG+AGG | 0.505628 | 4.3:+29682635 | MS.gene045529:CDS |
| GCTTCCCTTCTAGTTGAGGA+GGG | 0.511143 | 4.3:+29679906 | MS.gene045529:CDS |
| TGTAATCTTCACAAAGATGA+AGG | 0.514832 | 4.3:+29683117 | MS.gene045529:CDS |
| CAAGTACCAGAATCCTTTGG+AGG | 0.520382 | 4.3:-29679960 | None:intergenic |
| GAAAAGATATCACAAATGTT+CGG | 0.522632 | 4.3:+29673115 | MS.gene045529:CDS |
| AGACTTCTTCTAAGAAGGCA+AGG | 0.529519 | 4.3:+29672482 | MS.gene045529:CDS |
| CTCATTCTTCTCAGTAGACA+GGG | 0.532616 | 4.3:-29683316 | None:intergenic |
| CCATGTTTCCAAGATGAACA+TGG | 0.536692 | 4.3:-29676655 | None:intergenic |
| TGACTCAGATGATGAGCCTC+AGG | 0.539502 | 4.3:+29682972 | MS.gene045529:CDS |
| TTTGGGAAAGGCTCTTTGTG+TGG | 0.539920 | 4.3:+29674101 | MS.gene045529:CDS |
| ATAGAACAATCTCAAGTGGT+TGG | 0.540791 | 4.3:+29676590 | MS.gene045529:CDS |
| TGGAAACATGGAAATCGCTC+AGG | 0.540833 | 4.3:+29676667 | MS.gene045529:CDS |
| AATAATGTACCGTGTCATAA+CGG | 0.541071 | 4.3:-29673165 | None:intergenic |
| TGCACTAAAAGAAGCAGCTA+AGG | 0.541473 | 4.3:+29675689 | MS.gene045529:CDS |
| AGCTTGGAATTGCTACTACA+AGG | 0.541630 | 4.3:+29683650 | MS.gene045529:CDS |
| ATGTGTTGCATGAAGTTGTC+AGG | 0.541653 | 4.3:+29673954 | MS.gene045529:CDS |
| AAAACCTTGTTTAGGATCTG+TGG | 0.541774 | 4.3:-29683583 | None:intergenic |
| TGAAGAGACTTCTTCTAAGA+AGG | 0.542455 | 4.3:+29672477 | MS.gene045529:CDS |
| AAGATTCATCACTTTGGGAA+AGG | 0.544028 | 4.3:+29674089 | MS.gene045529:CDS |
| ATGTTTCTTAGGTACGGCCT+TGG | 0.545130 | 4.3:+29684088 | MS.gene045529:intron |
| CCATTGGTTAATCTTTGTGT+CGG | 0.546202 | 4.3:+29683986 | MS.gene045529:CDS |
| ACTTCTGCCTGAGAATCCAT+TGG | 0.549095 | 4.3:+29683970 | MS.gene045529:CDS |
| CTTCCCTTCTAGTTGAGGAG+GGG | 0.550556 | 4.3:+29679907 | MS.gene045529:CDS |
| TAAACTGATGCGCAGAAATG+AGG | 0.550840 | 4.3:-29683895 | None:intergenic |
| CTGAAAAGTCAAATAGATGG+TGG | 0.552727 | 4.3:+29680072 | MS.gene045529:CDS |
| CAGTGGCCTCTGGAATTGAC+TGG | 0.555068 | 4.3:+29682941 | MS.gene045529:CDS |
| CAGCTCCAAGGATGTGATAC+GGG | 0.558237 | 4.3:-29673997 | None:intergenic |
| GCAAGTGTAGTTGATCTACT+TGG | 0.559239 | 4.3:+29676521 | MS.gene045529:CDS |
| AATTAGGTCGAAAGCTTCCA+GGG | 0.561911 | 4.3:+29682864 | MS.gene045529:intron |
| ACAGCTCCAAGGATGTGATA+CGG | 0.562158 | 4.3:-29673998 | None:intergenic |
| TCAGAGATTCGTGTACCAAA+GGG | 0.562471 | 4.3:-29680175 | None:intergenic |
| CTTCTAAGACTAATATCTTG+GGG | 0.563281 | 4.3:-29675576 | None:intergenic |
| TTCAGAGATTCGTGTACCAA+AGG | 0.570873 | 4.3:-29680176 | None:intergenic |
| AGTTACCGGTGAGGTTGTTG+CGG | 0.571020 | 4.3:-29672119 | None:intergenic |
| GTTCATAGAACAATCTCAAG+TGG | 0.571430 | 4.3:+29676586 | MS.gene045529:CDS |
| ATGCACATAGTGTTGCAGCT+TGG | 0.575842 | 4.3:+29683634 | MS.gene045529:CDS |
| TACCGGTGAGGTTGTTGCGG+TGG | 0.576570 | 4.3:-29672116 | None:intergenic |
| AGCTGTCCATGGTGCAATTG+GGG | 0.576733 | 4.3:+29674015 | MS.gene045529:CDS |
| TTTCCCCTCCTCAACTAGAA+GGG | 0.577242 | 4.3:-29679910 | None:intergenic |
| GACTGGAAAACCGAGATACA+AGG | 0.579639 | 4.3:+29683816 | MS.gene045529:intron |
| AACCACCGCAACAACCTCAC+CGG | 0.580043 | 4.3:+29672114 | MS.gene045529:CDS |
| AGATCTTGAGAAAAGAGTAA+GGG | 0.592212 | 4.3:+29682598 | MS.gene045529:CDS |
| AGATCTCCAAATTATTGTAG+AGG | 0.594686 | 4.3:-29684175 | None:intergenic |
| TGAATTTGGGACAGGGCAAG+AGG | 0.596139 | 4.3:+29672554 | MS.gene045529:CDS |
| AATTCCAGAGGCCACTGCCT+CGG | 0.597422 | 4.3:-29682935 | None:intergenic |
| ATGCATTAGCATCCTTGCAA+AGG | 0.599277 | 4.3:+29683241 | MS.gene045529:CDS |
| CATGATCCCCAATTGCACCA+TGG | 0.602297 | 4.3:-29674021 | None:intergenic |
| TGCTTCGCTATACCTTTGCA+AGG | 0.602986 | 4.3:-29683253 | None:intergenic |
| GTTGCATGAAGTTGTCAGGC+TGG | 0.604528 | 4.3:+29673958 | MS.gene045529:CDS |
| GACTTCTTCTAAGAAGGCAA+GGG | 0.604579 | 4.3:+29672483 | MS.gene045529:CDS |
| TGAAAAGTCAAATAGATGGT+GGG | 0.604915 | 4.3:+29680073 | MS.gene045529:CDS |
| GCCATCATCAAGATGCGGCA+AGG | 0.607500 | 4.3:+29683927 | MS.gene045529:CDS |
| ATTCCTCCTCTACATCAGCT+AGG | 0.607922 | 4.3:-29672528 | None:intergenic |
| CTTTAGTTCTACCAAAAGTG+TGG | 0.610054 | 4.3:+29676434 | MS.gene045529:intron |
| GAAGATGATATTTCTGGGGT+AGG | 0.611497 | 4.3:+29672505 | MS.gene045529:CDS |
| ATCTTTGTGAAGATTACACA+AGG | 0.612893 | 4.3:-29683112 | None:intergenic |
| TGCGCAGAAATGAGGATAGG+AGG | 0.613954 | 4.3:-29683887 | None:intergenic |
| ATCCTTTGGAGGAGACAACA+AGG | 0.615714 | 4.3:-29679949 | None:intergenic |
| GCAAAGGTATAGCGAAGCAT+CGG | 0.617984 | 4.3:+29683257 | MS.gene045529:CDS |
| TACGAGTCGCCGTTATGACA+CGG | 0.618646 | 4.3:+29673156 | MS.gene045529:CDS |
| GAGGTCGCAGACTCATTGAT+GGG | 0.622019 | 4.3:+29677499 | MS.gene045529:CDS |
| TGATGCGCAGAAATGAGGAT+AGG | 0.622178 | 4.3:-29683890 | None:intergenic |
| GGCGACTCGTATAGTGCATG+AGG | 0.625347 | 4.3:-29673144 | None:intergenic |
| CACTCACAGATCAGATGATG+AGG | 0.627325 | 4.3:-29682672 | None:intergenic |
| ACCCAGCGCCAGGTTGACCA+AGG | 0.630990 | 4.3:-29684105 | None:intergenic |
| TGTTCCAGCTCCTAGACGAA+AGG | 0.638282 | 4.3:+29680199 | MS.gene045529:CDS |
| TTGCACCATGGACAGCTCCA+AGG | 0.639528 | 4.3:-29674009 | None:intergenic |
| AGGCCTAGCTGATGTAGAGG+AGG | 0.641327 | 4.3:+29672525 | MS.gene045529:CDS |
| AGACTACCACCAGAAATCGA+TGG | 0.645298 | 4.3:+29672061 | MS.gene045529:CDS |
| GATTAAGTTAGTTACCGGTG+AGG | 0.657054 | 4.3:-29672128 | None:intergenic |
| TATCTGAAGAGTAAACCAGA+TGG | 0.662621 | 4.3:+29676491 | MS.gene045529:CDS |
| TTCTAAGACTAATATCTTGG+GGG | 0.668365 | 4.3:-29675575 | None:intergenic |
| CCGACACAAAGATTAACCAA+TGG | 0.670200 | 4.3:-29683986 | None:intergenic |
| GGTACTCCATCGATTTCTGG+TGG | 0.670533 | 4.3:-29672067 | None:intergenic |
| AACACCACAGATCCTAAACA+AGG | 0.677930 | 4.3:+29683579 | MS.gene045529:CDS |
| GAATTAATGAATTTGGGACA+GGG | 0.678680 | 4.3:+29672547 | MS.gene045529:CDS |
| GGTAGGCCTAGCTGATGTAG+AGG | 0.679989 | 4.3:+29672522 | MS.gene045529:CDS |
| ATGTAGCCATCATCAAGATG+CGG | 0.682298 | 4.3:+29683922 | MS.gene045529:CDS |
| GCGACTCGTATAGTGCATGA+GGG | 0.688371 | 4.3:-29673143 | None:intergenic |
| ACTTAGCCAGTCAATTCCAG+AGG | 0.702156 | 4.3:-29682947 | None:intergenic |
| GCTACTACAAGGTCGTATCG+AGG | 0.704787 | 4.3:+29683661 | MS.gene045529:CDS |
| AAGGGAAGATGATATTTCTG+GGG | 0.706308 | 4.3:+29672501 | MS.gene045529:CDS |
| TCTTTGTGAAGATTACACAA+GGG | 0.712083 | 4.3:-29683111 | None:intergenic |
| GAAGGAGAGAAAGAAAGCCG+AGG | 0.715440 | 4.3:+29682918 | MS.gene045529:CDS |
| GCACGTTGAGTTGATCACCG+AGG | 0.799843 | 4.3:+29677480 | MS.gene045529:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 29672053 | 29684211 | 29672053 | ID=MS.gene045529 |
| chr4.3 | mRNA | 29672053 | 29684211 | 29672053 | ID=MS.gene045529.t1;Parent=MS.gene045529 |
| chr4.3 | exon | 29672053 | 29672135 | 29672053 | ID=MS.gene045529.t1.exon1;Parent=MS.gene045529.t1 |
| chr4.3 | CDS | 29672053 | 29672135 | 29672053 | ID=cds.MS.gene045529.t1;Parent=MS.gene045529.t1 |
| chr4.3 | exon | 29672477 | 29672585 | 29672477 | ID=MS.gene045529.t1.exon2;Parent=MS.gene045529.t1 |
| chr4.3 | CDS | 29672477 | 29672585 | 29672477 | ID=cds.MS.gene045529.t1;Parent=MS.gene045529.t1 |
| chr4.3 | exon | 29673064 | 29673177 | 29673064 | ID=MS.gene045529.t1.exon3;Parent=MS.gene045529.t1 |
| chr4.3 | CDS | 29673064 | 29673177 | 29673064 | ID=cds.MS.gene045529.t1;Parent=MS.gene045529.t1 |
| chr4.3 | exon | 29673947 | 29674128 | 29673947 | ID=MS.gene045529.t1.exon4;Parent=MS.gene045529.t1 |
| chr4.3 | CDS | 29673947 | 29674128 | 29673947 | ID=cds.MS.gene045529.t1;Parent=MS.gene045529.t1 |
| chr4.3 | exon | 29675518 | 29675710 | 29675518 | ID=MS.gene045529.t1.exon5;Parent=MS.gene045529.t1 |
| chr4.3 | CDS | 29675518 | 29675710 | 29675518 | ID=cds.MS.gene045529.t1;Parent=MS.gene045529.t1 |
| chr4.3 | exon | 29676440 | 29676688 | 29676440 | ID=MS.gene045529.t1.exon6;Parent=MS.gene045529.t1 |
| chr4.3 | CDS | 29676440 | 29676688 | 29676440 | ID=cds.MS.gene045529.t1;Parent=MS.gene045529.t1 |
| chr4.3 | exon | 29677442 | 29677588 | 29677442 | ID=MS.gene045529.t1.exon7;Parent=MS.gene045529.t1 |
| chr4.3 | CDS | 29677442 | 29677588 | 29677442 | ID=cds.MS.gene045529.t1;Parent=MS.gene045529.t1 |
| chr4.3 | exon | 29678951 | 29679029 | 29678951 | ID=MS.gene045529.t1.exon8;Parent=MS.gene045529.t1 |
| chr4.3 | CDS | 29678951 | 29679029 | 29678951 | ID=cds.MS.gene045529.t1;Parent=MS.gene045529.t1 |
| chr4.3 | exon | 29679862 | 29679975 | 29679862 | ID=MS.gene045529.t1.exon9;Parent=MS.gene045529.t1 |
| chr4.3 | CDS | 29679862 | 29679975 | 29679862 | ID=cds.MS.gene045529.t1;Parent=MS.gene045529.t1 |
| chr4.3 | exon | 29680054 | 29680220 | 29680054 | ID=MS.gene045529.t1.exon10;Parent=MS.gene045529.t1 |
| chr4.3 | CDS | 29680054 | 29680220 | 29680054 | ID=cds.MS.gene045529.t1;Parent=MS.gene045529.t1 |
| chr4.3 | exon | 29682569 | 29682687 | 29682569 | ID=MS.gene045529.t1.exon11;Parent=MS.gene045529.t1 |
| chr4.3 | CDS | 29682569 | 29682687 | 29682569 | ID=cds.MS.gene045529.t1;Parent=MS.gene045529.t1 |
| chr4.3 | exon | 29682870 | 29682993 | 29682870 | ID=MS.gene045529.t1.exon12;Parent=MS.gene045529.t1 |
| chr4.3 | CDS | 29682870 | 29682993 | 29682870 | ID=cds.MS.gene045529.t1;Parent=MS.gene045529.t1 |
| chr4.3 | exon | 29683093 | 29683161 | 29683093 | ID=MS.gene045529.t1.exon13;Parent=MS.gene045529.t1 |
| chr4.3 | CDS | 29683093 | 29683161 | 29683093 | ID=cds.MS.gene045529.t1;Parent=MS.gene045529.t1 |
| chr4.3 | exon | 29683234 | 29683360 | 29683234 | ID=MS.gene045529.t1.exon14;Parent=MS.gene045529.t1 |
| chr4.3 | CDS | 29683234 | 29683360 | 29683234 | ID=cds.MS.gene045529.t1;Parent=MS.gene045529.t1 |
| chr4.3 | exon | 29683568 | 29683682 | 29683568 | ID=MS.gene045529.t1.exon15;Parent=MS.gene045529.t1 |
| chr4.3 | CDS | 29683568 | 29683682 | 29683568 | ID=cds.MS.gene045529.t1;Parent=MS.gene045529.t1 |
| chr4.3 | exon | 29683817 | 29684007 | 29683817 | ID=MS.gene045529.t1.exon16;Parent=MS.gene045529.t1 |
| chr4.3 | CDS | 29683817 | 29684007 | 29683817 | ID=cds.MS.gene045529.t1;Parent=MS.gene045529.t1 |
| chr4.3 | exon | 29684099 | 29684211 | 29684099 | ID=MS.gene045529.t1.exon17;Parent=MS.gene045529.t1 |
| chr4.3 | CDS | 29684099 | 29684211 | 29684099 | ID=cds.MS.gene045529.t1;Parent=MS.gene045529.t1 |
| Gene Sequence |
| Protein sequence |
