Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048963.t1 | XP_013447243.1 | 99.5 | 588 | 3 | 0 | 1 | 588 | 1 | 588 | 1.20E-304 | 1055 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048963.t1 | O81629 | 73.3 | 536 | 131 | 3 | 63 | 587 | 74 | 608 | 2.4e-216 | 753.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048963.t1 | A0A072U605 | 99.5 | 588 | 3 | 0 | 1 | 588 | 1 | 588 | 8.9e-305 | 1055.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene048963 | MS.gene22354 | PPI |
| MS.gene048963 | MS.gene069541 | PPI |
| MS.gene061041 | MS.gene048963 | PPI |
| MS.gene040149 | MS.gene048963 | PPI |
| MS.gene95892 | MS.gene048963 | PPI |
| MS.gene75846 | MS.gene048963 | PPI |
| MS.gene93780 | MS.gene048963 | PPI |
| MS.gene048963 | MS.gene80320 | PPI |
| MS.gene061659 | MS.gene048963 | PPI |
| MS.gene033840 | MS.gene048963 | PPI |
| MS.gene62618 | MS.gene048963 | PPI |
| MS.gene048963 | MS.gene020596 | PPI |
| MS.gene007355 | MS.gene048963 | PPI |
| MS.gene007592 | MS.gene048963 | PPI |
| MS.gene048963 | MS.gene026418 | PPI |
| MS.gene040852 | MS.gene048963 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048963.t1 | MTR_8g099745 | 99.490 | 588 | 3 | 0 | 1 | 588 | 1 | 588 | 0.0 | 1203 |
| MS.gene048963.t1 | MTR_8g027385 | 69.691 | 551 | 156 | 3 | 37 | 587 | 32 | 571 | 0.0 | 775 |
| MS.gene048963.t1 | MTR_6g007110 | 66.535 | 508 | 169 | 1 | 68 | 574 | 186 | 693 | 0.0 | 701 |
| MS.gene048963.t1 | MTR_3g077950 | 58.761 | 565 | 222 | 3 | 13 | 567 | 191 | 754 | 0.0 | 695 |
| MS.gene048963.t1 | MTR_3g077950 | 58.761 | 565 | 222 | 3 | 13 | 567 | 219 | 782 | 0.0 | 694 |
| MS.gene048963.t1 | MTR_4g106900 | 58.421 | 570 | 213 | 3 | 23 | 569 | 102 | 670 | 0.0 | 687 |
| MS.gene048963.t1 | MTR_6g007110 | 65.991 | 444 | 151 | 0 | 68 | 511 | 186 | 629 | 0.0 | 616 |
| MS.gene048963.t1 | MTR_1g070145 | 28.119 | 537 | 349 | 8 | 38 | 551 | 52 | 574 | 2.06e-49 | 181 |
| MS.gene048963.t1 | MTR_2g023050 | 69.792 | 96 | 28 | 1 | 480 | 574 | 3 | 98 | 2.58e-35 | 130 |
| MS.gene048963.t1 | MTR_6g006830 | 63.793 | 58 | 19 | 1 | 294 | 351 | 12 | 67 | 2.92e-20 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048963.t1 | AT4G10840 | 76.230 | 610 | 119 | 9 | 1 | 588 | 4 | 609 | 0.0 | 927 |
| MS.gene048963.t1 | AT4G10840 | 76.504 | 532 | 100 | 8 | 1 | 511 | 4 | 531 | 0.0 | 810 |
| MS.gene048963.t1 | AT4G10840 | 23.047 | 256 | 190 | 5 | 280 | 531 | 175 | 427 | 8.08e-11 | 65.1 |
| MS.gene048963.t1 | AT3G27960 | 59.239 | 552 | 203 | 8 | 32 | 569 | 109 | 652 | 0.0 | 652 |
| MS.gene048963.t1 | AT3G27960 | 59.239 | 552 | 203 | 8 | 32 | 569 | 109 | 652 | 0.0 | 652 |
| MS.gene048963.t1 | AT1G27500 | 59.808 | 520 | 208 | 1 | 50 | 569 | 135 | 653 | 0.0 | 642 |
| MS.gene048963.t1 | AT1G27500 | 59.808 | 520 | 208 | 1 | 50 | 569 | 124 | 642 | 0.0 | 641 |
| MS.gene048963.t1 | AT3G27960 | 58.907 | 494 | 181 | 8 | 32 | 511 | 109 | 594 | 0.0 | 583 |
| MS.gene048963.t1 | AT2G31240 | 27.307 | 531 | 352 | 8 | 38 | 547 | 73 | 590 | 5.88e-43 | 163 |
Find 166 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTTGTCCTCTTTGAATT+TGG | 0.058206 | 4.1:-4232486 | None:intergenic |
| GAGTTGGTGGTTGGGGTTTC+GGG | 0.091077 | 4.1:-4230502 | None:intergenic |
| GGGTGATTGGGTTGGTGTTT+TGG | 0.178570 | 4.1:-4230422 | None:intergenic |
| AGAGTTGGTGGTTGGGGTTT+CGG | 0.211921 | 4.1:-4230503 | None:intergenic |
| GATCTTTGAGTAGGGGTTTC+GGG | 0.248817 | 4.1:-4230391 | None:intergenic |
| TCCTTGATCATACATTAAAA+TGG | 0.256575 | 4.1:-4230884 | None:intergenic |
| CGGTGAAACCTGTCGCTATT+TGG | 0.258596 | 4.1:+4230951 | MS.gene048963:CDS |
| AACAAGAGGTGGCCTGGTTT+GGG | 0.288968 | 4.1:+4232516 | MS.gene048963:CDS |
| GGCGCAGCGTTCGAAGGATT+TGG | 0.308908 | 4.1:-4230647 | None:intergenic |
| CGCTTCTCATCTTCAAAATC+AGG | 0.310556 | 4.1:-4232387 | None:intergenic |
| GGGTTTCGGGTAAGGAGATT+CGG | 0.314955 | 4.1:-4230378 | None:intergenic |
| GAGGAGAGAGTTGGTGGTTG+GGG | 0.316666 | 4.1:-4230509 | None:intergenic |
| GGATCTTTGAGTAGGGGTTT+CGG | 0.325506 | 4.1:-4230392 | None:intergenic |
| GCTCATGGCGAGGTCGAGAC+TGG | 0.332492 | 4.1:-4230683 | None:intergenic |
| TTTGTTAGGGAGGGGTGATT+GGG | 0.335894 | 4.1:-4230434 | None:intergenic |
| TAACAAGAGGTGGCCTGGTT+TGG | 0.336300 | 4.1:+4232515 | MS.gene048963:CDS |
| AGAAGGAATGGACCGAGATC+TGG | 0.336404 | 4.1:-4230553 | None:intergenic |
| AGAGGAGAGAGTTGGTGGTT+GGG | 0.339813 | 4.1:-4230510 | None:intergenic |
| ATTTACTCGAAGCCGGTTCC+TGG | 0.341173 | 4.1:+4231411 | MS.gene048963:CDS |
| GCATCTTGTTCTGGCGAGTA+TGG | 0.342306 | 4.1:+4231143 | MS.gene048963:CDS |
| AGACAGAAAAGCAAAGTCTT+TGG | 0.357269 | 4.1:+4232449 | MS.gene048963:CDS |
| GGTTTCGGGTAAGGAGATTC+GGG | 0.358212 | 4.1:-4230377 | None:intergenic |
| GAGAGGAGAGAGTTGGTGGT+TGG | 0.364969 | 4.1:-4230511 | None:intergenic |
| GGCGTTGGAGCATCTTGTTC+TGG | 0.366170 | 4.1:+4231134 | MS.gene048963:CDS |
| ATCTCCTCTGCAGTAGTTCC+AGG | 0.370113 | 4.1:-4231429 | None:intergenic |
| TTCGAACGCTGCGCCGTTGA+AGG | 0.384353 | 4.1:+4230655 | MS.gene048963:CDS |
| ATTCGGGGCGGAGGTCCACC+TGG | 0.386549 | 4.1:-4230361 | None:intergenic |
| GACACTATCGCTTCCGGCGA+TGG | 0.393002 | 4.1:+4230589 | MS.gene048963:CDS |
| CATGCTCTTGCTGCTTTCTC+CGG | 0.394844 | 4.1:+4230811 | MS.gene048963:CDS |
| TTTGGCGGAGGCGAATGTTC+AGG | 0.402067 | 4.1:+4230969 | MS.gene048963:CDS |
| TTAGGGAGGGGTGATTGGGT+TGG | 0.402449 | 4.1:-4230430 | None:intergenic |
| TGGATCGCGCGTTCGAGAAC+AGG | 0.420650 | 4.1:-4230760 | None:intergenic |
| GCAGAAGGCAATGAAATTGT+TGG | 0.422889 | 4.1:+4231524 | MS.gene048963:CDS |
| GCGTGAAGAAGGAGAGGGAG+AGG | 0.424058 | 4.1:-4230464 | None:intergenic |
| GTTTAGCTGATTTGTATCAT+AGG | 0.424643 | 4.1:+4231340 | MS.gene048963:CDS |
| TGCTTTGGCGGGCCCATCGC+CGG | 0.428901 | 4.1:-4230602 | None:intergenic |
| AGCTGCAGATCGGAGACTTA+TGG | 0.429629 | 4.1:+4231077 | MS.gene048963:CDS |
| CTGAATTGTTTGAGGAAGCT+AGG | 0.429677 | 4.1:+4231763 | MS.gene048963:CDS |
| TAGAATATGTGCTGAAATTG+AGG | 0.430332 | 4.1:+4232340 | MS.gene048963:CDS |
| TTGAGTAGGGGTTTCGGGTA+AGG | 0.430843 | 4.1:-4230386 | None:intergenic |
| GGCATAGTCGAGTGCTTTGG+CGG | 0.446056 | 4.1:-4230614 | None:intergenic |
| AAAAGCTTCAACGCCTCCTC+TGG | 0.447073 | 4.1:-4231501 | None:intergenic |
| GGAGTGATGTATTATATGAT+TGG | 0.448077 | 4.1:+4231597 | MS.gene048963:CDS |
| TGGGTTATCGAGAGAGGCTT+CGG | 0.448263 | 4.1:-4230533 | None:intergenic |
| AAATCATCCTTCTGTTGCTT+CGG | 0.448548 | 4.1:+4231308 | MS.gene048963:CDS |
| TTCTTATCAGAAAGCGCTTA+CGG | 0.456405 | 4.1:+4231263 | MS.gene048963:CDS |
| CAGGAACAGCTTCTTCGAAT+CGG | 0.458327 | 4.1:-4230741 | None:intergenic |
| AGTAAATCGCGGCGAGGACA+TGG | 0.460428 | 4.1:-4230708 | None:intergenic |
| GCCCGCGACACTATCGCTTC+CGG | 0.461619 | 4.1:+4230583 | MS.gene048963:CDS |
| GTCACCTAACTGCATATAAC+CGG | 0.462709 | 4.1:-4230830 | None:intergenic |
| GATCGGTATCACCTAACGTT+TGG | 0.464180 | 4.1:-4230921 | None:intergenic |
| GGACAGCAGAGTACAGTTGC+GGG | 0.464453 | 4.1:+4231558 | MS.gene048963:CDS |
| AGGATTCGGATCTTTGAGTA+GGG | 0.466088 | 4.1:-4230399 | None:intergenic |
| TTCAAATATCGCTGAAACCT+CGG | 0.468954 | 4.1:-4231466 | None:intergenic |
| GCTGATTTGTATCATAGGAC+AGG | 0.468960 | 4.1:+4231345 | MS.gene048963:CDS |
| TTCTCCGGTTATATGCAGTT+AGG | 0.469245 | 4.1:+4230826 | MS.gene048963:CDS |
| TGCAGATTTCCTTTCCCCAC+TGG | 0.470744 | 4.1:-4231673 | None:intergenic |
| GAGGATTCGGATCTTTGAGT+AGG | 0.478050 | 4.1:-4230400 | None:intergenic |
| CTAATTCAATTCACCATGCC+TGG | 0.479549 | 4.1:+4230328 | None:intergenic |
| ATTTCCAATACTCACATCAA+TGG | 0.480593 | 4.1:-4231202 | None:intergenic |
| CGTGAAGAAGGAGAGGGAGA+GGG | 0.481663 | 4.1:-4230463 | None:intergenic |
| TGAAGCTGCTGAATTGTTTG+AGG | 0.486297 | 4.1:+4231755 | MS.gene048963:CDS |
| CGCCTCCGCCAAATAGCGAC+AGG | 0.487480 | 4.1:-4230959 | None:intergenic |
| GCAGCTTCTTCAAGAGAAGC+AGG | 0.490367 | 4.1:-4231060 | None:intergenic |
| GGTAAGGAGATTCGGGGCGG+AGG | 0.490779 | 4.1:-4230370 | None:intergenic |
| GATGGCATAGTCGAGTGCTT+TGG | 0.491407 | 4.1:-4230617 | None:intergenic |
| CAAATTCAGATCCAAACGTT+AGG | 0.491969 | 4.1:+4230910 | MS.gene048963:CDS |
| AACTTCATTATCTTGACCGT+TGG | 0.494243 | 4.1:-4231175 | None:intergenic |
| GCAACTGTACTCTGCTGTCC+AGG | 0.494600 | 4.1:-4231555 | None:intergenic |
| ACACTATCGCTTCCGGCGAT+GGG | 0.496301 | 4.1:+4230590 | MS.gene048963:CDS |
| GCTGAGTTGCTGAAAGAAGC+TGG | 0.496317 | 4.1:+4232417 | MS.gene048963:CDS |
| GCTTCCATTGATGTGAGTAT+TGG | 0.498324 | 4.1:+4231198 | MS.gene048963:CDS |
| TCGGCACCACGCTCAACATC+AGG | 0.500199 | 4.1:-4230787 | None:intergenic |
| GAAGAAGGAGAGGGAGAGGG+TGG | 0.505490 | 4.1:-4230460 | None:intergenic |
| GAGAGTAACAAGAGGTGGCC+TGG | 0.512764 | 4.1:+4232510 | MS.gene048963:CDS |
| TGCAGCTACTTACGATGCAA+TGG | 0.513646 | 4.1:+4231848 | MS.gene048963:CDS |
| TTCGGAGAGGAGAGAGTTGG+TGG | 0.514406 | 4.1:-4230515 | None:intergenic |
| AAAATATAGCTTCATCAAAA+CGG | 0.515154 | 4.1:-4231242 | None:intergenic |
| TGAATTGTTTGAGGAAGCTA+GGG | 0.515510 | 4.1:+4231764 | MS.gene048963:CDS |
| GAGACTGGGTTCACCTTCAA+CGG | 0.515665 | 4.1:-4230668 | None:intergenic |
| TTCGGGGCGGAGGTCCACCT+GGG | 0.520899 | 4.1:-4230360 | None:intergenic |
| ACTACTGCAGAGGAGATTGC+TGG | 0.521317 | 4.1:+4231435 | MS.gene048963:CDS |
| TCTTAGAATTTACTCGAAGC+CGG | 0.521538 | 4.1:+4231404 | MS.gene048963:CDS |
| AGAATATGTGCTGAAATTGA+GGG | 0.521695 | 4.1:+4232341 | MS.gene048963:CDS |
| GAAGGAATGGACCGAGATCT+GGG | 0.529262 | 4.1:-4230552 | None:intergenic |
| ATGCCTGGTCTTGTATCCCC+AGG | 0.530020 | 4.1:+4230343 | MS.gene048963:CDS |
| GAAAGCAGCAAGAGCATGAT+CGG | 0.533567 | 4.1:-4230806 | None:intergenic |
| GCATAGTCGAGTGCTTTGGC+GGG | 0.536165 | 4.1:-4230613 | None:intergenic |
| GAAGGATTTGGAAGCGCGGA+TGG | 0.537538 | 4.1:-4230635 | None:intergenic |
| CGGGCTACTTTGAGAAGGAA+TGG | 0.538375 | 4.1:-4230565 | None:intergenic |
| GCAGCTACTTACGATGCAAT+GGG | 0.540410 | 4.1:+4231849 | MS.gene048963:CDS |
| CGCCGGAAGCGATAGTGTCG+CGG | 0.541043 | 4.1:-4230585 | None:intergenic |
| CTTGGAGCGTGAAGAAGGAG+AGG | 0.542163 | 4.1:-4230470 | None:intergenic |
| CCACCTGGGGATACAAGACC+AGG | 0.542847 | 4.1:-4230346 | None:intergenic |
| TGAAACCTGTCGCTATTTGG+CGG | 0.545497 | 4.1:+4230954 | MS.gene048963:CDS |
| TCTGCAGTAGTTCCAGGAAC+CGG | 0.546580 | 4.1:-4231423 | None:intergenic |
| TCGGGTAAGGAGATTCGGGG+CGG | 0.551979 | 4.1:-4230373 | None:intergenic |
| CTCATGGCGAGGTCGAGACT+GGG | 0.554197 | 4.1:-4230682 | None:intergenic |
| GGCGAAAGGTGATTATGAAT+CGG | 0.554761 | 4.1:+4231113 | MS.gene048963:CDS |
| TGCGGGGATAGAAGCACGGA+TGG | 0.555487 | 4.1:+4231575 | MS.gene048963:CDS |
| CACGCTCAACATCAGGAACA+TGG | 0.557170 | 4.1:-4230780 | None:intergenic |
| CTGATTTGTATCATAGGACA+GGG | 0.557711 | 4.1:+4231346 | MS.gene048963:CDS |
| GGAGCTTTGTAACAAAACCT+TGG | 0.561166 | 4.1:+4231014 | MS.gene048963:CDS |
| GCCGGAAGCGATAGTGTCGC+GGG | 0.567266 | 4.1:-4230584 | None:intergenic |
| AACTGAGAACCAGTGGGGAA+AGG | 0.570086 | 4.1:+4231664 | MS.gene048963:CDS |
| CTCTTGAAGAAGCTGCAGAT+CGG | 0.571252 | 4.1:+4231067 | MS.gene048963:CDS |
| TTCAACGGCGCAGCGTTCGA+AGG | 0.574087 | 4.1:-4230653 | None:intergenic |
| CCTTGTCATCAAGATACTCT+CGG | 0.579132 | 4.1:+4231810 | MS.gene048963:CDS |
| ACAAGAGGTGGCCTGGTTTG+GGG | 0.579756 | 4.1:+4232517 | MS.gene048963:CDS |
| GTTTCGGGTAAGGAGATTCG+GGG | 0.581165 | 4.1:-4230376 | None:intergenic |
| GGCGAGGACATGGAGGCTCA+TGG | 0.583135 | 4.1:-4230698 | None:intergenic |
| AAATTCAAAGAGGACAAAGA+AGG | 0.585661 | 4.1:+4232488 | MS.gene048963:CDS |
| GGCTTCGGAGAGGAGAGAGT+TGG | 0.588584 | 4.1:-4230518 | None:intergenic |
| TAAATTCTAAACCCCAAACC+AGG | 0.601983 | 4.1:-4232528 | None:intergenic |
| GAAGGCAATGAAATTGTTGG+AGG | 0.603285 | 4.1:+4231527 | MS.gene048963:CDS |
| TGGGGATACAAGACCAGGCA+TGG | 0.605802 | 4.1:-4230341 | None:intergenic |
| CCGAGAGTATCTTGATGACA+AGG | 0.605990 | 4.1:-4231810 | None:intergenic |
| TTTCAACACAGCACTCTCAA+AGG | 0.608981 | 4.1:-4231643 | None:intergenic |
| GGATTCGGATCTTTGAGTAG+GGG | 0.610218 | 4.1:-4230398 | None:intergenic |
| AGGTGATTATGAATCGGCGT+TGG | 0.611553 | 4.1:+4231119 | MS.gene048963:CDS |
| AAATTGAGGGAAGAGAAGCT+TGG | 0.612289 | 4.1:+4232354 | MS.gene048963:CDS |
| TTGGAGCGTGAAGAAGGAGA+GGG | 0.613060 | 4.1:-4230469 | None:intergenic |
| GGAATTCTTGAACAAGAATG+TGG | 0.615719 | 4.1:+4231786 | MS.gene048963:CDS |
| ACTTATGGCGTTGATTTGTG+AGG | 0.616428 | 4.1:+4231092 | MS.gene048963:CDS |
| AGAAGGAGAGTAACAAGAGG+TGG | 0.616790 | 4.1:+4232505 | MS.gene048963:CDS |
| ACAAACACCGAAGCAACAGA+AGG | 0.618356 | 4.1:-4231315 | None:intergenic |
| GGTTTCACCGACGCGTGGAT+CGG | 0.621169 | 4.1:-4230938 | None:intergenic |
| GAGTGATGTATTATATGATT+GGG | 0.621428 | 4.1:+4231598 | MS.gene048963:CDS |
| ACGGTGTTTAAGTCGTCCAA+AGG | 0.621832 | 4.1:+4231282 | MS.gene048963:CDS |
| AAATTGTTGGAGGATAAACC+TGG | 0.621852 | 4.1:+4231537 | MS.gene048963:CDS |
| TGAATCTGTTGATGATCCAG+AGG | 0.624576 | 4.1:+4231485 | MS.gene048963:CDS |
| TCTCTCGATAACCCAGATCT+CGG | 0.624925 | 4.1:+4230541 | MS.gene048963:CDS |
| TGGACAGCAGAGTACAGTTG+CGG | 0.633649 | 4.1:+4231557 | MS.gene048963:CDS |
| GATTGCTGGTGGTTTGACCG+AGG | 0.633667 | 4.1:+4231449 | MS.gene048963:CDS |
| GAGATCTGGGTTATCGAGAG+AGG | 0.635357 | 4.1:-4230539 | None:intergenic |
| AACCTGTCGCTATTTGGCGG+AGG | 0.638321 | 4.1:+4230957 | MS.gene048963:CDS |
| TTATTGATCCAAATTCAAAG+AGG | 0.640431 | 4.1:+4232478 | MS.gene048963:CDS |
| TGTCGCGGGCTACTTTGAGA+AGG | 0.646398 | 4.1:-4230570 | None:intergenic |
| CCTGGTCTTGTATCCCCAGG+TGG | 0.646721 | 4.1:+4230346 | MS.gene048963:CDS |
| ATCTGTTGATGATCCAGAGG+AGG | 0.649836 | 4.1:+4231488 | MS.gene048963:CDS |
| TCGGGGCGGAGGTCCACCTG+GGG | 0.650423 | 4.1:-4230359 | None:intergenic |
| CAGTTGCGGGGATAGAAGCA+CGG | 0.652386 | 4.1:+4231571 | MS.gene048963:CDS |
| CGACAGGTTTCACCGACGCG+TGG | 0.652996 | 4.1:-4230943 | None:intergenic |
| GGACATGGAGGCTCATGGCG+AGG | 0.654929 | 4.1:-4230693 | None:intergenic |
| CTACTTACGATGCAATGGGA+AGG | 0.657643 | 4.1:+4231853 | MS.gene048963:CDS |
| GCGGGGATAGAAGCACGGAT+GGG | 0.658266 | 4.1:+4231576 | MS.gene048963:CDS |
| ATGTGCACGATGAATCTCCA+AGG | 0.659328 | 4.1:-4231031 | None:intergenic |
| GATGCAGTTTGATAAAGCAG+AGG | 0.659355 | 4.1:+4230993 | MS.gene048963:CDS |
| GTGTTGAAACTGAGAACCAG+TGG | 0.668236 | 4.1:+4231657 | MS.gene048963:CDS |
| TATCGAGAGAGGCTTCGGAG+AGG | 0.675847 | 4.1:-4230528 | None:intergenic |
| CATGTTCCTGATGTTGAGCG+TGG | 0.676143 | 4.1:+4230781 | MS.gene048963:CDS |
| GTTCGAAGGATTTGGAAGCG+CGG | 0.680525 | 4.1:-4230639 | None:intergenic |
| GACAGCAGAGTACAGTTGCG+GGG | 0.681755 | 4.1:+4231559 | MS.gene048963:CDS |
| ACTGCAGAGGAGATTGCTGG+TGG | 0.682977 | 4.1:+4231438 | MS.gene048963:CDS |
| GGTTCCTGGAACTACTGCAG+AGG | 0.683112 | 4.1:+4231425 | MS.gene048963:CDS |
| AGTATGGCAATGATCGCCAA+CGG | 0.686660 | 4.1:+4231159 | MS.gene048963:CDS |
| TGTTGAAACTGAGAACCAGT+GGG | 0.688448 | 4.1:+4231658 | MS.gene048963:CDS |
| AAATCGCGGCGAGGACATGG+AGG | 0.690731 | 4.1:-4230705 | None:intergenic |
| CAAAGAAGGAGAGTAACAAG+AGG | 0.698382 | 4.1:+4232502 | MS.gene048963:CDS |
| GGTGATACCGATCCACGCGT+CGG | 0.708941 | 4.1:+4230931 | MS.gene048963:CDS |
| AGCTACAGTAAATCGCGGCG+AGG | 0.710117 | 4.1:-4230714 | None:intergenic |
| TATGATTGGGAAGTACGATG+AGG | 0.711774 | 4.1:+4231611 | MS.gene048963:CDS |
| GTTTAAGCTACAGTAAATCG+CGG | 0.716838 | 4.1:-4230719 | None:intergenic |
| GCGTTGATTTGTGAGGCGAA+AGG | 0.719934 | 4.1:+4231099 | MS.gene048963:CDS |
| GAATTGTTTGAGGAAGCTAG+GGG | 0.741462 | 4.1:+4231765 | MS.gene048963:CDS |
| GTTGAAACTGAGAACCAGTG+GGG | 0.823327 | 4.1:+4231659 | MS.gene048963:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATAGCTTCATCAAAA+CGG | - | chr4.1:4231245-4231264 | None:intergenic | 20.0% |
| !! | AAGATTGTTAAAAAGAGAAA+GGG | - | chr4.1:4231891-4231910 | None:intergenic | 20.0% |
| !! | TAAGATTGTTAAAAAGAGAA+AGG | - | chr4.1:4231892-4231911 | None:intergenic | 20.0% |
| ! | ACTAAATTGTTTATCCAAAC+CGG | - | chr4.1:4231935-4231954 | None:intergenic | 25.0% |
| ! | ATAAACAAGACCTTATCTTA+GGG | - | chr4.1:4231978-4231997 | None:intergenic | 25.0% |
| ! | GAGTGATGTATTATATGATT+GGG | + | chr4.1:4231598-4231617 | MS.gene048963:CDS | 25.0% |
| ! | TATAAACAAGACCTTATCTT+AGG | - | chr4.1:4231979-4231998 | None:intergenic | 25.0% |
| ! | TCCTTGATCATACATTAAAA+TGG | - | chr4.1:4230887-4230906 | None:intergenic | 25.0% |
| ! | TTATTGATCCAAATTCAAAG+AGG | + | chr4.1:4232478-4232497 | MS.gene048963:CDS | 25.0% |
| ! | TTTATAACAAGTGCATAAGT+TGG | - | chr4.1:4232159-4232178 | None:intergenic | 25.0% |
| !!! | TCCATTTTAATGTATGATCA+AGG | + | chr4.1:4230883-4230902 | MS.gene048963:CDS | 25.0% |
| AAATTCAAAGAGGACAAAGA+AGG | + | chr4.1:4232488-4232507 | MS.gene048963:CDS | 30.0% | |
| AGAATATGTGCTGAAATTGA+GGG | + | chr4.1:4232341-4232360 | MS.gene048963:CDS | 30.0% | |
| ATTTCCAATACTCACATCAA+TGG | - | chr4.1:4231205-4231224 | None:intergenic | 30.0% | |
| CTAAATTGTTTATCCAAACC+GGG | - | chr4.1:4231934-4231953 | None:intergenic | 30.0% | |
| GGAGTGATGTATTATATGAT+TGG | + | chr4.1:4231597-4231616 | MS.gene048963:CDS | 30.0% | |
| GTTTGATTCAATATTATGCC+CGG | + | chr4.1:4231913-4231932 | MS.gene048963:intron | 30.0% | |
| TAAACAAGACCTTATCTTAG+GGG | - | chr4.1:4231977-4231996 | None:intergenic | 30.0% | |
| TAGAATATGTGCTGAAATTG+AGG | + | chr4.1:4232340-4232359 | MS.gene048963:CDS | 30.0% | |
| TTCTTTGTCCTCTTTGAATT+TGG | - | chr4.1:4232489-4232508 | None:intergenic | 30.0% | |
| !! | GTTTAGCTGATTTGTATCAT+AGG | + | chr4.1:4231340-4231359 | MS.gene048963:CDS | 30.0% |
| !!! | GAAAGGAAATCTGCATTTTT+TGG | + | chr4.1:4231681-4231700 | MS.gene048963:CDS | 30.0% |
| AAATTGTTGGAGGATAAACC+TGG | + | chr4.1:4231537-4231556 | MS.gene048963:CDS | 35.0% | |
| AACTTCATTATCTTGACCGT+TGG | - | chr4.1:4231178-4231197 | None:intergenic | 35.0% | |
| AAGCACTAGTGAAATTCTTC+AGG | - | chr4.1:4232200-4232219 | None:intergenic | 35.0% | |
| AGACAGAAAAGCAAAGTCTT+TGG | + | chr4.1:4232449-4232468 | MS.gene048963:CDS | 35.0% | |
| AGCACTAGTGAAATTCTTCA+GGG | - | chr4.1:4232199-4232218 | None:intergenic | 35.0% | |
| ATTCAATATTATGCCCGGTT+TGG | + | chr4.1:4231918-4231937 | MS.gene048963:intron | 35.0% | |
| ATTTCACTAGTGCTTATGTG+TGG | + | chr4.1:4232205-4232224 | MS.gene048963:intron | 35.0% | |
| CAAATTCAGATCCAAACGTT+AGG | + | chr4.1:4230910-4230929 | MS.gene048963:CDS | 35.0% | |
| GGAATTCTTGAACAAGAATG+TGG | + | chr4.1:4231786-4231805 | MS.gene048963:CDS | 35.0% | |
| GTGATGATATGATTCAGAGT+TGG | + | chr4.1:4232300-4232319 | MS.gene048963:intron | 35.0% | |
| GTTTAAGCTACAGTAAATCG+CGG | - | chr4.1:4230722-4230741 | None:intergenic | 35.0% | |
| TAAATTCTAAACCCCAAACC+AGG | - | chr4.1:4232531-4232550 | None:intergenic | 35.0% | |
| TAGTATAAGCCCCTAAGATA+AGG | + | chr4.1:4231965-4231984 | MS.gene048963:intron | 35.0% | |
| TCTTAGAATTTACTCGAAGC+CGG | + | chr4.1:4231404-4231423 | MS.gene048963:CDS | 35.0% | |
| TGAATTGTTTGAGGAAGCTA+GGG | + | chr4.1:4231764-4231783 | MS.gene048963:CDS | 35.0% | |
| TTCAAATATCGCTGAAACCT+CGG | - | chr4.1:4231469-4231488 | None:intergenic | 35.0% | |
| ! | AAATCATCCTTCTGTTGCTT+CGG | + | chr4.1:4231308-4231327 | MS.gene048963:CDS | 35.0% |
| ! | AGAAGGATGATTTTCACCTT+TGG | - | chr4.1:4231301-4231320 | None:intergenic | 35.0% |
| ! | CTGATTTGTATCATAGGACA+GGG | + | chr4.1:4231346-4231365 | MS.gene048963:CDS | 35.0% |
| !! | TGTTTTGAATCAGATGGGAT+TGG | + | chr4.1:4231707-4231726 | MS.gene048963:CDS | 35.0% |
| !! | TTCTTATCAGAAAGCGCTTA+CGG | + | chr4.1:4231263-4231282 | MS.gene048963:CDS | 35.0% |
| !!! | GGTGTTGTTTTGAATCAGAT+GGG | + | chr4.1:4231702-4231721 | MS.gene048963:CDS | 35.0% |
| !!! | TGGTGTTGTTTTGAATCAGA+TGG | + | chr4.1:4231701-4231720 | MS.gene048963:CDS | 35.0% |
| AAATTGAGGGAAGAGAAGCT+TGG | + | chr4.1:4232354-4232373 | MS.gene048963:CDS | 40.0% | |
| AGGATTCGGATCTTTGAGTA+GGG | - | chr4.1:4230402-4230421 | None:intergenic | 40.0% | |
| CAAAGAAGGAGAGTAACAAG+AGG | + | chr4.1:4232502-4232521 | MS.gene048963:CDS | 40.0% | |
| CCTTGTCATCAAGATACTCT+CGG | + | chr4.1:4231810-4231829 | MS.gene048963:CDS | 40.0% | |
| CGCTTCTCATCTTCAAAATC+AGG | - | chr4.1:4232390-4232409 | None:intergenic | 40.0% | |
| CTGAATTGTTTGAGGAAGCT+AGG | + | chr4.1:4231763-4231782 | MS.gene048963:CDS | 40.0% | |
| GAAGGCAATGAAATTGTTGG+AGG | + | chr4.1:4231527-4231546 | MS.gene048963:CDS | 40.0% | |
| GAATTGTTTGAGGAAGCTAG+GGG | + | chr4.1:4231765-4231784 | MS.gene048963:CDS | 40.0% | |
| GATGCAGTTTGATAAAGCAG+AGG | + | chr4.1:4230993-4231012 | MS.gene048963:CDS | 40.0% | |
| GCAGAAGGCAATGAAATTGT+TGG | + | chr4.1:4231524-4231543 | MS.gene048963:CDS | 40.0% | |
| GCTTCCATTGATGTGAGTAT+TGG | + | chr4.1:4231198-4231217 | MS.gene048963:CDS | 40.0% | |
| GGCGAAAGGTGATTATGAAT+CGG | + | chr4.1:4231113-4231132 | MS.gene048963:CDS | 40.0% | |
| GTCACCTAACTGCATATAAC+CGG | - | chr4.1:4230833-4230852 | None:intergenic | 40.0% | |
| TGAAGCTGCTGAATTGTTTG+AGG | + | chr4.1:4231755-4231774 | MS.gene048963:CDS | 40.0% | |
| TGTTGAAACTGAGAACCAGT+GGG | + | chr4.1:4231658-4231677 | MS.gene048963:CDS | 40.0% | |
| TTCTCCGGTTATATGCAGTT+AGG | + | chr4.1:4230826-4230845 | MS.gene048963:CDS | 40.0% | |
| TTTCAACACAGCACTCTCAA+AGG | - | chr4.1:4231646-4231665 | None:intergenic | 40.0% | |
| ! | GGAGCTTTGTAACAAAACCT+TGG | + | chr4.1:4231014-4231033 | MS.gene048963:CDS | 40.0% |
| ! | TATGATTGGGAAGTACGATG+AGG | + | chr4.1:4231611-4231630 | MS.gene048963:CDS | 40.0% |
| ! | TTTTTCTTGGAGCGTGAAGA+AGG | - | chr4.1:4230478-4230497 | None:intergenic | 40.0% |
| !! | ACTTATGGCGTTGATTTGTG+AGG | + | chr4.1:4231092-4231111 | MS.gene048963:CDS | 40.0% |
| !! | GCTGATTTGTATCATAGGAC+AGG | + | chr4.1:4231345-4231364 | MS.gene048963:CDS | 40.0% |
| !! | TGAATCTGTTGATGATCCAG+AGG | + | chr4.1:4231485-4231504 | MS.gene048963:CDS | 40.0% |
| !!! | GAGAGGGTGGTTTTTTGTTA+GGG | - | chr4.1:4230450-4230469 | None:intergenic | 40.0% |
| !!! | GGTGACACTTTTTCGATGTT+AGG | + | chr4.1:4230847-4230866 | MS.gene048963:CDS | 40.0% |
| !!! | GGTTTCGGGTGTTTTTTTCT+TGG | - | chr4.1:4230491-4230510 | None:intergenic | 40.0% |
| ACAAACACCGAAGCAACAGA+AGG | - | chr4.1:4231318-4231337 | None:intergenic | 45.0% | |
| ACGGTGTTTAAGTCGTCCAA+AGG | + | chr4.1:4231282-4231301 | MS.gene048963:CDS | 45.0% | |
| AGAAGGAGAGTAACAAGAGG+TGG | + | chr4.1:4232505-4232524 | MS.gene048963:CDS | 45.0% | |
| AGGTGATTATGAATCGGCGT+TGG | + | chr4.1:4231119-4231138 | MS.gene048963:CDS | 45.0% | |
| AGTATGGCAATGATCGCCAA+CGG | + | chr4.1:4231159-4231178 | MS.gene048963:CDS | 45.0% | |
| ATGTGCACGATGAATCTCCA+AGG | - | chr4.1:4231034-4231053 | None:intergenic | 45.0% | |
| CAGGAACAGCTTCTTCGAAT+CGG | - | chr4.1:4230744-4230763 | None:intergenic | 45.0% | |
| CTACTTACGATGCAATGGGA+AGG | + | chr4.1:4231853-4231872 | MS.gene048963:CDS | 45.0% | |
| CTCTTGAAGAAGCTGCAGAT+CGG | + | chr4.1:4231067-4231086 | MS.gene048963:CDS | 45.0% | |
| GAGGATTCGGATCTTTGAGT+AGG | - | chr4.1:4230403-4230422 | None:intergenic | 45.0% | |
| GATCGGTATCACCTAACGTT+TGG | - | chr4.1:4230924-4230943 | None:intergenic | 45.0% | |
| GATCTTTGAGTAGGGGTTTC+GGG | - | chr4.1:4230394-4230413 | None:intergenic | 45.0% | |
| GCAGCTACTTACGATGCAAT+GGG | + | chr4.1:4231849-4231868 | MS.gene048963:CDS | 45.0% | |
| GGATCTTTGAGTAGGGGTTT+CGG | - | chr4.1:4230395-4230414 | None:intergenic | 45.0% | |
| GGATTCGGATCTTTGAGTAG+GGG | - | chr4.1:4230401-4230420 | None:intergenic | 45.0% | |
| GTGTTGAAACTGAGAACCAG+TGG | + | chr4.1:4231657-4231676 | MS.gene048963:CDS | 45.0% | |
| GTTGAAACTGAGAACCAGTG+GGG | + | chr4.1:4231659-4231678 | MS.gene048963:CDS | 45.0% | |
| TCTCTCGATAACCCAGATCT+CGG | + | chr4.1:4230541-4230560 | MS.gene048963:CDS | 45.0% | |
| TGAAACCTGTCGCTATTTGG+CGG | + | chr4.1:4230954-4230973 | MS.gene048963:CDS | 45.0% | |
| TGCAGCTACTTACGATGCAA+TGG | + | chr4.1:4231848-4231867 | MS.gene048963:CDS | 45.0% | |
| TTTGTTAGGGAGGGGTGATT+GGG | - | chr4.1:4230437-4230456 | None:intergenic | 45.0% | |
| ! | GAAAGCAGCAAGAGCATGAT+CGG | - | chr4.1:4230809-4230828 | None:intergenic | 45.0% |
| ! | TTTTGTTAGGGAGGGGTGAT+TGG | - | chr4.1:4230438-4230457 | None:intergenic | 45.0% |
| !! | ATCTGTTGATGATCCAGAGG+AGG | + | chr4.1:4231488-4231507 | MS.gene048963:CDS | 45.0% |
| !! | CCGAGAGTATCTTGATGACA+AGG | - | chr4.1:4231813-4231832 | None:intergenic | 45.0% |
| !!! | AGGGTGGTTTTTTGTTAGGG+AGG | - | chr4.1:4230447-4230466 | None:intergenic | 45.0% |
| !!! | GGAGAGGGTGGTTTTTTGTT+AGG | - | chr4.1:4230451-4230470 | None:intergenic | 45.0% |
| !!! | GGGTGGTTTTTTGTTAGGGA+GGG | - | chr4.1:4230446-4230465 | None:intergenic | 45.0% |
| !!! | GGTGGTTTTTTGTTAGGGAG+GGG | - | chr4.1:4230445-4230464 | None:intergenic | 45.0% |
| !!! | GGTTGGTGTTTTGGAGGATT+CGG | - | chr4.1:4230416-4230435 | None:intergenic | 45.0% |
| !!! | TGATTGGGTTGGTGTTTTGG+AGG | - | chr4.1:4230422-4230441 | None:intergenic | 45.0% |
| AAAAGCTTCAACGCCTCCTC+TGG | - | chr4.1:4231504-4231523 | None:intergenic | 50.0% | |
| AACAAGAGGTGGCCTGGTTT+GGG | + | chr4.1:4232516-4232535 | MS.gene048963:CDS | 50.0% | |
| AACTGAGAACCAGTGGGGAA+AGG | + | chr4.1:4231664-4231683 | MS.gene048963:CDS | 50.0% | |
| ACTACTGCAGAGGAGATTGC+TGG | + | chr4.1:4231435-4231454 | MS.gene048963:CDS | 50.0% | |
| AGAAGGAATGGACCGAGATC+TGG | - | chr4.1:4230556-4230575 | None:intergenic | 50.0% | |
| AGCTGCAGATCGGAGACTTA+TGG | + | chr4.1:4231077-4231096 | MS.gene048963:CDS | 50.0% | |
| ATCTCCTCTGCAGTAGTTCC+AGG | - | chr4.1:4231432-4231451 | None:intergenic | 50.0% | |
| CACGCTCAACATCAGGAACA+TGG | - | chr4.1:4230783-4230802 | None:intergenic | 50.0% | |
| CATGTTCCTGATGTTGAGCG+TGG | + | chr4.1:4230781-4230800 | MS.gene048963:CDS | 50.0% | |
| CGGTGAAACCTGTCGCTATT+TGG | + | chr4.1:4230951-4230970 | MS.gene048963:CDS | 50.0% | |
| GAAGGAATGGACCGAGATCT+GGG | - | chr4.1:4230555-4230574 | None:intergenic | 50.0% | |
| GAGACTGGGTTCACCTTCAA+CGG | - | chr4.1:4230671-4230690 | None:intergenic | 50.0% | |
| GAGATCTGGGTTATCGAGAG+AGG | - | chr4.1:4230542-4230561 | None:intergenic | 50.0% | |
| GATGGCATAGTCGAGTGCTT+TGG | - | chr4.1:4230620-4230639 | None:intergenic | 50.0% | |
| GCAGCTTCTTCAAGAGAAGC+AGG | - | chr4.1:4231063-4231082 | None:intergenic | 50.0% | |
| GCATCTTGTTCTGGCGAGTA+TGG | + | chr4.1:4231143-4231162 | MS.gene048963:CDS | 50.0% | |
| GCTGAGTTGCTGAAAGAAGC+TGG | + | chr4.1:4232417-4232436 | MS.gene048963:CDS | 50.0% | |
| GTTCGAAGGATTTGGAAGCG+CGG | - | chr4.1:4230642-4230661 | None:intergenic | 50.0% | |
| TAACAAGAGGTGGCCTGGTT+TGG | + | chr4.1:4232515-4232534 | MS.gene048963:CDS | 50.0% | |
| TCTGCAGTAGTTCCAGGAAC+CGG | - | chr4.1:4231426-4231445 | None:intergenic | 50.0% | |
| TGCAGATTTCCTTTCCCCAC+TGG | - | chr4.1:4231676-4231695 | None:intergenic | 50.0% | |
| TGGACAGCAGAGTACAGTTG+CGG | + | chr4.1:4231557-4231576 | MS.gene048963:CDS | 50.0% | |
| TGGGTTATCGAGAGAGGCTT+CGG | - | chr4.1:4230536-4230555 | None:intergenic | 50.0% | |
| TTGGAGCGTGAAGAAGGAGA+GGG | - | chr4.1:4230472-4230491 | None:intergenic | 50.0% | |
| ! | ATTTACTCGAAGCCGGTTCC+TGG | + | chr4.1:4231411-4231430 | MS.gene048963:CDS | 50.0% |
| ! | CGGGCTACTTTGAGAAGGAA+TGG | - | chr4.1:4230568-4230587 | None:intergenic | 50.0% |
| ! | GGGTTTCGGGTAAGGAGATT+CGG | - | chr4.1:4230381-4230400 | None:intergenic | 50.0% |
| ! | GGTTTCGGGTAAGGAGATTC+GGG | - | chr4.1:4230380-4230399 | None:intergenic | 50.0% |
| ! | GTTTCGGGTAAGGAGATTCG+GGG | - | chr4.1:4230379-4230398 | None:intergenic | 50.0% |
| ! | TTGAGTAGGGGTTTCGGGTA+AGG | - | chr4.1:4230389-4230408 | None:intergenic | 50.0% |
| !! | AGAGGAGAGAGTTGGTGGTT+GGG | - | chr4.1:4230513-4230532 | None:intergenic | 50.0% |
| !! | AGAGTTGGTGGTTGGGGTTT+CGG | - | chr4.1:4230506-4230525 | None:intergenic | 50.0% |
| !! | CATGCTCTTGCTGCTTTCTC+CGG | + | chr4.1:4230811-4230830 | MS.gene048963:CDS | 50.0% |
| !! | GCGTTGATTTGTGAGGCGAA+AGG | + | chr4.1:4231099-4231118 | MS.gene048963:CDS | 50.0% |
| !! | GGCGTTGAAGCTTTTGCAGA+AGG | + | chr4.1:4231509-4231528 | MS.gene048963:CDS | 50.0% |
| !!! | GGGTGATTGGGTTGGTGTTT+TGG | - | chr4.1:4230425-4230444 | None:intergenic | 50.0% |
| AACCTGTCGCTATTTGGCGG+AGG | + | chr4.1:4230957-4230976 | MS.gene048963:CDS | 55.0% | |
| ACACTATCGCTTCCGGCGAT+GGG | + | chr4.1:4230590-4230609 | MS.gene048963:CDS | 55.0% | |
| ACTGCAGAGGAGATTGCTGG+TGG | + | chr4.1:4231438-4231457 | MS.gene048963:CDS | 55.0% | |
| AGCTACAGTAAATCGCGGCG+AGG | - | chr4.1:4230717-4230736 | None:intergenic | 55.0% | |
| AGTAAATCGCGGCGAGGACA+TGG | - | chr4.1:4230711-4230730 | None:intergenic | 55.0% | |
| CAGTTGCGGGGATAGAAGCA+CGG | + | chr4.1:4231571-4231590 | MS.gene048963:CDS | 55.0% | |
| CGTGAAGAAGGAGAGGGAGA+GGG | - | chr4.1:4230466-4230485 | None:intergenic | 55.0% | |
| CTTGGAGCGTGAAGAAGGAG+AGG | - | chr4.1:4230473-4230492 | None:intergenic | 55.0% | |
| GACAGCAGAGTACAGTTGCG+GGG | + | chr4.1:4231559-4231578 | MS.gene048963:CDS | 55.0% | |
| GAGAGTAACAAGAGGTGGCC+TGG | + | chr4.1:4232510-4232529 | MS.gene048963:CDS | 55.0% | |
| GATTGCTGGTGGTTTGACCG+AGG | + | chr4.1:4231449-4231468 | MS.gene048963:CDS | 55.0% | |
| GCAACTGTACTCTGCTGTCC+AGG | - | chr4.1:4231558-4231577 | None:intergenic | 55.0% | |
| GCATAGTCGAGTGCTTTGGC+GGG | - | chr4.1:4230616-4230635 | None:intergenic | 55.0% | |
| GGACAGCAGAGTACAGTTGC+GGG | + | chr4.1:4231558-4231577 | MS.gene048963:CDS | 55.0% | |
| GGCATAGTCGAGTGCTTTGG+CGG | - | chr4.1:4230617-4230636 | None:intergenic | 55.0% | |
| GGTTCCTGGAACTACTGCAG+AGG | + | chr4.1:4231425-4231444 | MS.gene048963:CDS | 55.0% | |
| TATCGAGAGAGGCTTCGGAG+AGG | - | chr4.1:4230531-4230550 | None:intergenic | 55.0% | |
| TTAGGGAGGGGTGATTGGGT+TGG | - | chr4.1:4230433-4230452 | None:intergenic | 55.0% | |
| TTCGGAGAGGAGAGAGTTGG+TGG | - | chr4.1:4230518-4230537 | None:intergenic | 55.0% | |
| TTTGGCGGAGGCGAATGTTC+AGG | + | chr4.1:4230969-4230988 | MS.gene048963:CDS | 55.0% | |
| ! | ACAAGAGGTGGCCTGGTTTG+GGG | + | chr4.1:4232517-4232536 | MS.gene048963:CDS | 55.0% |
| ! | GAAGGATTTGGAAGCGCGGA+TGG | - | chr4.1:4230638-4230657 | None:intergenic | 55.0% |
| ! | GGCGTTGGAGCATCTTGTTC+TGG | + | chr4.1:4231134-4231153 | MS.gene048963:CDS | 55.0% |
| ! | TGTCGCGGGCTACTTTGAGA+AGG | - | chr4.1:4230573-4230592 | None:intergenic | 55.0% |
| !! | ATGCCTGGTCTTGTATCCCC+AGG | + | chr4.1:4230343-4230362 | MS.gene048963:CDS | 55.0% |
| !! | GAGAGGAGAGAGTTGGTGGT+TGG | - | chr4.1:4230514-4230533 | None:intergenic | 55.0% |
| !! | GAGGAGAGAGTTGGTGGTTG+GGG | - | chr4.1:4230512-4230531 | None:intergenic | 55.0% |
| !! | GAGTTGGTGGTTGGGGTTTC+GGG | - | chr4.1:4230505-4230524 | None:intergenic | 55.0% |
| AAATCGCGGCGAGGACATGG+AGG | - | chr4.1:4230708-4230727 | None:intergenic | 60.0% | |
| CCACCTGGGGATACAAGACC+AGG | - | chr4.1:4230349-4230368 | None:intergenic | 60.0% | |
| CTCATGGCGAGGTCGAGACT+GGG | - | chr4.1:4230685-4230704 | None:intergenic | 60.0% | |
| GAAGAAGGAGAGGGAGAGGG+TGG | - | chr4.1:4230463-4230482 | None:intergenic | 60.0% | |
| GACACTATCGCTTCCGGCGA+TGG | + | chr4.1:4230589-4230608 | MS.gene048963:CDS | 60.0% | |
| GCGTGAAGAAGGAGAGGGAG+AGG | - | chr4.1:4230467-4230486 | None:intergenic | 60.0% | |
| GGCGCAGCGTTCGAAGGATT+TGG | - | chr4.1:4230650-4230669 | None:intergenic | 60.0% | |
| GGCTTCGGAGAGGAGAGAGT+TGG | - | chr4.1:4230521-4230540 | None:intergenic | 60.0% | |
| GGTGATACCGATCCACGCGT+CGG | + | chr4.1:4230931-4230950 | MS.gene048963:CDS | 60.0% | |
| GGTTTCACCGACGCGTGGAT+CGG | - | chr4.1:4230941-4230960 | None:intergenic | 60.0% | |
| TCGGCACCACGCTCAACATC+AGG | - | chr4.1:4230790-4230809 | None:intergenic | 60.0% | |
| TCGGGTAAGGAGATTCGGGG+CGG | - | chr4.1:4230376-4230395 | None:intergenic | 60.0% | |
| TGGATCGCGCGTTCGAGAAC+AGG | - | chr4.1:4230763-4230782 | None:intergenic | 60.0% | |
| TTCAACGGCGCAGCGTTCGA+AGG | - | chr4.1:4230656-4230675 | None:intergenic | 60.0% | |
| TTCGAACGCTGCGCCGTTGA+AGG | + | chr4.1:4230655-4230674 | MS.gene048963:CDS | 60.0% | |
| ! | GCGGGGATAGAAGCACGGAT+GGG | + | chr4.1:4231576-4231595 | MS.gene048963:CDS | 60.0% |
| ! | TGCGGGGATAGAAGCACGGA+TGG | + | chr4.1:4231575-4231594 | MS.gene048963:CDS | 60.0% |
| !! | CCTGGTCTTGTATCCCCAGG+TGG | + | chr4.1:4230346-4230365 | MS.gene048963:CDS | 60.0% |
| CGACAGGTTTCACCGACGCG+TGG | - | chr4.1:4230946-4230965 | None:intergenic | 65.0% | |
| CGCCGGAAGCGATAGTGTCG+CGG | - | chr4.1:4230588-4230607 | None:intergenic | 65.0% | |
| CGCCTCCGCCAAATAGCGAC+AGG | - | chr4.1:4230962-4230981 | None:intergenic | 65.0% | |
| GCCCGCGACACTATCGCTTC+CGG | + | chr4.1:4230583-4230602 | MS.gene048963:CDS | 65.0% | |
| GCCGGAAGCGATAGTGTCGC+GGG | - | chr4.1:4230587-4230606 | None:intergenic | 65.0% | |
| GCTCATGGCGAGGTCGAGAC+TGG | - | chr4.1:4230686-4230705 | None:intergenic | 65.0% | |
| GGACATGGAGGCTCATGGCG+AGG | - | chr4.1:4230696-4230715 | None:intergenic | 65.0% | |
| GGCGAGGACATGGAGGCTCA+TGG | - | chr4.1:4230701-4230720 | None:intergenic | 65.0% | |
| GGTAAGGAGATTCGGGGCGG+AGG | - | chr4.1:4230373-4230392 | None:intergenic | 65.0% | |
| ATTCGGGGCGGAGGTCCACC+TGG | - | chr4.1:4230364-4230383 | None:intergenic | 70.0% | |
| TTCGGGGCGGAGGTCCACCT+GGG | - | chr4.1:4230363-4230382 | None:intergenic | 70.0% | |
| ! | TGCTTTGGCGGGCCCATCGC+CGG | - | chr4.1:4230605-4230624 | None:intergenic | 70.0% |
| TCGGGGCGGAGGTCCACCTG+GGG | - | chr4.1:4230362-4230381 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 4230343 | 4232551 | 4230343 | ID=MS.gene048963 |
| chr4.1 | mRNA | 4230343 | 4232551 | 4230343 | ID=MS.gene048963.t1;Parent=MS.gene048963 |
| chr4.1 | exon | 4230343 | 4231874 | 4230343 | ID=MS.gene048963.t1.exon1;Parent=MS.gene048963.t1 |
| chr4.1 | CDS | 4230343 | 4231874 | 4230343 | ID=cds.MS.gene048963.t1;Parent=MS.gene048963.t1 |
| chr4.1 | exon | 4232317 | 4232551 | 4232317 | ID=MS.gene048963.t1.exon2;Parent=MS.gene048963.t1 |
| chr4.1 | CDS | 4232317 | 4232551 | 4232317 | ID=cds.MS.gene048963.t1;Parent=MS.gene048963.t1 |
| Gene Sequence |
| Protein sequence |
