AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene046437

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene046437.t1 MTR_2g445230 95.122 287 8 1 10 290 1 287 0.0 548
MS.gene046437.t1 MTR_4g124560 30.112 269 163 6 14 282 96 339 1.31e-24 101
MS.gene046437.t1 MTR_2g093050 30.769 273 148 8 29 283 91 340 4.15e-23 98.6
MS.gene046437.t1 MTR_4g024850 28.148 270 156 7 23 279 90 334 5.18e-22 94.4
MS.gene046437.t1 MTR_4g111780 28.148 270 156 8 23 279 90 334 2.33e-21 92.8
MS.gene046437.t1 MTR_1g102670 33.333 183 106 4 21 200 87 256 2.57e-17 80.9
MS.gene046437.t1 MTR_4g062540 28.821 229 125 8 23 245 90 286 7.27e-12 65.1
MS.gene046437.t1 MTR_4g062540 28.448 232 129 8 23 245 90 293 2.05e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene046437.t1 AT5G57450 51.408 284 115 5 21 282 20 302 7.08e-93 277
MS.gene046437.t1 AT5G57450 51.408 284 115 5 21 282 20 302 7.08e-93 277
MS.gene046437.t1 AT5G20850 31.461 267 156 7 14 279 97 337 2.12e-25 103
MS.gene046437.t1 AT5G20850 34.375 192 114 4 14 204 97 277 4.15e-22 94.4
MS.gene046437.t1 AT3G22880 30.534 262 150 7 21 279 107 339 1.34e-21 93.2
MS.gene046437.t1 AT2G45280 28.571 238 132 6 21 242 104 319 1.77e-20 90.5
MS.gene046437.t1 AT2G28560 30.303 264 153 8 29 279 59 304 2.06e-20 90.1
MS.gene046437.t1 AT2G28560 30.303 264 153 8 29 279 91 336 2.37e-20 90.1
MS.gene046437.t1 AT2G28560 30.303 264 153 8 29 279 91 336 2.37e-20 90.1
MS.gene046437.t1 AT2G28560 30.303 264 153 8 29 279 91 336 2.37e-20 90.1
MS.gene046437.t1 AT2G45280 28.571 238 132 6 21 242 128 343 2.58e-20 90.1
MS.gene046437.t1 AT2G28560 30.303 264 153 8 29 279 91 336 4.22e-20 89.4
MS.gene046437.t1 AT3G22880 30.279 251 143 7 21 268 107 328 3.69e-19 86.3
MS.gene046437.t1 AT2G28560 33.898 177 99 5 29 199 59 223 1.05e-15 75.5
MS.gene046437.t1 AT1G07745 35.252 139 76 5 23 157 72 200 5.98e-11 61.2

Find 88 sgRNAs with CRISPR-Local

Find 103 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAGGAAATTGAGAACATTT+AGG 0.234968 2.2:+32470160 MS.gene046437:CDS
TAGGAAATTGAGAACATTTA+GGG 0.270441 2.2:+32470161 MS.gene046437:CDS
TTCTTGTCGAGGGAGGAATT+TGG 0.275226 2.2:+32470129 MS.gene046437:CDS
TCTTGTCGAGGGAGGAATTT+GGG 0.281757 2.2:+32470130 MS.gene046437:CDS
AGGAATTTGGGGAGGGTAGT+AGG 0.294515 2.2:+32470142 MS.gene046437:CDS
TAGAAGGGTTTGTCCTGCTT+TGG 0.300290 2.2:+32470071 MS.gene046437:CDS
TGTTCTGAGTTTGTTATTAC+AGG 0.311721 2.2:+32470213 MS.gene046437:CDS
AGAAGGGTTTGTCCTGCTTT+GGG 0.315397 2.2:+32470072 MS.gene046437:CDS
AAACGTTGGCGGAGAGGTTT+GGG 0.342466 2.2:+32469956 MS.gene046437:CDS
AAAACGTTGGCGGAGAGGTT+TGG 0.344119 2.2:+32469955 MS.gene046437:CDS
ACTTGTATTCCTCGGGTAGA+AGG 0.352847 2.2:+32470055 MS.gene046437:CDS
GAGAGGGTCAGTTCCCATTC+CGG 0.365288 2.2:-32469716 None:intergenic
AGAATGAAGGTCTGAGGATT+GGG 0.369884 2.2:+32470022 MS.gene046437:CDS
AGAGGGTCAGTTCCCATTCC+GGG 0.374502 2.2:-32469715 None:intergenic
GGTTGTGGTTGTTACAAATC+AGG 0.380826 2.2:+32469981 MS.gene046437:CDS
TCCTGCTTTGGGTTTGTCAT+GGG 0.385886 2.2:+32470083 MS.gene046437:CDS
TCCGCTTTCGGCGACGAGTT+CGG 0.394080 2.2:-32469536 None:intergenic
ACAACCTACGCTGCATTTCT+CGG 0.395622 2.2:-32469464 None:intergenic
GTCCTGCTTTGGGTTTGTCA+TGG 0.398382 2.2:+32470082 MS.gene046437:CDS
TCAACTACGATAACTCTAAC+AGG 0.405318 2.2:-32469838 None:intergenic
GGAGAGGTTTGGGTTGGTTG+TGG 0.408109 2.2:+32469966 MS.gene046437:CDS
GCGGATGGGGAAAGGGTATT+CGG 0.409787 2.2:-32469653 None:intergenic
GAGTTGTTTGAGGCGGCGGA+TGG 0.425263 2.2:-32469668 None:intergenic
GAGAATGAAGGTCTGAGGAT+TGG 0.442692 2.2:+32470021 MS.gene046437:CDS
GCGGAGAGGCCGCCGTGGGA+GGG 0.444564 2.2:-32469610 None:intergenic
GAGTTTGTTATTACAGGTGC+AGG 0.446077 2.2:+32470219 MS.gene046437:CDS
TGAATTTGAAAACTCTATGT+TGG 0.454312 2.2:+32469885 MS.gene046437:CDS
GCGAGGCAGCGATCAAGAAC+GGG 0.454625 2.2:-32469487 None:intergenic
CTCGTCGCCGAAAGCGGAAG+CGG 0.460895 2.2:+32469541 MS.gene046437:CDS
TTGAGGCGGCGGATGGGGAA+AGG 0.465846 2.2:-32469661 None:intergenic
GAGCCATGAGAACGAGTTGA+AGG 0.475655 2.2:-32469579 None:intergenic
GTGAGTAAAATCTCAATGTC+AGG 0.480727 2.2:-32469793 None:intergenic
GTTGTTTGAGGCGGCGGATG+GGG 0.483903 2.2:-32469666 None:intergenic
TGAGGCGGCGGATGGGGAAA+GGG 0.485959 2.2:-32469660 None:intergenic
AGTTGTTTGAGGCGGCGGAT+GGG 0.487558 2.2:-32469667 None:intergenic
CTCTCATCTAATCCCGGAAT+GGG 0.488251 2.2:+32469703 MS.gene046437:CDS
GGGAGAGTTGTTTGAGGCGG+CGG 0.494929 2.2:-32469672 None:intergenic
TTCTAGAATCTTCTTGTCGA+GGG 0.500424 2.2:+32470119 MS.gene046437:CDS
TCAGGTAGTTGATTTGATTG+AGG 0.500515 2.2:+32469999 MS.gene046437:CDS
GAGAGGCCGCCGTGGGAGGG+TGG 0.504686 2.2:-32469607 None:intergenic
CTTGTATTCCTCGGGTAGAA+GGG 0.514483 2.2:+32470056 MS.gene046437:CDS
TTTAGTGACTTGTATTCCTC+GGG 0.514857 2.2:+32470048 MS.gene046437:CDS
CCTCTCATCTAATCCCGGAA+TGG 0.515504 2.2:+32469702 MS.gene046437:CDS
GGCGAGGCAGCGATCAAGAA+CGG 0.516398 2.2:-32469488 None:intergenic
TGGTGGCTTGAAAACGTTGG+CGG 0.526981 2.2:+32469945 MS.gene046437:CDS
CTTGTCGAGGGAGGAATTTG+GGG 0.532305 2.2:+32470131 MS.gene046437:CDS
GATTTGATTGAGGAGAATGA+AGG 0.533385 2.2:+32470009 MS.gene046437:CDS
CTGCCTTCAACTCGTTCTCA+TGG 0.539110 2.2:+32469576 MS.gene046437:CDS
ACCGAACTCGTCGCCGAAAG+CGG 0.541419 2.2:+32469535 MS.gene046437:CDS
TTGGTGTAGATATGGGTCAA+AGG 0.554870 2.2:+32470247 MS.gene046437:CDS
GCCCATGACAAACCCAAAGC+AGG 0.556230 2.2:-32470084 None:intergenic
GAACAACATTGAGGTAAATG+AGG 0.557737 2.2:-32470195 None:intergenic
TCTTTCCTCTCATCTAATCC+CGG 0.562941 2.2:+32469697 MS.gene046437:CDS
AGCGGAGAGGCCGCCGTGGG+AGG 0.563631 2.2:-32469611 None:intergenic
TTGTGGGGATGCCGCCGGCG+AGG 0.565361 2.2:-32469504 None:intergenic
GTTGGCGGAGAGGTTTGGGT+TGG 0.566051 2.2:+32469960 MS.gene046437:CDS
GTTCTTGATCGCTGCCTCGC+CGG 0.566580 2.2:+32469490 MS.gene046437:CDS
TTGAGGAGAATGAAGGTCTG+AGG 0.572056 2.2:+32470016 MS.gene046437:CDS
CCATTCCGGGATTAGATGAG+AGG 0.578429 2.2:-32469702 None:intergenic
GGAGGAAAACGCGGTCGAGA+GGG 0.580748 2.2:-32469732 None:intergenic
TTCTGGTGGCTTGAAAACGT+TGG 0.580761 2.2:+32469942 MS.gene046437:CDS
ATTAGATGAGAGGAAAGAGC+GGG 0.597816 2.2:-32469692 None:intergenic
ATTCTAGAATCTTCTTGTCG+AGG 0.599564 2.2:+32470118 MS.gene046437:CDS
AGCGGGAGAGTTGTTTGAGG+CGG 0.599613 2.2:-32469675 None:intergenic
AAGAGCGGGAGAGTTGTTTG+AGG 0.600193 2.2:-32469678 None:intergenic
TACTCACTTACTGGAAATCG+AGG 0.601914 2.2:+32469809 MS.gene046437:CDS
GCTTGAAAACGTTGGCGGAG+AGG 0.602170 2.2:+32469950 MS.gene046437:CDS
GCTCAGCTTCCACCCTCCCA+CGG 0.602814 2.2:+32469598 MS.gene046437:CDS
CGGAGGAAAACGCGGTCGAG+AGG 0.605398 2.2:-32469733 None:intergenic
GTCGAGGGAGGAATTTGGGG+AGG 0.605528 2.2:+32470134 MS.gene046437:CDS
TAGAATCTTCTTGTCGAGGG+AGG 0.607196 2.2:+32470122 MS.gene046437:CDS
ATGAAGCGGAGAGGCCGCCG+TGG 0.621821 2.2:-32469615 None:intergenic
TGAAGCGGAGAGGCCGCCGT+GGG 0.625174 2.2:-32469614 None:intergenic
CTTGATCGCTGCCTCGCCGG+CGG 0.631545 2.2:+32469493 MS.gene046437:CDS
GTAGATATGGGTCAAAGGAA+TGG 0.632565 2.2:+32470252 MS.gene046437:CDS
AAAACCGAGAAATGCAGCGT+AGG 0.635039 2.2:+32469460 MS.gene046437:CDS
TCGAGGGAGGAATTTGGGGA+GGG 0.635636 2.2:+32470135 MS.gene046437:CDS
ACAAACTCAGAACAACATTG+AGG 0.651504 2.2:-32470204 None:intergenic
GATTAGATGAGAGGAAAGAG+CGG 0.651758 2.2:-32469693 None:intergenic
GAATATGTAGAGTGATGAAG+CGG 0.655313 2.2:-32469629 None:intergenic
CCTCCGCGGAATTTACTCTG+CGG 0.689572 2.2:+32469750 MS.gene046437:CDS
AGGACAAACCCTTCTACCCG+AGG 0.696490 2.2:-32470064 None:intergenic
TGTAGAGTGATGAAGCGGAG+AGG 0.704294 2.2:-32469624 None:intergenic
CCGCAGAGTAAATTCCGCGG+AGG 0.709414 2.2:-32469750 None:intergenic
AAATTCCGCGGAGGAAAACG+CGG 0.710936 2.2:-32469741 None:intergenic
TCTCCGCAGAGTAAATTCCG+CGG 0.737709 2.2:-32469753 None:intergenic
CAATAGCGAGATGAGCACAG+CGG 0.759325 2.2:+32469426 MS.gene046437:CDS
CAGCTTCCACCCTCCCACGG+CGG 0.761661 2.2:+32469601 MS.gene046437:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TAGGAAATTGAGAACATTTA+GGG + chr2.2:32470161-32470180 MS.gene046437:CDS 25.0%
! TGAATTTGAAAACTCTATGT+TGG + chr2.2:32469885-32469904 MS.gene046437:CDS 25.0%
ACCAGAAATCTTGAAAAACA+AGG - chr2.2:32469929-32469948 None:intergenic 30.0%
GTAGGAAATTGAGAACATTT+AGG + chr2.2:32470160-32470179 MS.gene046437:CDS 30.0%
! TTGAGATTTTACTCACTTAC+TGG + chr2.2:32469800-32469819 MS.gene046437:CDS 30.0%
!! TGTTCTGAGTTTGTTATTAC+AGG + chr2.2:32470213-32470232 MS.gene046437:CDS 30.0%
!! TTTTAGTGACTTGTATTCCT+CGG + chr2.2:32470047-32470066 MS.gene046437:CDS 30.0%
!!! TCCTTGTTTTTCAAGATTTC+TGG + chr2.2:32469925-32469944 MS.gene046437:CDS 30.0%
!!! TTGTTTTTCAAGATTTCTGG+TGG + chr2.2:32469928-32469947 MS.gene046437:CDS 30.0%
ACAAACTCAGAACAACATTG+AGG - chr2.2:32470207-32470226 None:intergenic 35.0%
GAACAACATTGAGGTAAATG+AGG - chr2.2:32470198-32470217 None:intergenic 35.0%
GAATATGTAGAGTGATGAAG+CGG - chr2.2:32469632-32469651 None:intergenic 35.0%
GATTTGATTGAGGAGAATGA+AGG + chr2.2:32470009-32470028 MS.gene046437:CDS 35.0%
GTGAGTAAAATCTCAATGTC+AGG - chr2.2:32469796-32469815 None:intergenic 35.0%
TCAACTACGATAACTCTAAC+AGG - chr2.2:32469841-32469860 None:intergenic 35.0%
! TTTAGTGACTTGTATTCCTC+GGG + chr2.2:32470048-32470067 MS.gene046437:CDS 35.0%
!! ATTCTAGAATCTTCTTGTCG+AGG + chr2.2:32470118-32470137 MS.gene046437:CDS 35.0%
!! TCAGGTAGTTGATTTGATTG+AGG + chr2.2:32469999-32470018 MS.gene046437:CDS 35.0%
!! TTCTAGAATCTTCTTGTCGA+GGG + chr2.2:32470119-32470138 MS.gene046437:CDS 35.0%
!!! AGGTGTTTTTGGTGTAGATA+TGG + chr2.2:32470239-32470258 MS.gene046437:CDS 35.0%
!!! GGTGTTTTTGGTGTAGATAT+GGG + chr2.2:32470240-32470259 MS.gene046437:CDS 35.0%
AGAATGAAGGTCTGAGGATT+GGG + chr2.2:32470022-32470041 MS.gene046437:CDS 40.0%
ATTAGATGAGAGGAAAGAGC+GGG - chr2.2:32469695-32469714 None:intergenic 40.0%
GATTAGATGAGAGGAAAGAG+CGG - chr2.2:32469696-32469715 None:intergenic 40.0%
GGTTGTGGTTGTTACAAATC+AGG + chr2.2:32469981-32470000 MS.gene046437:CDS 40.0%
GTAGATATGGGTCAAAGGAA+TGG + chr2.2:32470252-32470271 MS.gene046437:CDS 40.0%
TACTCACTTACTGGAAATCG+AGG + chr2.2:32469809-32469828 MS.gene046437:CDS 40.0%
TCTTTCCTCTCATCTAATCC+CGG + chr2.2:32469697-32469716 MS.gene046437:CDS 40.0%
TTGGTGTAGATATGGGTCAA+AGG + chr2.2:32470247-32470266 MS.gene046437:CDS 40.0%
! ATTACAGGTGCAGGTGTTTT+TGG + chr2.2:32470228-32470247 MS.gene046437:CDS 40.0%
!! GAGTTTGTTATTACAGGTGC+AGG + chr2.2:32470219-32470238 MS.gene046437:CDS 40.0%
!!! AGTTCGGTCACTGATTTTGT+GGG - chr2.2:32469523-32469542 None:intergenic 40.0%
AAAACCGAGAAATGCAGCGT+AGG + chr2.2:32469460-32469479 MS.gene046437:CDS 45.0%
ACAACCTACGCTGCATTTCT+CGG - chr2.2:32469467-32469486 None:intergenic 45.0%
ACTTGTATTCCTCGGGTAGA+AGG + chr2.2:32470055-32470074 MS.gene046437:CDS 45.0%
AGAAGGGTTTGTCCTGCTTT+GGG + chr2.2:32470072-32470091 MS.gene046437:CDS 45.0%
CTCTCATCTAATCCCGGAAT+GGG + chr2.2:32469703-32469722 MS.gene046437:CDS 45.0%
CTTGTATTCCTCGGGTAGAA+GGG + chr2.2:32470056-32470075 MS.gene046437:CDS 45.0%
GAGAATGAAGGTCTGAGGAT+TGG + chr2.2:32470021-32470040 MS.gene046437:CDS 45.0%
TAGAAGGGTTTGTCCTGCTT+TGG + chr2.2:32470071-32470090 MS.gene046437:CDS 45.0%
TAGAATCTTCTTGTCGAGGG+AGG + chr2.2:32470122-32470141 MS.gene046437:CDS 45.0%
TCTTGTCGAGGGAGGAATTT+GGG + chr2.2:32470130-32470149 MS.gene046437:CDS 45.0%
TTCTGGTGGCTTGAAAACGT+TGG + chr2.2:32469942-32469961 MS.gene046437:CDS 45.0%
TTCTTGTCGAGGGAGGAATT+TGG + chr2.2:32470129-32470148 MS.gene046437:CDS 45.0%
TTGAGGAGAATGAAGGTCTG+AGG + chr2.2:32470016-32470035 MS.gene046437:CDS 45.0%
! AGTTTTACCGCTTCCGCTTT+CGG - chr2.2:32469551-32469570 None:intergenic 45.0%
! TCCTGCTTTGGGTTTGTCAT+GGG + chr2.2:32470083-32470102 MS.gene046437:CDS 45.0%
!!! CGCTGCATTTCTCGGTTTTT+TGG - chr2.2:32469459-32469478 None:intergenic 45.0%
!!! GAGTTCGGTCACTGATTTTG+TGG - chr2.2:32469524-32469543 None:intergenic 45.0%
!!! GTTCGGTCACTGATTTTGTG+GGG - chr2.2:32469522-32469541 None:intergenic 45.0%
AAAACGTTGGCGGAGAGGTT+TGG + chr2.2:32469955-32469974 MS.gene046437:CDS 50.0%
AAACGTTGGCGGAGAGGTTT+GGG + chr2.2:32469956-32469975 MS.gene046437:CDS 50.0%
AAATTCCGCGGAGGAAAACG+CGG - chr2.2:32469744-32469763 None:intergenic 50.0%
AAGAGCGGGAGAGTTGTTTG+AGG - chr2.2:32469681-32469700 None:intergenic 50.0%
AGGAATTTGGGGAGGGTAGT+AGG + chr2.2:32470142-32470161 MS.gene046437:CDS 50.0%
CAATAGCGAGATGAGCACAG+CGG + chr2.2:32469426-32469445 MS.gene046437:CDS 50.0%
CCATTCCGGGATTAGATGAG+AGG - chr2.2:32469705-32469724 None:intergenic 50.0%
CCTCTCATCTAATCCCGGAA+TGG + chr2.2:32469702-32469721 MS.gene046437:CDS 50.0%
CTGCCTTCAACTCGTTCTCA+TGG + chr2.2:32469576-32469595 MS.gene046437:CDS 50.0%
CTTGTCGAGGGAGGAATTTG+GGG + chr2.2:32470131-32470150 MS.gene046437:CDS 50.0%
TCTCCGCAGAGTAAATTCCG+CGG - chr2.2:32469756-32469775 None:intergenic 50.0%
TGGTGGCTTGAAAACGTTGG+CGG + chr2.2:32469945-32469964 MS.gene046437:CDS 50.0%
TGTAGAGTGATGAAGCGGAG+AGG - chr2.2:32469627-32469646 None:intergenic 50.0%
! GAGCCATGAGAACGAGTTGA+AGG - chr2.2:32469582-32469601 None:intergenic 50.0%
! GTCCTGCTTTGGGTTTGTCA+TGG + chr2.2:32470082-32470101 MS.gene046437:CDS 50.0%
AGAGGGTCAGTTCCCATTCC+GGG - chr2.2:32469718-32469737 None:intergenic 55.0%
AGCGGGAGAGTTGTTTGAGG+CGG - chr2.2:32469678-32469697 None:intergenic 55.0%
AGGACAAACCCTTCTACCCG+AGG - chr2.2:32470067-32470086 None:intergenic 55.0%
CCTCCGCGGAATTTACTCTG+CGG + chr2.2:32469750-32469769 MS.gene046437:CDS 55.0%
GAGAGGGTCAGTTCCCATTC+CGG - chr2.2:32469719-32469738 None:intergenic 55.0%
GCCCATGACAAACCCAAAGC+AGG - chr2.2:32470087-32470106 None:intergenic 55.0%
GCTTGAAAACGTTGGCGGAG+AGG + chr2.2:32469950-32469969 MS.gene046437:CDS 55.0%
TCGAGGGAGGAATTTGGGGA+GGG + chr2.2:32470135-32470154 MS.gene046437:CDS 55.0%
! AGTTGTTTGAGGCGGCGGAT+GGG - chr2.2:32469670-32469689 None:intergenic 55.0%
! TGATTTTGTGGGGATGCCGC+CGG - chr2.2:32469512-32469531 None:intergenic 55.0%
!! GCGGATGGGGAAAGGGTATT+CGG - chr2.2:32469656-32469675 None:intergenic 55.0%
!! GGAGAGGTTTGGGTTGGTTG+TGG + chr2.2:32469966-32469985 MS.gene046437:CDS 55.0%
ACCGAACTCGTCGCCGAAAG+CGG + chr2.2:32469535-32469554 MS.gene046437:CDS 60.0%
CCGCAGAGTAAATTCCGCGG+AGG - chr2.2:32469753-32469772 None:intergenic 60.0%
GCGAGGCAGCGATCAAGAAC+GGG - chr2.2:32469490-32469509 None:intergenic 60.0%
GGAGGAAAACGCGGTCGAGA+GGG - chr2.2:32469735-32469754 None:intergenic 60.0%
GGCGAGGCAGCGATCAAGAA+CGG - chr2.2:32469491-32469510 None:intergenic 60.0%
GTCGAGGGAGGAATTTGGGG+AGG + chr2.2:32470134-32470153 MS.gene046437:CDS 60.0%
GTTCTTGATCGCTGCCTCGC+CGG + chr2.2:32469490-32469509 MS.gene046437:CDS 60.0%
GTTGGCGGAGAGGTTTGGGT+TGG + chr2.2:32469960-32469979 MS.gene046437:CDS 60.0%
TCCGCTTTCGGCGACGAGTT+CGG - chr2.2:32469539-32469558 None:intergenic 60.0%
! GAGTTGTTTGAGGCGGCGGA+TGG - chr2.2:32469671-32469690 None:intergenic 60.0%
! GGGAGAGTTGTTTGAGGCGG+CGG - chr2.2:32469675-32469694 None:intergenic 60.0%
! GTTGTTTGAGGCGGCGGATG+GGG - chr2.2:32469669-32469688 None:intergenic 60.0%
CGGAGGAAAACGCGGTCGAG+AGG - chr2.2:32469736-32469755 None:intergenic 65.0%
CTCGTCGCCGAAAGCGGAAG+CGG + chr2.2:32469541-32469560 MS.gene046437:CDS 65.0%
GCTCAGCTTCCACCCTCCCA+CGG + chr2.2:32469598-32469617 MS.gene046437:CDS 65.0%
TGAGGCGGCGGATGGGGAAA+GGG - chr2.2:32469663-32469682 None:intergenic 65.0%
TTGAGGCGGCGGATGGGGAA+AGG - chr2.2:32469664-32469683 None:intergenic 65.0%
! CTCGACCGCGTTTTCCTCCG+CGG + chr2.2:32469736-32469755 MS.gene046437:CDS 65.0%
ATGAAGCGGAGAGGCCGCCG+TGG - chr2.2:32469618-32469637 None:intergenic 70.0%
CAGCTTCCACCCTCCCACGG+CGG + chr2.2:32469601-32469620 MS.gene046437:CDS 70.0%
CTTGATCGCTGCCTCGCCGG+CGG + chr2.2:32469493-32469512 MS.gene046437:CDS 70.0%
TGAAGCGGAGAGGCCGCCGT+GGG - chr2.2:32469617-32469636 None:intergenic 70.0%
TTGTGGGGATGCCGCCGGCG+AGG - chr2.2:32469507-32469526 None:intergenic 75.0%
! AGCGGAGAGGCCGCCGTGGG+AGG - chr2.2:32469614-32469633 None:intergenic 80.0%
! GAGAGGCCGCCGTGGGAGGG+TGG - chr2.2:32469610-32469629 None:intergenic 80.0%
! GCGGAGAGGCCGCCGTGGGA+GGG - chr2.2:32469613-32469632 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 32469409 32470281 32469409 ID=MS.gene046437
chr2.2 mRNA 32469409 32470281 32469409 ID=MS.gene046437.t1;Parent=MS.gene046437
chr2.2 exon 32469409 32470281 32469409 ID=MS.gene046437.t1.exon1;Parent=MS.gene046437.t1
chr2.2 CDS 32469409 32470281 32469409 ID=cds.MS.gene046437.t1;Parent=MS.gene046437.t1
Gene Sequence

>MS.gene046437

ATGAACGATCACAATCACAATAGCGAGATGAGCACAGCGGCGCAGAACCAAAAAACCGAGAAATGCAGCGTAGGTTGTCCCGTTCTTGATCGCTGCCTCGCCGGCGGCATCCCCACAAAATCAGTGACCGAACTCGTCGCCGAAAGCGGAAGCGGTAAAACTCAAATCTGCCTTCAACTCGTTCTCATGGCTCAGCTTCCACCCTCCCACGGCGGCCTCTCCGCTTCATCACTCTACATATTCACCGAATACCCTTTCCCCATCCGCCGCCTCAAACAACTCTCCCGCTCTTTCCTCTCATCTAATCCCGGAATGGGAACTGACCCTCTCGACCGCGTTTTCCTCCGCGGAATTTACTCTGCGGAGAAATTCGTTGAATTTTTACCTGACATTGAGATTTTACTCACTTACTGGAAATCGAGGTTGCGTCCTGTTAGAGTTATCGTAGTTGATTCTATTGCTGCTTTGTTTAGATCTGAATTTGAAAACTCTATGTTGGATCTTAAACGTAGATCGTCCTTGTTTTTCAAGATTTCTGGTGGCTTGAAAACGTTGGCGGAGAGGTTTGGGTTGGTTGTGGTTGTTACAAATCAGGTAGTTGATTTGATTGAGGAGAATGAAGGTCTGAGGATTGGGAATTTTAGTGACTTGTATTCCTCGGGTAGAAGGGTTTGTCCTGCTTTGGGTTTGTCATGGGCTAATTGTGTGAATTCTAGAATCTTCTTGTCGAGGGAGGAATTTGGGGAGGGTAGTAGGAAATTGAGAACATTTAGGGTTGTTTTTGCTCCTCATTTACCTCAATGTTGTTCTGAGTTTGTTATTACAGGTGCAGGTGTTTTTGGTGTAGATATGGGTCAAAGGAATGGTGTATGA
Protein sequence

>MS.gene046437.t1

MNDHNHNSEMSTAAQNQKTEKCSVGCPVLDRCLAGGIPTKSVTELVAESGSGKTQICLQLVLMAQLPPSHGGLSASSLYIFTEYPFPIRRLKQLSRSFLSSNPGMGTDPLDRVFLRGIYSAEKFVEFLPDIEILLTYWKSRLRPVRVIVVDSIAALFRSEFENSMLDLKRRSSLFFKISGGLKTLAERFGLVVVVTNQVVDLIEENEGLRIGNFSDLYSSGRRVCPALGLSWANCVNSRIFLSREEFGEGSRKLRTFRVVFAPHLPQCCSEFVITGAGVFGVDMGQRNGV