AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene048432

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene048432.t1 MTR_8g066975 97.980 297 6 0 1 297 1 297 0.0 583
MS.gene048432.t1 MTR_5g030530 85.185 297 44 0 1 297 1 297 0.0 521
MS.gene048432.t1 MTR_4g012850 35.986 289 167 6 6 291 14 287 2.88e-46 158
MS.gene048432.t1 MTR_4g088545 34.516 310 181 9 1 297 1 301 8.18e-44 152
MS.gene048432.t1 MTR_2g102010 34.667 300 177 6 1 296 10 294 1.60e-43 150
MS.gene048432.t1 MTR_2g436930 29.467 319 184 9 9 296 16 324 9.89e-35 128
MS.gene048432.t1 MTR_5g009500 31.761 318 181 7 4 297 34 339 2.37e-33 125
MS.gene048432.t1 MTR_5g009500 28.922 204 129 4 100 296 30 224 6.53e-14 71.6
MS.gene048432.t1 MTR_4g088545 34.241 257 150 7 1 245 1 250 3.54e-33 123
MS.gene048432.t1 MTR_4g088545 27.979 193 127 4 106 293 10 195 1.27e-14 72.8
MS.gene048432.t1 MTR_8g027975 31.056 322 184 8 2 297 45 354 2.55e-31 120
MS.gene048432.t1 MTR_4g119770 27.554 323 191 8 7 296 13 325 4.38e-31 119
MS.gene048432.t1 MTR_7g109135 31.769 277 177 6 24 296 38 306 4.11e-29 113
MS.gene048432.t1 MTR_7g109135 32.143 168 107 2 111 276 25 187 6.95e-17 79.7
MS.gene048432.t1 MTR_4g088545 33.636 220 133 6 1 214 1 213 3.44e-28 108
MS.gene048432.t1 MTR_4g088545 27.979 193 127 4 106 293 10 195 5.03e-15 73.6
MS.gene048432.t1 MTR_3g025800 29.688 320 188 12 4 297 24 332 9.57e-28 110
MS.gene048432.t1 MTR_3g025800 28.182 220 120 6 101 295 21 227 7.18e-14 71.6
MS.gene048432.t1 MTR_5g055410 31.206 282 172 9 24 296 37 305 2.47e-27 109
MS.gene048432.t1 MTR_5g055410 26.882 186 109 7 23 197 134 303 6.86e-12 65.5
MS.gene048432.t1 MTR_1g087840 30.325 277 181 6 24 296 35 303 5.18e-27 107
MS.gene048432.t1 MTR_7g109135 31.780 236 149 6 65 296 1 228 1.82e-24 99.4
MS.gene048432.t1 MTR_7g109135 29.964 277 175 6 24 296 38 299 5.26e-24 99.4
MS.gene048432.t1 MTR_7g109135 30.357 168 103 3 111 276 25 180 2.56e-13 69.3
MS.gene048432.t1 MTR_1g090330 26.715 277 192 6 24 297 30 298 1.02e-23 98.6
MS.gene048432.t1 MTR_1g090330 27.128 188 130 3 11 197 114 295 1.09e-15 76.3
MS.gene048432.t1 MTR_3g104600 28.431 306 197 7 6 297 33 330 4.69e-23 97.4
MS.gene048432.t1 MTR_6g034515 29.893 281 169 6 23 296 82 341 5.01e-23 97.8
MS.gene048432.t1 MTR_8g098240 29.210 291 179 8 10 297 322 588 2.63e-21 94.4
MS.gene048432.t1 MTR_7g109135 32.547 212 131 6 89 296 4 207 3.46e-21 90.1
MS.gene048432.t1 MTR_2g436930 27.984 243 143 7 76 296 2 234 6.72e-21 89.7
MS.gene048432.t1 MTR_2g436930 26.263 198 123 6 10 193 40 228 6.22e-13 67.4
MS.gene048432.t1 MTR_8g076760 26.897 290 171 11 23 290 29 299 6.75e-21 90.9
MS.gene048432.t1 MTR_8g076760 29.648 199 119 7 8 195 113 301 1.51e-15 75.9
MS.gene048432.t1 MTR_8g076760 30.286 175 112 5 124 296 30 196 6.58e-12 65.5
MS.gene048432.t1 MTR_4g114320 24.232 293 201 4 6 296 121 394 9.98e-21 91.7
MS.gene048432.t1 MTR_5g073040 30.667 300 169 12 8 294 39 312 1.00e-20 90.9
MS.gene048432.t1 MTR_5g073040 26.961 204 128 9 96 297 29 213 5.16e-11 62.8
MS.gene048432.t1 MTR_6g091800 25.000 300 208 6 5 296 16 306 1.73e-20 89.7
MS.gene048432.t1 MTR_7g084400 27.458 295 186 7 8 296 213 485 2.40e-20 91.3
MS.gene048432.t1 MTR_4g018750 29.808 208 130 4 1 206 110 303 2.96e-20 89.0
MS.gene048432.t1 MTR_4g018750 28.571 280 174 10 24 293 31 294 4.49e-19 85.9
MS.gene048432.t1 MTR_4g018750 27.363 201 140 3 100 296 7 205 6.00e-16 77.0
MS.gene048432.t1 MTR_1g012030 25.170 294 197 6 6 296 137 410 6.96e-20 89.4
MS.gene048432.t1 MTR_4g057850 28.223 287 179 10 10 286 24 293 9.54e-20 87.8
MS.gene048432.t1 MTR_4g057850 30.556 180 114 4 19 195 128 299 5.66e-15 74.3
MS.gene048432.t1 MTR_3g107510 24.830 294 198 6 6 296 120 393 1.31e-19 88.6
MS.gene048432.t1 MTR_4g119770 26.459 257 156 6 7 240 13 259 2.14e-19 85.9
MS.gene048432.t1 MTR_4g119770 29.688 192 119 6 111 290 17 204 7.14e-13 67.8
MS.gene048432.t1 MTR_3g098460 28.094 299 188 8 5 296 202 480 2.52e-19 88.2
MS.gene048432.t1 MTR_3g104500 25.828 302 204 11 2 293 28 319 3.24e-19 86.7
MS.gene048432.t1 MTR_3g462140 29.496 278 175 7 24 293 31 295 3.40e-19 86.3
MS.gene048432.t1 MTR_3g462140 30.601 183 114 2 19 201 131 300 1.26e-18 84.3
MS.gene048432.t1 MTR_3g462140 30.198 202 132 5 101 296 8 206 3.48e-17 80.5
MS.gene048432.t1 MTR_7g066690 28.975 283 169 11 24 293 33 296 5.29e-19 85.5
MS.gene048432.t1 MTR_7g066690 27.835 194 127 2 4 197 117 297 3.79e-18 83.2
MS.gene048432.t1 MTR_7g066690 26.943 193 135 3 108 296 17 207 4.14e-15 74.7
MS.gene048432.t1 MTR_8g096050 26.712 292 191 6 10 296 229 502 1.87e-17 82.8
MS.gene048432.t1 MTR_8g096050 28.283 198 120 7 8 199 321 502 1.57e-13 70.9
MS.gene048432.t1 MTR_5g081910 25.566 309 195 8 20 297 20 324 4.60e-17 80.5
MS.gene048432.t1 MTR_6g091800 23.148 324 208 6 5 296 16 330 6.69e-17 80.1
MS.gene048432.t1 MTR_4g018750 27.363 201 140 3 100 296 7 205 6.44e-16 76.6
MS.gene048432.t1 MTR_4g018750 30.769 143 97 1 1 141 110 252 2.03e-14 72.4
MS.gene048432.t1 MTR_4g018750 27.869 244 150 10 24 257 31 258 8.55e-13 67.8
MS.gene048432.t1 MTR_6g091800 25.726 241 165 5 5 240 16 247 8.97e-16 75.9
MS.gene048432.t1 MTR_6g091800 25.726 241 165 5 5 240 16 247 1.18e-15 75.9
MS.gene048432.t1 MTR_8g092080 29.181 281 148 10 3 273 43 282 3.74e-15 75.1
MS.gene048432.t1 MTR_8g092080 31.013 158 97 4 142 293 56 207 1.47e-12 67.4
MS.gene048432.t1 MTR_1g097890 26.966 267 154 8 10 273 53 281 6.35e-15 74.3
MS.gene048432.t1 MTR_1g097890 32.432 185 95 4 109 293 52 206 8.07e-15 73.9
MS.gene048432.t1 MTR_1g097890 32.124 193 112 5 8 200 132 305 1.64e-13 70.1
MS.gene048432.t1 MTR_6g034145 24.111 253 180 5 52 296 4 252 6.98e-15 73.2
MS.gene048432.t1 MTR_7g068340 25.090 279 180 8 24 297 103 357 1.08e-14 73.9
MS.gene048432.t1 MTR_1g088995 27.090 299 194 8 4 297 29 308 6.49e-14 71.2
MS.gene048432.t1 MTR_6g091800 22.742 299 190 6 5 271 16 305 7.17e-14 71.2
MS.gene048432.t1 MTR_7g015870 27.586 290 173 13 23 293 40 311 8.15e-14 70.9
MS.gene048432.t1 MTR_7g015870 29.412 204 128 6 92 289 9 202 1.54e-12 67.4
MS.gene048432.t1 MTR_5g081150 25.000 308 205 6 1 296 28 321 9.84e-14 70.9
MS.gene048432.t1 MTR_5g081150 31.188 202 124 5 3 200 132 322 1.81e-11 64.3
MS.gene048432.t1 MTR_5g081910 27.830 212 129 5 108 297 41 250 1.17e-13 69.7
MS.gene048432.t1 MTR_7g015870 27.875 287 170 13 23 290 36 304 2.12e-13 70.1
MS.gene048432.t1 MTR_7g015870 29.787 188 116 6 108 289 21 198 1.41e-11 64.7
MS.gene048432.t1 MTR_7g064980 27.835 194 129 4 3 196 129 311 2.96e-13 69.3
MS.gene048432.t1 MTR_7g064980 24.919 309 206 9 1 296 19 314 3.32e-12 66.2
MS.gene048432.t1 MTR_3g100570 27.805 205 121 6 4 197 120 308 7.40e-13 68.2
MS.gene048432.t1 MTR_6g092210 23.695 249 180 5 52 296 4 246 8.09e-13 67.4
MS.gene048432.t1 MTR_6g015860 25.087 287 184 9 23 293 32 303 1.00e-12 67.8
MS.gene048432.t1 MTR_6g015860 27.368 190 122 5 106 289 15 194 3.61e-11 63.2
MS.gene048432.t1 MTR_6g091800 23.396 265 165 5 5 240 16 271 2.45e-12 66.6
MS.gene048432.t1 MTR_6g091800 23.396 265 165 5 5 240 16 271 3.86e-12 65.9
MS.gene048432.t1 MTR_3g028590 25.965 285 186 9 7 279 92 363 4.79e-12 66.2
MS.gene048432.t1 MTR_2g032610 24.662 296 195 9 11 291 32 314 5.15e-12 65.9
MS.gene048432.t1 MTR_3g028590 25.965 285 186 9 7 279 96 367 5.17e-12 66.2
MS.gene048432.t1 MTR_5g032420 27.673 318 188 11 14 296 9 319 8.35e-12 65.1
MS.gene048432.t1 MTR_8g068890 26.282 312 193 9 14 296 9 312 9.58e-12 65.1
MS.gene048432.t1 MTR_3g074490 23.734 316 200 10 1 296 109 403 1.71e-11 64.7
MS.gene048432.t1 MTR_8g036880 25.172 290 193 9 2 279 96 373 1.95e-11 64.3
MS.gene048432.t1 MTR_3g090820 27.636 275 174 10 43 297 119 388 2.89e-11 63.9
MS.gene048432.t1 MTR_4g005330 24.581 179 122 2 119 296 121 287 6.96e-11 62.4
MS.gene048432.t1 MTR_8g090210 24.719 267 168 7 50 296 144 397 7.52e-11 62.8
MS.gene048432.t1 MTR_4g005330 22.186 311 201 8 6 296 64 353 9.34e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene048432.t1 AT5G46800 79.333 300 59 1 1 297 1 300 8.07e-175 485
MS.gene048432.t1 AT5G46800 79.333 300 59 1 1 297 1 300 8.07e-175 485
MS.gene048432.t1 AT5G46800 79.333 300 59 1 1 297 1 300 8.07e-175 485
MS.gene048432.t1 AT2G33820 34.314 306 173 8 6 297 16 307 1.46e-49 167
MS.gene048432.t1 AT2G33820 33.439 314 173 9 6 297 16 315 1.06e-46 159
MS.gene048432.t1 AT1G79900 34.164 281 152 7 22 296 30 283 8.83e-42 146
MS.gene048432.t1 AT2G33820 32.283 254 143 8 6 243 16 256 1.14e-33 124
MS.gene048432.t1 AT2G33820 36.458 192 105 5 115 297 43 226 6.54e-33 121
MS.gene048432.t1 AT5G48970 28.615 325 186 9 7 296 21 334 1.86e-31 120
MS.gene048432.t1 AT4G01100 30.218 321 186 8 3 297 37 345 6.11e-31 119
MS.gene048432.t1 AT4G01100 30.667 300 170 8 24 297 8 295 1.10e-29 114
MS.gene048432.t1 AT4G01100 29.254 335 185 8 3 297 37 359 7.13e-29 114
MS.gene048432.t1 AT1G25380 32.117 274 171 8 24 291 37 301 4.68e-28 111
MS.gene048432.t1 AT1G25380 32.117 274 171 8 24 291 37 301 4.68e-28 111
MS.gene048432.t1 AT3G21390 27.044 318 189 7 7 291 18 325 2.52e-26 106
MS.gene048432.t1 AT3G21390 25.366 205 132 4 10 199 132 330 8.79e-12 65.1
MS.gene048432.t1 AT3G21390 27.044 318 189 7 7 291 40 347 3.67e-26 106
MS.gene048432.t1 AT3G21390 25.366 205 132 4 10 199 154 352 1.14e-11 65.1
MS.gene048432.t1 AT2G47490 30.325 277 180 7 24 296 33 300 3.83e-25 102
MS.gene048432.t1 AT2G47490 32.597 181 109 8 121 297 30 201 2.25e-11 63.9
MS.gene048432.t1 AT5G48970 28.782 271 156 8 52 296 4 263 6.55e-25 101
MS.gene048432.t1 AT5G48970 26.500 200 127 4 8 193 64 257 1.80e-15 75.1
MS.gene048432.t1 AT3G54110 30.605 281 167 10 24 293 31 294 4.18e-23 97.1
MS.gene048432.t1 AT3G54110 31.156 199 123 3 1 197 109 295 3.57e-21 91.7
MS.gene048432.t1 AT3G54110 30.198 202 132 4 100 296 7 204 1.33e-18 84.7
MS.gene048432.t1 AT1G14140 26.449 276 193 6 21 293 29 297 2.26e-21 92.4
MS.gene048432.t1 AT1G14140 28.125 192 126 5 6 196 117 297 2.90e-13 69.3
MS.gene048432.t1 AT2G37890 27.575 301 197 5 6 296 43 332 7.12e-21 91.3
MS.gene048432.t1 AT2G37890 27.041 196 132 4 2 197 146 330 7.84e-13 68.2
MS.gene048432.t1 AT5G66380 26.333 300 193 9 6 290 8 294 7.70e-21 90.9
MS.gene048432.t1 AT5G66380 30.000 200 121 7 5 195 107 296 7.50e-18 82.4
MS.gene048432.t1 AT4G11440 27.458 295 185 9 10 297 332 604 1.05e-20 92.4
MS.gene048432.t1 AT4G11440 27.458 295 185 9 10 297 332 604 1.05e-20 92.4
MS.gene048432.t1 AT5G01340 28.169 284 184 8 10 286 19 289 3.01e-20 89.4
MS.gene048432.t1 AT5G01340 30.000 180 116 4 19 195 123 295 9.27e-14 70.9
MS.gene048432.t1 AT5G58970 30.108 279 177 7 24 296 32 298 7.43e-20 88.2
MS.gene048432.t1 AT5G58970 28.856 201 128 3 1 199 111 298 3.99e-19 85.9
MS.gene048432.t1 AT5G58970 28.293 205 139 4 97 296 5 206 2.45e-17 80.9
MS.gene048432.t1 AT1G74240 28.797 316 187 11 4 294 32 334 3.44e-19 87.0
MS.gene048432.t1 AT5G42130 28.881 277 170 5 24 293 134 390 4.13e-19 87.0
MS.gene048432.t1 AT1G14560 25.952 289 187 8 24 296 43 320 1.03e-18 85.1
MS.gene048432.t1 AT1G74240 28.956 297 173 11 23 294 3 286 1.50e-18 84.7
MS.gene048432.t1 AT4G32400 26.190 294 194 7 6 296 112 385 1.95e-18 85.1
MS.gene048432.t1 AT3G55640 30.570 193 123 4 7 199 144 325 2.23e-18 84.3
MS.gene048432.t1 AT3G55640 24.834 302 198 7 3 290 33 319 5.92e-17 80.1
MS.gene048432.t1 AT3G55640 29.851 201 129 5 100 294 30 224 6.11e-15 74.3
MS.gene048432.t1 AT3G55640 30.570 193 123 4 7 199 144 325 2.23e-18 84.3
MS.gene048432.t1 AT3G55640 24.834 302 198 7 3 290 33 319 5.92e-17 80.1
MS.gene048432.t1 AT3G55640 29.851 201 129 5 100 294 30 224 6.11e-15 74.3
MS.gene048432.t1 AT5G51050 28.082 292 184 9 10 296 225 495 3.77e-18 84.7
MS.gene048432.t1 AT5G51050 26.341 205 124 6 1 199 312 495 3.31e-12 67.0
MS.gene048432.t1 AT2G30160 27.362 307 174 11 8 294 42 319 5.71e-18 83.2
MS.gene048432.t1 AT5G58970 28.431 204 138 4 98 296 6 206 1.54e-17 80.9
MS.gene048432.t1 AT1G07030 27.946 297 182 10 8 294 40 314 1.86e-17 81.6
MS.gene048432.t1 AT5G61810 27.609 297 184 8 5 296 62 332 6.97e-17 80.1
MS.gene048432.t1 AT5G61810 26.570 207 122 7 1 200 150 333 1.14e-12 67.8
MS.gene048432.t1 AT5G56450 24.038 312 200 11 6 297 32 326 7.20e-17 80.1
MS.gene048432.t1 AT3G53940 25.249 301 204 5 6 296 71 360 1.37e-16 79.7
MS.gene048432.t1 AT5G61810 27.609 297 184 8 5 296 205 475 3.34e-16 79.0
MS.gene048432.t1 AT5G61810 27.000 200 116 7 8 200 300 476 2.45e-12 67.4
MS.gene048432.t1 AT4G26180 25.987 304 201 10 5 296 18 309 3.66e-16 77.8
MS.gene048432.t1 AT1G14560 25.758 264 169 8 24 271 43 295 1.21e-15 76.3
MS.gene048432.t1 AT1G34065 34.211 190 106 5 8 197 156 326 1.35e-15 76.3
MS.gene048432.t1 AT1G34065 28.125 224 121 6 78 293 39 230 5.56e-13 68.9
MS.gene048432.t1 AT1G34065 27.778 270 143 11 14 273 78 305 7.13e-12 65.5
MS.gene048432.t1 AT1G34065 34.211 190 106 5 8 197 163 333 1.37e-15 76.6
MS.gene048432.t1 AT1G34065 28.889 225 118 7 78 293 46 237 5.21e-13 68.9
MS.gene048432.t1 AT1G34065 27.778 270 143 11 14 273 85 312 6.00e-12 65.9
MS.gene048432.t1 AT4G39460 29.181 281 148 10 3 273 49 288 1.86e-15 75.9
MS.gene048432.t1 AT4G39460 29.787 188 102 4 103 290 53 210 5.44e-13 68.6
MS.gene048432.t1 AT4G39460 30.052 193 116 4 8 200 139 312 2.22e-12 67.0
MS.gene048432.t1 AT4G39460 29.181 281 148 10 3 273 49 288 1.86e-15 75.9
MS.gene048432.t1 AT4G39460 29.787 188 102 4 103 290 53 210 5.44e-13 68.6
MS.gene048432.t1 AT4G39460 30.052 193 116 4 8 200 139 312 2.22e-12 67.0
MS.gene048432.t1 AT4G39460 29.181 281 148 10 3 273 49 288 1.86e-15 75.9
MS.gene048432.t1 AT4G39460 29.787 188 102 4 103 290 53 210 5.44e-13 68.6
MS.gene048432.t1 AT4G39460 30.052 193 116 4 8 200 139 312 2.22e-12 67.0
MS.gene048432.t1 AT3G55640 29.851 201 129 6 100 294 30 224 2.30e-15 74.7
MS.gene048432.t1 AT3G55640 29.851 201 129 6 100 294 30 224 2.30e-15 74.7
MS.gene048432.t1 AT5G01500 26.978 278 182 7 21 297 132 389 5.24e-15 75.1
MS.gene048432.t1 AT2G39970 25.658 304 185 11 20 290 20 315 1.06e-14 73.9
MS.gene048432.t1 AT3G20240 22.642 318 193 8 5 296 49 339 1.32e-14 73.6
MS.gene048432.t1 AT1G14560 27.723 202 129 4 108 296 25 222 3.73e-14 70.9
MS.gene048432.t1 AT4G26180 26.165 279 182 10 5 271 18 284 1.44e-13 70.1
MS.gene048432.t1 AT5G07320 24.101 278 182 8 24 297 225 477 5.26e-13 69.3
MS.gene048432.t1 AT5G07320 24.623 199 123 5 8 200 300 477 1.62e-11 65.1
MS.gene048432.t1 AT3G51870 24.460 278 189 7 21 297 104 361 7.93e-13 68.6
MS.gene048432.t1 AT2G22500 28.723 188 110 8 21 199 136 308 8.05e-13 68.2
MS.gene048432.t1 AT2G22500 25.806 310 187 11 14 293 9 305 4.17e-12 65.9
MS.gene048432.t1 AT5G15640 25.000 288 185 10 23 293 43 316 9.03e-13 68.2
MS.gene048432.t1 AT5G15640 25.000 288 185 10 23 293 36 309 1.04e-12 67.8
MS.gene048432.t1 AT5G64970 26.199 271 159 9 50 296 45 298 2.59e-12 66.6
MS.gene048432.t1 AT5G64970 26.199 271 159 9 50 296 169 422 5.53e-12 66.2
MS.gene048432.t1 AT1G72820 29.744 195 113 5 108 291 31 212 5.89e-12 65.9
MS.gene048432.t1 AT1G72820 29.744 195 113 5 108 291 31 212 5.89e-12 65.9
MS.gene048432.t1 AT4G24570 26.045 311 193 9 14 296 9 310 1.13e-11 64.7
MS.gene048432.t1 AT5G13490 25.606 289 191 9 3 279 83 359 1.38e-11 65.1
MS.gene048432.t1 AT5G13490 25.606 289 191 9 3 279 83 359 1.38e-11 65.1
MS.gene048432.t1 AT3G53940 31.973 147 86 4 157 294 118 259 5.80e-11 62.4

Find 113 sgRNAs with CRISPR-Local

Find 145 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTGGCCGGTGCTTCTTTC+TGG -0.061490 8.3:+35779211 MS.gene048432:CDS
CTTGGCCGGTGCTTCTTTCT+GGG 0.241979 8.3:+35779212 MS.gene048432:CDS
GGTCAGCCTCCCAGGTATTC+TGG 0.246669 8.3:+35777926 MS.gene048432:CDS
TGCAAATGCAGCATGCTTCT+TGG 0.250480 8.3:+35779398 MS.gene048432:CDS
TATAAGAACCCTAAGTATTC+TGG 0.276831 8.3:+35779285 MS.gene048432:CDS
ATGCTGTCCTGTTTACAGTT+AGG 0.302096 8.3:+35778044 MS.gene048432:CDS
AAAGGCCTATACAAGGGTTT+TGG 0.323072 8.3:+35779351 MS.gene048432:CDS
GCAGCTGTGGCTGTTAAATA+TGG 0.323087 8.3:+35778988 MS.gene048432:CDS
CAACAGTTTGTTTGTGGAGC+TGG 0.331068 8.3:+35778121 MS.gene048432:CDS
CCAAACATTATCGCGTTTCC+AGG 0.344503 8.3:-35779105 None:intergenic
GCTTTGGAGCTTGACCTTGA+TGG 0.347593 8.3:-35777885 None:intergenic
AAGAAGCATGCTGCATTTGC+AGG 0.353862 8.3:-35779396 None:intergenic
TGCTGTCCTGTTTACAGTTA+GGG 0.360522 8.3:+35778045 MS.gene048432:CDS
CAAGCACAAAGTGCGCTTGC+TGG 0.375899 8.3:+35778955 MS.gene048432:CDS
GTATAAACCCCTTGGACCTT+CGG 0.379175 8.3:-35777981 None:intergenic
CAAGGTTCTCTGATTGTTGC+TGG 0.380140 8.3:+35779186 MS.gene048432:CDS
GGAGTGGTGTAGGTTGGCTT+TGG 0.381162 8.3:-35777901 None:intergenic
GTGAATCAACAGTTTGTTTG+TGG 0.384671 8.3:+35778115 MS.gene048432:CDS
CACTCCCTGGTCAGCCTCCC+AGG 0.390074 8.3:+35777918 MS.gene048432:CDS
CAAAGTGCGCTTGCTGGCAC+TGG 0.391167 8.3:+35778961 MS.gene048432:CDS
GGCTGACCAGGGAGTGGTGT+AGG 0.403164 8.3:-35777911 None:intergenic
CCTGGAAACGCGATAATGTT+TGG 0.416228 8.3:+35779105 MS.gene048432:CDS
GCAATAAAACAACAGTTTGC+AGG 0.420000 8.3:+35779138 MS.gene048432:CDS
ATTGTTGCTGGAGGCTTGGC+CGG 0.422785 8.3:+35779198 MS.gene048432:CDS
GGAACACTTCTGCCCATTGC+AGG 0.423868 8.3:-35779375 None:intergenic
TCTGATTGTTGCTGGAGGCT+TGG 0.427870 8.3:+35779194 MS.gene048432:CDS
GTTTACAGTTAGGGGACAAA+TGG 0.441339 8.3:+35778054 MS.gene048432:CDS
TCAAATGAACCAGAATACTT+AGG 0.441953 8.3:-35779294 None:intergenic
ATCAAATGCACCAGAATACC+TGG 0.442262 8.3:-35777936 None:intergenic
TTCAGTTGGACAAGCAAGAA+AGG 0.442283 8.3:-35778161 None:intergenic
GAATACCTGGGAGGCTGACC+AGG 0.446488 8.3:-35777923 None:intergenic
GAGATGACAAGATCAGCTTT+AGG 0.446594 8.3:+35779426 MS.gene048432:CDS
TTTGTTTGTGGAGCTGGAGC+TGG 0.446739 8.3:+35778127 MS.gene048432:CDS
CCTCTGATCGGAGAACTTGT+CGG 0.450931 8.3:-35779029 None:intergenic
AGGTATCTCGCGTCCCATTG+TGG 0.455702 8.3:-35779085 None:intergenic
CTCTGATCGGAGAACTTGTC+GGG 0.461891 8.3:-35779028 None:intergenic
CAAATGAACCAGAATACTTA+GGG 0.470391 8.3:-35779293 None:intergenic
TTTGTCCCCTAACTGTAAAC+AGG 0.473371 8.3:-35778051 None:intergenic
CAGGACCAAAACCCTTGTAT+AGG 0.476463 8.3:-35779356 None:intergenic
AAGGGGTTTATACAAAGGTA+TGG 0.477080 8.3:+35777991 MS.gene048432:CDS
AAAGGCTTACTTCCCACAAT+GGG 0.478747 8.3:+35779072 MS.gene048432:CDS
CGCAGCCCCTCCAATGGTAC+CGG 0.479760 8.3:-35777834 None:intergenic
CTGGTGCATTTGATGCCGTC+AGG 0.479987 8.3:+35777945 MS.gene048432:CDS
TGTAAACAGGACAGCATTGA+AGG 0.482656 8.3:-35778038 None:intergenic
CTGCATTTGATTAATTCAGT+TGG 0.482770 8.3:-35778175 None:intergenic
GACCTAGCAGCCGGTACCAT+TGG 0.483515 8.3:+35777824 MS.gene048432:CDS
GGTATCTCGCGTCCCATTGT+GGG 0.485877 8.3:-35779084 None:intergenic
CTTGACCTTGATGGTGTCAA+AGG 0.491589 8.3:-35777876 None:intergenic
CTCCAATGGTACCGGCTGCT+AGG 0.495927 8.3:-35777826 None:intergenic
GCAGGCGGCACCGATACCTC+TGG 0.499521 8.3:+35779156 MS.gene048432:CDS
TTGGCTTAGGCCAGAGGTAT+CGG 0.500077 8.3:-35779166 None:intergenic
CGTTAGCGGCCGAAGGTCCA+AGG 0.505132 8.3:+35777972 MS.gene048432:CDS
GACCAGGGAGTGGTGTAGGT+TGG 0.511203 8.3:-35777907 None:intergenic
ATACCTTTGTATAAACCCCT+TGG 0.513759 8.3:-35777989 None:intergenic
TGGCACTGGAACAGCAGCTG+TGG 0.515388 8.3:+35778975 MS.gene048432:CDS
AGGCTGCAACCGTAGCAAGC+GGG 0.515933 8.3:-35778018 None:intergenic
TGCCGTCAGGCAGACGTTAG+CGG 0.518635 8.3:+35777958 MS.gene048432:CDS
TTGGCCGGTGCTTCTTTCTG+GGG 0.522148 8.3:+35779213 MS.gene048432:CDS
GGCTGCAACCGTAGCAAGCG+GGG 0.523372 8.3:-35778017 None:intergenic
TATGGGCGCCCCGCTTGCTA+CGG 0.523381 8.3:+35778009 MS.gene048432:CDS
ACTTGTCGGGCCACATCCAT+TGG 0.524980 8.3:-35779015 None:intergenic
CTAGCAGCCGGTACCATTGG+AGG 0.528586 8.3:+35777827 MS.gene048432:CDS
GGGGCTGCGCAATTGATAGT+TGG 0.530364 8.3:+35777848 MS.gene048432:CDS
CAATCAGAGAACCTTGGCTT+AGG 0.532063 8.3:-35779179 None:intergenic
CGACAAGTTCTCCGATCAGA+GGG 0.540590 8.3:+35779030 MS.gene048432:CDS
ACAATGGGACGCGAGATACC+TGG 0.540792 8.3:+35779087 MS.gene048432:CDS
AGAAAGATTAAAGCCACTGA+GGG 0.552045 8.3:+35779324 MS.gene048432:CDS
CAACTGAATTAATCAAATGC+AGG 0.556324 8.3:+35778176 MS.gene048432:CDS
CTGGGAGGCTGACCAGGGAG+TGG 0.557597 8.3:-35777917 None:intergenic
GATGCCCCAGAAAGAAGCAC+CGG 0.559324 8.3:-35779217 None:intergenic
CAAAGGCTTACTTCCCACAA+TGG 0.559394 8.3:+35779071 MS.gene048432:CDS
GGGATTCAAAGGCCTATACA+AGG 0.561547 8.3:+35779344 MS.gene048432:CDS
GGTTCTCTGATTGTTGCTGG+AGG 0.565281 8.3:+35779189 MS.gene048432:CDS
TTCACTGTGAGGTGAGCACC+AGG 0.566575 8.3:-35778097 None:intergenic
GGCCGCTAACGTCTGCCTGA+CGG 0.568359 8.3:-35777960 None:intergenic
TAGCAGCCGGTACCATTGGA+GGG 0.570109 8.3:+35777828 MS.gene048432:CDS
ACATCCCTTTGACACCATCA+AGG 0.573529 8.3:+35777871 MS.gene048432:CDS
ATAGATGGGAGACGTGGCTA+AGG 0.574654 8.3:+35777802 None:intergenic
GTTAGCGGCCGAAGGTCCAA+GGG 0.574705 8.3:+35777973 MS.gene048432:CDS
CCGACAAGTTCTCCGATCAG+AGG 0.577088 8.3:+35779029 MS.gene048432:CDS
CTGTGAGGTGAGCACCAGGA+TGG 0.578425 8.3:-35778093 None:intergenic
AGCAGCCGGTACCATTGGAG+GGG 0.579441 8.3:+35777829 MS.gene048432:CDS
AAAGCCACTGAGGGATTCAA+AGG 0.580482 8.3:+35779333 MS.gene048432:CDS
AGCCAACCTACACCACTCCC+TGG 0.582219 8.3:+35777905 MS.gene048432:CDS
TCATTAGTGAGGTCCCATCC+TGG 0.583140 8.3:+35778079 MS.gene048432:CDS
CAGCAACAATCAGAGAACCT+TGG 0.584834 8.3:-35779185 None:intergenic
AGGCAGACGTTAGCGGCCGA+AGG 0.586497 8.3:+35777965 MS.gene048432:CDS
AGGGGTTTATACAAAGGTAT+GGG 0.586855 8.3:+35777992 MS.gene048432:CDS
CAATTGCGCAGCCCCTCCAA+TGG 0.589387 8.3:-35777840 None:intergenic
AAGGCTGCAACCGTAGCAAG+CGG 0.590188 8.3:-35778019 None:intergenic
ACAAGTTCTCCGATCAGAGG+GGG 0.595172 8.3:+35779032 MS.gene048432:CDS
ATATGGAGGACCAATGGATG+TGG 0.607442 8.3:+35779005 MS.gene048432:CDS
GATACCTCTGGCCTAAGCCA+AGG 0.607559 8.3:+35779168 MS.gene048432:CDS
TTGACCTTGATGGTGTCAAA+GGG 0.607728 8.3:-35777875 None:intergenic
AGAACCTTGGCTTAGGCCAG+AGG 0.608842 8.3:-35779172 None:intergenic
TGTGAGGTGAGCACCAGGAT+GGG 0.609525 8.3:-35778092 None:intergenic
GCTGTCCTGTTTACAGTTAG+GGG 0.610080 8.3:+35778046 MS.gene048432:CDS
GACAAGTTCTCCGATCAGAG+GGG 0.621299 8.3:+35779031 MS.gene048432:CDS
GGTCCAAGGGGTTTATACAA+AGG 0.624894 8.3:+35777986 MS.gene048432:CDS
GTGGCTAAGGACCTAGCAGC+CGG 0.636617 8.3:+35777815 MS.gene048432:CDS
GCTGTGGCTGTTAAATATGG+AGG 0.641249 8.3:+35778991 MS.gene048432:CDS
CAGAAAGATTAAAGCCACTG+AGG 0.646297 8.3:+35779323 MS.gene048432:CDS
TAGGCCTTTGAATCCCTCAG+TGG 0.646577 8.3:-35779337 None:intergenic
AATACCTGGGAGGCTGACCA+GGG 0.652600 8.3:-35777922 None:intergenic
CAAGTTCTCCGATCAGAGGG+GGG 0.661799 8.3:+35779033 MS.gene048432:CDS
TGTTAAATATGGAGGACCAA+TGG 0.664961 8.3:+35778999 MS.gene048432:CDS
GACAAATGGAATCATTAGTG+AGG 0.669383 8.3:+35778068 MS.gene048432:CDS
GGATTCAAAGGCCTATACAA+GGG 0.670176 8.3:+35779345 MS.gene048432:CDS
TCAAATGCACCAGAATACCT+GGG 0.678659 8.3:-35777935 None:intergenic
ATAAAACAACAGTTTGCAGG+CGG 0.699836 8.3:+35779141 MS.gene048432:CDS
TTAGCGGCCGAAGGTCCAAG+GGG 0.724026 8.3:+35777974 MS.gene048432:CDS
CAAACTGTTGATTCACTGTG+AGG 0.745264 8.3:-35778108 None:intergenic
AATGCACCAGAATACCTGGG+AGG 0.779847 8.3:-35777932 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCAATGAAAATTTAATAA+AGG - chr8.3:35778277-35778296 None:intergenic 10.0%
!! ATCAATGAAAATTTAATAAA+GGG - chr8.3:35778276-35778295 None:intergenic 10.0%
!! TCAAAATTAAAATAAAAAAG+TGG - chr8.3:35778548-35778567 None:intergenic 10.0%
!! TTCATATATTATTTAAACAC+AGG + chr8.3:35778861-35778880 MS.gene048432:intron 15.0%
!! AATGAAAATTTAATAAAGGG+AGG - chr8.3:35778273-35778292 None:intergenic 20.0%
!! TACAAATTGATTGAAAGAAA+AGG - chr8.3:35778226-35778245 None:intergenic 20.0%
!!! GTTTCATTTTGAATAACATT+AGG + chr8.3:35778929-35778948 MS.gene048432:intron 20.0%
! AAAATACGCCTCATATTTAT+CGG - chr8.3:35778412-35778431 None:intergenic 25.0%
! AAGTTTAGGTAAGATTCATT+AGG - chr8.3:35778514-35778533 None:intergenic 25.0%
! AGTTTAGGTAAGATTCATTA+GGG - chr8.3:35778513-35778532 None:intergenic 25.0%
!! AAAACTTGATTTGATAACCA+TGG + chr8.3:35778772-35778791 MS.gene048432:intron 25.0%
!! ACACTTTTAATAACATCAGT+TGG - chr8.3:35779249-35779268 None:intergenic 25.0%
!! CACTTTTAATAACATCAGTT+GGG - chr8.3:35779248-35779267 None:intergenic 25.0%
!! TCGACTTTGTACTTAATTTT+TGG + chr8.3:35778907-35778926 MS.gene048432:intron 25.0%
!!! TCAAGTTTTATGTTGTGAAT+TGG - chr8.3:35778761-35778780 None:intergenic 25.0%
!!! TCATTGATTTTGATCTCTTT+AGG + chr8.3:35778288-35778307 MS.gene048432:intron 25.0%
AAACCAGATTGTCATAAGAT+TGG + chr8.3:35778373-35778392 MS.gene048432:intron 30.0%
AGTATCTTCCGATAAATATG+AGG + chr8.3:35778401-35778420 MS.gene048432:intron 30.0%
CAAATGAACCAGAATACTTA+GGG - chr8.3:35779296-35779315 None:intergenic 30.0%
CAACTGAATTAATCAAATGC+AGG + chr8.3:35778176-35778195 MS.gene048432:CDS 30.0%
CTGCATTTGATTAATTCAGT+TGG - chr8.3:35778178-35778197 None:intergenic 30.0%
TAACCAATCTTATGACAATC+TGG - chr8.3:35778379-35778398 None:intergenic 30.0%
TATAAGAACCCTAAGTATTC+TGG + chr8.3:35779285-35779304 MS.gene048432:CDS 30.0%
TCAAATGAACCAGAATACTT+AGG - chr8.3:35779297-35779316 None:intergenic 30.0%
TCAGTTTATTCTTATGACCA+TGG - chr8.3:35778792-35778811 None:intergenic 30.0%
TGAATTAATCAAATGCAGGT+AGG + chr8.3:35778180-35778199 MS.gene048432:intron 30.0%
AAGGGGTTTATACAAAGGTA+TGG + chr8.3:35777991-35778010 MS.gene048432:CDS 35.0%
AGAAAGATTAAAGCCACTGA+GGG + chr8.3:35779324-35779343 MS.gene048432:CDS 35.0%
ATAAAACAACAGTTTGCAGG+CGG + chr8.3:35779141-35779160 MS.gene048432:CDS 35.0%
ATACCTTTGTATAAACCCCT+TGG - chr8.3:35777992-35778011 None:intergenic 35.0%
GACAAATGGAATCATTAGTG+AGG + chr8.3:35778068-35778087 MS.gene048432:CDS 35.0%
GCAATAAAACAACAGTTTGC+AGG + chr8.3:35779138-35779157 MS.gene048432:CDS 35.0%
TGCAAAATAGATAGACACTG+AGG - chr8.3:35778471-35778490 None:intergenic 35.0%
TGGTTTATGTCAACTATGAG+AGG - chr8.3:35778359-35778378 None:intergenic 35.0%
TGTTAAATATGGAGGACCAA+TGG + chr8.3:35778999-35779018 MS.gene048432:CDS 35.0%
TTATGTCAACTATGAGAGGA+CGG - chr8.3:35778355-35778374 None:intergenic 35.0%
! AGGGGTTTATACAAAGGTAT+GGG + chr8.3:35777992-35778011 MS.gene048432:CDS 35.0%
! GTGAATCAACAGTTTGTTTG+TGG + chr8.3:35778115-35778134 MS.gene048432:CDS 35.0%
!! ACTGAGGATTTGTATCGATT+GGG - chr8.3:35778455-35778474 None:intergenic 35.0%
AAAGGCTTACTTCCCACAAT+GGG + chr8.3:35779072-35779091 MS.gene048432:CDS 40.0%
ATCAAATGCACCAGAATACC+TGG - chr8.3:35777939-35777958 None:intergenic 40.0%
ATGCTGTCCTGTTTACAGTT+AGG + chr8.3:35778044-35778063 MS.gene048432:CDS 40.0%
CAGAAAGATTAAAGCCACTG+AGG + chr8.3:35779323-35779342 MS.gene048432:CDS 40.0%
GAGATGACAAGATCAGCTTT+AGG + chr8.3:35779426-35779445 MS.gene048432:CDS 40.0%
GGATTCAAAGGCCTATACAA+GGG + chr8.3:35779345-35779364 MS.gene048432:CDS 40.0%
GTTTACAGTTAGGGGACAAA+TGG + chr8.3:35778054-35778073 MS.gene048432:CDS 40.0%
TCAAATGCACCAGAATACCT+GGG - chr8.3:35777938-35777957 None:intergenic 40.0%
TGCTGTCCTGTTTACAGTTA+GGG + chr8.3:35778045-35778064 MS.gene048432:CDS 40.0%
TGGACGAGTACACTAAGTTT+AGG - chr8.3:35778528-35778547 None:intergenic 40.0%
TTCAGTTGGACAAGCAAGAA+AGG - chr8.3:35778164-35778183 None:intergenic 40.0%
TTTGTCCCCTAACTGTAAAC+AGG - chr8.3:35778054-35778073 None:intergenic 40.0%
! AAAGGCCTATACAAGGGTTT+TGG + chr8.3:35779351-35779370 MS.gene048432:CDS 40.0%
! CACTGAGGATTTGTATCGAT+TGG - chr8.3:35778456-35778475 None:intergenic 40.0%
! TGTAAACAGGACAGCATTGA+AGG - chr8.3:35778041-35778060 None:intergenic 40.0%
!! CAAACTGTTGATTCACTGTG+AGG - chr8.3:35778111-35778130 None:intergenic 40.0%
!! CTGAGGATTTGTATCGATTG+GGG - chr8.3:35778454-35778473 None:intergenic 40.0%
!! TTGACCTTGATGGTGTCAAA+GGG - chr8.3:35777878-35777897 None:intergenic 40.0%
AAAGCCACTGAGGGATTCAA+AGG + chr8.3:35779333-35779352 MS.gene048432:CDS 45.0%
ACATCCCTTTGACACCATCA+AGG + chr8.3:35777871-35777890 MS.gene048432:CDS 45.0%
ATATGGAGGACCAATGGATG+TGG + chr8.3:35779005-35779024 MS.gene048432:CDS 45.0%
CAAAGGCTTACTTCCCACAA+TGG + chr8.3:35779071-35779090 MS.gene048432:CDS 45.0%
CAAGGTTCTCTGATTGTTGC+TGG + chr8.3:35779186-35779205 MS.gene048432:CDS 45.0%
CAATCAGAGAACCTTGGCTT+AGG - chr8.3:35779182-35779201 None:intergenic 45.0%
CAGCAACAATCAGAGAACCT+TGG - chr8.3:35779188-35779207 None:intergenic 45.0%
CAGGACCAAAACCCTTGTAT+AGG - chr8.3:35779359-35779378 None:intergenic 45.0%
CCAAACATTATCGCGTTTCC+AGG - chr8.3:35779108-35779127 None:intergenic 45.0%
CCTGGAAACGCGATAATGTT+TGG + chr8.3:35779105-35779124 MS.gene048432:CDS 45.0%
GCAGCTGTGGCTGTTAAATA+TGG + chr8.3:35778988-35779007 MS.gene048432:CDS 45.0%
GCTGTCCTGTTTACAGTTAG+GGG + chr8.3:35778046-35778065 MS.gene048432:CDS 45.0%
GCTGTGGCTGTTAAATATGG+AGG + chr8.3:35778991-35779010 MS.gene048432:CDS 45.0%
GGGATTCAAAGGCCTATACA+AGG + chr8.3:35779344-35779363 MS.gene048432:CDS 45.0%
GGTCCAAGGGGTTTATACAA+AGG + chr8.3:35777986-35778005 MS.gene048432:CDS 45.0%
GTATAAACCCCTTGGACCTT+CGG - chr8.3:35777984-35778003 None:intergenic 45.0%
TGCAAATGCAGCATGCTTCT+TGG + chr8.3:35779398-35779417 MS.gene048432:CDS 45.0%
! AAGAAGCATGCTGCATTTGC+AGG - chr8.3:35779399-35779418 None:intergenic 45.0%
! CAACAGTTTGTTTGTGGAGC+TGG + chr8.3:35778121-35778140 MS.gene048432:CDS 45.0%
!! AAGGGTTTTGGTCCTGCAAT+GGG + chr8.3:35779363-35779382 MS.gene048432:CDS 45.0%
!! CTTGACCTTGATGGTGTCAA+AGG - chr8.3:35777879-35777898 None:intergenic 45.0%
AATGCACCAGAATACCTGGG+AGG - chr8.3:35777935-35777954 None:intergenic 50.0%
ACAAGTTCTCCGATCAGAGG+GGG + chr8.3:35779032-35779051 MS.gene048432:CDS 50.0%
CCTCTGATCGGAGAACTTGT+CGG - chr8.3:35779032-35779051 None:intergenic 50.0%
CGACAAGTTCTCCGATCAGA+GGG + chr8.3:35779030-35779049 MS.gene048432:CDS 50.0%
CTCTGATCGGAGAACTTGTC+GGG - chr8.3:35779031-35779050 None:intergenic 50.0%
GACAAGTTCTCCGATCAGAG+GGG + chr8.3:35779031-35779050 MS.gene048432:CDS 50.0%
GGTTCTCTGATTGTTGCTGG+AGG + chr8.3:35779189-35779208 MS.gene048432:CDS 50.0%
TAGGCCTTTGAATCCCTCAG+TGG - chr8.3:35779340-35779359 None:intergenic 50.0%
TCATTAGTGAGGTCCCATCC+TGG + chr8.3:35778079-35778098 MS.gene048432:CDS 50.0%
TCTGATTGTTGCTGGAGGCT+TGG + chr8.3:35779194-35779213 MS.gene048432:CDS 50.0%
TTTGTTTGTGGAGCTGGAGC+TGG + chr8.3:35778127-35778146 MS.gene048432:CDS 50.0%
! GGCGTGAGAGGTCTTTTCAA+AGG + chr8.3:35779054-35779073 MS.gene048432:CDS 50.0%
! TTGGCTTAGGCCAGAGGTAT+CGG - chr8.3:35779169-35779188 None:intergenic 50.0%
!! CAAGGGTTTTGGTCCTGCAA+TGG + chr8.3:35779362-35779381 MS.gene048432:CDS 50.0%
!! GCTTTGGAGCTTGACCTTGA+TGG - chr8.3:35777888-35777907 None:intergenic 50.0%
AAGGCTGCAACCGTAGCAAG+CGG - chr8.3:35778022-35778041 None:intergenic 55.0%
AATACCTGGGAGGCTGACCA+GGG - chr8.3:35777925-35777944 None:intergenic 55.0%
ACAATGGGACGCGAGATACC+TGG + chr8.3:35779087-35779106 MS.gene048432:CDS 55.0%
ACTTGTCGGGCCACATCCAT+TGG - chr8.3:35779018-35779037 None:intergenic 55.0%
AGAACCTTGGCTTAGGCCAG+AGG - chr8.3:35779175-35779194 None:intergenic 55.0%
AGGTATCTCGCGTCCCATTG+TGG - chr8.3:35779088-35779107 None:intergenic 55.0%
ATTGTTGCTGGAGGCTTGGC+CGG + chr8.3:35779198-35779217 MS.gene048432:CDS 55.0%
CAAGCACAAAGTGCGCTTGC+TGG + chr8.3:35778955-35778974 MS.gene048432:CDS 55.0%
CAAGTTCTCCGATCAGAGGG+GGG + chr8.3:35779033-35779052 MS.gene048432:CDS 55.0%
CCGACAAGTTCTCCGATCAG+AGG + chr8.3:35779029-35779048 MS.gene048432:CDS 55.0%
CTGGTGCATTTGATGCCGTC+AGG + chr8.3:35777945-35777964 MS.gene048432:CDS 55.0%
CTTGGCCGGTGCTTCTTTCT+GGG + chr8.3:35779212-35779231 MS.gene048432:CDS 55.0%
GATACCTCTGGCCTAAGCCA+AGG + chr8.3:35779168-35779187 MS.gene048432:CDS 55.0%
GGAACACTTCTGCCCATTGC+AGG - chr8.3:35779378-35779397 None:intergenic 55.0%
GGTATCTCGCGTCCCATTGT+GGG - chr8.3:35779087-35779106 None:intergenic 55.0%
TAGCAGCCGGTACCATTGGA+GGG + chr8.3:35777828-35777847 MS.gene048432:CDS 55.0%
TGTGAGGTGAGCACCAGGAT+GGG - chr8.3:35778095-35778114 None:intergenic 55.0%
TTCACTGTGAGGTGAGCACC+AGG - chr8.3:35778100-35778119 None:intergenic 55.0%
TTGGCCGGTGCTTCTTTCTG+GGG + chr8.3:35779213-35779232 MS.gene048432:CDS 55.0%
! GATGCCCCAGAAAGAAGCAC+CGG - chr8.3:35779220-35779239 None:intergenic 55.0%
! GGGGCTGCGCAATTGATAGT+TGG + chr8.3:35777848-35777867 MS.gene048432:CDS 55.0%
!! GGAGTGGTGTAGGTTGGCTT+TGG - chr8.3:35777904-35777923 None:intergenic 55.0%
AGCAGCCGGTACCATTGGAG+GGG + chr8.3:35777829-35777848 MS.gene048432:CDS 60.0%
AGCCAACCTACACCACTCCC+TGG + chr8.3:35777905-35777924 MS.gene048432:CDS 60.0%
AGGCTGCAACCGTAGCAAGC+GGG - chr8.3:35778021-35778040 None:intergenic 60.0%
CAATTGCGCAGCCCCTCCAA+TGG - chr8.3:35777843-35777862 None:intergenic 60.0%
CTAGCAGCCGGTACCATTGG+AGG + chr8.3:35777827-35777846 MS.gene048432:CDS 60.0%
CTGTGAGGTGAGCACCAGGA+TGG - chr8.3:35778096-35778115 None:intergenic 60.0%
GAATACCTGGGAGGCTGACC+AGG - chr8.3:35777926-35777945 None:intergenic 60.0%
GACCAGGGAGTGGTGTAGGT+TGG - chr8.3:35777910-35777929 None:intergenic 60.0%
GACCTAGCAGCCGGTACCAT+TGG + chr8.3:35777824-35777843 MS.gene048432:CDS 60.0%
GCTTGGCCGGTGCTTCTTTC+TGG + chr8.3:35779211-35779230 MS.gene048432:CDS 60.0%
GGTCAGCCTCCCAGGTATTC+TGG + chr8.3:35777926-35777945 MS.gene048432:CDS 60.0%
GTGGCTAAGGACCTAGCAGC+CGG + chr8.3:35777815-35777834 MS.gene048432:CDS 60.0%
GTTAGCGGCCGAAGGTCCAA+GGG + chr8.3:35777973-35777992 MS.gene048432:CDS 60.0%
TGCCGTCAGGCAGACGTTAG+CGG + chr8.3:35777958-35777977 MS.gene048432:CDS 60.0%
TTAGCGGCCGAAGGTCCAAG+GGG + chr8.3:35777974-35777993 MS.gene048432:CDS 60.0%
! CAAAGTGCGCTTGCTGGCAC+TGG + chr8.3:35778961-35778980 MS.gene048432:CDS 60.0%
! TGGCACTGGAACAGCAGCTG+TGG + chr8.3:35778975-35778994 MS.gene048432:CDS 60.0%
!! CTCCAATGGTACCGGCTGCT+AGG - chr8.3:35777829-35777848 None:intergenic 60.0%
AGGCAGACGTTAGCGGCCGA+AGG + chr8.3:35777965-35777984 MS.gene048432:CDS 65.0%
CGCAGCCCCTCCAATGGTAC+CGG - chr8.3:35777837-35777856 None:intergenic 65.0%
CGTTAGCGGCCGAAGGTCCA+AGG + chr8.3:35777972-35777991 MS.gene048432:CDS 65.0%
CTCTCACGCCCCCCTCTGAT+CGG - chr8.3:35779044-35779063 None:intergenic 65.0%
GGCCGCTAACGTCTGCCTGA+CGG - chr8.3:35777963-35777982 None:intergenic 65.0%
GGCTGACCAGGGAGTGGTGT+AGG - chr8.3:35777914-35777933 None:intergenic 65.0%
GGCTGCAACCGTAGCAAGCG+GGG - chr8.3:35778020-35778039 None:intergenic 65.0%
! TATGGGCGCCCCGCTTGCTA+CGG + chr8.3:35778009-35778028 MS.gene048432:CDS 65.0%
CACTCCCTGGTCAGCCTCCC+AGG + chr8.3:35777918-35777937 MS.gene048432:CDS 70.0%
CTGGGAGGCTGACCAGGGAG+TGG - chr8.3:35777920-35777939 None:intergenic 70.0%
! CGATCAGAGGGGGGCGTGAG+AGG + chr8.3:35779042-35779061 MS.gene048432:CDS 70.0%
!! GCAGGCGGCACCGATACCTC+TGG + chr8.3:35779156-35779175 MS.gene048432:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 35777806 35779452 35777806 ID=MS.gene048432
chr8.3 mRNA 35777806 35779452 35777806 ID=MS.gene048432.t1;Parent=MS.gene048432
chr8.3 exon 35777806 35778197 35777806 ID=MS.gene048432.t1.exon1;Parent=MS.gene048432.t1
chr8.3 CDS 35777806 35778197 35777806 ID=cds.MS.gene048432.t1;Parent=MS.gene048432.t1
chr8.3 exon 35778951 35779452 35778951 ID=MS.gene048432.t1.exon2;Parent=MS.gene048432.t1
chr8.3 CDS 35778951 35779452 35778951 ID=cds.MS.gene048432.t1;Parent=MS.gene048432.t1
Gene Sequence

>MS.gene048432

ATGGGAGACGTGGCTAAGGACCTAGCAGCCGGTACCATTGGAGGGGCTGCGCAATTGATAGTTGGACATCCCTTTGACACCATCAAGGTCAAGCTCCAAAGCCAACCTACACCACTCCCTGGTCAGCCTCCCAGGTATTCTGGTGCATTTGATGCCGTCAGGCAGACGTTAGCGGCCGAAGGTCCAAGGGGTTTATACAAAGGTATGGGCGCCCCGCTTGCTACGGTTGCAGCCTTCAATGCTGTCCTGTTTACAGTTAGGGGACAAATGGAATCATTAGTGAGGTCCCATCCTGGTGCTCACCTCACAGTGAATCAACAGTTTGTTTGTGGAGCTGGAGCTGGTGTCGCTGTTTCCTTTCTTGCTTGTCCAACTGAATTAATCAAATGCAGGTAGGTCAGCTGTTCTAATTTTCTTCCTTTTCTTTCAATCAATTTGTATAGATTTTTAACGTTCTTTATTCTCCTCCCTTTATTAAATTTTCATTGATTTTGATCTCTTTAGGAAAGAATAGAACTTTTTAGTTTTTATTTGTTTCTCTATAAACCGTCCTCTCATAGTTGACATAAACCAGATTGTCATAAGATTGGTTATCAGTATCTTCCGATAAATATGAGGCGTATTTTGATTTGATTAAAAATTGAACCCCAATCGATACAAATCCTCAGTGTCTATCTATTTTGCACATGTATTTCGTCTTGAATCCCTAATGAATCTTACCTAAACTTAGTGTACTCGTCCACTTTTTTATTTTAATTTTGAATAGTCAGTCACTTTTCTTTTGTCATTTGATTCAAAACTTAATTCTTGAATTATTTTGAAATTCATACATGATATATCAGCTCATGATTTTGCTACGTCACTTGTTTTTTTACGTAAAATGTCTTATTTTAATCAGTAATGTATCGTATGATTCATTAAGATTCGATTCACGTTTCAGAAAATAGTTCTTCCAATTCACAACATAAAACTTGATTTGATAACCATGGTCATAAGAATAAACTGAATGAATTCAGCAGCAGATTAGTCATATGATTAGCTATTGCTTATGATTTTTCATATATTATTTAAACACAGGTACTCTGATACTCAAACTATGTATCGACTTTGTACTTAATTTTTGGTTTCATTTTGAATAACATTAGGTTGCAAGCACAAAGTGCGCTTGCTGGCACTGGAACAGCAGCTGTGGCTGTTAAATATGGAGGACCAATGGATGTGGCCCGACAAGTTCTCCGATCAGAGGGGGGCGTGAGAGGTCTTTTCAAAGGCTTACTTCCCACAATGGGACGCGAGATACCTGGAAACGCGATAATGTTTGGTGTATATGAAGCAATAAAACAACAGTTTGCAGGCGGCACCGATACCTCTGGCCTAAGCCAAGGTTCTCTGATTGTTGCTGGAGGCTTGGCCGGTGCTTCTTTCTGGGGCATCGTTTACCCAACTGATGTTATTAAAAGTGTGCTTCAAGTAGATGATTATAAGAACCCTAAGTATTCTGGTTCATTTGATGCTTTCAGAAAGATTAAAGCCACTGAGGGATTCAAAGGCCTATACAAGGGTTTTGGTCCTGCAATGGGCAGAAGTGTTCCTGCAAATGCAGCATGCTTCTTGGCATATGAGATGACAAGATCAGCTTTAGGATGA
Protein sequence

>MS.gene048432.t1

MGDVAKDLAAGTIGGAAQLIVGHPFDTIKVKLQSQPTPLPGQPPRYSGAFDAVRQTLAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMESLVRSHPGAHLTVNQQFVCGAGAGVAVSFLACPTELIKCRLQAQSALAGTGTAAVAVKYGGPMDVARQVLRSEGGVRGLFKGLLPTMGREIPGNAIMFGVYEAIKQQFAGGTDTSGLSQGSLIVAGGLAGASFWGIVYPTDVIKSVLQVDDYKNPKYSGSFDAFRKIKATEGFKGLYKGFGPAMGRSVPANAACFLAYEMTRSALG