Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048277.t1 | XP_003594335.1 | 94.5 | 584 | 21 | 1 | 1 | 584 | 1 | 573 | 0.00E+00 | 1094 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048277.t1 | Q9FIK1 | 55.4 | 569 | 218 | 6 | 1 | 552 | 1 | 550 | 2.1e-175 | 617.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048277.t1 | G7IQ44 | 94.5 | 584 | 21 | 1 | 1 | 584 | 1 | 573 | 0.0e+00 | 1094.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene048277 | MS.gene44279 | PPI |
| MS.gene048277 | MS.gene86230 | PPI |
| MS.gene048277 | MS.gene29159 | PPI |
| MS.gene048277 | MS.gene027737 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048277.t1 | MTR_2g027410 | 94.521 | 584 | 21 | 1 | 1 | 584 | 1 | 573 | 0.0 | 1139 |
| MS.gene048277.t1 | MTR_2g027410 | 93.750 | 512 | 21 | 1 | 73 | 584 | 1 | 501 | 0.0 | 971 |
| MS.gene048277.t1 | MTR_4g134210 | 67.822 | 606 | 165 | 7 | 1 | 582 | 1 | 600 | 0.0 | 833 |
| MS.gene048277.t1 | MTR_5g032780 | 44.610 | 538 | 243 | 8 | 1 | 483 | 1 | 538 | 9.31e-146 | 435 |
| MS.gene048277.t1 | MTR_8g069330 | 45.639 | 493 | 231 | 7 | 1 | 465 | 1 | 484 | 1.23e-134 | 405 |
| MS.gene048277.t1 | MTR_1g014070 | 38.337 | 493 | 267 | 7 | 1 | 463 | 1 | 486 | 6.61e-118 | 363 |
| MS.gene048277.t1 | MTR_5g015790 | 40.081 | 494 | 252 | 9 | 1 | 463 | 1 | 481 | 9.22e-116 | 358 |
| MS.gene048277.t1 | MTR_1g106430 | 36.220 | 508 | 277 | 7 | 1 | 473 | 1 | 496 | 2.13e-111 | 346 |
| MS.gene048277.t1 | MTR_4g093850 | 36.210 | 533 | 276 | 7 | 5 | 476 | 23 | 552 | 5.12e-105 | 331 |
| MS.gene048277.t1 | MTR_2g009340 | 35.000 | 540 | 280 | 7 | 5 | 476 | 23 | 559 | 1.20e-100 | 320 |
| MS.gene048277.t1 | MTR_2g018750 | 34.132 | 501 | 287 | 8 | 1 | 463 | 1 | 496 | 5.32e-88 | 285 |
| MS.gene048277.t1 | MTR_5g016060 | 34.565 | 460 | 277 | 7 | 25 | 465 | 39 | 493 | 9.12e-87 | 282 |
| MS.gene048277.t1 | MTR_4g093850 | 35.220 | 477 | 245 | 7 | 5 | 420 | 23 | 496 | 6.90e-86 | 277 |
| MS.gene048277.t1 | MTR_4g095430 | 34.498 | 458 | 279 | 9 | 25 | 465 | 12 | 465 | 8.10e-81 | 265 |
| MS.gene048277.t1 | MTR_8g090220 | 32.996 | 494 | 268 | 12 | 8 | 460 | 35 | 506 | 2.38e-80 | 262 |
| MS.gene048277.t1 | MTR_8g090220 | 33.266 | 493 | 266 | 12 | 8 | 459 | 35 | 505 | 1.57e-79 | 263 |
| MS.gene048277.t1 | MTR_1g094850 | 32.866 | 499 | 296 | 9 | 1 | 465 | 1 | 494 | 1.29e-77 | 257 |
| MS.gene048277.t1 | MTR_1g064360 | 30.754 | 491 | 298 | 9 | 1 | 463 | 1 | 477 | 3.92e-75 | 249 |
| MS.gene048277.t1 | MTR_2g084595 | 32.632 | 475 | 284 | 9 | 24 | 463 | 21 | 494 | 2.31e-74 | 249 |
| MS.gene048277.t1 | MTR_4g022330 | 31.915 | 470 | 296 | 6 | 25 | 473 | 33 | 499 | 8.09e-74 | 247 |
| MS.gene048277.t1 | MTR_3g062540 | 30.853 | 457 | 281 | 6 | 25 | 465 | 23 | 460 | 7.54e-73 | 244 |
| MS.gene048277.t1 | MTR_8g078900 | 30.382 | 497 | 289 | 8 | 23 | 463 | 17 | 512 | 1.19e-72 | 245 |
| MS.gene048277.t1 | MTR_5g075640 | 30.538 | 465 | 281 | 6 | 25 | 465 | 24 | 470 | 1.38e-69 | 235 |
| MS.gene048277.t1 | MTR_2g048390 | 32.159 | 454 | 268 | 9 | 1 | 415 | 1 | 453 | 1.43e-69 | 232 |
| MS.gene048277.t1 | MTR_7g108290 | 32.510 | 486 | 273 | 11 | 17 | 463 | 27 | 496 | 1.17e-68 | 235 |
| MS.gene048277.t1 | MTR_8g078900 | 30.498 | 482 | 278 | 8 | 38 | 463 | 2 | 482 | 2.63e-68 | 233 |
| MS.gene048277.t1 | MTR_3g062540 | 31.651 | 436 | 263 | 7 | 46 | 465 | 2 | 418 | 4.15e-68 | 230 |
| MS.gene048277.t1 | MTR_7g073980 | 30.977 | 481 | 287 | 11 | 14 | 463 | 21 | 487 | 2.46e-67 | 231 |
| MS.gene048277.t1 | MTR_8g078900 | 32.093 | 430 | 255 | 7 | 70 | 463 | 44 | 472 | 1.21e-66 | 228 |
| MS.gene048277.t1 | MTR_1g088885 | 30.041 | 486 | 281 | 10 | 17 | 463 | 27 | 492 | 9.07e-66 | 226 |
| MS.gene048277.t1 | MTR_5g075640 | 30.405 | 444 | 267 | 6 | 46 | 465 | 2 | 427 | 1.21e-63 | 218 |
| MS.gene048277.t1 | MTR_1g082690 | 29.621 | 449 | 272 | 8 | 29 | 463 | 61 | 479 | 1.03e-61 | 213 |
| MS.gene048277.t1 | MTR_2g084595 | 31.382 | 427 | 257 | 9 | 24 | 415 | 21 | 446 | 3.23e-59 | 204 |
| MS.gene048277.t1 | MTR_5g016060 | 32.021 | 381 | 235 | 7 | 104 | 465 | 4 | 379 | 1.69e-56 | 198 |
| MS.gene048277.t1 | MTR_8g078900 | 28.508 | 449 | 264 | 8 | 23 | 415 | 17 | 464 | 1.21e-53 | 189 |
| MS.gene048277.t1 | MTR_8g078900 | 30.105 | 382 | 230 | 7 | 70 | 415 | 44 | 424 | 5.23e-48 | 173 |
| MS.gene048277.t1 | MTR_2g102730 | 33.893 | 298 | 172 | 5 | 183 | 465 | 6 | 293 | 3.95e-40 | 151 |
| MS.gene048277.t1 | MTR_4g011530 | 34.629 | 283 | 152 | 6 | 201 | 465 | 46 | 313 | 1.35e-39 | 150 |
| MS.gene048277.t1 | MTR_4g074190 | 24.742 | 485 | 293 | 11 | 29 | 465 | 6 | 466 | 9.89e-33 | 132 |
| MS.gene048277.t1 | MTR_4g045767 | 27.446 | 419 | 255 | 12 | 70 | 465 | 50 | 442 | 2.02e-32 | 131 |
| MS.gene048277.t1 | MTR_4g074190 | 24.661 | 442 | 265 | 9 | 68 | 465 | 3 | 420 | 7.25e-30 | 123 |
| MS.gene048277.t1 | MTR_1g035720 | 24.752 | 505 | 299 | 14 | 29 | 480 | 6 | 482 | 2.25e-28 | 119 |
| MS.gene048277.t1 | MTR_4g074190 | 24.541 | 436 | 257 | 12 | 29 | 416 | 6 | 417 | 5.61e-27 | 114 |
| MS.gene048277.t1 | MTR_4g080720 | 70.312 | 64 | 19 | 0 | 1 | 64 | 1 | 64 | 3.96e-24 | 96.3 |
| MS.gene048277.t1 | MTR_1g105870 | 31.053 | 190 | 123 | 3 | 33 | 220 | 38 | 221 | 2.35e-23 | 100 |
| MS.gene048277.t1 | MTR_2g010890 | 23.230 | 452 | 285 | 15 | 100 | 527 | 8 | 421 | 1.06e-15 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048277.t1 | AT5G47800 | 55.360 | 569 | 218 | 6 | 1 | 552 | 1 | 550 | 0.0 | 636 |
| MS.gene048277.t1 | AT5G47800 | 55.360 | 569 | 218 | 6 | 1 | 552 | 1 | 550 | 0.0 | 636 |
| MS.gene048277.t1 | AT5G47800 | 55.360 | 569 | 218 | 6 | 1 | 552 | 1 | 550 | 0.0 | 636 |
| MS.gene048277.t1 | AT5G47800 | 55.360 | 569 | 218 | 6 | 1 | 552 | 114 | 663 | 0.0 | 635 |
| MS.gene048277.t1 | AT1G67900 | 43.785 | 539 | 244 | 8 | 1 | 485 | 1 | 534 | 2.21e-139 | 419 |
| MS.gene048277.t1 | AT1G67900 | 43.785 | 539 | 244 | 8 | 1 | 485 | 1 | 534 | 2.21e-139 | 419 |
| MS.gene048277.t1 | AT1G67900 | 43.785 | 539 | 244 | 8 | 1 | 485 | 1 | 534 | 2.21e-139 | 419 |
| MS.gene048277.t1 | AT1G67900 | 43.785 | 539 | 244 | 8 | 1 | 485 | 1 | 534 | 2.21e-139 | 419 |
| MS.gene048277.t1 | AT1G67900 | 43.785 | 539 | 244 | 8 | 1 | 485 | 1 | 534 | 2.21e-139 | 419 |
| MS.gene048277.t1 | AT1G67900 | 43.785 | 539 | 244 | 8 | 1 | 485 | 1 | 534 | 2.21e-139 | 419 |
| MS.gene048277.t1 | AT4G31820 | 36.464 | 543 | 299 | 11 | 1 | 525 | 1 | 515 | 5.11e-118 | 362 |
| MS.gene048277.t1 | AT3G26490 | 38.961 | 539 | 259 | 12 | 1 | 483 | 1 | 525 | 1.45e-117 | 361 |
| MS.gene048277.t1 | AT3G26490 | 38.961 | 539 | 259 | 12 | 1 | 483 | 1 | 525 | 1.45e-117 | 361 |
| MS.gene048277.t1 | AT3G26490 | 38.961 | 539 | 259 | 12 | 1 | 483 | 1 | 525 | 1.45e-117 | 361 |
| MS.gene048277.t1 | AT2G14820 | 37.103 | 504 | 278 | 7 | 1 | 473 | 1 | 496 | 4.38e-115 | 356 |
| MS.gene048277.t1 | AT2G14820 | 37.103 | 504 | 278 | 7 | 1 | 473 | 1 | 496 | 4.38e-115 | 356 |
| MS.gene048277.t1 | AT4G37590 | 39.059 | 489 | 266 | 8 | 1 | 473 | 1 | 473 | 9.03e-112 | 346 |
| MS.gene048277.t1 | AT2G23050 | 37.632 | 473 | 260 | 8 | 1 | 463 | 1 | 448 | 4.13e-109 | 336 |
| MS.gene048277.t1 | AT5G67440 | 39.256 | 484 | 263 | 10 | 1 | 463 | 1 | 474 | 3.91e-108 | 336 |
| MS.gene048277.t1 | AT5G67440 | 39.256 | 484 | 263 | 10 | 1 | 463 | 1 | 474 | 3.91e-108 | 336 |
| MS.gene048277.t1 | AT4G31820 | 35.918 | 490 | 269 | 10 | 53 | 525 | 1 | 462 | 7.34e-103 | 321 |
| MS.gene048277.t1 | AT3G26490 | 38.819 | 474 | 220 | 12 | 1 | 418 | 1 | 460 | 1.64e-97 | 306 |
| MS.gene048277.t1 | AT5G67440 | 38.803 | 451 | 246 | 9 | 41 | 471 | 5 | 445 | 1.83e-96 | 305 |
| MS.gene048277.t1 | AT5G64330 | 32.487 | 591 | 281 | 8 | 7 | 481 | 33 | 621 | 7.05e-90 | 293 |
| MS.gene048277.t1 | AT1G30440 | 33.988 | 509 | 287 | 11 | 1 | 463 | 1 | 506 | 1.33e-87 | 285 |
| MS.gene048277.t1 | AT5G03250 | 32.869 | 502 | 296 | 8 | 1 | 463 | 1 | 500 | 8.79e-82 | 268 |
| MS.gene048277.t1 | AT5G13600 | 34.280 | 493 | 292 | 9 | 1 | 463 | 1 | 491 | 1.06e-80 | 265 |
| MS.gene048277.t1 | AT5G67385 | 32.751 | 458 | 284 | 8 | 25 | 465 | 24 | 474 | 1.10e-80 | 265 |
| MS.gene048277.t1 | AT2G23050 | 38.375 | 357 | 191 | 6 | 111 | 463 | 1 | 332 | 4.34e-77 | 249 |
| MS.gene048277.t1 | AT5G67385 | 33.257 | 436 | 267 | 8 | 47 | 465 | 1 | 429 | 1.23e-75 | 251 |
| MS.gene048277.t1 | AT5G67385 | 33.257 | 436 | 267 | 8 | 47 | 465 | 1 | 429 | 1.23e-75 | 251 |
| MS.gene048277.t1 | AT5G67385 | 33.257 | 436 | 267 | 8 | 47 | 465 | 1 | 429 | 1.23e-75 | 251 |
| MS.gene048277.t1 | AT5G67385 | 33.257 | 436 | 267 | 8 | 47 | 465 | 1 | 429 | 1.23e-75 | 251 |
| MS.gene048277.t1 | AT2G30520 | 32.898 | 459 | 272 | 7 | 25 | 465 | 29 | 469 | 3.77e-75 | 250 |
| MS.gene048277.t1 | AT5G48800 | 31.183 | 465 | 276 | 6 | 25 | 465 | 40 | 484 | 2.06e-72 | 244 |
| MS.gene048277.t1 | AT5G66560 | 30.909 | 550 | 287 | 12 | 23 | 494 | 16 | 550 | 1.94e-71 | 242 |
| MS.gene048277.t1 | AT5G10250 | 28.621 | 580 | 329 | 11 | 5 | 535 | 29 | 572 | 2.39e-71 | 241 |
| MS.gene048277.t1 | AT5G10250 | 29.485 | 563 | 325 | 12 | 8 | 535 | 32 | 557 | 7.55e-71 | 239 |
| MS.gene048277.t1 | AT2G30520 | 32.877 | 438 | 258 | 7 | 46 | 465 | 2 | 421 | 2.34e-69 | 234 |
| MS.gene048277.t1 | AT2G30520 | 32.877 | 438 | 258 | 7 | 46 | 465 | 2 | 421 | 2.34e-69 | 234 |
| MS.gene048277.t1 | AT5G66560 | 32.972 | 461 | 260 | 10 | 68 | 494 | 66 | 511 | 3.09e-69 | 236 |
| MS.gene048277.t1 | AT5G66560 | 32.972 | 461 | 260 | 10 | 68 | 494 | 76 | 521 | 5.52e-69 | 235 |
| MS.gene048277.t1 | AT2G47860 | 31.381 | 478 | 276 | 10 | 23 | 465 | 34 | 494 | 3.37e-68 | 233 |
| MS.gene048277.t1 | AT1G03010 | 31.478 | 521 | 296 | 15 | 23 | 499 | 6 | 509 | 5.95e-68 | 231 |
| MS.gene048277.t1 | AT1G03010 | 31.332 | 533 | 303 | 16 | 11 | 499 | 22 | 535 | 7.71e-68 | 232 |
| MS.gene048277.t1 | AT3G49970 | 32.388 | 423 | 238 | 10 | 38 | 448 | 6 | 392 | 8.77e-68 | 229 |
| MS.gene048277.t1 | AT3G49970 | 32.388 | 423 | 238 | 10 | 38 | 448 | 6 | 392 | 8.77e-68 | 229 |
| MS.gene048277.t1 | AT1G03010 | 31.346 | 520 | 298 | 14 | 23 | 499 | 33 | 536 | 1.19e-67 | 231 |
| MS.gene048277.t1 | AT3G44820 | 31.481 | 486 | 278 | 10 | 29 | 463 | 26 | 507 | 5.59e-65 | 224 |
| MS.gene048277.t1 | AT2G47860 | 29.940 | 501 | 276 | 11 | 23 | 465 | 34 | 517 | 1.86e-63 | 221 |
| MS.gene048277.t1 | AT3G08660 | 28.681 | 523 | 323 | 13 | 19 | 520 | 27 | 520 | 1.64e-61 | 214 |
| MS.gene048277.t1 | AT3G50840 | 31.915 | 470 | 280 | 9 | 16 | 463 | 6 | 457 | 1.90e-60 | 211 |
| MS.gene048277.t1 | AT3G08570 | 30.063 | 479 | 295 | 12 | 13 | 463 | 22 | 488 | 7.47e-60 | 210 |
| MS.gene048277.t1 | AT5G64330 | 38.433 | 268 | 137 | 3 | 7 | 248 | 33 | 298 | 2.44e-54 | 196 |
| MS.gene048277.t1 | AT5G64330 | 36.759 | 253 | 127 | 2 | 262 | 481 | 369 | 621 | 2.86e-38 | 150 |
| MS.gene048277.t1 | AT5G66560 | 30.043 | 466 | 246 | 10 | 26 | 415 | 19 | 480 | 1.19e-52 | 187 |
| MS.gene048277.t1 | AT3G50840 | 31.663 | 439 | 260 | 9 | 47 | 463 | 1 | 421 | 1.67e-52 | 188 |
| MS.gene048277.t1 | AT3G50840 | 31.663 | 439 | 260 | 9 | 47 | 463 | 1 | 421 | 1.67e-52 | 188 |
| MS.gene048277.t1 | AT3G08660 | 28.425 | 489 | 300 | 13 | 53 | 520 | 1 | 460 | 3.82e-52 | 187 |
| MS.gene048277.t1 | AT2G47860 | 30.607 | 428 | 245 | 10 | 23 | 415 | 34 | 444 | 9.54e-52 | 184 |
| MS.gene048277.t1 | AT5G03250 | 30.000 | 390 | 234 | 7 | 111 | 463 | 1 | 388 | 1.01e-47 | 174 |
| MS.gene048277.t1 | AT2G47860 | 29.047 | 451 | 245 | 11 | 23 | 415 | 34 | 467 | 4.19e-47 | 172 |
| MS.gene048277.t1 | AT5G64330 | 38.983 | 236 | 116 | 3 | 39 | 248 | 6 | 239 | 6.19e-46 | 171 |
| MS.gene048277.t1 | AT5G64330 | 36.759 | 253 | 127 | 2 | 262 | 481 | 310 | 562 | 1.29e-38 | 150 |
| MS.gene048277.t1 | AT3G08660 | 28.333 | 420 | 254 | 11 | 19 | 418 | 27 | 419 | 8.18e-46 | 167 |
| MS.gene048277.t1 | AT1G52770 | 34.177 | 316 | 176 | 7 | 201 | 495 | 28 | 332 | 1.68e-43 | 161 |
| MS.gene048277.t1 | AT2G47860 | 28.718 | 390 | 229 | 9 | 111 | 465 | 1 | 376 | 5.95e-42 | 159 |
| MS.gene048277.t1 | AT2G47860 | 28.718 | 390 | 229 | 9 | 111 | 465 | 1 | 376 | 5.95e-42 | 159 |
| MS.gene048277.t1 | AT5G48130 | 26.882 | 465 | 281 | 14 | 24 | 463 | 37 | 467 | 3.03e-40 | 155 |
| MS.gene048277.t1 | AT3G03510 | 30.808 | 396 | 218 | 11 | 80 | 463 | 8 | 359 | 4.34e-39 | 149 |
| MS.gene048277.t1 | AT5G17580 | 26.526 | 475 | 305 | 9 | 10 | 463 | 4 | 455 | 1.05e-36 | 144 |
| MS.gene048277.t1 | AT5G17580 | 27.465 | 426 | 266 | 8 | 59 | 463 | 37 | 440 | 2.91e-36 | 143 |
| MS.gene048277.t1 | AT3G15570 | 30.619 | 307 | 176 | 7 | 189 | 468 | 15 | 311 | 2.37e-34 | 135 |
| MS.gene048277.t1 | AT3G19850 | 25.000 | 484 | 300 | 11 | 21 | 463 | 2 | 463 | 3.25e-34 | 137 |
| MS.gene048277.t1 | AT3G22104 | 26.549 | 452 | 260 | 17 | 29 | 448 | 7 | 418 | 1.73e-26 | 113 |
| MS.gene048277.t1 | AT1G50280 | 22.695 | 423 | 287 | 7 | 66 | 459 | 16 | 427 | 1.12e-25 | 111 |
| MS.gene048277.t1 | AT1G50280 | 22.695 | 423 | 287 | 7 | 66 | 459 | 49 | 460 | 1.56e-25 | 110 |
| MS.gene048277.t1 | AT3G22104 | 26.053 | 380 | 212 | 14 | 98 | 448 | 4 | 343 | 2.98e-16 | 81.6 |
| MS.gene048277.t1 | AT3G22104 | 26.053 | 380 | 212 | 14 | 98 | 448 | 4 | 343 | 2.98e-16 | 81.6 |
| MS.gene048277.t1 | AT3G22104 | 26.053 | 380 | 212 | 14 | 98 | 448 | 4 | 343 | 2.98e-16 | 81.6 |
Find 106 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAGCATTTCAAGTCATTT+AGG | 0.230690 | 2.3:-61965035 | MS.gene048277:CDS |
| GTTCTTCCACCACAGCTAAT+TGG | 0.289528 | 2.3:-61965239 | MS.gene048277:CDS |
| GCACTTCAGGGGACAATCTT+TGG | 0.295952 | 2.3:+61964227 | None:intergenic |
| AAACAACATAAGCTACTTCT+AGG | 0.305988 | 2.3:-61964097 | MS.gene048277:CDS |
| GGCAATAAACATTTATCTTA+AGG | 0.309851 | 2.3:-61964691 | MS.gene048277:intron |
| ACAGCGTGCGCACGCACTTC+AGG | 0.311538 | 2.3:+61964214 | None:intergenic |
| CATTTGCGATGCTGAACTTC+CGG | 0.323956 | 2.3:+61965157 | None:intergenic |
| AGAAGTTATAAATCAGAATA+TGG | 0.331860 | 2.3:-61963812 | MS.gene048277:CDS |
| TCCAAGTTCACCATGCTTCC+TGG | 0.340331 | 2.3:+61963863 | None:intergenic |
| GTCAAGGAAGAAAGTATTCC+AGG | 0.354497 | 2.3:-61963881 | MS.gene048277:CDS |
| CCTTGCCACAACTTGAAGAT+AGG | 0.357168 | 2.3:+61964800 | None:intergenic |
| GCCTTCCTTTACCTGTGATA+AGG | 0.357490 | 2.3:+61965708 | None:intergenic |
| ACCCTGGTTCTGTGGACAAC+AGG | 0.367234 | 2.3:-61964869 | MS.gene048277:CDS |
| AGAGTTAGTTCAAGTTGTAT+TGG | 0.373725 | 2.3:-61964922 | MS.gene048277:CDS |
| ACTCTACATCATAAGAATTC+AGG | 0.379747 | 2.3:+61964940 | None:intergenic |
| ATCATAAAGGTTAAAAGTTC+CGG | 0.381413 | 2.3:-61965176 | MS.gene048277:CDS |
| TTTAGTTCATGCATTCTTGA+AGG | 0.388872 | 2.3:-61965844 | MS.gene048277:CDS |
| CCTTCCTTTACCTGTGATAA+GGG | 0.392042 | 2.3:+61965709 | None:intergenic |
| CTTTCTCTTGGTCATAGTAT+AGG | 0.394661 | 2.3:+61964152 | None:intergenic |
| GTGATTATGTGCAGGTTAAA+TGG | 0.396517 | 2.3:-61965397 | MS.gene048277:intron |
| AGCTGCACAACAGTTCTTAA+TGG | 0.398507 | 2.3:+61964175 | None:intergenic |
| TCCTCAGTCCACCAATCCTT+TGG | 0.399964 | 2.3:+61965323 | None:intergenic |
| GTTGAGAGGGGAAACTTTGT+AGG | 0.400848 | 2.3:-61965883 | MS.gene048277:CDS |
| TCCAGGAAGCATGGTGAACT+TGG | 0.413318 | 2.3:-61963864 | MS.gene048277:CDS |
| CAACGGACTCATTCATTTGA+AGG | 0.422727 | 2.3:+61965902 | None:intergenic |
| TTTCCTTTGAGTCTTTCTCT+TGG | 0.425900 | 2.3:+61964140 | None:intergenic |
| AGGGTCAACACAAAACTAAA+AGG | 0.432339 | 2.3:-61963955 | MS.gene048277:CDS |
| CAGAACAAAGTCTTTGTAGA+AGG | 0.439216 | 2.3:+61966073 | None:intergenic |
| GATCATAAGCAAATGCTCAT+AGG | 0.443050 | 2.3:-61963842 | MS.gene048277:CDS |
| GCTGAAAGTGTACCAGCTAT+TGG | 0.449675 | 2.3:-61964741 | MS.gene048277:CDS |
| GTTCATGCATTCTTGAAGGT+TGG | 0.453604 | 2.3:-61965840 | MS.gene048277:CDS |
| TAAGATAAATGTTTATTGCC+TGG | 0.454792 | 2.3:+61964694 | None:intergenic |
| TTAAGATCAATCAGAAAAGT+TGG | 0.457461 | 2.3:-61964837 | MS.gene048277:CDS |
| GAAAAGATCTATATTTAGAA+TGG | 0.463506 | 2.3:+61965295 | None:intergenic |
| ATCATTCTGTTCCAAAGGAT+TGG | 0.466212 | 2.3:-61965334 | MS.gene048277:CDS |
| CGGAAGTTCAGCATCGCAAA+TGG | 0.468266 | 2.3:-61965156 | MS.gene048277:CDS |
| CAGCGTGCGCACGCACTTCA+GGG | 0.472237 | 2.3:+61964215 | None:intergenic |
| GTTAGATGATAAATTAGCCT+TGG | 0.472933 | 2.3:-61963933 | MS.gene048277:CDS |
| AATGCATAAACAGGTGCATT+CGG | 0.477091 | 2.3:-61964296 | MS.gene048277:intron |
| CCATGGCTATCTCTTGTGGC+AGG | 0.481421 | 2.3:+61964061 | None:intergenic |
| TCTTGCTGAGAGTAGAGAAA+AGG | 0.481826 | 2.3:-61963975 | MS.gene048277:CDS |
| TTCCTGTTGTCCACAGAACC+AGG | 0.482017 | 2.3:+61964867 | None:intergenic |
| TCTTGAATTCTTCCTTGTCA+AGG | 0.482245 | 2.3:+61964023 | None:intergenic |
| CATCGCAAATGGAAGAATCC+AGG | 0.483080 | 2.3:-61965145 | MS.gene048277:CDS |
| GCTATGAAGTTCATGAAACT+TGG | 0.484891 | 2.3:-61966489 | MS.gene048277:CDS |
| TGCTCTAATCTGCCAATAGC+TGG | 0.487466 | 2.3:+61964729 | None:intergenic |
| CCAGAGTGGTCTGAGAATCT+TGG | 0.492441 | 2.3:-61965778 | MS.gene048277:CDS |
| GATGGTTATAAGAGGAGTCA+AGG | 0.495344 | 2.3:-61963897 | MS.gene048277:CDS |
| AGCCATGGTAAAGGATCTCT+TGG | 0.500525 | 2.3:-61964046 | MS.gene048277:CDS |
| GTGGTTACCTTGCATCATAA+AGG | 0.502589 | 2.3:-61965189 | MS.gene048277:CDS |
| TATAAGATAAGTTGTATCGT+TGG | 0.507629 | 2.3:+61966215 | None:intergenic |
| TCTCCACTTGTTTCAAAATG+TGG | 0.518950 | 2.3:-61966096 | MS.gene048277:CDS |
| ATTCTGTTCCAAAGGATTGG+TGG | 0.520945 | 2.3:-61965331 | MS.gene048277:CDS |
| TTTACCATGGCTATCTCTTG+TGG | 0.524518 | 2.3:+61964057 | None:intergenic |
| GTTGTAACCGGGCCTAGTGT+AGG | 0.526256 | 2.3:+61965367 | None:intergenic |
| CTTGCTGAGAGTAGAGAAAA+GGG | 0.528622 | 2.3:-61963974 | MS.gene048277:CDS |
| TGATTCCTATCTTCAAGTTG+TGG | 0.532607 | 2.3:-61964805 | MS.gene048277:CDS |
| GCGGAAAAGAAGCGCTTGTG+TGG | 0.534519 | 2.3:-61964262 | MS.gene048277:CDS |
| AGCATGATTCCTGCAGATAG+AGG | 0.543978 | 2.3:-61965089 | MS.gene048277:CDS |
| TGCATGTATATGCATGTAAG+TGG | 0.544550 | 2.3:-61965208 | MS.gene048277:CDS |
| GATAGAGGTTCAGTTTCAGT+TGG | 0.544692 | 2.3:-61965074 | MS.gene048277:CDS |
| GAAACTGAACCTCTATCTGC+AGG | 0.546404 | 2.3:+61965080 | None:intergenic |
| AATGAATGAGTCCGTTGAGA+GGG | 0.548065 | 2.3:-61965896 | MS.gene048277:CDS |
| GCTTCACCAATTAGCTGTGG+TGG | 0.553316 | 2.3:+61965233 | None:intergenic |
| TCCTACACCTACACTAGGCC+CGG | 0.558420 | 2.3:-61965374 | MS.gene048277:CDS |
| ACAAGAGATAGCCATGGTAA+AGG | 0.563901 | 2.3:-61964055 | MS.gene048277:CDS |
| AGTTCTTACACCCTTATCAC+AGG | 0.568010 | 2.3:-61965719 | MS.gene048277:intron |
| AGTGGCGTGCAACGTTGCAA+TGG | 0.572556 | 2.3:+61965810 | None:intergenic |
| CTAGAGCTTAATGATATGCC+TGG | 0.572616 | 2.3:-61966024 | MS.gene048277:CDS |
| CCTATCTTCAAGTTGTGGCA+AGG | 0.573519 | 2.3:-61964800 | MS.gene048277:CDS |
| AGAGCATCATTCTGTTCCAA+AGG | 0.584180 | 2.3:-61965339 | MS.gene048277:CDS |
| CCAAGATTCTCAGACCACTC+TGG | 0.584674 | 2.3:+61965778 | None:intergenic |
| GGCATATCATTAAGCTCTAG+AGG | 0.584689 | 2.3:+61966027 | None:intergenic |
| AAGAATCTACCCTGGTTCTG+TGG | 0.585804 | 2.3:-61964877 | MS.gene048277:CDS |
| TTCTCTACTCTCAGCAAGAG+AGG | 0.587532 | 2.3:+61963979 | None:intergenic |
| AGAGCATGATGATTTGTACC+AGG | 0.593159 | 2.3:-61964712 | MS.gene048277:CDS |
| AGAAAGTATTCCAGGAAGCA+TGG | 0.597512 | 2.3:-61963873 | MS.gene048277:CDS |
| AGAGCTACAAACTTTGACAC+TGG | 0.597683 | 2.3:+61964765 | None:intergenic |
| ATCGCAAATGGAAGAATCCA+GGG | 0.604485 | 2.3:-61965144 | MS.gene048277:CDS |
| ATAAGCAAATGCTCATAGGA+AGG | 0.605385 | 2.3:-61963838 | MS.gene048277:CDS |
| TCTACACGGAACAAGCTACC+AGG | 0.606588 | 2.3:-61966449 | MS.gene048277:intron |
| AGCTTAGCAGCACAAAGTGA+AGG | 0.608513 | 2.3:+61965925 | None:intergenic |
| TACAAAGTTTCCCCTCTCAA+CGG | 0.611119 | 2.3:+61965885 | None:intergenic |
| TGACCAAGAGAAAGACTCAA+AGG | 0.612388 | 2.3:-61964143 | MS.gene048277:CDS |
| AGCGTGCGCACGCACTTCAG+GGG | 0.616562 | 2.3:+61964216 | None:intergenic |
| CGGAAAAGAAGCGCTTGTGT+GGG | 0.622895 | 2.3:-61964261 | MS.gene048277:CDS |
| TCAAAAGCTTCTGATCCACC+AGG | 0.628037 | 2.3:+61966006 | None:intergenic |
| AAATGAATGAGTCCGTTGAG+AGG | 0.628513 | 2.3:-61965897 | MS.gene048277:CDS |
| AGGATCTCTTGGCCTTGACA+AGG | 0.630881 | 2.3:-61964035 | MS.gene048277:CDS |
| GGTGCATTCGGACTTGAGCA+AGG | 0.634297 | 2.3:-61964284 | MS.gene048277:CDS |
| TCCTGTTGTCCACAGAACCA+GGG | 0.640405 | 2.3:+61964868 | None:intergenic |
| AGTTCATGAAACTTGGAACA+AGG | 0.644491 | 2.3:-61966482 | MS.gene048277:CDS |
| ATGAATGAGTCCGTTGAGAG+GGG | 0.649978 | 2.3:-61965895 | MS.gene048277:CDS |
| GAGCTTAATGATATGCCTGG+TGG | 0.663018 | 2.3:-61966021 | MS.gene048277:CDS |
| AATGGTCCTACACCTACACT+AGG | 0.678371 | 2.3:-61965379 | MS.gene048277:CDS |
| TACAACTTATCTTATACACA+AGG | 0.683273 | 2.3:-61966208 | MS.gene048277:intron |
| GGCCAAGAGATCCTTTACCA+TGG | 0.685445 | 2.3:+61964044 | None:intergenic |
| AAGGTCAGATACTTTCTACA+CGG | 0.691782 | 2.3:-61966463 | MS.gene048277:CDS |
| AAAGCTTCACCAATTAGCTG+TGG | 0.694004 | 2.3:+61965230 | None:intergenic |
| ACCGGGCCTAGTGTAGGTGT+AGG | 0.701731 | 2.3:+61965373 | None:intergenic |
| CCTGCCACAAGAGATAGCCA+TGG | 0.709754 | 2.3:-61964061 | MS.gene048277:CDS |
| TCCAAAGGATTGGTGGACTG+AGG | 0.711549 | 2.3:-61965324 | MS.gene048277:CDS |
| AAGTAGCATACAGTTTCACG+AGG | 0.711955 | 2.3:-61964976 | MS.gene048277:CDS |
| CCACTCTGGTAACTTCTCAG+TGG | 0.722395 | 2.3:+61965792 | None:intergenic |
| GCATTCGGACTTGAGCAAGG+CGG | 0.760136 | 2.3:-61964281 | MS.gene048277:CDS |
| CCACTGAGAAGTTACCAGAG+TGG | 0.775962 | 2.3:-61965792 | MS.gene048277:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATAAAAGTATATTAATG+AGG | - | chr2.3:61964732-61964751 | MS.gene048277:CDS | 10.0% |
| !!! | AAATAAAAGTATATTAATGA+GGG | - | chr2.3:61964733-61964752 | MS.gene048277:CDS | 10.0% |
| !!! | ATTTTCAATGTTTTAAAAAA+CGG | - | chr2.3:61965792-61965811 | MS.gene048277:CDS | 10.0% |
| !! | AGAAGTTATAAATCAGAATA+TGG | - | chr2.3:61966467-61966486 | MS.gene048277:CDS | 20.0% |
| !! | ATAAATCTTGGTTATATCTA+TGG | - | chr2.3:61965935-61965954 | MS.gene048277:CDS | 20.0% |
| !! | CATTAATAAATAGTAGTTAG+CGG | - | chr2.3:61964686-61964705 | MS.gene048277:intron | 20.0% |
| !! | CATTCATGATTATGATAATA+AGG | + | chr2.3:61964000-61964019 | None:intergenic | 20.0% |
| !! | GAAAAGATCTATATTTAGAA+TGG | + | chr2.3:61964987-61965006 | None:intergenic | 20.0% |
| !! | TATAACCAAGATTTATAATG+TGG | + | chr2.3:61965931-61965950 | None:intergenic | 20.0% |
| !! | TTTGATATTGCAGAAATTTA+CGG | + | chr2.3:61965889-61965908 | None:intergenic | 20.0% |
| !!! | GAACATTTTTTGTTTAACAA+TGG | - | chr2.3:61964860-61964879 | MS.gene048277:CDS | 20.0% |
| !!! | TAAACTGTCTTAAATTTTCA+TGG | - | chr2.3:61965660-61965679 | MS.gene048277:intron | 20.0% |
| !!! | TTGATTGATAATCTAAAATG+AGG | - | chr2.3:61964776-61964795 | MS.gene048277:CDS | 20.0% |
| ! | ACAAAATCAAATCTTATGAG+GGG | + | chr2.3:61964607-61964626 | None:intergenic | 25.0% |
| ! | ACAAGTAAATACTCCAAATA+TGG | - | chr2.3:61964808-61964827 | MS.gene048277:CDS | 25.0% |
| ! | AGACAAAATCAAATCTTATG+AGG | + | chr2.3:61964609-61964628 | None:intergenic | 25.0% |
| ! | ATCATAAAGGTTAAAAGTTC+CGG | - | chr2.3:61965103-61965122 | MS.gene048277:CDS | 25.0% |
| ! | ATTATCATAATCATGAATGC+AGG | - | chr2.3:61964001-61964020 | MS.gene048277:CDS | 25.0% |
| ! | GACAAAATCAAATCTTATGA+GGG | + | chr2.3:61964608-61964627 | None:intergenic | 25.0% |
| ! | GGCAATAAACATTTATCTTA+AGG | - | chr2.3:61965588-61965607 | MS.gene048277:intron | 25.0% |
| ! | TAAGATAAATGTTTATTGCC+TGG | + | chr2.3:61965588-61965607 | None:intergenic | 25.0% |
| ! | TACAACTTATCTTATACACA+AGG | - | chr2.3:61964071-61964090 | MS.gene048277:CDS | 25.0% |
| ! | TATAAGATAAGTTGTATCGT+TGG | + | chr2.3:61964067-61964086 | None:intergenic | 25.0% |
| ! | TCTCAAATCAAATAATGATG+TGG | + | chr2.3:61963931-61963950 | None:intergenic | 25.0% |
| ! | TGTGAATGAAATAACATGAT+TGG | + | chr2.3:61965633-61965652 | None:intergenic | 25.0% |
| ! | TTAAGATCAATCAGAAAAGT+TGG | - | chr2.3:61965442-61965461 | MS.gene048277:intron | 25.0% |
| ! | TTATCTTATACACAAGGTAT+CGG | - | chr2.3:61964077-61964096 | MS.gene048277:CDS | 25.0% |
| ! | TTCATCTGTGGTTTATAATT+AGG | - | chr2.3:61963861-61963880 | MS.gene048277:CDS | 25.0% |
| !! | AGATTTTGTTGACAAGATAT+AGG | - | chr2.3:61963948-61963967 | MS.gene048277:CDS | 25.0% |
| !!! | AATTTTTCTGTTTTTTTCCC+TGG | + | chr2.3:61965155-61965174 | None:intergenic | 25.0% |
| !!! | TGGAAAGTTTTTTGAAGTTT+TGG | - | chr2.3:61965377-61965396 | MS.gene048277:CDS | 25.0% |
| AAACAACATAAGCTACTTCT+AGG | - | chr2.3:61966182-61966201 | MS.gene048277:intron | 30.0% | |
| ACTCTACATCATAAGAATTC+AGG | + | chr2.3:61965342-61965361 | None:intergenic | 30.0% | |
| GAGAAAAAGATGGTTATAAG+AGG | - | chr2.3:61966374-61966393 | MS.gene048277:intron | 30.0% | |
| TATCGGAATTAAATTGAGTG+TGG | - | chr2.3:61964094-61964113 | MS.gene048277:CDS | 30.0% | |
| TGTGACCACATTATAAATCT+TGG | - | chr2.3:61965923-61965942 | MS.gene048277:CDS | 30.0% | |
| TGTTGACAAGATATAGGTAT+AGG | - | chr2.3:61963954-61963973 | MS.gene048277:CDS | 30.0% | |
| ! | CTTTTAACCTTTATGATGCA+AGG | + | chr2.3:61965100-61965119 | None:intergenic | 30.0% |
| ! | GTCAAGTCAGCTTTTAATAT+AGG | - | chr2.3:61965766-61965785 | MS.gene048277:CDS | 30.0% |
| ! | GTTAGATGATAAATTAGCCT+TGG | - | chr2.3:61966346-61966365 | MS.gene048277:intron | 30.0% |
| ! | TTGAGCATTTCAAGTCATTT+AGG | - | chr2.3:61965244-61965263 | MS.gene048277:CDS | 30.0% |
| ! | TTTAGTTCATGCATTCTTGA+AGG | - | chr2.3:61964435-61964454 | MS.gene048277:intron | 30.0% |
| ! | TTTTTGCAACTTTGTACTAG+AGG | + | chr2.3:61966165-61966184 | None:intergenic | 30.0% |
| !! | AGAGTTAGTTCAAGTTGTAT+TGG | - | chr2.3:61965357-61965376 | MS.gene048277:CDS | 30.0% |
| !! | TTGGTTTTTATCACAAGATC+AGG | + | chr2.3:61964048-61964067 | None:intergenic | 30.0% |
| AAGGTCAGATACTTTCTACA+CGG | - | chr2.3:61963816-61963835 | MS.gene048277:CDS | 35.0% | |
| AATGCATAAACAGGTGCATT+CGG | - | chr2.3:61965983-61966002 | MS.gene048277:CDS | 35.0% | |
| AGGGTCAACACAAAACTAAA+AGG | - | chr2.3:61966324-61966343 | MS.gene048277:intron | 35.0% | |
| AGTTCATGAAACTTGGAACA+AGG | - | chr2.3:61963797-61963816 | MS.gene048277:CDS | 35.0% | |
| ATAAGCAAATGCTCATAGGA+AGG | - | chr2.3:61966441-61966460 | MS.gene048277:intron | 35.0% | |
| ATCATTCTGTTCCAAAGGAT+TGG | - | chr2.3:61964945-61964964 | MS.gene048277:CDS | 35.0% | |
| ATTAGACCCTTTACGACAAT+TGG | - | chr2.3:61965690-61965709 | MS.gene048277:intron | 35.0% | |
| CACAGATGAAAATGAATACC+TGG | + | chr2.3:61963851-61963870 | None:intergenic | 35.0% | |
| CAGAAATTTACGGTCAAATG+AGG | + | chr2.3:61965879-61965898 | None:intergenic | 35.0% | |
| CAGAACAAAGTCTTTGTAGA+AGG | + | chr2.3:61964209-61964228 | None:intergenic | 35.0% | |
| CTCTAACTAAGTGTCTTTCA+AGG | - | chr2.3:61964634-61964653 | MS.gene048277:intron | 35.0% | |
| CTTTCTCTTGGTCATAGTAT+AGG | + | chr2.3:61966130-61966149 | None:intergenic | 35.0% | |
| GAAAGACACTTAGTTAGAGA+CGG | + | chr2.3:61964633-61964652 | None:intergenic | 35.0% | |
| GATCATAAGCAAATGCTCAT+AGG | - | chr2.3:61966437-61966456 | MS.gene048277:intron | 35.0% | |
| GTGATTATGTGCAGGTTAAA+TGG | - | chr2.3:61964882-61964901 | MS.gene048277:CDS | 35.0% | |
| TAACAATGGTGATTATGTGC+AGG | - | chr2.3:61964874-61964893 | MS.gene048277:CDS | 35.0% | |
| TCTCCACTTGTTTCAAAATG+TGG | - | chr2.3:61964183-61964202 | MS.gene048277:CDS | 35.0% | |
| TCTTGAATTCTTCCTTGTCA+AGG | + | chr2.3:61966259-61966278 | None:intergenic | 35.0% | |
| TGCATGTATATGCATGTAAG+TGG | - | chr2.3:61965071-61965090 | MS.gene048277:CDS | 35.0% | |
| TGTGTGTTCAATGCATAAAC+AGG | - | chr2.3:61965974-61965993 | MS.gene048277:CDS | 35.0% | |
| TTAGACCCTTTACGACAATT+GGG | - | chr2.3:61965691-61965710 | MS.gene048277:intron | 35.0% | |
| TTTCCTTTGAGTCTTTCTCT+TGG | + | chr2.3:61966142-61966161 | None:intergenic | 35.0% | |
| ! | ATGCTCTTTTCTGTTGTAAC+CGG | + | chr2.3:61964927-61964946 | None:intergenic | 35.0% |
| ! | CAGGTATTCATTTTCATCTG+TGG | - | chr2.3:61963849-61963868 | MS.gene048277:CDS | 35.0% |
| ! | CATCTTTTTCTCAAAGTCCA+AGG | + | chr2.3:61966366-61966385 | None:intergenic | 35.0% |
| ! | CTCTTATGAAGTGCCATATT+TGG | + | chr2.3:61964824-61964843 | None:intergenic | 35.0% |
| ! | CTTGGACTTTGAGAAAAAGA+TGG | - | chr2.3:61966364-61966383 | MS.gene048277:intron | 35.0% |
| ! | CTTTGTGCAAAGTTTTGCTA+TGG | - | chr2.3:61964297-61964316 | MS.gene048277:intron | 35.0% |
| ! | GTTTTTATCACAAGATCAGG+AGG | + | chr2.3:61964045-61964064 | None:intergenic | 35.0% |
| ! | TCTTATGAGGGGAAGTTTTA+TGG | + | chr2.3:61964596-61964615 | None:intergenic | 35.0% |
| !! | TGATTCCTATCTTCAAGTTG+TGG | - | chr2.3:61965474-61965493 | MS.gene048277:intron | 35.0% |
| !! | TTTTGGAAAAGAATCTACCC+TGG | - | chr2.3:61965394-61965413 | MS.gene048277:intron | 35.0% |
| AAAGCTTCACCAATTAGCTG+TGG | + | chr2.3:61965052-61965071 | None:intergenic | 40.0% | |
| AAATGAATGAGTCCGTTGAG+AGG | - | chr2.3:61964382-61964401 | MS.gene048277:intron | 40.0% | |
| AAGTAGCATACAGTTTCACG+AGG | - | chr2.3:61965303-61965322 | MS.gene048277:CDS | 40.0% | |
| AATGAATGAGTCCGTTGAGA+GGG | - | chr2.3:61964383-61964402 | MS.gene048277:intron | 40.0% | |
| ACAAGAGATAGCCATGGTAA+AGG | - | chr2.3:61966224-61966243 | MS.gene048277:CDS | 40.0% | |
| ACTTAGCCCAATTGTCGTAA+AGG | + | chr2.3:61965700-61965719 | None:intergenic | 40.0% | |
| AGAGCTACAAACTTTGACAC+TGG | + | chr2.3:61965517-61965536 | None:intergenic | 40.0% | |
| AGCTGCACAACAGTTCTTAA+TGG | + | chr2.3:61966107-61966126 | None:intergenic | 40.0% | |
| AGTTCTTACACCCTTATCAC+AGG | - | chr2.3:61964560-61964579 | MS.gene048277:intron | 40.0% | |
| ATCGCAAATGGAAGAATCCA+GGG | - | chr2.3:61965135-61965154 | MS.gene048277:CDS | 40.0% | |
| ATTCTGTTCCAAAGGATTGG+TGG | - | chr2.3:61964948-61964967 | MS.gene048277:CDS | 40.0% | |
| CCTTCCTTTACCTGTGATAA+GGG | + | chr2.3:61964573-61964592 | None:intergenic | 40.0% | |
| CTAGAGCTTAATGATATGCC+TGG | - | chr2.3:61964255-61964274 | MS.gene048277:CDS | 40.0% | |
| CTTAGCCCAATTGTCGTAAA+GGG | + | chr2.3:61965699-61965718 | None:intergenic | 40.0% | |
| CTTGCTGAGAGTAGAGAAAA+GGG | - | chr2.3:61966305-61966324 | MS.gene048277:intron | 40.0% | |
| GATAGAGGTTCAGTTTCAGT+TGG | - | chr2.3:61965205-61965224 | MS.gene048277:CDS | 40.0% | |
| GATGGTTATAAGAGGAGTCA+AGG | - | chr2.3:61966382-61966401 | MS.gene048277:intron | 40.0% | |
| GTGGTTACCTTGCATCATAA+AGG | - | chr2.3:61965090-61965109 | MS.gene048277:CDS | 40.0% | |
| GTTCATGCATTCTTGAAGGT+TGG | - | chr2.3:61964439-61964458 | MS.gene048277:intron | 40.0% | |
| TACAAAGTTTCCCCTCTCAA+CGG | + | chr2.3:61964397-61964416 | None:intergenic | 40.0% | |
| TACACCCTTATCACAGGTAA+AGG | - | chr2.3:61964566-61964585 | MS.gene048277:intron | 40.0% | |
| TCTTGCTGAGAGTAGAGAAA+AGG | - | chr2.3:61966304-61966323 | MS.gene048277:intron | 40.0% | |
| TGACCAAGAGAAAGACTCAA+AGG | - | chr2.3:61966136-61966155 | MS.gene048277:intron | 40.0% | |
| TTTACCATGGCTATCTCTTG+TGG | + | chr2.3:61966225-61966244 | None:intergenic | 40.0% | |
| ! | AGAGCATCATTCTGTTCCAA+AGG | - | chr2.3:61964940-61964959 | MS.gene048277:CDS | 40.0% |
| ! | AGAGCATGATGATTTGTACC+AGG | - | chr2.3:61965567-61965586 | MS.gene048277:intron | 40.0% |
| ! | CAACGGACTCATTCATTTGA+AGG | + | chr2.3:61964380-61964399 | None:intergenic | 40.0% |
| ! | CTGTATTGTCAGGGTTTTTG+AGG | - | chr2.3:61965834-61965853 | MS.gene048277:CDS | 40.0% |
| ! | GGCATATCATTAAGCTCTAG+AGG | + | chr2.3:61964255-61964274 | None:intergenic | 40.0% |
| ! | TGCTCTTTTCTGTTGTAACC+GGG | + | chr2.3:61964926-61964945 | None:intergenic | 40.0% |
| !! | AGAAAGTATTCCAGGAAGCA+TGG | - | chr2.3:61966406-61966425 | MS.gene048277:intron | 40.0% |
| !! | GTCAAGGAAGAAAGTATTCC+AGG | - | chr2.3:61966398-61966417 | MS.gene048277:intron | 40.0% |
| !!! | AGGCCACATTTTGAAACAAG+TGG | + | chr2.3:61964189-61964208 | None:intergenic | 40.0% |
| AATGGTCCTACACCTACACT+AGG | - | chr2.3:61964900-61964919 | MS.gene048277:CDS | 45.0% | |
| AGCATGATTCCTGCAGATAG+AGG | - | chr2.3:61965190-61965209 | MS.gene048277:CDS | 45.0% | |
| AGCCATGGTAAAGGATCTCT+TGG | - | chr2.3:61966233-61966252 | MS.gene048277:CDS | 45.0% | |
| AGCTTAGCAGCACAAAGTGA+AGG | + | chr2.3:61964357-61964376 | None:intergenic | 45.0% | |
| ATGAATGAGTCCGTTGAGAG+GGG | - | chr2.3:61964384-61964403 | MS.gene048277:intron | 45.0% | |
| CAGTTGTGGCTGTATTGTCA+GGG | - | chr2.3:61965825-61965844 | MS.gene048277:CDS | 45.0% | |
| CATCGCAAATGGAAGAATCC+AGG | - | chr2.3:61965134-61965153 | MS.gene048277:CDS | 45.0% | |
| CATTTGCGATGCTGAACTTC+CGG | + | chr2.3:61965125-61965144 | None:intergenic | 45.0% | |
| CCCTTATCACAGGTAAAGGA+AGG | - | chr2.3:61964570-61964589 | MS.gene048277:intron | 45.0% | |
| CCTTGCCACAACTTGAAGAT+AGG | + | chr2.3:61965482-61965501 | None:intergenic | 45.0% | |
| GAAACTGAACCTCTATCTGC+AGG | + | chr2.3:61965202-61965221 | None:intergenic | 45.0% | |
| GAGCTTAATGATATGCCTGG+TGG | - | chr2.3:61964258-61964277 | MS.gene048277:CDS | 45.0% | |
| GCCTTCCTTTACCTGTGATA+AGG | + | chr2.3:61964574-61964593 | None:intergenic | 45.0% | |
| GGCACTTCATAAGAGACAGA+TGG | - | chr2.3:61964829-61964848 | MS.gene048277:CDS | 45.0% | |
| GTTCTTCCACCACAGCTAAT+TGG | - | chr2.3:61965040-61965059 | MS.gene048277:CDS | 45.0% | |
| GTTGAGAGGGGAAACTTTGT+AGG | - | chr2.3:61964396-61964415 | MS.gene048277:intron | 45.0% | |
| TCAAAAGCTTCTGATCCACC+AGG | + | chr2.3:61964276-61964295 | None:intergenic | 45.0% | |
| TGCTCTAATCTGCCAATAGC+TGG | + | chr2.3:61965553-61965572 | None:intergenic | 45.0% | |
| TTCTCTACTCTCAGCAAGAG+AGG | + | chr2.3:61966303-61966322 | None:intergenic | 45.0% | |
| ! | GCTGAAAGTGTACCAGCTAT+TGG | - | chr2.3:61965538-61965557 | MS.gene048277:intron | 45.0% |
| !! | AAGAATCTACCCTGGTTCTG+TGG | - | chr2.3:61965402-61965421 | MS.gene048277:intron | 45.0% |
| !! | CCTATCTTCAAGTTGTGGCA+AGG | - | chr2.3:61965479-61965498 | MS.gene048277:intron | 45.0% |
| CCAAGATTCTCAGACCACTC+TGG | + | chr2.3:61964504-61964523 | None:intergenic | 50.0% | |
| CCACTCTGGTAACTTCTCAG+TGG | + | chr2.3:61964490-61964509 | None:intergenic | 50.0% | |
| CCACTGAGAAGTTACCAGAG+TGG | - | chr2.3:61964487-61964506 | MS.gene048277:intron | 50.0% | |
| CCAGAGTGGTCTGAGAATCT+TGG | - | chr2.3:61964501-61964520 | MS.gene048277:intron | 50.0% | |
| CGGAAGTTCAGCATCGCAAA+TGG | - | chr2.3:61965123-61965142 | MS.gene048277:CDS | 50.0% | |
| GCACTTCAGGGGACAATCTT+TGG | + | chr2.3:61966055-61966074 | None:intergenic | 50.0% | |
| GCAGTTGTGGCTGTATTGTC+AGG | - | chr2.3:61965824-61965843 | MS.gene048277:CDS | 50.0% | |
| GCTTCACCAATTAGCTGTGG+TGG | + | chr2.3:61965049-61965068 | None:intergenic | 50.0% | |
| GGCCAAGAGATCCTTTACCA+TGG | + | chr2.3:61966238-61966257 | None:intergenic | 50.0% | |
| TCCAAGTTCACCATGCTTCC+TGG | + | chr2.3:61966419-61966438 | None:intergenic | 50.0% | |
| TCCTCAGTCCACCAATCCTT+TGG | + | chr2.3:61964959-61964978 | None:intergenic | 50.0% | |
| TCCTGTTGTCCACAGAACCA+GGG | + | chr2.3:61965414-61965433 | None:intergenic | 50.0% | |
| TCTACACGGAACAAGCTACC+AGG | - | chr2.3:61963830-61963849 | MS.gene048277:CDS | 50.0% | |
| TTCCTGTTGTCCACAGAACC+AGG | + | chr2.3:61965415-61965434 | None:intergenic | 50.0% | |
| ! | TCCAGGAAGCATGGTGAACT+TGG | - | chr2.3:61966415-61966434 | MS.gene048277:intron | 50.0% |
| !! | AGGATCTCTTGGCCTTGACA+AGG | - | chr2.3:61966244-61966263 | MS.gene048277:CDS | 50.0% |
| !! | CGGAAAAGAAGCGCTTGTGT+GGG | - | chr2.3:61966018-61966037 | MS.gene048277:CDS | 50.0% |
| !! | TCCAAAGGATTGGTGGACTG+AGG | - | chr2.3:61964955-61964974 | MS.gene048277:CDS | 50.0% |
| AGTGGCGTGCAACGTTGCAA+TGG | + | chr2.3:61964472-61964491 | None:intergenic | 55.0% | |
| CCATGGCTATCTCTTGTGGC+AGG | + | chr2.3:61966221-61966240 | None:intergenic | 55.0% | |
| CCTGCCACAAGAGATAGCCA+TGG | - | chr2.3:61966218-61966237 | MS.gene048277:CDS | 55.0% | |
| GCATTCGGACTTGAGCAAGG+CGG | - | chr2.3:61965998-61966017 | MS.gene048277:CDS | 55.0% | |
| GGTGCATTCGGACTTGAGCA+AGG | - | chr2.3:61965995-61966014 | MS.gene048277:CDS | 55.0% | |
| GTTGTAACCGGGCCTAGTGT+AGG | + | chr2.3:61964915-61964934 | None:intergenic | 55.0% | |
| TCCTACACCTACACTAGGCC+CGG | - | chr2.3:61964905-61964924 | MS.gene048277:CDS | 55.0% | |
| !! | ACCCTGGTTCTGTGGACAAC+AGG | - | chr2.3:61965410-61965429 | MS.gene048277:intron | 55.0% |
| !! | GCGGAAAAGAAGCGCTTGTG+TGG | - | chr2.3:61966017-61966036 | MS.gene048277:CDS | 55.0% |
| ACCGGGCCTAGTGTAGGTGT+AGG | + | chr2.3:61964909-61964928 | None:intergenic | 60.0% | |
| ACGGTCTGCGACTGCAGTTG+TGG | - | chr2.3:61965811-61965830 | MS.gene048277:CDS | 60.0% | |
| ACAGCGTGCGCACGCACTTC+AGG | + | chr2.3:61966068-61966087 | None:intergenic | 65.0% | |
| AGCGTGCGCACGCACTTCAG+GGG | + | chr2.3:61966066-61966085 | None:intergenic | 65.0% | |
| CAGCGTGCGCACGCACTTCA+GGG | + | chr2.3:61966067-61966086 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 61963793 | 61966508 | 61963793 | ID=MS.gene048277 |
| chr2.3 | mRNA | 61963793 | 61966508 | 61963793 | ID=MS.gene048277.t1;Parent=MS.gene048277 |
| chr2.3 | exon | 61966450 | 61966508 | 61966450 | ID=MS.gene048277.t1.exon1;Parent=MS.gene048277.t1 |
| chr2.3 | CDS | 61966450 | 61966508 | 61966450 | ID=cds.MS.gene048277.t1;Parent=MS.gene048277.t1 |
| chr2.3 | exon | 61966209 | 61966278 | 61966209 | ID=MS.gene048277.t1.exon2;Parent=MS.gene048277.t1 |
| chr2.3 | CDS | 61966209 | 61966278 | 61966209 | ID=cds.MS.gene048277.t1;Parent=MS.gene048277.t1 |
| chr2.3 | exon | 61965720 | 61966118 | 61965720 | ID=MS.gene048277.t1.exon3;Parent=MS.gene048277.t1 |
| chr2.3 | CDS | 61965720 | 61966118 | 61965720 | ID=cds.MS.gene048277.t1;Parent=MS.gene048277.t1 |
| chr2.3 | exon | 61964692 | 61965405 | 61964692 | ID=MS.gene048277.t1.exon4;Parent=MS.gene048277.t1 |
| chr2.3 | CDS | 61964692 | 61965405 | 61964692 | ID=cds.MS.gene048277.t1;Parent=MS.gene048277.t1 |
| chr2.3 | exon | 61963793 | 61964305 | 61963793 | ID=MS.gene048277.t1.exon5;Parent=MS.gene048277.t1 |
| chr2.3 | CDS | 61963793 | 61964305 | 61963793 | ID=cds.MS.gene048277.t1;Parent=MS.gene048277.t1 |
| Gene Sequence |
| Protein sequence |
