AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene047660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047660.t1 MTR_5g017790 95.430 547 24 1 1 547 1 546 0.0 1024
MS.gene047660.t1 MTR_5g017790 95.701 535 22 1 13 547 1 534 0.0 1003
MS.gene047660.t1 MTR_5g017790 93.917 411 24 1 1 411 1 410 0.0 735
MS.gene047660.t1 MTR_8g079840 67.554 601 137 9 1 547 1 597 0.0 713
MS.gene047660.t1 MTR_8g079840 65.538 502 115 9 1 448 1 498 0.0 542
MS.gene047660.t1 MTR_3g101340 53.096 533 221 14 25 545 22 537 3.16e-164 478
MS.gene047660.t1 MTR_3g101340 53.184 534 220 15 25 545 47 563 9.13e-164 477
MS.gene047660.t1 MTR_3g101340 52.311 541 221 14 25 545 47 570 7.75e-163 475
MS.gene047660.t1 MTR_1g021040 53.420 541 209 12 33 544 18 544 1.32e-160 469
MS.gene047660.t1 MTR_4g058015 31.497 581 322 15 33 545 117 689 3.67e-80 265
MS.gene047660.t1 MTR_5g079910 31.826 553 279 12 33 545 15 509 5.83e-74 244
MS.gene047660.t1 MTR_8g078760 24.958 601 367 15 10 545 39 620 7.67e-43 162
MS.gene047660.t1 MTR_5g018820 24.370 595 364 11 12 545 49 618 6.10e-42 159
MS.gene047660.t1 MTR_5g012790 26.958 549 333 12 24 544 74 582 7.93e-41 156
MS.gene047660.t1 MTR_4g068920 25.581 516 321 11 83 545 123 628 6.07e-33 133
MS.gene047660.t1 MTR_5g079910 27.296 392 192 11 33 386 15 351 7.48e-24 103
MS.gene047660.t1 MTR_8g078760 22.727 506 312 14 10 450 39 530 1.85e-21 98.2
MS.gene047660.t1 MTR_3g073590 30.693 202 127 6 300 495 565 759 4.04e-18 88.6
MS.gene047660.t1 MTR_5g061340 27.700 213 145 5 300 508 738 945 1.28e-17 87.0
MS.gene047660.t1 MTR_8g033290 28.571 175 118 4 333 504 418 588 2.03e-13 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047660.t1 AT4G37080 57.621 597 189 11 6 547 23 610 0.0 618
MS.gene047660.t1 AT4G37080 57.621 597 189 11 6 547 23 610 0.0 618
MS.gene047660.t1 AT4G37080 57.841 593 186 11 10 547 14 597 0.0 617
MS.gene047660.t1 AT4G37080 55.020 498 160 11 6 448 23 511 2.50e-157 459
MS.gene047660.t1 AT5G42690 50.954 524 211 12 32 544 22 510 7.60e-151 442
MS.gene047660.t1 AT5G42690 50.864 521 215 11 32 544 49 536 1.23e-150 443
MS.gene047660.t1 AT5G42690 50.954 524 211 12 32 544 49 537 2.00e-150 442
MS.gene047660.t1 AT5G42690 50.954 524 211 12 32 544 49 537 2.00e-150 442
MS.gene047660.t1 AT5G42690 50.677 517 215 11 36 544 1 485 4.27e-148 434
MS.gene047660.t1 AT2G39690 32.058 549 293 15 34 545 18 523 7.34e-72 239
MS.gene047660.t1 AT2G39690 32.342 538 284 15 45 545 3 497 9.35e-72 238
MS.gene047660.t1 AT2G39690 32.110 545 297 14 34 545 18 522 1.33e-71 238
MS.gene047660.t1 AT2G39690 39.755 327 160 7 250 545 96 416 1.49e-71 235
MS.gene047660.t1 AT2G39690 32.397 534 288 14 45 545 3 496 1.63e-71 237
MS.gene047660.t1 AT3G12540 29.860 499 277 8 83 545 42 503 1.26e-65 222
MS.gene047660.t1 AT3G12540 29.061 554 315 11 31 545 56 570 6.72e-65 221
MS.gene047660.t1 AT5G60720 29.706 579 285 17 78 545 122 689 6.38e-57 202
MS.gene047660.t1 AT1G16750 39.231 260 143 5 296 544 271 526 1.86e-48 176
MS.gene047660.t1 AT5G47380 25.849 530 340 12 35 544 89 585 6.51e-46 170
MS.gene047660.t1 AT5G47380 25.400 563 364 13 2 544 3 529 6.78e-46 169
MS.gene047660.t1 AT5G47380 25.849 530 340 12 35 544 89 585 7.84e-46 170
MS.gene047660.t1 AT3G13000 27.337 567 313 14 35 544 49 573 3.36e-44 165
MS.gene047660.t1 AT3G13000 27.337 567 313 14 35 544 49 573 3.36e-44 165
MS.gene047660.t1 AT3G13000 27.337 567 313 14 35 544 20 544 3.42e-44 165
MS.gene047660.t1 AT2G39690 30.000 450 237 14 34 448 18 424 4.33e-40 151
MS.gene047660.t1 AT2G39690 30.045 446 241 13 34 448 18 423 8.06e-40 150
MS.gene047660.t1 AT2G23700 31.692 325 186 8 249 545 385 701 1.42e-37 147
MS.gene047660.t1 AT5G66600 25.220 567 335 16 37 545 19 554 6.30e-34 135
MS.gene047660.t1 AT5G66600 25.220 567 335 16 37 545 53 588 7.27e-34 136
MS.gene047660.t1 AT5G66600 25.044 567 336 16 37 545 73 608 1.01e-33 135
MS.gene047660.t1 AT5G66600 25.044 567 336 16 37 545 73 608 1.01e-33 135
MS.gene047660.t1 AT5G66600 25.044 567 336 16 37 545 73 608 1.01e-33 135
MS.gene047660.t1 AT5G66600 25.044 567 336 16 37 545 73 608 1.01e-33 135
MS.gene047660.t1 AT5G66600 25.044 567 336 16 37 545 73 608 1.01e-33 135
MS.gene047660.t1 AT3G18900 31.847 314 179 11 249 545 235 530 4.87e-31 127
MS.gene047660.t1 AT3G18900 31.847 314 179 11 249 545 230 525 6.01e-31 126
MS.gene047660.t1 AT3G18900 31.190 311 185 9 249 545 154 449 1.23e-30 124
MS.gene047660.t1 AT3G18900 31.190 311 185 9 249 545 154 449 1.23e-30 124
MS.gene047660.t1 AT2G39690 28.718 390 210 12 45 403 3 355 1.69e-30 123
MS.gene047660.t1 AT5G47380 25.229 436 274 11 35 451 89 491 1.03e-29 122
MS.gene047660.t1 AT5G47380 25.231 432 271 11 35 447 89 487 4.90e-29 120
MS.gene047660.t1 AT1G76620 27.246 334 195 9 250 545 193 516 8.90e-29 120
MS.gene047660.t1 AT1G43020 28.797 316 190 12 242 546 144 435 3.90e-27 114
MS.gene047660.t1 AT1G21060 28.221 326 204 8 242 547 178 493 1.84e-25 110
MS.gene047660.t1 AT1G21060 28.221 326 204 8 242 547 190 505 2.02e-25 110
MS.gene047660.t1 AT1G16750 39.516 124 73 1 284 405 259 382 3.44e-21 96.3
MS.gene047660.t1 AT5G66600 24.681 470 268 14 37 448 73 514 4.57e-21 97.1
MS.gene047660.t1 AT5G66600 24.681 470 268 14 37 448 73 514 4.57e-21 97.1
MS.gene047660.t1 AT5G66600 24.681 470 268 14 37 448 73 514 4.57e-21 97.1
MS.gene047660.t1 AT5G66600 24.681 470 268 14 37 448 73 514 4.57e-21 97.1
MS.gene047660.t1 AT4G08550 26.446 242 168 4 302 541 402 635 1.99e-19 92.4
MS.gene047660.t1 AT4G08550 26.446 242 168 4 302 541 456 689 2.48e-19 92.4
MS.gene047660.t1 AT3G11920 29.756 205 139 5 302 504 393 594 7.22e-17 84.3
MS.gene047660.t1 AT5G66600 24.096 415 239 12 37 400 19 408 2.34e-16 82.0
MS.gene047660.t1 AT5G66600 24.096 415 239 12 37 400 73 462 3.57e-16 81.6
MS.gene047660.t1 AT5G66600 24.096 415 239 12 37 400 73 462 3.57e-16 81.6
MS.gene047660.t1 AT5G66600 24.096 415 239 12 37 400 73 462 3.57e-16 81.6
MS.gene047660.t1 AT3G18900 31.132 212 124 7 249 448 235 436 1.72e-14 76.3
MS.gene047660.t1 AT1G43020 28.372 215 127 9 242 447 144 340 3.90e-14 74.3
MS.gene047660.t1 AT3G18900 31.410 156 96 3 249 400 235 383 1.62e-12 69.7
MS.gene047660.t1 AT1G76620 25.738 237 132 8 250 448 193 423 1.94e-11 66.6

Find 108 sgRNAs with CRISPR-Local

Find 223 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTAAATTGTCCTTGAATA+TGG 0.173375 5.3:-10069721 None:intergenic
TCTAGTAGAAAGTTAGTAAA+TGG 0.182205 5.3:+10069325 MS.gene047660:CDS
GACATGTCCAGGTTCTTATT+TGG 0.182287 5.3:+10069967 MS.gene047660:intron
TGCCCTATGATTTCAGTTTC+AGG 0.214439 5.3:+10071704 MS.gene047660:CDS
ACCAGGAGAAACTTGCATTT+TGG 0.214979 5.3:+10070025 MS.gene047660:CDS
ATGAAAGCAAGAGGCATATT+TGG 0.216429 5.3:+10070750 MS.gene047660:CDS
TGGATCCTTTGATGGAATTC+TGG 0.239508 5.3:-10069219 None:intergenic
TCCATATTCAAGGACAATTT+AGG 0.245498 5.3:+10069720 MS.gene047660:CDS
GGCACCAATATCTCTTGTTT+TGG 0.267194 5.3:-10069790 None:intergenic
ATATCCTCTGAAACTCTATT+TGG 0.284459 5.3:-10069663 None:intergenic
CTTGGAATCTTTGTTGGATT+GGG 0.291306 5.3:+10071588 MS.gene047660:CDS
CTCTTCTGGTATTGATGATA+AGG 0.304077 5.3:-10069374 None:intergenic
ACATGTCCAGGTTCTTATTT+GGG 0.320441 5.3:+10069968 MS.gene047660:intron
GAAATCTATTGAAAAGAAAA+TGG 0.326415 5.3:+10069396 MS.gene047660:CDS
CTTGTCAGCTGATTCTTGTT+TGG 0.329258 5.3:-10069452 None:intergenic
AGCAAGAGGCATATTTGGTT+TGG 0.336129 5.3:+10070755 MS.gene047660:CDS
TTTCAGACAAGGTTTATATC+AGG 0.354150 5.3:+10069141 MS.gene047660:CDS
AGAGCACTCACTAGACCTTT+AGG 0.357274 5.3:+10068850 MS.gene047660:CDS
TATGAGAATTTCCATATTCA+AGG 0.365612 5.3:+10069710 MS.gene047660:CDS
AGCAAAGAGAGATTATTTAC+AGG 0.366908 5.3:+10071486 MS.gene047660:CDS
TTGATGTTTGGATCCTTTGA+TGG 0.368156 5.3:-10069227 None:intergenic
ATCAGTGCTACAACCATTTC+AGG 0.373611 5.3:-10070266 None:intergenic
AAAAGGAGGGAGCAGGAAAA+TGG 0.374679 5.3:+10068621 MS.gene047660:CDS
GCTGCCTTCCCCTTCTTTCA+AGG 0.376152 5.3:-10071657 None:intergenic
CAACCTGAAACTGAAATCAT+AGG 0.378498 5.3:-10071707 None:intergenic
CAGAGCACACACCACTCTTC+AGG 0.383282 5.3:+10067992 MS.gene047660:CDS
AATCTCACAAAAGCTATTGT+AGG 0.383665 5.3:-10069811 None:intergenic
AAGCAGGAAAAGATGGAAAA+AGG 0.383928 5.3:+10068604 MS.gene047660:intron
ATATCCAAAACAAGAGATAT+TGG 0.385180 5.3:+10069786 MS.gene047660:CDS
ACTTGGAATCTTTGTTGGAT+TGG 0.390859 5.3:+10071587 MS.gene047660:CDS
CGTGGCTGAAGTTGCGGTAT+TGG 0.393024 5.3:+10069081 MS.gene047660:CDS
TTTGGAATGGTCTGAACCTT+TGG 0.394809 5.3:+10070773 MS.gene047660:CDS
CTTTCTACTAGAAACACTTC+TGG 0.401440 5.3:-10069314 None:intergenic
TTGGTTGGTGATTTCTTCAC+TGG 0.405802 5.3:-10069433 None:intergenic
GATATTGAACAGATACCATA+TGG 0.414029 5.3:-10069768 None:intergenic
AAAGGACTTGGAATCTTTGT+TGG 0.415429 5.3:+10071582 MS.gene047660:CDS
TCAGCTGATTCTTGTTTGGT+TGG 0.420192 5.3:-10069448 None:intergenic
AGGGCGTCGAGAAAGGAAAA+TGG 0.421258 5.3:+10068666 MS.gene047660:CDS
ACAAAATTCCTCAGATGATA+AGG 0.423083 5.3:+10069617 MS.gene047660:CDS
CTAGTAGAAAGTTAGTAAAT+GGG 0.423941 5.3:+10069326 MS.gene047660:CDS
GCTTCCTTTCTCAGTTCAAC+AGG 0.438309 5.3:-10071625 None:intergenic
TGCAGATCACGTGAAGTTGC+AGG 0.442494 5.3:+10069477 MS.gene047660:CDS
CTTACATAATTCAAGTGATA+AGG 0.444130 5.3:-10070572 None:intergenic
TCCAAAATGCAAGTTTCTCC+TGG 0.448612 5.3:-10070026 None:intergenic
TGCAGGTTGATAAGTTAAAG+AGG 0.463381 5.3:+10068788 MS.gene047660:intron
CAGTTGAATGCCTTGAAAGA+AGG 0.473839 5.3:+10071647 MS.gene047660:CDS
TTGCACTATCTTGTGGAAGC+TGG 0.481719 5.3:+10070802 MS.gene047660:CDS
ATGTGCAAAGCAGGAAAAGA+TGG 0.484944 5.3:+10068597 MS.gene047660:intron
ACTTGCCTCTGTGAAGTTGA+AGG 0.488190 5.3:+10069993 MS.gene047660:CDS
ACTCGACTTTGCAAAGGACT+TGG 0.489476 5.3:+10071570 MS.gene047660:CDS
ACACCTCCACGCGATCCATA+TGG 0.493061 5.3:+10069753 MS.gene047660:CDS
TTGATGGAATTCTGGTCCAT+CGG 0.493905 5.3:-10069211 None:intergenic
CTTACATGGGAAGGGAGATA+AGG 0.496981 5.3:-10068892 None:intergenic
TGATGGAATTCTGGTCCATC+GGG 0.498652 5.3:-10069210 None:intergenic
GGCTGAAGTTGCGGTATTGG+AGG 0.504477 5.3:+10069084 MS.gene047660:CDS
GTTACATTTGCACTATCTTG+TGG 0.506373 5.3:+10070795 MS.gene047660:CDS
AGTTGAATGCCTTGAAAGAA+GGG 0.509505 5.3:+10071648 MS.gene047660:CDS
ACAACCATTTCAGGACTCTC+AGG 0.512777 5.3:-10070257 None:intergenic
GAGGCATATTTGGTTTGGAA+TGG 0.523893 5.3:+10070760 MS.gene047660:CDS
GGGAGATAAGGAGGAAGACG+AGG 0.525815 5.3:-10068880 None:intergenic
GGTAGTTCGATTAGAAGAGA+AGG 0.529827 5.3:+10069111 MS.gene047660:CDS
GCTACCTGTTGAACTGAGAA+AGG 0.530299 5.3:+10071621 MS.gene047660:CDS
TTTCATTCGGTTGAAATCAA+CGG 0.530335 5.3:-10069844 None:intergenic
CTTAATCTACTTACATGGGA+AGG 0.531642 5.3:-10068901 None:intergenic
GATTATTTACAGGCAGCAGT+TGG 0.534652 5.3:+10071496 MS.gene047660:CDS
TAATTCCAAAGATACTTGAC+TGG 0.540269 5.3:+10071542 MS.gene047660:CDS
GTATCTTACATTCATCATAC+AGG 0.540740 5.3:-10070064 None:intergenic
CATACCTGAGAGTCCTGAAA+TGG 0.549579 5.3:+10070253 MS.gene047660:CDS
TCGGTTGAAATCAACGGTGG+AGG 0.556026 5.3:-10069838 None:intergenic
TGGTGATTTCTTCACTGGAG+TGG 0.560430 5.3:-10069428 None:intergenic
AACCTGAAACTGAAATCATA+GGG 0.561621 5.3:-10071706 None:intergenic
TTGTAGGCATATTTAGAGCA+TGG 0.564337 5.3:+10070230 MS.gene047660:intron
TGACAGGCCACAATAGTAGT+GGG 0.565218 5.3:+10070500 MS.gene047660:intron
AGTTGCGGTATTGGAGGAAG+AGG 0.573287 5.3:+10069090 MS.gene047660:CDS
AGACGAGGAAGTGCTCCTAA+AGG 0.579607 5.3:-10068865 None:intergenic
AGAAAATTCGATTGACCCGA+TGG 0.580147 5.3:+10069195 MS.gene047660:CDS
TCAGTTCAACAGGTAGCTGA+AGG 0.581607 5.3:-10071615 None:intergenic
ATATGTACCATGTGTGAAAG+AGG 0.585157 5.3:-10071679 None:intergenic
AGAGCTCGTGGCTGAAGTTG+CGG 0.588350 5.3:+10069075 MS.gene047660:CDS
CAGATACCATATGGATCGCG+TGG 0.591443 5.3:-10069759 None:intergenic
CACACCAAATAGAGTTTCAG+AGG 0.591852 5.3:+10069659 MS.gene047660:CDS
GTGACAGGCCACAATAGTAG+TGG 0.594519 5.3:+10070499 MS.gene047660:intron
CTTGCCTCTGTGAAGTTGAA+GGG 0.595327 5.3:+10069994 MS.gene047660:CDS
AATGATGAGATGAAAGCAAG+AGG 0.596232 5.3:+10070741 MS.gene047660:CDS
TTAATCTACTTACATGGGAA+GGG 0.597323 5.3:-10068900 None:intergenic
CTGTCTACATTTCCTCCAAG+AGG 0.607010 5.3:+10069167 MS.gene047660:CDS
ATGGACCAGAATTCCATCAA+AGG 0.609091 5.3:+10069214 MS.gene047660:CDS
TCAAAGGATCCAAACATCAA+AGG 0.609297 5.3:+10069230 MS.gene047660:CDS
TTCTAACACCTTATCATCTG+AGG 0.614175 5.3:-10069625 None:intergenic
GATAGTGCAAATGTAACCAA+AGG 0.614690 5.3:-10070789 None:intergenic
CATTCGGTTGAAATCAACGG+TGG 0.616978 5.3:-10069841 None:intergenic
TGGAAGCTGGTCATCACCTG+TGG 0.626198 5.3:+10070815 MS.gene047660:CDS
ACAGGCCACAATAGTAGTGG+GGG 0.633577 5.3:+10070502 MS.gene047660:intron
ACATGGGAAGGGAGATAAGG+AGG 0.643159 5.3:-10068889 None:intergenic
TTGATTGATTACCTGAAGAG+TGG 0.645456 5.3:-10068003 None:intergenic
GTTGAAGGGTCTTACACACC+AGG 0.650786 5.3:+10070008 MS.gene047660:CDS
AAGGTTGTGAATTTCAGACA+AGG 0.655478 5.3:+10069130 MS.gene047660:CDS
GGTTGTAGCACTGATGCAGA+AGG 0.659494 5.3:+10070274 MS.gene047660:CDS
GACAGGCCACAATAGTAGTG+GGG 0.662710 5.3:+10070501 MS.gene047660:intron
GTTGAATGCCTTGAAAGAAG+GGG 0.670351 5.3:+10071649 MS.gene047660:CDS
AGCTTAATTCTACTACCACT+AGG 0.672932 5.3:+10069275 MS.gene047660:CDS
AAGAGAAATCTGAGGCCTAG+TGG 0.675130 5.3:-10069290 None:intergenic
AATGCCTTGAAAGAAGGGGA+AGG 0.676784 5.3:+10071653 MS.gene047660:CDS
AAGGCAGCCTCTTTCACACA+TGG 0.686885 5.3:+10071672 MS.gene047660:CDS
ATACCATATGGATCGCGTGG+AGG 0.714464 5.3:-10069756 None:intergenic
CAGGCCACAATAGTAGTGGG+GGG 0.734448 5.3:+10070503 MS.gene047660:intron
CTTCTGGCAAGAGAAATCTG+AGG 0.762148 5.3:-10069298 None:intergenic
AAGACCCTTCAACTTCACAG+AGG 0.815652 5.3:-10069998 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATCAATGTATTTATTA+AGG + chr5.3:10071376-10071395 MS.gene047660:intron 10.0%
!! AATGCTTATCTAAATATAAT+TGG - chr5.3:10070452-10070471 None:intergenic 15.0%
!! AATTGAGAAAAATAAGAAAT+TGG + chr5.3:10068391-10068410 MS.gene047660:intron 15.0%
!! ATAAAGAGAAAGAAAAAAAT+AGG - chr5.3:10068061-10068080 None:intergenic 15.0%
!! ATAATTATCATTCTTAATGT+GGG + chr5.3:10071346-10071365 MS.gene047660:intron 15.0%
!! GAAAAACAAATAAAGAAAAT+TGG - chr5.3:10068086-10068105 None:intergenic 15.0%
!!! ACATTAACTATTTTCTTTTT+CGG + chr5.3:10070879-10070898 MS.gene047660:intron 15.0%
!!! ATATATGAAAATTTGTTTCA+GGG + chr5.3:10070962-10070981 MS.gene047660:intron 15.0%
!!! ATCTATCATAAATTTGTTAT+CGG + chr5.3:10071162-10071181 MS.gene047660:intron 15.0%
!!! ATTTTTATTTTATGAAGGTA+AGG + chr5.3:10071425-10071444 MS.gene047660:intron 15.0%
!!! TATATATGAAAATTTGTTTC+AGG + chr5.3:10070961-10070980 MS.gene047660:intron 15.0%
!!! TATTTTTTTCTTTCTCTTTA+TGG + chr5.3:10068060-10068079 MS.gene047660:intron 15.0%
!!! TTTTTATTTTATGAAGGTAA+GGG + chr5.3:10071426-10071445 MS.gene047660:intron 15.0%
!! AAAATTAGAAAAGTGGAAAT+TGG - chr5.3:10071307-10071326 None:intergenic 20.0%
!! AATCAATGTATTTATTAAGG+CGG + chr5.3:10071379-10071398 MS.gene047660:intron 20.0%
!! ACAAGAAAAACTAAAAAAGT+TGG + chr5.3:10070118-10070137 MS.gene047660:intron 20.0%
!! ATCAAAATTCCTTCAAAAAA+CGG + chr5.3:10068021-10068040 MS.gene047660:intron 20.0%
!! ATCGATTAAAGTAAGTTATA+AGG + chr5.3:10069886-10069905 MS.gene047660:intron 20.0%
!! CAATTATTTGGTTATATTGT+AGG + chr5.3:10070214-10070233 MS.gene047660:intron 20.0%
!! CATAATTATCATTCTTAATG+TGG + chr5.3:10071345-10071364 MS.gene047660:intron 20.0%
!! GAAATCTATTGAAAAGAAAA+TGG + chr5.3:10069396-10069415 MS.gene047660:CDS 20.0%
!! TCGATTAAAGTAAGTTATAA+GGG + chr5.3:10069887-10069906 MS.gene047660:intron 20.0%
!!! ATTTTCATATATACTAGTCA+AGG - chr5.3:10070954-10070973 None:intergenic 20.0%
!!! CACATAATACTTTGAAAAAA+GGG + chr5.3:10068647-10068666 MS.gene047660:CDS 20.0%
!!! TCTATCATAAATTTGTTATC+GGG + chr5.3:10071163-10071182 MS.gene047660:intron 20.0%
!!! TTTCTCATGTTTTTTTTTGT+TGG + chr5.3:10068155-10068174 MS.gene047660:intron 20.0%
!!! TTTTTTTTTTATTGATCAGC+TGG + chr5.3:10069566-10069585 MS.gene047660:intron 20.0%
! AAATGAGAAAGAAAGATAGA+AGG - chr5.3:10068533-10068552 None:intergenic 25.0%
! AAGAAACAAATGACCATTTA+AGG + chr5.3:10068125-10068144 MS.gene047660:intron 25.0%
! AGGTGTAGATTTATATTTGA+TGG + chr5.3:10070148-10070167 MS.gene047660:intron 25.0%
! ATATCCAAAACAAGAGATAT+TGG + chr5.3:10069786-10069805 MS.gene047660:CDS 25.0%
! CGATTAAAGTAAGTTATAAG+GGG + chr5.3:10069888-10069907 MS.gene047660:intron 25.0%
! CTAGTAGAAAGTTAGTAAAT+GGG + chr5.3:10069326-10069345 MS.gene047660:CDS 25.0%
! CTTACATAATTCAAGTGATA+AGG - chr5.3:10070575-10070594 None:intergenic 25.0%
! GCACATCATATAGTAATTAT+TGG - chr5.3:10069516-10069535 None:intergenic 25.0%
! GTAGAACAATTAATAATGCA+AGG - chr5.3:10068722-10068741 None:intergenic 25.0%
! TAGATGAAAATATTGTTCTG+TGG + chr5.3:10070856-10070875 MS.gene047660:intron 25.0%
! TATGAGAATTTCCATATTCA+AGG + chr5.3:10069710-10069729 MS.gene047660:CDS 25.0%
! TCTAGTAGAAAGTTAGTAAA+TGG + chr5.3:10069325-10069344 MS.gene047660:CDS 25.0%
!! GCACATAATACTTTGAAAAA+AGG + chr5.3:10068646-10068665 MS.gene047660:CDS 25.0%
!! TGTTTTTCTGTTTGATTGTA+AGG + chr5.3:10068098-10068117 MS.gene047660:intron 25.0%
!! TTTTCAATAGATTTCTCTTC+TGG - chr5.3:10069391-10069410 None:intergenic 25.0%
!!! TAAGTGTTACTTTAACAGTT+AGG + chr5.3:10068434-10068453 MS.gene047660:intron 25.0%
AAAAACCAGTCAAGTATCTT+TGG - chr5.3:10071550-10071569 None:intergenic 30.0%
AACCTGAAACTGAAATCATA+GGG - chr5.3:10071709-10071728 None:intergenic 30.0%
AAGAACATAGTTCTCAGATT+TGG - chr5.3:10068475-10068494 None:intergenic 30.0%
AATCTCACAAAAGCTATTGT+AGG - chr5.3:10069814-10069833 None:intergenic 30.0%
ACAAAATTCCTCAGATGATA+AGG + chr5.3:10069617-10069636 MS.gene047660:CDS 30.0%
AGCAAAGAGAGATTATTTAC+AGG + chr5.3:10071486-10071505 MS.gene047660:CDS 30.0%
CTGACTTAATCTACTTACAT+GGG - chr5.3:10068908-10068927 None:intergenic 30.0%
GATATTGAACAGATACCATA+TGG - chr5.3:10069771-10069790 None:intergenic 30.0%
GATGATCACATAAGACATTA+AGG - chr5.3:10070910-10070929 None:intergenic 30.0%
GCTAGTGAAAATTAGAAAAG+TGG - chr5.3:10071314-10071333 None:intergenic 30.0%
GCTGAGAATTGAAATAATCT+AGG + chr5.3:10071004-10071023 MS.gene047660:intron 30.0%
GTAATCTACAAAGCATAACA+AGG - chr5.3:10070661-10070680 None:intergenic 30.0%
GTATCTTACATTCATCATAC+AGG - chr5.3:10070067-10070086 None:intergenic 30.0%
TAATTCCAAAGATACTTGAC+TGG + chr5.3:10071542-10071561 MS.gene047660:CDS 30.0%
TCCATATTCAAGGACAATTT+AGG + chr5.3:10069720-10069739 MS.gene047660:CDS 30.0%
TCCTAAATTGTCCTTGAATA+TGG - chr5.3:10069724-10069743 None:intergenic 30.0%
TTAATCTACTTACATGGGAA+GGG - chr5.3:10068903-10068922 None:intergenic 30.0%
TTGAGGTGACTACAATTATT+TGG + chr5.3:10070202-10070221 MS.gene047660:intron 30.0%
TTTCAGACAAGGTTTATATC+AGG + chr5.3:10069141-10069160 MS.gene047660:CDS 30.0%
TTTCATTCGGTTGAAATCAA+CGG - chr5.3:10069847-10069866 None:intergenic 30.0%
! AAATGACCATTTAAGGTTGT+TGG + chr5.3:10068132-10068151 MS.gene047660:intron 30.0%
! ACTGACTTAATCTACTTACA+TGG - chr5.3:10068909-10068928 None:intergenic 30.0%
! ATTGACATGAATGGATTTCT+TGG + chr5.3:10070408-10070427 MS.gene047660:intron 30.0%
! CAAGTTACAAGTCAGTTTTT+AGG - chr5.3:10071098-10071117 None:intergenic 30.0%
! GAAACGCTGAATTTTTCATT+CGG - chr5.3:10069860-10069879 None:intergenic 30.0%
!! AAACTGACTTGTAACTTGTA+AGG + chr5.3:10071100-10071119 MS.gene047660:intron 30.0%
!! ATATCCTCTGAAACTCTATT+TGG - chr5.3:10069666-10069685 None:intergenic 30.0%
!! TGATTTTGACCTTTGATGTT+TGG - chr5.3:10069242-10069261 None:intergenic 30.0%
!!! AACCACTTGGTTTTGAATAT+AGG + chr5.3:10068324-10068343 MS.gene047660:intron 30.0%
!!! AATAGTTTGCCGTTTTTTGA+AGG - chr5.3:10068033-10068052 None:intergenic 30.0%
!!! ATTTTTTGCAGCTTTTAGAC+AGG - chr5.3:10070724-10070743 None:intergenic 30.0%
AAAGGACTTGGAATCTTTGT+TGG + chr5.3:10071582-10071601 MS.gene047660:CDS 35.0%
AAGCAGGAAAAGATGGAAAA+AGG + chr5.3:10068604-10068623 MS.gene047660:intron 35.0%
AAGGTTGTGAATTTCAGACA+AGG + chr5.3:10069130-10069149 MS.gene047660:CDS 35.0%
AAGTTTCCCAAATAAGAACC+TGG - chr5.3:10069977-10069996 None:intergenic 35.0%
AATGATGAGATGAAAGCAAG+AGG + chr5.3:10070741-10070760 MS.gene047660:CDS 35.0%
ACAAAAGCTGAGAACATTAG+AGG - chr5.3:10070310-10070329 None:intergenic 35.0%
ACTACTTAAGTCTAACCACT+TGG + chr5.3:10068311-10068330 MS.gene047660:intron 35.0%
ACTTGGAATCTTTGTTGGAT+TGG + chr5.3:10071587-10071606 MS.gene047660:CDS 35.0%
AGCCTATATTCAAAACCAAG+TGG - chr5.3:10068329-10068348 None:intergenic 35.0%
AGCTTAATTCTACTACCACT+AGG + chr5.3:10069275-10069294 MS.gene047660:CDS 35.0%
AGGAAAAGATGGAAAAAGGA+GGG + chr5.3:10068608-10068627 MS.gene047660:intron 35.0%
AGTTGAATGCCTTGAAAGAA+GGG + chr5.3:10071648-10071667 MS.gene047660:CDS 35.0%
ATATGTACCATGTGTGAAAG+AGG - chr5.3:10071682-10071701 None:intergenic 35.0%
CAAAAGCTGAGAACATTAGA+GGG - chr5.3:10070309-10070328 None:intergenic 35.0%
CAACCTGAAACTGAAATCAT+AGG - chr5.3:10071710-10071729 None:intergenic 35.0%
CCATCACATATTGACATGAA+TGG + chr5.3:10070399-10070418 MS.gene047660:intron 35.0%
CCATTCATGTCAATATGTGA+TGG - chr5.3:10070402-10070421 None:intergenic 35.0%
CCTATGATACCAAACAAAAC+CGG - chr5.3:10071240-10071259 None:intergenic 35.0%
CTAATCTAAAAGACATGTCC+AGG + chr5.3:10069956-10069975 MS.gene047660:intron 35.0%
CTTAATCTACTTACATGGGA+AGG - chr5.3:10068904-10068923 None:intergenic 35.0%
CTTGGAATCTTTGTTGGATT+GGG + chr5.3:10071588-10071607 MS.gene047660:CDS 35.0%
CTTTCTACTAGAAACACTTC+TGG - chr5.3:10069317-10069336 None:intergenic 35.0%
GAAGCAAAGATGAATTGAGA+AGG - chr5.3:10070380-10070399 None:intergenic 35.0%
GAGAAACCAACAACCTTAAA+TGG - chr5.3:10068141-10068160 None:intergenic 35.0%
GAGAAAGAAAGATAGAAGGA+AGG - chr5.3:10068529-10068548 None:intergenic 35.0%
GATAGTGCAAATGTAACCAA+AGG - chr5.3:10070792-10070811 None:intergenic 35.0%
GTTACATTTGCACTATCTTG+TGG + chr5.3:10070795-10070814 MS.gene047660:CDS 35.0%
TATTAAGGCGGTTGAATTGA+TGG + chr5.3:10071391-10071410 MS.gene047660:intron 35.0%
TCAAAGGATCCAAACATCAA+AGG + chr5.3:10069230-10069249 MS.gene047660:CDS 35.0%
TGGAGATGATAAGTAAAGAC+TGG + chr5.3:10068217-10068236 MS.gene047660:intron 35.0%
TGTAGTCACCTCAACATATT+AGG - chr5.3:10070196-10070215 None:intergenic 35.0%
TTAGGTCATATCTCAAGTGA+AGG - chr5.3:10071080-10071099 None:intergenic 35.0%
TTCTAACACCTTATCATCTG+AGG - chr5.3:10069628-10069647 None:intergenic 35.0%
TTGAGAAACAAACATACCAC+AGG - chr5.3:10070834-10070853 None:intergenic 35.0%
TTGATGTTTGGATCCTTTGA+TGG - chr5.3:10069230-10069249 None:intergenic 35.0%
TTGATTGATTACCTGAAGAG+TGG - chr5.3:10068006-10068025 None:intergenic 35.0%
TTTCCTTGCCTAATATGTTG+AGG + chr5.3:10070185-10070204 MS.gene047660:intron 35.0%
! ACATGTCCAGGTTCTTATTT+GGG + chr5.3:10069968-10069987 MS.gene047660:intron 35.0%
! ATGAAAGCAAGAGGCATATT+TGG + chr5.3:10070750-10070769 MS.gene047660:CDS 35.0%
! ATTTTAGATGTTAGAGCTCG+TGG + chr5.3:10069063-10069082 MS.gene047660:intron 35.0%
! CTAAAAAAGTTGGCTCTTTG+AGG + chr5.3:10070128-10070147 MS.gene047660:intron 35.0%
! CTTTTTGCTGATGCTACATA+TGG + chr5.3:10069918-10069937 MS.gene047660:intron 35.0%
! GTTTTTACTCGACTTTGCAA+AGG + chr5.3:10071564-10071583 MS.gene047660:CDS 35.0%
! TGTTTCAGGGTGTTATGTAA+TGG + chr5.3:10070975-10070994 MS.gene047660:intron 35.0%
! TTGTAGGCATATTTAGAGCA+TGG + chr5.3:10070230-10070249 MS.gene047660:intron 35.0%
!! AACTTGGTAATGTTTGTGAC+AGG + chr5.3:10070484-10070503 MS.gene047660:intron 35.0%
!! CATTCGAGTTGACTAAAACT+TGG + chr5.3:10070468-10070487 MS.gene047660:intron 35.0%
!! CTCTTCTGGTATTGATGATA+AGG - chr5.3:10069377-10069396 None:intergenic 35.0%
!! TGCAGGTTGATAAGTTAAAG+AGG + chr5.3:10068788-10068807 MS.gene047660:intron 35.0%
!!! CTTATTTTGATCCTACAAGC+CGG + chr5.3:10071218-10071237 MS.gene047660:intron 35.0%
!!! TTTTTGTTGGTCTTACCCTT+CGG + chr5.3:10068168-10068187 MS.gene047660:intron 35.0%
AGAAAATTCGATTGACCCGA+TGG + chr5.3:10069195-10069214 MS.gene047660:CDS 40.0%
AGTCTAAACTTGCGTACTTG+TGG + chr5.3:10068260-10068279 MS.gene047660:intron 40.0%
ATCAGTGCTACAACCATTTC+AGG - chr5.3:10070269-10070288 None:intergenic 40.0%
ATGGACCAGAATTCCATCAA+AGG + chr5.3:10069214-10069233 MS.gene047660:CDS 40.0%
ATGTGCAAAGCAGGAAAAGA+TGG + chr5.3:10068597-10068616 MS.gene047660:intron 40.0%
ATTATCCAGCAAGGTACAGT+AGG + chr5.3:10071194-10071213 MS.gene047660:intron 40.0%
CACACCAAATAGAGTTTCAG+AGG + chr5.3:10069659-10069678 MS.gene047660:CDS 40.0%
CAGGAAAAGATGGAAAAAGG+AGG + chr5.3:10068607-10068626 MS.gene047660:intron 40.0%
CAGTTGAATGCCTTGAAAGA+AGG + chr5.3:10071647-10071666 MS.gene047660:CDS 40.0%
GACATGTCCAGGTTCTTATT+TGG + chr5.3:10069967-10069986 MS.gene047660:intron 40.0%
GATTATTTACAGGCAGCAGT+TGG + chr5.3:10071496-10071515 MS.gene047660:CDS 40.0%
GGTAGTTCGATTAGAAGAGA+AGG + chr5.3:10069111-10069130 MS.gene047660:CDS 40.0%
GTTGAATGCCTTGAAAGAAG+GGG + chr5.3:10071649-10071668 MS.gene047660:CDS 40.0%
TATGATGTGCGAAACGATTG+AGG + chr5.3:10069526-10069545 MS.gene047660:intron 40.0%
TCACCTCAACATATTAGGCA+AGG - chr5.3:10070191-10070210 None:intergenic 40.0%
TCCAAAATGCAAGTTTCTCC+TGG - chr5.3:10070029-10070048 None:intergenic 40.0%
TCTCAAGTGAAGGTGAGATT+TGG - chr5.3:10071070-10071089 None:intergenic 40.0%
TCTCACTTAATGTGCAAAGC+AGG + chr5.3:10068588-10068607 MS.gene047660:intron 40.0%
TGCCCTATGATTTCAGTTTC+AGG + chr5.3:10071704-10071723 MS.gene047660:CDS 40.0%
TGGATCCTTTGATGGAATTC+TGG - chr5.3:10069222-10069241 None:intergenic 40.0%
TTATCCAGCAAGGTACAGTA+GGG + chr5.3:10071195-10071214 MS.gene047660:intron 40.0%
TTGATGGAATTCTGGTCCAT+CGG - chr5.3:10069214-10069233 None:intergenic 40.0%
! ACCAGGAGAAACTTGCATTT+TGG + chr5.3:10070025-10070044 MS.gene047660:CDS 40.0%
! AGCAAGAGGCATATTTGGTT+TGG + chr5.3:10070755-10070774 MS.gene047660:CDS 40.0%
! ATTTTCTGCATTCCTCTTGG+AGG - chr5.3:10069182-10069201 None:intergenic 40.0%
! CGAATTTTCTGCATTCCTCT+TGG - chr5.3:10069185-10069204 None:intergenic 40.0%
! CTTGTCAGCTGATTCTTGTT+TGG - chr5.3:10069455-10069474 None:intergenic 40.0%
! TCAGCTGATTCTTGTTTGGT+TGG - chr5.3:10069451-10069470 None:intergenic 40.0%
! TTATGCTGCTTGAAGTTTGC+AGG + chr5.3:10068771-10068790 MS.gene047660:intron 40.0%
! TTTGGAATGGTCTGAACCTT+TGG + chr5.3:10070773-10070792 MS.gene047660:CDS 40.0%
!! AAATTTGTTATCGGGCCACT+CGG + chr5.3:10071171-10071190 MS.gene047660:intron 40.0%
!! GAGGCATATTTGGTTTGGAA+TGG + chr5.3:10070760-10070779 MS.gene047660:CDS 40.0%
!! GGCACCAATATCTCTTGTTT+TGG - chr5.3:10069793-10069812 None:intergenic 40.0%
!! TTGGTTGGTGATTTCTTCAC+TGG - chr5.3:10069436-10069455 None:intergenic 40.0%
!!! CCGGTTTTGTTTGGTATCAT+AGG + chr5.3:10071237-10071256 MS.gene047660:intron 40.0%
AAAAGGAGGGAGCAGGAAAA+TGG + chr5.3:10068621-10068640 MS.gene047660:CDS 45.0%
AAGACCCTTCAACTTCACAG+AGG - chr5.3:10070001-10070020 None:intergenic 45.0%
AAGCGCTAAGCATAACTGTG+TGG + chr5.3:10071034-10071053 MS.gene047660:intron 45.0%
AATGCCTTGAAAGAAGGGGA+AGG + chr5.3:10071653-10071672 MS.gene047660:CDS 45.0%
ACAACCATTTCAGGACTCTC+AGG - chr5.3:10070260-10070279 None:intergenic 45.0%
ACTCGACTTTGCAAAGGACT+TGG + chr5.3:10071570-10071589 MS.gene047660:CDS 45.0%
ACTTGCCTCTGTGAAGTTGA+AGG + chr5.3:10069993-10070012 MS.gene047660:CDS 45.0%
ATTACGAGAGTCCGATTCCT+CGG - chr5.3:10068196-10068215 None:intergenic 45.0%
CATACCTGAGAGTCCTGAAA+TGG + chr5.3:10070253-10070272 MS.gene047660:CDS 45.0%
CATTCGGTTGAAATCAACGG+TGG - chr5.3:10069844-10069863 None:intergenic 45.0%
CTGTCTACATTTCCTCCAAG+AGG + chr5.3:10069167-10069186 MS.gene047660:CDS 45.0%
CTTACATGGGAAGGGAGATA+AGG - chr5.3:10068895-10068914 None:intergenic 45.0%
CTTCTGGCAAGAGAAATCTG+AGG - chr5.3:10069301-10069320 None:intergenic 45.0%
CTTGCCTCTGTGAAGTTGAA+GGG + chr5.3:10069994-10070013 MS.gene047660:CDS 45.0%
GCTACCTGTTGAACTGAGAA+AGG + chr5.3:10071621-10071640 MS.gene047660:CDS 45.0%
GCTTCCTTTCTCAGTTCAAC+AGG - chr5.3:10071628-10071647 None:intergenic 45.0%
GGAATCGGACTCTCGTAATT+TGG + chr5.3:10068197-10068216 MS.gene047660:intron 45.0%
TCAGTTCAACAGGTAGCTGA+AGG - chr5.3:10071618-10071637 None:intergenic 45.0%
TGACAGGCCACAATAGTAGT+GGG + chr5.3:10070500-10070519 MS.gene047660:intron 45.0%
TGATGGAATTCTGGTCCATC+GGG - chr5.3:10069213-10069232 None:intergenic 45.0%
TGGTGATTTCTTCACTGGAG+TGG - chr5.3:10069431-10069450 None:intergenic 45.0%
TTGCACTATCTTGTGGAAGC+TGG + chr5.3:10070802-10070821 MS.gene047660:CDS 45.0%
! AAGAGAAATCTGAGGCCTAG+TGG - chr5.3:10069293-10069312 None:intergenic 45.0%
! AGAGCACTCACTAGACCTTT+AGG + chr5.3:10068850-10068869 MS.gene047660:CDS 45.0%
! CTTTTAGACAGGTCTGTTGC+AGG - chr5.3:10070713-10070732 None:intergenic 45.0%
!! ACCAAACAAAACCGGCTTGT+AGG - chr5.3:10071232-10071251 None:intergenic 45.0%
!! TGAAAAAAGGGCGTCGAGAA+AGG + chr5.3:10068659-10068678 MS.gene047660:CDS 45.0%
!!! TCCTACAAGCCGGTTTTGTT+TGG + chr5.3:10071228-10071247 MS.gene047660:intron 45.0%
!!! TATATATTTTTATTTTATGA+AGG + chr5.3:10071420-10071439 MS.gene047660:intron 5.0%
AAGGCAGCCTCTTTCACACA+TGG + chr5.3:10071672-10071691 MS.gene047660:CDS 50.0%
ACAGGCCACAATAGTAGTGG+GGG + chr5.3:10070502-10070521 MS.gene047660:intron 50.0%
ACATGGGAAGGGAGATAAGG+AGG - chr5.3:10068892-10068911 None:intergenic 50.0%
ACCTTGCTGGATAATCCGAG+TGG - chr5.3:10071189-10071208 None:intergenic 50.0%
AGATGGAAAAAGGAGGGAGC+AGG + chr5.3:10068614-10068633 MS.gene047660:CDS 50.0%
ATACCATATGGATCGCGTGG+AGG - chr5.3:10069759-10069778 None:intergenic 50.0%
CAGATACCATATGGATCGCG+TGG - chr5.3:10069762-10069781 None:intergenic 50.0%
GACAGGCCACAATAGTAGTG+GGG + chr5.3:10070501-10070520 MS.gene047660:intron 50.0%
GTGACAGGCCACAATAGTAG+TGG + chr5.3:10070499-10070518 MS.gene047660:intron 50.0%
GTTGAAGGGTCTTACACACC+AGG + chr5.3:10070008-10070027 MS.gene047660:CDS 50.0%
TAAGCCCTACTGTACCTTGC+TGG - chr5.3:10071202-10071221 None:intergenic 50.0%
TCGGTTGAAATCAACGGTGG+AGG - chr5.3:10069841-10069860 None:intergenic 50.0%
TGCAGATCACGTGAAGTTGC+AGG + chr5.3:10069477-10069496 MS.gene047660:CDS 50.0%
TTACGAGAGTCCGATTCCTC+GGG - chr5.3:10068195-10068214 None:intergenic 50.0%
! AGTTGCGGTATTGGAGGAAG+AGG + chr5.3:10069090-10069109 MS.gene047660:CDS 50.0%
!! AGACGAGGAAGTGCTCCTAA+AGG - chr5.3:10068868-10068887 None:intergenic 50.0%
!! AGGGCGTCGAGAAAGGAAAA+TGG + chr5.3:10068666-10068685 MS.gene047660:CDS 50.0%
!! GGTTGTAGCACTGATGCAGA+AGG + chr5.3:10070274-10070293 MS.gene047660:CDS 50.0%
ACACCTCCACGCGATCCATA+TGG + chr5.3:10069753-10069772 MS.gene047660:CDS 55.0%
AGAGCTCGTGGCTGAAGTTG+CGG + chr5.3:10069075-10069094 MS.gene047660:CDS 55.0%
CAGAGCACACACCACTCTTC+AGG + chr5.3:10067992-10068011 MS.gene047660:CDS 55.0%
CGTGGCTGAAGTTGCGGTAT+TGG + chr5.3:10069081-10069100 MS.gene047660:CDS 55.0%
GCCACTCGGATTATCCAGCA+AGG + chr5.3:10071185-10071204 MS.gene047660:intron 55.0%
GCTGCCTTCCCCTTCTTTCA+AGG - chr5.3:10071660-10071679 None:intergenic 55.0%
GGGAGATAAGGAGGAAGACG+AGG - chr5.3:10068883-10068902 None:intergenic 55.0%
GTGTCCCCCCACTACTATTG+TGG - chr5.3:10070510-10070529 None:intergenic 55.0%
TGGAAGCTGGTCATCACCTG+TGG + chr5.3:10070815-10070834 MS.gene047660:CDS 55.0%
! CAGGCCACAATAGTAGTGGG+GGG + chr5.3:10070503-10070522 MS.gene047660:intron 55.0%
! GGCTGAAGTTGCGGTATTGG+AGG + chr5.3:10069084-10069103 MS.gene047660:CDS 55.0%
ACCCTTCGGTCCCGAGGAAT+CGG + chr5.3:10068182-10068201 MS.gene047660:intron 60.0%
AGTGGGGGGACACTTGCTCA+AGG + chr5.3:10070517-10070536 MS.gene047660:CDS 60.0%
TCCGATTCCTCGGGACCGAA+GGG - chr5.3:10068186-10068205 None:intergenic 60.0%
GGTCTTACCCTTCGGTCCCG+AGG + chr5.3:10068176-10068195 MS.gene047660:intron 65.0%
GTCCGATTCCTCGGGACCGA+AGG - chr5.3:10068187-10068206 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 10067984 10071744 10067984 ID=MS.gene047660
chr5.3 mRNA 10067984 10071744 10067984 ID=MS.gene047660.t1;Parent=MS.gene047660
chr5.3 exon 10067984 10068013 10067984 ID=MS.gene047660.t1.exon1;Parent=MS.gene047660.t1
chr5.3 CDS 10067984 10068013 10067984 ID=cds.MS.gene047660.t1;Parent=MS.gene047660.t1
chr5.3 exon 10068610 10068702 10068610 ID=MS.gene047660.t1.exon2;Parent=MS.gene047660.t1
chr5.3 CDS 10068610 10068702 10068610 ID=cds.MS.gene047660.t1;Parent=MS.gene047660.t1
chr5.3 exon 10068793 10068909 10068793 ID=MS.gene047660.t1.exon3;Parent=MS.gene047660.t1
chr5.3 CDS 10068793 10068909 10068793 ID=cds.MS.gene047660.t1;Parent=MS.gene047660.t1
chr5.3 exon 10069070 10069498 10069070 ID=MS.gene047660.t1.exon4;Parent=MS.gene047660.t1
chr5.3 CDS 10069070 10069498 10069070 ID=cds.MS.gene047660.t1;Parent=MS.gene047660.t1
chr5.3 exon 10069585 10069895 10069585 ID=MS.gene047660.t1.exon5;Parent=MS.gene047660.t1
chr5.3 CDS 10069585 10069895 10069585 ID=cds.MS.gene047660.t1;Parent=MS.gene047660.t1
chr5.3 exon 10069978 10070077 10069978 ID=MS.gene047660.t1.exon6;Parent=MS.gene047660.t1
chr5.3 CDS 10069978 10070077 10069978 ID=cds.MS.gene047660.t1;Parent=MS.gene047660.t1
chr5.3 exon 10070236 10070295 10070236 ID=MS.gene047660.t1.exon7;Parent=MS.gene047660.t1
chr5.3 CDS 10070236 10070295 10070236 ID=cds.MS.gene047660.t1;Parent=MS.gene047660.t1
chr5.3 exon 10070506 10070589 10070506 ID=MS.gene047660.t1.exon8;Parent=MS.gene047660.t1
chr5.3 CDS 10070506 10070589 10070506 ID=cds.MS.gene047660.t1;Parent=MS.gene047660.t1
chr5.3 exon 10070720 10070836 10070720 ID=MS.gene047660.t1.exon9;Parent=MS.gene047660.t1
chr5.3 CDS 10070720 10070836 10070720 ID=cds.MS.gene047660.t1;Parent=MS.gene047660.t1
chr5.3 exon 10071442 10071744 10071442 ID=MS.gene047660.t1.exon10;Parent=MS.gene047660.t1
chr5.3 CDS 10071442 10071744 10071442 ID=cds.MS.gene047660.t1;Parent=MS.gene047660.t1
Gene Sequence

>MS.gene047660

ATGAGTAGCAGAGCACACACCACTCTTCAGGTAATCAATCAAAATTCCTTCAAAAAACGGCAAACTATTTTCTTCCTATTTTTTTCTTTCTCTTTATGGCCAATTTTCTTTATTTGTTTTTCTGTTTGATTGTAAGGTCTTAAGAAACAAATGACCATTTAAGGTTGTTGGTTTCTCATGTTTTTTTTTGTTGGTCTTACCCTTCGGTCCCGAGGAATCGGACTCTCGTAATTTGGAGATGATAAGTAAAGACTGGTCAAAGATTATTCATGCTATAGTCTAAACTTGCGTACTTGTGGTCAATTTGACTTTCACTGAAACTCATCGACTACTTAAGTCTAACCACTTGGTTTTGAATATAGGCTTCTCATGAAAATTAAGCTATGTAACATAAAATCTCTTAGAAAAATTGAGAAAAATAAGAAATTGGTTTAAAAGCATAACATAAACTAAGTGTTACTTTAACAGTTAGGAATGATGTTTTAATTCCAAATCTGAGAACTATGTTCTTTCACTTCTCATGAGAAACAAATAGTCTCTGTCCTTCCTTCTATCTTTCTTTCTCATTTCATACAAAAACTGAAGTTTCTACAAAAAAATTGTTTCTCACTTAATGTGCAAAGCAGGAAAAGATGGAAAAAGGAGGGAGCAGGAAAATGGCTGCACATAATACTTTGAAAAAAGGGCGTCGAGAAAGGAAAATGGCTTTGATACAAGATGTGAGTGTAACATATACCTTGCATTATTAATTGTTCTACACATTATTTGTAATTTTTCAGTGTATTTATTATGCTGCTTGAAGTTTGCAGGTTGATAAGTTAAAGAGGAAGCTAAGACATGAAGAGAATGTTCATAGAGTGTTAGAAAGAGCACTCACTAGACCTTTAGGAGCACTTCCTCGTCTTCCTCCTTATCTCCCTTCCCATGTAAGTAGATTAAGTCAGTGATCGATCAATTGTATTCACTATATCTCATTGATCAATTGTATTCAATACATTCAATATATATCTTAATTAGAGTTAAGTTTTTGATCTTTGATATCTATAGACATTGAAAGTAAGAAAAACTGTGTATTGTGTATTTTAGATGTTAGAGCTCGTGGCTGAAGTTGCGGTATTGGAGGAAGAGGTAGTTCGATTAGAAGAGAAGGTTGTGAATTTCAGACAAGGTTTATATCAGGAAGCTGTCTACATTTCCTCCAAGAGGAATGCAGAAAATTCGATTGACCCGATGGACCAGAATTCCATCAAAGGATCCAAACATCAAAGGTCAAAATCACTGTCTCAAAGTGAGCTTAATTCTACTACCACTAGGCCTCAGATTTCTCTTGCCAGAAGTGTTTCTAGTAGAAAGTTAGTAAATGGGAAACAATCGCATTCAAAACAAGATTCCTTATCATCAATACCAGAAGAGAAATCTATTGAAAAGAAAATGGCTAAAGTCACCACTCCAGTGAAGAAATCACCAACCAAACAAGAATCAGCTGACAAGTGTGCAGATCACGTGAAGTTGCAGGTACTTAACAGTTTCCAATAATTACTATATGATGTGCGAAACGATTGAGGTGTCATTTCAACAATCATTTTTTTTTTATTGATCAGCTGGAGAAGAGATTAGTAGATCAAGAAAGAGCACAAAATTCCTCAGATGATAAGGTGTTAGAAGTTGATAATAGCACACCAAATAGAGTTTCAGAGGATATAGTCAAGTGTTTGCGTAGCATATTTATGAGAATTTCCATATTCAAGGACAATTTAGGAGAATCGAAAACACCTCCACGCGATCCATATGGTATCTGTTCAATATCCAAAACAAGAGATATTGGTGCCTACAATAGCTTTTGTGAGATTGAAGCCTCCACCGTTGATTTCAACCGAATGAAAAATTCAGCGTTTCTCATCAATCGATTAAAGTAAGTTATAAGGGGTTATTAACTTTTTGCTGATGCTACATATGGACTATGAGTGTCTGTCTAATCTAAAAGACATGTCCAGGTTCTTATTTGGGAAACTTGCCTCTGTGAAGTTGAAGGGTCTTACACACCAGGAGAAACTTGCATTTTGGATAAACACTTATAATTCCTGTATGATGAATGTAAGATACTTTTTCTGTCACTCATTTACTACTTCTCACTACAAGAAAAACTAAAAAAGTTGGCTCTTTGAGGTGTAGATTTATATTTGATGGCACATACACTCACATTTCCTTGCCTAATATGTTGAGGTGACTACAATTATTTGGTTATATTGTAGGCATATTTAGAGCATGGCATACCTGAGAGTCCTGAAATGGTTGTAGCACTGATGCAGAAGGTACAATAATCCCTCTAATGTTCTCAGCTTTTGTTTTTGTTTTAAGAACAAATTATTCAGAGCACAAAAACTATCGTTGTTCCTTCTCAATTCATCTTTGCTTCCATCACATATTGACATGAATGGATTTCTTGGTACTCTTCTTTCTAACTTCCAATTATATTTAGATAAGCATTCGAGTTGACTAAAACTTGGTAATGTTTGTGACAGGCCACAATAGTAGTGGGGGGACACTTGCTCAAGGCAATGACTATAGAGCACTTCATCTTGAGACTTCCTTATCACTTGAATTATGTAAGTTCATAATCTACTATCTGCTTGTGCTAAACATGATCATTTTTTATTTTTTTATTTTTTGAAGTCCTTGTTATGCTTTGTAGATTACAATTCATCTCTTGATTTTCATCTTTGCTTCCTGCAACAGACCTGTCTAAAAGCTGCAAAAAATGATGAGATGAAAGCAAGAGGCATATTTGGTTTGGAATGGTCTGAACCTTTGGTTACATTTGCACTATCTTGTGGAAGCTGGTCATCACCTGTGGTATGTTTGTTTCTCAATTTAGATGAAAATATTGTTCTGTGGACATTAACTATTTTCTTTTTCGGATATGCCTTAATGTCTTATGTGATCATCTAGTCTCACAATATATGATTTCCTTGACTAGTATATATGAAAATTTGTTTCAGGGTGTTATGTAATGGTTAGATGCTGAGAATTGAAATAATCTAGGATAGATTAAGCGCTAAGCATAACTGTGTGGAGAAAATAATCCAAATCTCACCTTCACTTGAGATATGACCTAAAAACTGACTTGTAACTTGTAAGGTAATGACTGAGTTAGTTTCAAAACTTAAGATGTATTGTAATCTATCATAAATTTGTTATCGGGCCACTCGGATTATCCAGCAAGGTACAGTAGGGCTTATTTTGATCCTACAAGCCGGTTTTGTTTGGTATCATAGGAGACTCATCATTATGATACAAAATTAAACATAGTGAAAAGCTTTCCAATTTCCACTTTTCTAATTTTCACTAGCAAGATCAGTTACATAATTATCATTCTTAATGTGGGTGAAATCATAAATCAATGTATTTATTAAGGCGGTTGAATTGATGGAACGAATATATATTTTTATTTTATGAAGGTAAGGGTGTACACAGCATCACAAGTTGATAATGAGTTAGAAGCAGCAAAGAGAGATTATTTACAGGCAGCAGTTGGCATTACAAAAACAAATAAGTTAATAATTCCAAAGATACTTGACTGGTTTTTACTCGACTTTGCAAAGGACTTGGAATCTTTGTTGGATTGGGTCTGCCTTCAGCTACCTGTTGAACTGAGAAAGGAAGCAGTTGAATGCCTTGAAAGAAGGGGAAGGCAGCCTCTTTCACACATGGTACATATGATGCCCTATGATTTCAGTTTCAGGTTGCTTGTACACCAGTAA
Protein sequence

>MS.gene047660.t1

MSSRAHTTLQEKMEKGGSRKMAAHNTLKKGRRERKMALIQDVDKLKRKLRHEENVHRVLERALTRPLGALPRLPPYLPSHMLELVAEVAVLEEEVVRLEEKVVNFRQGLYQEAVYISSKRNAENSIDPMDQNSIKGSKHQRSKSLSQSELNSTTTRPQISLARSVSSRKLVNGKQSHSKQDSLSSIPEEKSIEKKMAKVTTPVKKSPTKQESADKCADHVKLQLEKRLVDQERAQNSSDDKVLEVDNSTPNRVSEDIVKCLRSIFMRISIFKDNLGESKTPPRDPYGICSISKTRDIGAYNSFCEIEASTVDFNRMKNSAFLINRLKFLFGKLASVKLKGLTHQEKLAFWINTYNSCMMNAYLEHGIPESPEMVVALMQKATIVVGGHLLKAMTIEHFILRLPYHLNYTCLKAAKNDEMKARGIFGLEWSEPLVTFALSCGSWSSPVVRVYTASQVDNELEAAKRDYLQAAVGITKTNKLIIPKILDWFLLDFAKDLESLLDWVCLQLPVELRKEAVECLERRGRQPLSHMVHMMPYDFSFRLLVHQ