Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04829.t1 | XP_013449828.1 | 95.2 | 503 | 24 | 0 | 1 | 503 | 1 | 503 | 2.10E-292 | 1014.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04829.t1 | Q3EBR6 | 55.5 | 447 | 188 | 7 | 58 | 497 | 83 | 525 | 4.1e-148 | 526.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04829.t1 | A0A072U3F4 | 95.2 | 503 | 24 | 0 | 1 | 503 | 1 | 503 | 1.5e-292 | 1014.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene28990 | MS.gene04829 | PPI |
| MS.gene04829 | MS.gene052346 | PPI |
| MS.gene04829 | MS.gene006510 | PPI |
| MS.gene031785 | MS.gene04829 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04829.t1 | MTR_7g096120 | 95.229 | 503 | 24 | 0 | 1 | 503 | 1 | 503 | 0.0 | 990 |
| MS.gene04829.t1 | MTR_7g096140 | 94.978 | 458 | 23 | 0 | 1 | 458 | 1 | 458 | 0.0 | 883 |
| MS.gene04829.t1 | MTR_4g077070 | 54.206 | 428 | 182 | 9 | 73 | 495 | 99 | 517 | 3.28e-167 | 483 |
| MS.gene04829.t1 | MTR_1995s0010 | 95.964 | 223 | 9 | 0 | 197 | 419 | 1 | 223 | 4.24e-159 | 451 |
| MS.gene04829.t1 | MTR_2g015690 | 40.686 | 408 | 214 | 5 | 74 | 474 | 20 | 406 | 3.86e-100 | 307 |
| MS.gene04829.t1 | MTR_4g087810 | 39.430 | 421 | 218 | 8 | 74 | 488 | 13 | 402 | 5.42e-96 | 296 |
| MS.gene04829.t1 | MTR_4g087830 | 38.480 | 421 | 222 | 8 | 74 | 488 | 4 | 393 | 1.46e-94 | 293 |
| MS.gene04829.t1 | MTR_7g006400 | 41.761 | 352 | 173 | 10 | 74 | 418 | 105 | 431 | 4.10e-84 | 269 |
| MS.gene04829.t1 | MTR_5g013230 | 39.578 | 379 | 196 | 11 | 74 | 437 | 135 | 495 | 3.70e-81 | 263 |
| MS.gene04829.t1 | MTR_4g080100 | 33.556 | 450 | 244 | 7 | 52 | 475 | 10 | 430 | 3.92e-81 | 259 |
| MS.gene04829.t1 | MTR_7g081645 | 38.235 | 374 | 189 | 12 | 74 | 434 | 75 | 419 | 3.02e-77 | 249 |
| MS.gene04829.t1 | MTR_7g081620 | 34.549 | 466 | 242 | 15 | 10 | 438 | 11 | 450 | 3.26e-75 | 244 |
| MS.gene04829.t1 | MTR_4g099510 | 39.024 | 369 | 195 | 9 | 78 | 437 | 133 | 480 | 2.83e-71 | 236 |
| MS.gene04829.t1 | MTR_2g020020 | 34.940 | 166 | 80 | 7 | 198 | 359 | 98 | 239 | 1.60e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04829.t1 | AT2G30550 | 55.481 | 447 | 188 | 7 | 58 | 497 | 83 | 525 | 0.0 | 523 |
| MS.gene04829.t1 | AT1G06800 | 57.009 | 428 | 174 | 7 | 74 | 495 | 85 | 508 | 0.0 | 518 |
| MS.gene04829.t1 | AT2G30550 | 57.682 | 371 | 146 | 7 | 58 | 421 | 83 | 449 | 2.41e-156 | 453 |
| MS.gene04829.t1 | AT1G51440 | 49.312 | 509 | 211 | 12 | 23 | 495 | 16 | 513 | 3.16e-156 | 455 |
| MS.gene04829.t1 | AT1G06800 | 59.207 | 353 | 134 | 7 | 74 | 420 | 85 | 433 | 7.21e-154 | 446 |
| MS.gene04829.t1 | AT1G30370 | 42.469 | 405 | 216 | 7 | 74 | 473 | 114 | 506 | 9.84e-109 | 333 |
| MS.gene04829.t1 | AT1G05800 | 43.059 | 353 | 176 | 8 | 72 | 419 | 78 | 410 | 2.31e-92 | 289 |
| MS.gene04829.t1 | AT1G06250 | 37.805 | 410 | 224 | 6 | 74 | 474 | 5 | 392 | 1.15e-87 | 276 |
| MS.gene04829.t1 | AT2G31690 | 41.417 | 367 | 193 | 9 | 66 | 427 | 80 | 429 | 1.22e-87 | 278 |
| MS.gene04829.t1 | AT4G18550 | 36.029 | 408 | 232 | 4 | 76 | 475 | 21 | 407 | 1.91e-87 | 275 |
| MS.gene04829.t1 | AT4G18550 | 36.029 | 408 | 232 | 4 | 76 | 475 | 38 | 424 | 3.26e-87 | 275 |
| MS.gene04829.t1 | AT2G42690 | 35.308 | 422 | 224 | 6 | 77 | 475 | 7 | 402 | 7.57e-83 | 263 |
| MS.gene04829.t1 | AT4G16820 | 39.512 | 410 | 207 | 13 | 41 | 436 | 96 | 478 | 6.45e-78 | 253 |
| MS.gene04829.t1 | AT2G44810 | 35.938 | 384 | 207 | 10 | 70 | 434 | 80 | 443 | 3.48e-77 | 249 |
| MS.gene04829.t1 | AT2G44810 | 37.027 | 370 | 196 | 9 | 82 | 434 | 4 | 353 | 8.44e-77 | 245 |
| MS.gene04829.t1 | AT4G18550 | 37.818 | 275 | 165 | 2 | 76 | 344 | 38 | 312 | 1.75e-63 | 209 |
| MS.gene04829.t1 | AT1G06250 | 36.455 | 299 | 164 | 3 | 181 | 474 | 1 | 278 | 1.01e-59 | 199 |
Find 120 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAGATTGGAGAAACATTT+AGG | 0.169595 | 7.4:-13233894 | MS.gene04829:CDS |
| ATTAGTTCGGATCGCATTAT+TGG | 0.222517 | 7.4:+13234853 | None:intergenic |
| TATCTTGGTAAAGAGGTTTA+AGG | 0.239651 | 7.4:+13234231 | None:intergenic |
| TTCAAATCTTGCCTCCAATT+TGG | 0.241101 | 7.4:+13232179 | None:intergenic |
| CGAGATTTCTTAAAGAAATC+TGG | 0.241938 | 7.4:+13234658 | None:intergenic |
| GGACATTGCTTTGGTGAATA+AGG | 0.258869 | 7.4:-13232237 | MS.gene04829:CDS |
| AAGAAAGTGGATTCGGATTT+GGG | 0.266472 | 7.4:+13235102 | None:intergenic |
| GAAGAAAGTGGATTCGGATT+TGG | 0.267139 | 7.4:+13235101 | None:intergenic |
| GTTGGGAACATGAAATTTAA+AGG | 0.267233 | 7.4:-13233915 | MS.gene04829:CDS |
| GGGTTAAATGTTAGGGAAAA+TGG | 0.274934 | 7.4:-13233981 | MS.gene04829:CDS |
| TTGTGTAATGGTGTTGATTT+GGG | 0.277245 | 7.4:+13234990 | None:intergenic |
| CAGAAACAGGGTTAAATGTT+AGG | 0.283257 | 7.4:-13233989 | MS.gene04829:CDS |
| GATATGAAGCAACCACTAAT+AGG | 0.305971 | 7.4:-13232259 | MS.gene04829:CDS |
| CTCGATGGCCAGATAAATAT+TGG | 0.316448 | 7.4:-13234639 | MS.gene04829:CDS |
| CATGAAATTTAAAGGGAGAT+TGG | 0.327254 | 7.4:-13233907 | MS.gene04829:CDS |
| GGAGATTGGAGAAACATTTA+GGG | 0.327887 | 7.4:-13233893 | MS.gene04829:CDS |
| GTTGTGTAATGGTGTTGATT+TGG | 0.336507 | 7.4:+13234989 | None:intergenic |
| GGGTTTGTGGGTTTGTTGTT+TGG | 0.343105 | 7.4:+13235049 | None:intergenic |
| TCCGAATCCACTTTCTTCTT+CGG | 0.346871 | 7.4:-13235096 | MS.gene04829:CDS |
| ATTGGAGCGAACACGCGAAT+TGG | 0.349997 | 7.4:-13234621 | MS.gene04829:CDS |
| GCAAGATTTGAATAGGAATA+TGG | 0.354087 | 7.4:-13232168 | MS.gene04829:CDS |
| GCGTTTGATATAGCAGAAAC+AGG | 0.357748 | 7.4:-13234002 | MS.gene04829:CDS |
| AGCACTCTGTGCCACCAAAT+TGG | 0.358258 | 7.4:-13232193 | MS.gene04829:CDS |
| GAAGTTAGTATTACGTTAAC+GGG | 0.360874 | 7.4:-13234059 | MS.gene04829:CDS |
| TTAGTTCGGATCGCATTATT+GGG | 0.370755 | 7.4:+13234854 | None:intergenic |
| ATTGGAGGCAAGATTTGAAT+AGG | 0.374370 | 7.4:-13232175 | MS.gene04829:CDS |
| ACGTTAACGGGACATAGTTT+AGG | 0.375765 | 7.4:-13234047 | MS.gene04829:CDS |
| TGTTCGCTCCAATATTTATC+TGG | 0.378386 | 7.4:+13234631 | None:intergenic |
| AAAATCAAATGCATCATAAC+AGG | 0.381110 | 7.4:+13234807 | None:intergenic |
| AAATCCACGGTGAAGATGAT+TGG | 0.395504 | 7.4:-13234900 | MS.gene04829:CDS |
| GCACATGCAGCATCAGCATT+AGG | 0.397000 | 7.4:+13233690 | None:intergenic |
| ATAAGAAACCCTGGTGACTT+TGG | 0.419814 | 7.4:+13233831 | None:intergenic |
| TTACCAAGATATTCCTTGTC+CGG | 0.425973 | 7.4:-13234219 | MS.gene04829:CDS |
| TTGGGAACATGAAATTTAAA+GGG | 0.429025 | 7.4:-13233914 | MS.gene04829:CDS |
| CACTAATAGGGACATTGCTT+TGG | 0.430429 | 7.4:-13232246 | MS.gene04829:CDS |
| CAAAGCAATGTCCCTATTAG+TGG | 0.431741 | 7.4:+13232247 | None:intergenic |
| TCCGAAGAAGAAAGTGGATT+CGG | 0.434609 | 7.4:+13235095 | None:intergenic |
| GGTTTGTTGTTTGGAATTTG+AGG | 0.434688 | 7.4:+13235058 | None:intergenic |
| GAGCCTTATCTCTCCAAGAT+AGG | 0.435221 | 7.4:-13232074 | MS.gene04829:CDS |
| GGTTCATAATAAGCATGATA+TGG | 0.439973 | 7.4:-13233856 | MS.gene04829:CDS |
| TGCTGCATGTGCTCATAACT+TGG | 0.440073 | 7.4:-13233679 | MS.gene04829:CDS |
| TGAAGAGATGAGTCCTATCT+TGG | 0.442304 | 7.4:+13232061 | None:intergenic |
| AGAAACAGGGTTAAATGTTA+GGG | 0.448099 | 7.4:-13233988 | MS.gene04829:CDS |
| TAACATTTGCTGTGGCATAT+AGG | 0.457324 | 7.4:+13234686 | None:intergenic |
| AGAAGTTAGTATTACGTTAA+CGG | 0.458390 | 7.4:-13234060 | MS.gene04829:CDS |
| TTGTGATTGGAGTTGTGTAA+TGG | 0.458559 | 7.4:+13234978 | None:intergenic |
| CAAGGAATATCTTGGTAAAG+AGG | 0.459874 | 7.4:+13234224 | None:intergenic |
| AAATGCATCATAACAGGCTT+GGG | 0.461251 | 7.4:+13234813 | None:intergenic |
| CAAATGCATCATAACAGGCT+TGG | 0.470701 | 7.4:+13234812 | None:intergenic |
| CCCTAAAACTTGTTCTCTTG+CGG | 0.472497 | 7.4:+13234118 | None:intergenic |
| GATCGCATTATTGGGTCCAT+TGG | 0.473058 | 7.4:+13234862 | None:intergenic |
| CATATCCACGGTTGCTCCCA+TGG | 0.475119 | 7.4:+13232276 | None:intergenic |
| GCAGAGACATTGTTATTGCT+TGG | 0.475619 | 7.4:-13234301 | MS.gene04829:CDS |
| GTAATACTAACTTCTTCATC+AGG | 0.475955 | 7.4:+13234068 | None:intergenic |
| TCTACTCGAACGTCGTTGTC+CGG | 0.476225 | 7.4:+13234200 | None:intergenic |
| CGAAGATGGACGTTGGGTGC+TGG | 0.476306 | 7.4:-13232138 | MS.gene04829:CDS |
| AATCCACGGTGAAGATGATT+GGG | 0.485607 | 7.4:-13234899 | MS.gene04829:CDS |
| TGTTGCTTCATCGTTTGAAA+CGG | 0.487757 | 7.4:+13234585 | None:intergenic |
| CAGCACCCAACGTCCATCTT+CGG | 0.497295 | 7.4:+13232139 | None:intergenic |
| AAATCTTGCCTCCAATTTGG+TGG | 0.500957 | 7.4:+13232182 | None:intergenic |
| TTCTCCGTAACGGATTAGTT+CGG | 0.501522 | 7.4:+13234840 | None:intergenic |
| CGTTAGATCTTCCACACATA+GGG | 0.505096 | 7.4:-13234726 | MS.gene04829:CDS |
| GAGATTTCTTAAAGAAATCT+GGG | 0.505416 | 7.4:+13234659 | None:intergenic |
| AACCGTTACTCATGTCGAAT+GGG | 0.510098 | 7.4:-13234273 | MS.gene04829:CDS |
| GAGCGAACACGCGAATTGGA+TGG | 0.515578 | 7.4:-13234617 | MS.gene04829:CDS |
| TGTTTGGAATTTGAGGTGGT+TGG | 0.521451 | 7.4:+13235065 | None:intergenic |
| GATATGGTGCCAAAGTCACC+AGG | 0.523665 | 7.4:-13233840 | MS.gene04829:CDS |
| TGTCCGGACAAGGAATATCT+TGG | 0.524914 | 7.4:+13234216 | None:intergenic |
| TGTTGGAGTTGAGTTAGAGT+TGG | 0.525724 | 7.4:-13233739 | MS.gene04829:CDS |
| AGCGAACACGCGAATTGGAT+GGG | 0.532329 | 7.4:-13234616 | MS.gene04829:CDS |
| AATATGGTGAAGACCGAAGA+TGG | 0.533831 | 7.4:-13232152 | MS.gene04829:CDS |
| TAGTGGTTGCTTCATATCCA+CGG | 0.536813 | 7.4:+13232264 | None:intergenic |
| ATATGAAGCAACCACTAATA+GGG | 0.537930 | 7.4:-13232258 | MS.gene04829:CDS |
| TTCTCGATATGTACACCGAC+AGG | 0.537974 | 7.4:-13234169 | MS.gene04829:CDS |
| GATGAGTATCTGCAAGTTGT+GGG | 0.543513 | 7.4:+13232108 | None:intergenic |
| CCATGGTGTTATACTCATGT+TGG | 0.543800 | 7.4:-13233756 | MS.gene04829:CDS |
| AGTCCTATCTTGGAGAGATA+AGG | 0.544852 | 7.4:+13232071 | None:intergenic |
| GGTTGGACTTCTAGATCCAA+TGG | 0.547144 | 7.4:-13234878 | MS.gene04829:CDS |
| CTGAGGATATTGATATTCCA+TGG | 0.547347 | 7.4:-13233773 | MS.gene04829:CDS |
| AATTTCATGTTCCCAACCCT+AGG | 0.550462 | 7.4:+13233921 | None:intergenic |
| CGAACGTCGTTGTCCGGACA+AGG | 0.552198 | 7.4:+13234206 | None:intergenic |
| AGTGGATTCGGATTTGGGAA+AGG | 0.556138 | 7.4:+13235107 | None:intergenic |
| TGCATGTGCTCATAACTTGG+AGG | 0.557550 | 7.4:-13233676 | MS.gene04829:CDS |
| TCGTTAGATCTTCCACACAT+AGG | 0.560088 | 7.4:-13234727 | MS.gene04829:CDS |
| TGATGATGAGCAGGTACCAT+GGG | 0.560215 | 7.4:-13232292 | MS.gene04829:intron |
| ACTCTGTGCCACCAAATTGG+AGG | 0.560687 | 7.4:-13232190 | MS.gene04829:CDS |
| GAACCGTTACTCATGTCGAA+TGG | 0.561270 | 7.4:-13234274 | MS.gene04829:CDS |
| AATGGTGTTGATTTGGGATG+CGG | 0.561445 | 7.4:+13234996 | None:intergenic |
| ATTGAATCCGAAGAAGAAAG+TGG | 0.561829 | 7.4:+13235089 | None:intergenic |
| GATCCATATTCAAAATATTG+TGG | 0.563766 | 7.4:-13234784 | MS.gene04829:CDS |
| ACCCATCGAGTATGTGCAAG+TGG | 0.565551 | 7.4:+13233652 | None:intergenic |
| GCCCACTTGCACATACTCGA+TGG | 0.566632 | 7.4:-13233654 | MS.gene04829:CDS |
| CACGGTGAAGATGATTGGGT+TGG | 0.567726 | 7.4:-13234895 | MS.gene04829:CDS |
| CGATCCGAACTAATCCGTTA+CGG | 0.571824 | 7.4:-13234844 | MS.gene04829:CDS |
| GACATTGTTATTGCTTGGCG+AGG | 0.572632 | 7.4:-13234296 | MS.gene04829:CDS |
| GAAGACCGAAGATGGACGTT+GGG | 0.573919 | 7.4:-13232144 | MS.gene04829:CDS |
| TTCTCATTAATAAGAAACCC+TGG | 0.577571 | 7.4:+13233822 | None:intergenic |
| TTGTTGTTTGGAATTTGAGG+TGG | 0.580769 | 7.4:+13235061 | None:intergenic |
| AACGACGTTCGAGTAGAAGC+AGG | 0.582473 | 7.4:-13234194 | MS.gene04829:CDS |
| TGATGAGTATCTGCAAGTTG+TGG | 0.587655 | 7.4:+13232107 | None:intergenic |
| ACATAGTTTAGGAAGTGCTA+TGG | 0.599721 | 7.4:-13234036 | MS.gene04829:CDS |
| GTGGTTATTAAAGTTTGCTG+AGG | 0.600416 | 7.4:-13233790 | MS.gene04829:CDS |
| CGTTTGATATAGCAGAAACA+GGG | 0.608919 | 7.4:-13234001 | MS.gene04829:CDS |
| TGTGTGGAAGATCTAACGAT+GGG | 0.619407 | 7.4:+13234731 | None:intergenic |
| CCCACTTGCACATACTCGAT+GGG | 0.620876 | 7.4:-13233653 | MS.gene04829:intron |
| TTGATGATGAGCAGGTACCA+TGG | 0.623853 | 7.4:-13232293 | MS.gene04829:intron |
| TACCCATTCGACATGAGTAA+CGG | 0.630242 | 7.4:+13234271 | None:intergenic |
| TGGGACGTTAACATTTGCTG+TGG | 0.639988 | 7.4:+13234678 | None:intergenic |
| AGGTACCATGGGAGCAACCG+TGG | 0.651704 | 7.4:-13232281 | MS.gene04829:CDS |
| GTTACGTCATACCCTATGTG+TGG | 0.653846 | 7.4:+13234715 | None:intergenic |
| GAGATTGGAGAAACATTTAG+GGG | 0.658549 | 7.4:-13233892 | MS.gene04829:CDS |
| ATTTCTTTAAGAAATCTCGA+TGG | 0.659322 | 7.4:-13234654 | MS.gene04829:CDS |
| CCCATCGAGTATGTGCAAGT+GGG | 0.660658 | 7.4:+13233653 | None:intergenic |
| TTAATGAGAAATCGCCTGAG+TGG | 0.664008 | 7.4:-13233809 | MS.gene04829:CDS |
| GCAAACTTTAATAACCACTC+AGG | 0.666053 | 7.4:+13233795 | None:intergenic |
| ATGTGTGGAAGATCTAACGA+TGG | 0.689828 | 7.4:+13234730 | None:intergenic |
| CCAACATGAGTATAACACCA+TGG | 0.694193 | 7.4:+13233756 | None:intergenic |
| TGAAGACCGAAGATGGACGT+TGG | 0.699979 | 7.4:-13232145 | MS.gene04829:CDS |
| CAACCCAATCATCTTCACCG+TGG | 0.749438 | 7.4:+13234896 | None:intergenic |
| ATATGGTGCCAAAGTCACCA+GGG | 0.760395 | 7.4:-13233839 | MS.gene04829:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTAAAAAATTTAAATATG+GGG | - | chr7.4:13233872-13233891 | MS.gene04829:CDS | 10.0% |
| !! | CAAACTAAAAAATTTAAATA+TGG | - | chr7.4:13233870-13233889 | MS.gene04829:CDS | 10.0% |
| !!! | AAGAATAATGTTTATAATTT+TGG | - | chr7.4:13234753-13234772 | MS.gene04829:CDS | 10.0% |
| !! | ACTAAAAAATTTAAATATGG+GGG | - | chr7.4:13233873-13233892 | MS.gene04829:CDS | 15.0% |
| !! | CATATATAGTGTAAAAAAAA+AGG | - | chr7.4:13234162-13234181 | MS.gene04829:CDS | 15.0% |
| !! | TGATTCCAAATATAAAAATA+TGG | + | chr7.4:13233734-13233753 | None:intergenic | 15.0% |
| !! | TTCAAACATAAATAACATTA+GGG | + | chr7.4:13232855-13232874 | None:intergenic | 15.0% |
| !! | TTTCAAACATAAATAACATT+AGG | + | chr7.4:13232856-13232875 | None:intergenic | 15.0% |
| !!! | GATATATTTAGTTCAAATTT+TGG | + | chr7.4:13232746-13232765 | None:intergenic | 15.0% |
| !!! | TGAGTATTTGATTTTTTAAT+AGG | - | chr7.4:13234265-13234284 | MS.gene04829:CDS | 15.0% |
| !!! | TTATGTTAACTATTTTTGAA+TGG | - | chr7.4:13234829-13234848 | MS.gene04829:CDS | 15.0% |
| !!! | TTTAGAATGATACATTTTTT+TGG | + | chr7.4:13234570-13234589 | None:intergenic | 15.0% |
| !!! | TTTTTAAGCAAAAAGATTAT+GGG | - | chr7.4:13233945-13233964 | MS.gene04829:CDS | 15.0% |
| !!! | TTTTTTAAGCAAAAAGATTA+TGG | - | chr7.4:13233944-13233963 | MS.gene04829:CDS | 15.0% |
| !! | AAAATGAAAAAACAGAAACA+TGG | + | chr7.4:13233241-13233260 | None:intergenic | 20.0% |
| !! | AATAACGAAAAACATTTGTT+CGG | + | chr7.4:13234048-13234067 | None:intergenic | 20.0% |
| !! | AATGGCAAAATTTGTATATA+TGG | - | chr7.4:13234847-13234866 | MS.gene04829:CDS | 20.0% |
| !! | ACAAATGCATAATATATGAA+GGG | - | chr7.4:13234469-13234488 | MS.gene04829:intron | 20.0% |
| !! | ATATATTTAATACATGCATG+AGG | + | chr7.4:13232684-13232703 | None:intergenic | 20.0% |
| !! | ATGGCAAAATTTGTATATAT+GGG | - | chr7.4:13234848-13234867 | MS.gene04829:CDS | 20.0% |
| !! | TATATTTAATACATGCATGA+GGG | + | chr7.4:13232683-13232702 | None:intergenic | 20.0% |
| !!! | ACATAGCTAGTAATTTTATT+TGG | + | chr7.4:13234350-13234369 | None:intergenic | 20.0% |
| !!! | ATATTTTGCAAATGAACTTT+TGG | - | chr7.4:13232811-13232830 | MS.gene04829:intron | 20.0% |
| !!! | CAAATGTTTTTCGTTATTTA+TGG | - | chr7.4:13234050-13234069 | MS.gene04829:CDS | 20.0% |
| !!! | CACTACCATATTTTTATATT+TGG | - | chr7.4:13233726-13233745 | MS.gene04829:CDS | 20.0% |
| !!! | GATTTTATTTTCAATTCTAC+TGG | + | chr7.4:13234096-13234115 | None:intergenic | 20.0% |
| !!! | TATTTATGTTTGAAACTAAC+AGG | - | chr7.4:13232861-13232880 | MS.gene04829:intron | 20.0% |
| !!! | TTATGAGTATATTTTGAGAT+CGG | - | chr7.4:13232783-13232802 | MS.gene04829:intron | 20.0% |
| !!! | TTTAAGGTAATTTTGAAGAT+TGG | + | chr7.4:13232943-13232962 | None:intergenic | 20.0% |
| !!! | TTTTAAGCAAAAAGATTATG+GGG | - | chr7.4:13233946-13233965 | MS.gene04829:CDS | 20.0% |
| !!! | TTTTTTACACTATATATGTC+TGG | + | chr7.4:13234160-13234179 | None:intergenic | 20.0% |
| ! | AAAATCAAATGCATCATAAC+AGG | + | chr7.4:13232383-13232402 | None:intergenic | 25.0% |
| ! | AGAAGTTAGTATTACGTTAA+CGG | - | chr7.4:13233127-13233146 | MS.gene04829:intron | 25.0% |
| ! | CAAATGCATAATATATGAAG+GGG | - | chr7.4:13234470-13234489 | MS.gene04829:intron | 25.0% |
| ! | GACAAATGCATAATATATGA+AGG | - | chr7.4:13234468-13234487 | MS.gene04829:intron | 25.0% |
| ! | GAGATTTCTTAAAGAAATCT+GGG | + | chr7.4:13232531-13232550 | None:intergenic | 25.0% |
| ! | GATCCATATTCAAAATATTG+TGG | - | chr7.4:13232403-13232422 | MS.gene04829:intron | 25.0% |
| ! | TTGGGAACATGAAATTTAAA+GGG | - | chr7.4:13233273-13233292 | MS.gene04829:intron | 25.0% |
| !! | ACATTTTAAATATGGAGAAG+TGG | + | chr7.4:13234520-13234539 | None:intergenic | 25.0% |
| !! | ATTTCTTTAAGAAATCTCGA+TGG | - | chr7.4:13232533-13232552 | MS.gene04829:intron | 25.0% |
| !! | TCAAAAATGGAGAAATTTTG+TGG | + | chr7.4:13233475-13233494 | None:intergenic | 25.0% |
| !!! | ATTGTTTTGTGTTTTGTGAT+TGG | + | chr7.4:13232225-13232244 | None:intergenic | 25.0% |
| !!! | ATTTGTTGCTTTTGATTCAT+AGG | + | chr7.4:13234809-13234828 | None:intergenic | 25.0% |
| !!! | CTACCACAATATTTTGAATA+TGG | + | chr7.4:13232409-13232428 | None:intergenic | 25.0% |
| !!! | GATTATTTGTGATTTGTTGA+TGG | - | chr7.4:13234674-13234693 | MS.gene04829:CDS | 25.0% |
| !!! | GTTTCTGTTTTTTCATTTTC+TGG | - | chr7.4:13233242-13233261 | MS.gene04829:intron | 25.0% |
| AGAAACAGGGTTAAATGTTA+GGG | - | chr7.4:13233199-13233218 | MS.gene04829:intron | 30.0% | |
| ATATGAAGCAACCACTAATA+GGG | - | chr7.4:13234929-13234948 | MS.gene04829:CDS | 30.0% | |
| CATGAAATTTAAAGGGAGAT+TGG | - | chr7.4:13233280-13233299 | MS.gene04829:intron | 30.0% | |
| CGAGATTTCTTAAAGAAATC+TGG | + | chr7.4:13232532-13232551 | None:intergenic | 30.0% | |
| CTTCGATTGAATTGATTGAT+AGG | - | chr7.4:13233620-13233639 | MS.gene04829:intron | 30.0% | |
| GAAGTTAGTATTACGTTAAC+GGG | - | chr7.4:13233128-13233147 | MS.gene04829:intron | 30.0% | |
| GATGAAGCAACACAAAAAAT+CGG | - | chr7.4:13232613-13232632 | MS.gene04829:intron | 30.0% | |
| GCAAGATTTGAATAGGAATA+TGG | - | chr7.4:13235019-13235038 | MS.gene04829:CDS | 30.0% | |
| GGTTCATAATAAGCATGATA+TGG | - | chr7.4:13233331-13233350 | MS.gene04829:intron | 30.0% | |
| GTAATACTAACTTCTTCATC+AGG | + | chr7.4:13233122-13233141 | None:intergenic | 30.0% | |
| GTTGGGAACATGAAATTTAA+AGG | - | chr7.4:13233272-13233291 | MS.gene04829:intron | 30.0% | |
| TATCTTGGTAAAGAGGTTTA+AGG | + | chr7.4:13232959-13232978 | None:intergenic | 30.0% | |
| TCAGCATTAGGATTCAAAAA+TGG | + | chr7.4:13233488-13233507 | None:intergenic | 30.0% | |
| TTCTCATTAATAAGAAACCC+TGG | + | chr7.4:13233368-13233387 | None:intergenic | 30.0% | |
| ! | ATTTAGGGGTTAAGATTTTG+AGG | - | chr7.4:13233309-13233328 | MS.gene04829:intron | 30.0% |
| ! | GAGCTCACACATTTTAAATA+TGG | + | chr7.4:13234528-13234547 | None:intergenic | 30.0% |
| ! | TTTAGGGGTTAAGATTTTGA+GGG | - | chr7.4:13233310-13233329 | MS.gene04829:intron | 30.0% |
| ! | TTTTTCATTTTCTGGACCTA+GGG | - | chr7.4:13233250-13233269 | MS.gene04829:intron | 30.0% |
| !! | TTGTGTAATGGTGTTGATTT+GGG | + | chr7.4:13232200-13232219 | None:intergenic | 30.0% |
| !!! | CATTTGTTCGGTTTTGAAAT+AGG | + | chr7.4:13234036-13234055 | None:intergenic | 30.0% |
| !!! | GGTGAGTTTTTTTGTTGTTA+GGG | + | chr7.4:13232161-13232180 | None:intergenic | 30.0% |
| !!! | TGGTGAGTTTTTTTGTTGTT+AGG | + | chr7.4:13232162-13232181 | None:intergenic | 30.0% |
| !!! | TTTTGAAATAGGATTCTTGC+CGG | + | chr7.4:13234025-13234044 | None:intergenic | 30.0% |
| !!! | TTTTTGTTGTTAGGGTTTGT+GGG | + | chr7.4:13232153-13232172 | None:intergenic | 30.0% |
| !!! | TTTTTTCATTTTCTGGACCT+AGG | - | chr7.4:13233249-13233268 | MS.gene04829:intron | 30.0% |
| !!! | TTTTTTGTTGTTAGGGTTTG+TGG | + | chr7.4:13232154-13232173 | None:intergenic | 30.0% |
| AAATGCATCATAACAGGCTT+GGG | + | chr7.4:13232377-13232396 | None:intergenic | 35.0% | |
| AACTTCCCATAGAAAAAGCA+TGG | - | chr7.4:13232260-13232279 | MS.gene04829:CDS | 35.0% | |
| ATAAAAGGGAATCAGTTGTC+CGG | - | chr7.4:13234003-13234022 | MS.gene04829:CDS | 35.0% | |
| ATGCATAATATATGAAGGGG+CGG | - | chr7.4:13234473-13234492 | MS.gene04829:intron | 35.0% | |
| ATGGGAAAAATTCAAGGTGT+GGG | + | chr7.4:13232441-13232460 | None:intergenic | 35.0% | |
| ATTAGTTCGGATCGCATTAT+TGG | + | chr7.4:13232337-13232356 | None:intergenic | 35.0% | |
| ATTGAATCCGAAGAAGAAAG+TGG | + | chr7.4:13232101-13232120 | None:intergenic | 35.0% | |
| ATTGGAGGCAAGATTTGAAT+AGG | - | chr7.4:13235012-13235031 | MS.gene04829:CDS | 35.0% | |
| CAAGGAATATCTTGGTAAAG+AGG | + | chr7.4:13232966-13232985 | None:intergenic | 35.0% | |
| CAGAAACAGGGTTAAATGTT+AGG | - | chr7.4:13233198-13233217 | MS.gene04829:intron | 35.0% | |
| CGATCTTTCAACAACTCATT+GGG | + | chr7.4:13233805-13233824 | None:intergenic | 35.0% | |
| CGTTTGATATAGCAGAAACA+GGG | - | chr7.4:13233186-13233205 | MS.gene04829:intron | 35.0% | |
| CTAACGATGGGAAAAATTCA+AGG | + | chr7.4:13232447-13232466 | None:intergenic | 35.0% | |
| CTGAGGATATTGATATTCCA+TGG | - | chr7.4:13233414-13233433 | MS.gene04829:intron | 35.0% | |
| GAGATTGGAGAAACATTTAG+GGG | - | chr7.4:13233295-13233314 | MS.gene04829:intron | 35.0% | |
| GATATGAAGCAACCACTAAT+AGG | - | chr7.4:13234928-13234947 | MS.gene04829:CDS | 35.0% | |
| GCAAACTTTAATAACCACTC+AGG | + | chr7.4:13233395-13233414 | None:intergenic | 35.0% | |
| GGAGATTGGAGAAACATTTA+GGG | - | chr7.4:13233294-13233313 | MS.gene04829:intron | 35.0% | |
| GGGTTAAATGTTAGGGAAAA+TGG | - | chr7.4:13233206-13233225 | MS.gene04829:intron | 35.0% | |
| TCATTGGGCTTACTATTCAA+GGG | + | chr7.4:13233790-13233809 | None:intergenic | 35.0% | |
| TCGATCTTTCAACAACTCAT+TGG | + | chr7.4:13233806-13233825 | None:intergenic | 35.0% | |
| TCGTTATTTATGGTGTCTAG+TGG | - | chr7.4:13234060-13234079 | MS.gene04829:CDS | 35.0% | |
| TGCACATGCAAATACGTAAT+TGG | + | chr7.4:13233590-13233609 | None:intergenic | 35.0% | |
| TGTTCGCTCCAATATTTATC+TGG | + | chr7.4:13232559-13232578 | None:intergenic | 35.0% | |
| TTACCAAGATATTCCTTGTC+CGG | - | chr7.4:13232968-13232987 | MS.gene04829:intron | 35.0% | |
| TTAGTTCGGATCGCATTATT+GGG | + | chr7.4:13232336-13232355 | None:intergenic | 35.0% | |
| TTCAAATCTTGCCTCCAATT+TGG | + | chr7.4:13235011-13235030 | None:intergenic | 35.0% | |
| TTGTGATTGGAGTTGTGTAA+TGG | + | chr7.4:13232212-13232231 | None:intergenic | 35.0% | |
| ! | AAGAAAGTGGATTCGGATTT+GGG | + | chr7.4:13232088-13232107 | None:intergenic | 35.0% |
| ! | AGAGCTGAAAGCACATAAAA+GGG | - | chr7.4:13233989-13234008 | MS.gene04829:CDS | 35.0% |
| ! | TAGAGCTGAAAGCACATAAA+AGG | - | chr7.4:13233988-13234007 | MS.gene04829:CDS | 35.0% |
| ! | TGTTGCTTCATCGTTTGAAA+CGG | + | chr7.4:13232605-13232624 | None:intergenic | 35.0% |
| !! | ACATAGTTTAGGAAGTGCTA+TGG | - | chr7.4:13233151-13233170 | MS.gene04829:intron | 35.0% |
| !! | GGTTTGTTGTTTGGAATTTG+AGG | + | chr7.4:13232132-13232151 | None:intergenic | 35.0% |
| !! | GTATAACTTTGATGATGAGC+AGG | - | chr7.4:13234886-13234905 | MS.gene04829:CDS | 35.0% |
| !! | GTGGTTATTAAAGTTTGCTG+AGG | - | chr7.4:13233397-13233416 | MS.gene04829:intron | 35.0% |
| !! | GTTGTGTAATGGTGTTGATT+TGG | + | chr7.4:13232201-13232220 | None:intergenic | 35.0% |
| !! | TAACATTTGCTGTGGCATAT+AGG | + | chr7.4:13232504-13232523 | None:intergenic | 35.0% |
| !! | TTGTTGTTTGGAATTTGAGG+TGG | + | chr7.4:13232129-13232148 | None:intergenic | 35.0% |
| !!! | TGCTTTTTCTATGGGAAGTT+CGG | + | chr7.4:13232260-13232279 | None:intergenic | 35.0% |
| !!! | TTTCGCCATGCTTTTTCTAT+GGG | + | chr7.4:13232268-13232287 | None:intergenic | 35.0% |
| !!! | TTTTCGCCATGCTTTTTCTA+TGG | + | chr7.4:13232269-13232288 | None:intergenic | 35.0% |
| AAAGCATGGCGAAAAATCCA+CGG | - | chr7.4:13232274-13232293 | MS.gene04829:CDS | 40.0% | |
| AAATCCACGGTGAAGATGAT+TGG | - | chr7.4:13232287-13232306 | MS.gene04829:intron | 40.0% | |
| AAATCTTGCCTCCAATTTGG+TGG | + | chr7.4:13235008-13235027 | None:intergenic | 40.0% | |
| AACCGTTACTCATGTCGAAT+GGG | - | chr7.4:13232914-13232933 | MS.gene04829:intron | 40.0% | |
| AATATGGTGAAGACCGAAGA+TGG | - | chr7.4:13235035-13235054 | MS.gene04829:CDS | 40.0% | |
| AATCCACGGTGAAGATGATT+GGG | - | chr7.4:13232288-13232307 | MS.gene04829:intron | 40.0% | |
| AATTTCATGTTCCCAACCCT+AGG | + | chr7.4:13233269-13233288 | None:intergenic | 40.0% | |
| ACGTTAACGGGACATAGTTT+AGG | - | chr7.4:13233140-13233159 | MS.gene04829:intron | 40.0% | |
| ACTAACAGACAACGATGATC+AGG | - | chr7.4:13234133-13234152 | MS.gene04829:CDS | 40.0% | |
| AGTCCTATCTTGGAGAGATA+AGG | + | chr7.4:13235119-13235138 | None:intergenic | 40.0% | |
| ATAAGAAACCCTGGTGACTT+TGG | + | chr7.4:13233359-13233378 | None:intergenic | 40.0% | |
| ATAATATATGAAGGGGCGGT+GGG | - | chr7.4:13234477-13234496 | MS.gene04829:intron | 40.0% | |
| ATGTGTGGAAGATCTAACGA+TGG | + | chr7.4:13232460-13232479 | None:intergenic | 40.0% | |
| CAAAGCAATGTCCCTATTAG+TGG | + | chr7.4:13234943-13234962 | None:intergenic | 40.0% | |
| CAAATGCATCATAACAGGCT+TGG | + | chr7.4:13232378-13232397 | None:intergenic | 40.0% | |
| CACTAATAGGGACATTGCTT+TGG | - | chr7.4:13234941-13234960 | MS.gene04829:CDS | 40.0% | |
| CATTGGGCTTACTATTCAAG+GGG | + | chr7.4:13233789-13233808 | None:intergenic | 40.0% | |
| CCAACATGAGTATAACACCA+TGG | + | chr7.4:13233434-13233453 | None:intergenic | 40.0% | |
| CGTTAGATCTTCCACACATA+GGG | - | chr7.4:13232461-13232480 | MS.gene04829:intron | 40.0% | |
| CTCATTGGGCTTACTATTCA+AGG | + | chr7.4:13233791-13233810 | None:intergenic | 40.0% | |
| CTCGATGGCCAGATAAATAT+TGG | - | chr7.4:13232548-13232567 | MS.gene04829:intron | 40.0% | |
| GATGAGTATCTGCAAGTTGT+GGG | + | chr7.4:13235082-13235101 | None:intergenic | 40.0% | |
| GATGGGAAAAATTCAAGGTG+TGG | + | chr7.4:13232442-13232461 | None:intergenic | 40.0% | |
| GCGTTTGATATAGCAGAAAC+AGG | - | chr7.4:13233185-13233204 | MS.gene04829:intron | 40.0% | |
| GGACATTGCTTTGGTGAATA+AGG | - | chr7.4:13234950-13234969 | MS.gene04829:CDS | 40.0% | |
| GGGAGATTGGAGAAACATTT+AGG | - | chr7.4:13233293-13233312 | MS.gene04829:intron | 40.0% | |
| TACCCATTCGACATGAGTAA+CGG | + | chr7.4:13232919-13232938 | None:intergenic | 40.0% | |
| TAGTGGTTGCTTCATATCCA+CGG | + | chr7.4:13234926-13234945 | None:intergenic | 40.0% | |
| TCCGAATCCACTTTCTTCTT+CGG | - | chr7.4:13232091-13232110 | MS.gene04829:CDS | 40.0% | |
| TCGTTAGATCTTCCACACAT+AGG | - | chr7.4:13232460-13232479 | MS.gene04829:intron | 40.0% | |
| TGAACTTAGCTCAGTTGTCA+GGG | - | chr7.4:13234446-13234465 | MS.gene04829:intron | 40.0% | |
| TGAAGAGATGAGTCCTATCT+TGG | + | chr7.4:13235129-13235148 | None:intergenic | 40.0% | |
| TGATGAGTATCTGCAAGTTG+TGG | + | chr7.4:13235083-13235102 | None:intergenic | 40.0% | |
| TGTGTGGAAGATCTAACGAT+GGG | + | chr7.4:13232459-13232478 | None:intergenic | 40.0% | |
| TGTTGGAGTTGAGTTAGAGT+TGG | - | chr7.4:13233448-13233467 | MS.gene04829:intron | 40.0% | |
| TTAATGAGAAATCGCCTGAG+TGG | - | chr7.4:13233378-13233397 | MS.gene04829:intron | 40.0% | |
| ! | CCCTAAAACTTGTTCTCTTG+CGG | + | chr7.4:13233072-13233091 | None:intergenic | 40.0% |
| ! | CCGCAAGAGAACAAGTTTTA+GGG | - | chr7.4:13233069-13233088 | MS.gene04829:intron | 40.0% |
| ! | GAAGAAAGTGGATTCGGATT+TGG | + | chr7.4:13232089-13232108 | None:intergenic | 40.0% |
| ! | GCAGAGACATTGTTATTGCT+TGG | - | chr7.4:13232886-13232905 | MS.gene04829:intron | 40.0% |
| ! | TCCGAAGAAGAAAGTGGATT+CGG | + | chr7.4:13232095-13232114 | None:intergenic | 40.0% |
| ! | TCCGCAAGAGAACAAGTTTT+AGG | - | chr7.4:13233068-13233087 | MS.gene04829:intron | 40.0% |
| ! | TGTTTGGAATTTGAGGTGGT+TGG | + | chr7.4:13232125-13232144 | None:intergenic | 40.0% |
| !! | AATGGTGTTGATTTGGGATG+CGG | + | chr7.4:13232194-13232213 | None:intergenic | 40.0% |
| !! | CCATGGTGTTATACTCATGT+TGG | - | chr7.4:13233431-13233450 | MS.gene04829:intron | 40.0% |
| !! | CGCAAGAGAACAAGTTTTAG+GGG | - | chr7.4:13233070-13233089 | MS.gene04829:intron | 40.0% |
| !! | CTTTTGATTCATAGGTCGTG+GGG | + | chr7.4:13234801-13234820 | None:intergenic | 40.0% |
| !! | GCTTTTGATTCATAGGTCGT+GGG | + | chr7.4:13234802-13234821 | None:intergenic | 40.0% |
| !! | TGCTTTTGATTCATAGGTCG+TGG | + | chr7.4:13234803-13234822 | None:intergenic | 40.0% |
| !! | TTCTCCGTAACGGATTAGTT+CGG | + | chr7.4:13232350-13232369 | None:intergenic | 40.0% |
| !!! | AAGTTTTAGGGGAAGTGAGA+AGG | - | chr7.4:13233081-13233100 | MS.gene04829:intron | 40.0% |
| ACAACTGAGCTAAGTTCACG+AGG | + | chr7.4:13234444-13234463 | None:intergenic | 45.0% | |
| ACCGACAGGCTCAAAAAAGA+CGG | - | chr7.4:13233032-13233051 | MS.gene04829:intron | 45.0% | |
| ATATGGAGAAGTGGTGTGTC+TGG | + | chr7.4:13234511-13234530 | None:intergenic | 45.0% | |
| ATTCCGACCTATCCACTTCA+CGG | - | chr7.4:13234202-13234221 | MS.gene04829:CDS | 45.0% | |
| CATAATATATGAAGGGGCGG+TGG | - | chr7.4:13234476-13234495 | MS.gene04829:intron | 45.0% | |
| CGATCCGAACTAATCCGTTA+CGG | - | chr7.4:13232343-13232362 | MS.gene04829:intron | 45.0% | |
| GAACCGTTACTCATGTCGAA+TGG | - | chr7.4:13232913-13232932 | MS.gene04829:intron | 45.0% | |
| GATCGCATTATTGGGTCCAT+TGG | + | chr7.4:13232328-13232347 | None:intergenic | 45.0% | |
| GGTTGGACTTCTAGATCCAA+TGG | - | chr7.4:13232309-13232328 | MS.gene04829:intron | 45.0% | |
| GTGAACTTAGCTCAGTTGTC+AGG | - | chr7.4:13234445-13234464 | MS.gene04829:intron | 45.0% | |
| GTTACGTCATACCCTATGTG+TGG | + | chr7.4:13232475-13232494 | None:intergenic | 45.0% | |
| TATGGAGAAGTGGTGTGTCT+GGG | + | chr7.4:13234510-13234529 | None:intergenic | 45.0% | |
| TGCATGTGCTCATAACTTGG+AGG | - | chr7.4:13233511-13233530 | MS.gene04829:intron | 45.0% | |
| TGCTGCATGTGCTCATAACT+TGG | - | chr7.4:13233508-13233527 | MS.gene04829:intron | 45.0% | |
| TGTCCGGACAAGGAATATCT+TGG | + | chr7.4:13232974-13232993 | None:intergenic | 45.0% | |
| TTAAGACAGTGACCGTGAAG+TGG | + | chr7.4:13234217-13234236 | None:intergenic | 45.0% | |
| TTCTCGATATGTACACCGAC+AGG | - | chr7.4:13233018-13233037 | MS.gene04829:intron | 45.0% | |
| ! | AGTGGATTCGGATTTGGGAA+AGG | + | chr7.4:13232083-13232102 | None:intergenic | 45.0% |
| ! | ATATGGTGCCAAAGTCACCA+GGG | - | chr7.4:13233348-13233367 | MS.gene04829:intron | 45.0% |
| ! | CATTTTCTGGACCTAGGGTT+GGG | - | chr7.4:13233255-13233274 | MS.gene04829:intron | 45.0% |
| ! | CTTGGGACTTTTCTCCGTAA+CGG | + | chr7.4:13232360-13232379 | None:intergenic | 45.0% |
| ! | GACATTGTTATTGCTTGGCG+AGG | - | chr7.4:13232891-13232910 | MS.gene04829:intron | 45.0% |
| ! | GAGCCTTATCTCTCCAAGAT+AGG | - | chr7.4:13235113-13235132 | MS.gene04829:CDS | 45.0% |
| ! | TCATTTTCTGGACCTAGGGT+TGG | - | chr7.4:13233254-13233273 | MS.gene04829:intron | 45.0% |
| ! | TGATGATGAGCAGGTACCAT+GGG | - | chr7.4:13234895-13234914 | MS.gene04829:CDS | 45.0% |
| ! | TGGGACGTTAACATTTGCTG+TGG | + | chr7.4:13232512-13232531 | None:intergenic | 45.0% |
| ! | TTGGGATGCGGAACATTTTG+TGG | + | chr7.4:13232182-13232201 | None:intergenic | 45.0% |
| !! | GGGTTTGTGGGTTTGTTGTT+TGG | + | chr7.4:13232141-13232160 | None:intergenic | 45.0% |
| !! | TTGATGATGAGCAGGTACCA+TGG | - | chr7.4:13234894-13234913 | MS.gene04829:CDS | 45.0% |
| !!! | ACCGTCTTTTTTGAGCCTGT+CGG | + | chr7.4:13233036-13233055 | None:intergenic | 45.0% |
| !! | AAAAAAATTGTATTAAAATT+TGG | + | chr7.4:13233834-13233853 | None:intergenic | 5.0% |
| !! | AAACTAAAAAATTTAAATAT+GGG | - | chr7.4:13233871-13233890 | MS.gene04829:CDS | 5.0% |
| !! | AAATATATATAAGAAATAAT+TGG | - | chr7.4:13232696-13232715 | MS.gene04829:intron | 5.0% |
| !!! | TTTTTAAATATTTCTAAAAA+TGG | + | chr7.4:13233657-13233676 | None:intergenic | 5.0% |
| AACGACGTTCGAGTAGAAGC+AGG | - | chr7.4:13232993-13233012 | MS.gene04829:intron | 50.0% | |
| AAGTGGATAGGTCGGAATGG+AGG | + | chr7.4:13234200-13234219 | None:intergenic | 50.0% | |
| ACAGTGACCGTGAAGTGGAT+AGG | + | chr7.4:13234212-13234231 | None:intergenic | 50.0% | |
| ACCCATCGAGTATGTGCAAG+TGG | + | chr7.4:13233538-13233557 | None:intergenic | 50.0% | |
| ACTCTGTGCCACCAAATTGG+AGG | - | chr7.4:13234997-13235016 | MS.gene04829:CDS | 50.0% | |
| AGCACTCTGTGCCACCAAAT+TGG | - | chr7.4:13234994-13235013 | MS.gene04829:CDS | 50.0% | |
| AGCGAACACGCGAATTGGAT+GGG | - | chr7.4:13232571-13232590 | MS.gene04829:intron | 50.0% | |
| ATGGAGAAGTGGTGTGTCTG+GGG | + | chr7.4:13234509-13234528 | None:intergenic | 50.0% | |
| ATGTGTGAGCTCCAGTCACT+AGG | - | chr7.4:13234536-13234555 | MS.gene04829:intron | 50.0% | |
| ATTGGAGCGAACACGCGAAT+TGG | - | chr7.4:13232566-13232585 | MS.gene04829:intron | 50.0% | |
| CAACCCAATCATCTTCACCG+TGG | + | chr7.4:13232294-13232313 | None:intergenic | 50.0% | |
| CACGGTGAAGATGATTGGGT+TGG | - | chr7.4:13232292-13232311 | MS.gene04829:intron | 50.0% | |
| CCCACTTGCACATACTCGAT+GGG | - | chr7.4:13233534-13233553 | MS.gene04829:intron | 50.0% | |
| CCCATCGAGTATGTGCAAGT+GGG | + | chr7.4:13233537-13233556 | None:intergenic | 50.0% | |
| GAAGACCGAAGATGGACGTT+GGG | - | chr7.4:13235043-13235062 | MS.gene04829:CDS | 50.0% | |
| GCACATGCAGCATCAGCATT+AGG | + | chr7.4:13233500-13233519 | None:intergenic | 50.0% | |
| GTGAAGTGGATAGGTCGGAA+TGG | + | chr7.4:13234203-13234222 | None:intergenic | 50.0% | |
| TCGGAATGGAGGTCTCTTTG+TGG | + | chr7.4:13234189-13234208 | None:intergenic | 50.0% | |
| TCTACTCGAACGTCGTTGTC+CGG | + | chr7.4:13232990-13233009 | None:intergenic | 50.0% | |
| TGAAGACCGAAGATGGACGT+TGG | - | chr7.4:13235042-13235061 | MS.gene04829:CDS | 50.0% | |
| TGACCGTGAAGTGGATAGGT+CGG | + | chr7.4:13234208-13234227 | None:intergenic | 50.0% | |
| TGGTCAAGTAGCCTAGTGAC+TGG | + | chr7.4:13234550-13234569 | None:intergenic | 50.0% | |
| ! | GATATGGTGCCAAAGTCACC+AGG | - | chr7.4:13233347-13233366 | MS.gene04829:intron | 50.0% |
| CAGCACCCAACGTCCATCTT+CGG | + | chr7.4:13235051-13235070 | None:intergenic | 55.0% | |
| CATATCCACGGTTGCTCCCA+TGG | + | chr7.4:13234914-13234933 | None:intergenic | 55.0% | |
| GAGCGAACACGCGAATTGGA+TGG | - | chr7.4:13232570-13232589 | MS.gene04829:intron | 55.0% | |
| GCCCACTTGCACATACTCGA+TGG | - | chr7.4:13233533-13233552 | MS.gene04829:intron | 55.0% | |
| AGGTACCATGGGAGCAACCG+TGG | - | chr7.4:13234906-13234925 | MS.gene04829:CDS | 60.0% | |
| CGAACGTCGTTGTCCGGACA+AGG | + | chr7.4:13232984-13233003 | None:intergenic | 60.0% | |
| CGAAGATGGACGTTGGGTGC+TGG | - | chr7.4:13235049-13235068 | MS.gene04829:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 13232049 | 13235160 | 13232049 | ID=MS.gene04829 |
| chr7.4 | mRNA | 13232049 | 13235160 | 13232049 | ID=MS.gene04829.t1;Parent=MS.gene04829 |
| chr7.4 | exon | 13234575 | 13235160 | 13234575 | ID=MS.gene04829.t1.exon1;Parent=MS.gene04829.t1 |
| chr7.4 | CDS | 13234575 | 13235160 | 13234575 | ID=cds.MS.gene04829.t1;Parent=MS.gene04829.t1 |
| chr7.4 | exon | 13233654 | 13234326 | 13233654 | ID=MS.gene04829.t1.exon2;Parent=MS.gene04829.t1 |
| chr7.4 | CDS | 13233654 | 13234326 | 13233654 | ID=cds.MS.gene04829.t1;Parent=MS.gene04829.t1 |
| chr7.4 | exon | 13232049 | 13232301 | 13232049 | ID=MS.gene04829.t1.exon3;Parent=MS.gene04829.t1 |
| chr7.4 | CDS | 13232049 | 13232301 | 13232049 | ID=cds.MS.gene04829.t1;Parent=MS.gene04829.t1 |
| Gene Sequence |
| Protein sequence |
