Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93780.t1 | XP_003631073.1 | 98.2 | 611 | 11 | 0 | 1 | 611 | 1 | 611 | 0.00E+00 | 1123.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93780.t1 | Q9LV35 | 75.2 | 608 | 150 | 1 | 4 | 610 | 1 | 608 | 2.8e-252 | 872.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93780.t1 | Q1SN19 | 98.2 | 611 | 11 | 0 | 1 | 611 | 1 | 611 | 0.0e+00 | 1123.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene042491 | MS.gene93780 | PPI |
| MS.gene93780 | MS.gene55829 | PPI |
| MS.gene93780 | MS.gene08137 | PPI |
| MS.gene93780 | MS.gene41795 | PPI |
| MS.gene93780 | MS.gene80320 | PPI |
| MS.gene49831 | MS.gene93780 | PPI |
| MS.gene061659 | MS.gene93780 | PPI |
| MS.gene033840 | MS.gene93780 | PPI |
| MS.gene93780 | MS.gene020596 | PPI |
| MS.gene93780 | MS.gene048963 | PPI |
| MS.gene007355 | MS.gene93780 | PPI |
| MS.gene20209 | MS.gene93780 | PPI |
| MS.gene06110 | MS.gene93780 | PPI |
| MS.gene93780 | MS.gene026418 | PPI |
| MS.gene007592 | MS.gene93780 | PPI |
| MS.gene040852 | MS.gene93780 | PPI |
| MS.gene93780 | MS.gene22354 | PPI |
| MS.gene93780 | MS.gene069541 | PPI |
| MS.gene061041 | MS.gene93780 | PPI |
| MS.gene93780 | MS.gene47297 | PPI |
| MS.gene75846 | MS.gene93780 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93780.t1 | MTR_8g106820 | 98.200 | 611 | 11 | 0 | 1 | 611 | 1 | 611 | 0.0 | 1226 |
| MS.gene93780.t1 | MTR_1g107560 | 72.968 | 603 | 163 | 0 | 6 | 608 | 4 | 606 | 0.0 | 930 |
| MS.gene93780.t1 | MTR_1g054300 | 37.273 | 110 | 61 | 3 | 158 | 264 | 337 | 441 | 1.40e-12 | 70.9 |
| MS.gene93780.t1 | MTR_3g449990 | 24.302 | 358 | 216 | 13 | 179 | 531 | 259 | 566 | 1.36e-11 | 67.8 |
| MS.gene93780.t1 | MTR_1g072140 | 22.989 | 348 | 211 | 13 | 179 | 520 | 16 | 312 | 8.97e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93780.t1 | AT3G18060 | 75.000 | 608 | 151 | 1 | 4 | 610 | 1 | 608 | 0.0 | 957 |
| MS.gene93780.t1 | AT2G01330 | 67.323 | 609 | 195 | 4 | 5 | 610 | 3 | 610 | 0.0 | 862 |
| MS.gene93780.t1 | AT5G52820 | 22.738 | 431 | 281 | 13 | 148 | 564 | 80 | 472 | 7.29e-13 | 71.6 |
| MS.gene93780.t1 | AT2G43770 | 26.174 | 298 | 199 | 10 | 58 | 348 | 52 | 335 | 8.73e-12 | 67.4 |
| MS.gene93780.t1 | AT5G67320 | 23.967 | 242 | 161 | 8 | 52 | 284 | 358 | 585 | 2.00e-11 | 67.4 |
| MS.gene93780.t1 | AT4G02730 | 24.138 | 348 | 203 | 12 | 51 | 392 | 35 | 327 | 6.31e-11 | 64.7 |
Find 161 sgRNAs with CRISPR-Local
Find 407 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCACTTAGGTGGGGTTTA+TGG | 0.082114 | 4.1:+653883 | MS.gene93780:CDS |
| AAGGAGTTTCGTGTTCTTTC+TGG | 0.134342 | 4.1:+647831 | MS.gene93780:CDS |
| CTGCACATATATTCTATTTC+TGG | 0.164431 | 4.1:+653236 | MS.gene93780:CDS |
| ACCTAAGTGAGCACCCTTTA+TGG | 0.179066 | 4.1:-653872 | None:intergenic |
| CTCACTTAGGTGGGGTTTAT+GGG | 0.206529 | 4.1:+653884 | MS.gene93780:CDS |
| AACCGTTAGTTCTGACAAAA+AGG | 0.227495 | 4.1:+650507 | MS.gene93780:CDS |
| GTTCTAGTTTCAATTGATTC+AGG | 0.254254 | 4.1:+653095 | MS.gene93780:CDS |
| GCAATGGATAGGTGGGATTC+TGG | 0.264908 | 4.1:+648506 | MS.gene93780:intron |
| GTAGCAATCCTACTGCTATC+AGG | 0.285417 | 4.1:-653787 | None:intergenic |
| CTGACAAGTCTGCAAAAGTA+TGG | 0.313171 | 4.1:+651795 | MS.gene93780:CDS |
| CCCCTTCATGTCTCCGTCTA+TGG | 0.323756 | 4.1:+647690 | MS.gene93780:CDS |
| ACCATCCTGACCACCAATAA+TGG | 0.326504 | 4.1:-653210 | None:intergenic |
| TGTCAGGTACCGTGAGGATC+TGG | 0.337070 | 4.1:+647781 | MS.gene93780:CDS |
| GTTGTGTCAATCATTAATCT+TGG | 0.338589 | 4.1:+653143 | MS.gene93780:CDS |
| GTAGGTGATGGTGTTGGATT+TGG | 0.348835 | 4.1:-647628 | None:intergenic |
| ATTCACTGATGAATATAGTT+TGG | 0.351324 | 4.1:+653912 | MS.gene93780:CDS |
| GAAAATCGAGCGACGGTGGC+AGG | 0.372098 | 4.1:-647726 | None:intergenic |
| CAGCATAAATACTGCCAGTA+TGG | 0.381490 | 4.1:-650588 | None:intergenic |
| GGCTAATAGAAATACCATAA+AGG | 0.390095 | 4.1:+653858 | MS.gene93780:CDS |
| TATCTTGTCACTGTTTCTCT+TGG | 0.401428 | 4.1:+651920 | MS.gene93780:CDS |
| GTTACTTCTGAGAATGGTTA+AGG | 0.405078 | 4.1:-652023 | None:intergenic |
| CTTGTCACTGTTTCTCTTGG+TGG | 0.406048 | 4.1:+651923 | MS.gene93780:CDS |
| GAAGAAGAGATTGTTATGTC+TGG | 0.410474 | 4.1:+652166 | MS.gene93780:CDS |
| TCTTCTGAAGGTGGCCATAC+TGG | 0.414349 | 4.1:+650574 | MS.gene93780:CDS |
| ATTGAAACTAGAACAAGTTC+AGG | 0.414746 | 4.1:-653086 | None:intergenic |
| GCTAATAGAAATACCATAAA+GGG | 0.416716 | 4.1:+653859 | MS.gene93780:CDS |
| TAATCGAGAAGCTGTTGTTT+GGG | 0.419514 | 4.1:+653358 | MS.gene93780:CDS |
| TTAATCGAGAAGCTGTTGTT+TGG | 0.423105 | 4.1:+653357 | MS.gene93780:CDS |
| ACATTGATTTGTTCTGCCTC+TGG | 0.424474 | 4.1:+651854 | MS.gene93780:CDS |
| ACAATGCGAAAAGGCCTTGT+AGG | 0.425304 | 4.1:-648587 | None:intergenic |
| GATGCTGAAGCCATTGATAT+CGG | 0.426975 | 4.1:+653026 | MS.gene93780:CDS |
| CTCCTGTCTTGTAGTTATGA+TGG | 0.428145 | 4.1:+652055 | MS.gene93780:CDS |
| GACAATTTATCCGTGCAGTA+TGG | 0.435214 | 4.1:-653753 | None:intergenic |
| CAATGGATAGGTGGGATTCT+GGG | 0.435336 | 4.1:+648507 | MS.gene93780:intron |
| CTCTTCTTCTGCAGCTGCTA+AGG | 0.435458 | 4.1:-652152 | None:intergenic |
| CTACAAGACAGGAGCACTCT+AGG | 0.437677 | 4.1:-652046 | None:intergenic |
| GATGAGCTCGGTGGAGTTGA+CGG | 0.438057 | 4.1:+647545 | None:intergenic |
| CGAGATTGCTTAAATCTAAA+GGG | 0.439758 | 4.1:-648653 | None:intergenic |
| GGTATCAGAATTGTCGCTTC+TGG | 0.440339 | 4.1:+647885 | MS.gene93780:CDS |
| CACGGATAAATTGTCTTGCT+TGG | 0.442191 | 4.1:+653761 | MS.gene93780:CDS |
| TGAAGCCATTATTGGTGGTC+AGG | 0.444420 | 4.1:+653205 | MS.gene93780:CDS |
| AGTGCAACACTAAAATCCTT+TGG | 0.445789 | 4.1:-653056 | None:intergenic |
| GTTACAAATTTACTGCCATC+TGG | 0.447597 | 4.1:-650487 | None:intergenic |
| GATGGAAGTGAAGCCATTAT+TGG | 0.448281 | 4.1:+653197 | MS.gene93780:CDS |
| TATGTCCTGAAAACGATGTC+GGG | 0.452600 | 4.1:-651985 | None:intergenic |
| TTAATAGTTAAGTGGATTCA+AGG | 0.455728 | 4.1:+652079 | MS.gene93780:CDS |
| TTGTCACTGTTTCTCTTGGT+GGG | 0.456402 | 4.1:+651924 | MS.gene93780:CDS |
| GCGAGATTGCTTAAATCTAA+AGG | 0.459551 | 4.1:-648654 | None:intergenic |
| GTTAAGTGGATTCAAGGGAT+TGG | 0.468346 | 4.1:+652085 | MS.gene93780:CDS |
| GTCAGGTACCGTGAGGATCT+GGG | 0.468616 | 4.1:+647782 | MS.gene93780:CDS |
| GAATATAGTTTGGTTAGCTC+AGG | 0.471315 | 4.1:+653922 | MS.gene93780:CDS |
| ACTAATGTTGGTGAATTTGA+TGG | 0.472283 | 4.1:+648530 | MS.gene93780:CDS |
| CGCCATAGACGGAGACATGA+AGG | 0.472952 | 4.1:-647692 | None:intergenic |
| TAATCTTGGATTTACTGTTA+CGG | 0.474705 | 4.1:+653157 | MS.gene93780:CDS |
| CCACGGCCACGTTCTGTTGA+AGG | 0.475561 | 4.1:-647585 | None:intergenic |
| ATAAGGCGGGTTTCTTTACA+TGG | 0.476069 | 4.1:+652990 | MS.gene93780:CDS |
| GCATCTGTTGTCTCGTCTGA+TGG | 0.480001 | 4.1:+653179 | MS.gene93780:CDS |
| GCAGTATTTATGCTGTTAGC+TGG | 0.481308 | 4.1:+650596 | MS.gene93780:CDS |
| ATCATATTCGATGGAAAGAC+TGG | 0.482024 | 4.1:+650532 | MS.gene93780:CDS |
| GACATATCTGAGGATAATAG+TGG | 0.491671 | 4.1:+651818 | MS.gene93780:CDS |
| TTGATTTGTTCTGCCTCTGG+TGG | 0.491775 | 4.1:+651857 | MS.gene93780:CDS |
| GGAGTTGAAGACATGCTTGT+AGG | 0.493315 | 4.1:+651878 | MS.gene93780:CDS |
| ATTCATCATGATAACCGATC+TGG | 0.494504 | 4.1:-647658 | None:intergenic |
| AGACTGTCCTTGAGAAACAT+AGG | 0.495310 | 4.1:+653276 | MS.gene93780:CDS |
| GTTGCATCTGCTGACGTGTC+AGG | 0.496526 | 4.1:+647765 | MS.gene93780:CDS |
| GCCATTATTGGTGGTCAGGA+TGG | 0.505715 | 4.1:+653209 | MS.gene93780:CDS |
| TCTAGGGTTACTTCTGAGAA+TGG | 0.505822 | 4.1:-652029 | None:intergenic |
| ATGATGGCTTAATAGTTAAG+TGG | 0.506182 | 4.1:+652071 | MS.gene93780:CDS |
| GATGCAACCCATTCACCGTT+GGG | 0.506443 | 4.1:-647750 | None:intergenic |
| ACGTTCTGTTGAAGGCGTGC+AGG | 0.508737 | 4.1:-647577 | None:intergenic |
| CTTGGTCCCCTGATAGCAGT+AGG | 0.509910 | 4.1:+653779 | MS.gene93780:CDS |
| TAGCAATCCTACTGCTATCA+GGG | 0.510406 | 4.1:-653786 | None:intergenic |
| ATGGTATTTCTATTAGCCAC+AGG | 0.512733 | 4.1:-653853 | None:intergenic |
| CATGATAACCGATCTGGCAT+TGG | 0.515012 | 4.1:-647652 | None:intergenic |
| CCACAGGTGACAATGCGAAA+AGG | 0.517474 | 4.1:-648596 | None:intergenic |
| GGCCGTGGTATTCTCATCTC+CGG | 0.518010 | 4.1:+647600 | MS.gene93780:CDS |
| GTCGCTTCTGGTGAAGCTAA+AGG | 0.520427 | 4.1:+647897 | MS.gene93780:CDS |
| TGGTTGACTTCCGATATCAA+TGG | 0.521473 | 4.1:-653036 | None:intergenic |
| GACTGTCCTTGAGAAACATA+GGG | 0.523830 | 4.1:+653277 | MS.gene93780:CDS |
| TAAAGGGTGCTCACTTAGGT+GGG | 0.536033 | 4.1:+653875 | MS.gene93780:CDS |
| TTCTGTCAACTAGATAAGGC+GGG | 0.537021 | 4.1:+652977 | MS.gene93780:intron |
| AGATGCAACCCATTCACCGT+TGG | 0.537671 | 4.1:-647751 | None:intergenic |
| TCTATCTTTCAAGATGAGCT+CGG | 0.538842 | 4.1:+647533 | None:intergenic |
| GAGTTGAAGACATGCTTGTA+GGG | 0.539058 | 4.1:+651879 | MS.gene93780:CDS |
| GCGACAATTCTGATACCATC+AGG | 0.539289 | 4.1:-647879 | None:intergenic |
| GATAGCAGTAGGATTGCTAC+AGG | 0.543234 | 4.1:+653790 | MS.gene93780:CDS |
| TACAAGACAGGAGCACTCTA+GGG | 0.546231 | 4.1:-652045 | None:intergenic |
| TACTCACATCTCGGGAGGCA+CGG | 0.546800 | 4.1:-653382 | None:intergenic |
| GCTGTTAGCTGGAGTCCTGA+TGG | 0.548585 | 4.1:+650607 | MS.gene93780:CDS |
| AGTACTAGTACTCACATCTC+GGG | 0.551436 | 4.1:-653390 | None:intergenic |
| TAGCGGTAAATTACAAAGGA+AGG | 0.551726 | 4.1:+652111 | MS.gene93780:CDS |
| AGCCATCATAACTACAAGAC+AGG | 0.557501 | 4.1:-652057 | None:intergenic |
| GTAAGCATGTTCGCCATAGA+CGG | 0.558880 | 4.1:-647703 | None:intergenic |
| CACCTACACCAATGCCAGAT+CGG | 0.562580 | 4.1:+647644 | MS.gene93780:CDS |
| ACCATAAAGGGTGCTCACTT+AGG | 0.564151 | 4.1:+653871 | MS.gene93780:CDS |
| ATTGGTGTAGGTGATGGTGT+TGG | 0.567354 | 4.1:-647634 | None:intergenic |
| ATAAAGGGTGCTCACTTAGG+TGG | 0.568101 | 4.1:+653874 | MS.gene93780:CDS |
| GGTGTTGGATTTGGAGTCGC+CGG | 0.568267 | 4.1:-647619 | None:intergenic |
| TGGGATTCTGGGACTAATGT+TGG | 0.568712 | 4.1:+648518 | MS.gene93780:CDS |
| TCGCATTGTCACCTGTGGAG+AGG | 0.571600 | 4.1:+648601 | MS.gene93780:CDS |
| TAATAGTTAAGTGGATTCAA+GGG | 0.572072 | 4.1:+652080 | MS.gene93780:CDS |
| ATATGTCCTGAAAACGATGT+CGG | 0.572109 | 4.1:-651986 | None:intergenic |
| CCTTCAACAGAACGTGGCCG+TGG | 0.572710 | 4.1:+647585 | MS.gene93780:CDS |
| CAAGATAATCGTTCAACCAC+AGG | 0.574023 | 4.1:-651904 | None:intergenic |
| GACAAGAAAATCCTCTCCAC+AGG | 0.576600 | 4.1:-648612 | None:intergenic |
| ATCGGTGAGTTATCTTCTGA+AGG | 0.580609 | 4.1:+650562 | MS.gene93780:CDS |
| AACTCAAAACTCGTCTTGAG+TGG | 0.584201 | 4.1:-648553 | None:intergenic |
| GATCTTCAGTGGTCTCCTGA+TGG | 0.585210 | 4.1:+647864 | MS.gene93780:CDS |
| TACAACTTGATCTTCACGGA+GGG | 0.586215 | 4.1:-653978 | None:intergenic |
| ACATGCTTGTAGGGTGCCTG+TGG | 0.597201 | 4.1:+651888 | MS.gene93780:CDS |
| TGACAAGTCTGCAAAAGTAT+GGG | 0.598045 | 4.1:+651796 | MS.gene93780:CDS |
| AGTTTCGTGTTCTTTCTGGA+AGG | 0.598240 | 4.1:+647835 | MS.gene93780:CDS |
| GCCATAGACGGAGACATGAA+GGG | 0.598923 | 4.1:-647691 | None:intergenic |
| AAAATCGAGCGACGGTGGCA+GGG | 0.599251 | 4.1:-647725 | None:intergenic |
| GGAAAGACTGGAGAGAAGAT+CGG | 0.599432 | 4.1:+650544 | MS.gene93780:CDS |
| CTTCTGTCAACTAGATAAGG+CGG | 0.601647 | 4.1:+652976 | MS.gene93780:intron |
| ATCTGAGGATAATAGTGGGA+AGG | 0.606291 | 4.1:+651823 | MS.gene93780:CDS |
| TATTTCTATTAGCCACAGGT+TGG | 0.608800 | 4.1:-653849 | None:intergenic |
| AAAGGGTGCTCACTTAGGTG+GGG | 0.609702 | 4.1:+653876 | MS.gene93780:CDS |
| ACAACTTGATCTTCACGGAG+GGG | 0.609851 | 4.1:-653977 | None:intergenic |
| TAGCACCCCTATGTTTCTCA+AGG | 0.610582 | 4.1:-653283 | None:intergenic |
| AAGGCGGGTTTCTTTACATG+GGG | 0.611641 | 4.1:+652992 | MS.gene93780:CDS |
| TCTGGCATTGGTGTAGGTGA+TGG | 0.618379 | 4.1:-647640 | None:intergenic |
| GATATAGCGGTAAATTACAA+AGG | 0.618475 | 4.1:+652107 | MS.gene93780:CDS |
| TAAGGCGGGTTTCTTTACAT+GGG | 0.618983 | 4.1:+652991 | MS.gene93780:CDS |
| TGTGTGAGATATTCTCCAGA+TGG | 0.622541 | 4.1:+650472 | MS.gene93780:CDS |
| TAGTTTGGTTAGCTCAGGCG+AGG | 0.625931 | 4.1:+653927 | MS.gene93780:CDS |
| GGGTGAAAATCGAGCGACGG+TGG | 0.626749 | 4.1:-647730 | None:intergenic |
| TCAGGTACCGTGAGGATCTG+GGG | 0.627630 | 4.1:+647783 | MS.gene93780:CDS |
| TTAGATTTAAGCAATCTCGC+AGG | 0.628883 | 4.1:+648657 | MS.gene93780:CDS |
| ACTTCTGAGAATGGTTAAGG+AGG | 0.628997 | 4.1:-652020 | None:intergenic |
| GTTGTGCTTATAAACCTACA+AGG | 0.629807 | 4.1:+648573 | MS.gene93780:CDS |
| CCATAGACGGAGACATGAAG+GGG | 0.633505 | 4.1:-647690 | None:intergenic |
| ACATATCTGAGGATAATAGT+GGG | 0.634727 | 4.1:+651819 | MS.gene93780:CDS |
| GAAGGATCGATGATCTTCAG+TGG | 0.639646 | 4.1:+647853 | MS.gene93780:CDS |
| ATACATAAAAGCGCGAACAA+AGG | 0.644313 | 4.1:-647925 | None:intergenic |
| TGATATCGGAAGTCAACCAA+AGG | 0.651151 | 4.1:+653040 | MS.gene93780:CDS |
| ATGTCCTGAAAACGATGTCG+GGG | 0.652427 | 4.1:-651984 | None:intergenic |
| CATGTCTTCAACTCCACCAG+AGG | 0.652652 | 4.1:-651870 | None:intergenic |
| ATCTTTCAAGATGAGCTCGG+TGG | 0.653857 | 4.1:+647536 | None:intergenic |
| GCGAGTTCCCCAGATCCTCA+CGG | 0.657058 | 4.1:-647790 | None:intergenic |
| AAAAGTATGGGACATATCTG+AGG | 0.658576 | 4.1:+651808 | MS.gene93780:CDS |
| GGTGAGTTATCTTCTGAAGG+TGG | 0.661525 | 4.1:+650565 | MS.gene93780:CDS |
| GGAAGTGAAGCCATTATTGG+TGG | 0.661612 | 4.1:+653200 | MS.gene93780:CDS |
| ACATGCTGTACCATACTGCA+CGG | 0.663929 | 4.1:+653743 | MS.gene93780:CDS |
| AACCGATCTGGCATTGGTGT+AGG | 0.664335 | 4.1:-647646 | None:intergenic |
| TGCACGCCTTCAACAGAACG+TGG | 0.678162 | 4.1:+647579 | MS.gene93780:CDS |
| TCTTTACATGGGGATCAGTG+CGG | 0.680969 | 4.1:+653002 | MS.gene93780:CDS |
| ATATGAGATTGACCAACCTG+TGG | 0.696248 | 4.1:+653837 | MS.gene93780:CDS |
| TCAGGAGTTGTCATGCTGCG+TGG | 0.701235 | 4.1:+653113 | MS.gene93780:CDS |
| ATTCAAGGGATTGGATATAG+CGG | 0.701405 | 4.1:+652094 | MS.gene93780:CDS |
| GTTGGGTGAAAATCGAGCGA+CGG | 0.702331 | 4.1:-647733 | None:intergenic |
| GATTGCTTAAATCTAAAGGG+AGG | 0.704673 | 4.1:-648650 | None:intergenic |
| ACTAGTACTCACATCTCGGG+AGG | 0.705295 | 4.1:-653387 | None:intergenic |
| GAGGGGTTATCTTCCAGACA+CGG | 0.708079 | 4.1:-653960 | None:intergenic |
| CTGACGTGTCAGGTACCGTG+AGG | 0.722749 | 4.1:+647775 | MS.gene93780:CDS |
| AGCAATCCTACTGCTATCAG+GGG | 0.726822 | 4.1:-653785 | None:intergenic |
| ACTGTCCTTGAGAAACATAG+GGG | 0.726823 | 4.1:+653278 | MS.gene93780:CDS |
| CGCCGGAGATGAGAATACCA+CGG | 0.738636 | 4.1:-647602 | None:intergenic |
| TTACAACTTGATCTTCACGG+AGG | 0.742051 | 4.1:-653979 | None:intergenic |
| CATAGACGGAGACATGAAGG+GGG | 0.769626 | 4.1:-647689 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATGAAATTAATTATATT+GGG | - | chr4.1:652683-652702 | None:intergenic | 10.0% |
| !! | TCAAATGAAATTAATTATAT+TGG | - | chr4.1:652684-652703 | None:intergenic | 10.0% |
| !!! | ATAATACTTTTGTTATTTAA+AGG | - | chr4.1:653626-653645 | None:intergenic | 10.0% |
| !!! | TTGATTTTAAAATTTCAAAT+AGG | - | chr4.1:651129-651148 | None:intergenic | 10.0% |
| !! | AATTAAATTAACTAAGTTGT+TGG | - | chr4.1:649310-649329 | None:intergenic | 15.0% |
| !! | TCACTTTACTATATTTATAT+AGG | + | chr4.1:648002-648021 | MS.gene93780:intron | 15.0% |
| !! | TTACTATATTTATATAGGAT+AGG | + | chr4.1:648007-648026 | MS.gene93780:intron | 15.0% |
| !!! | AAATTAATCAGTTAGTTTTA+TGG | - | chr4.1:649627-649646 | None:intergenic | 15.0% |
| !!! | ATGTTATAACTTGTTTTTAT+AGG | + | chr4.1:648296-648315 | MS.gene93780:intron | 15.0% |
| !!! | GATAAAACATAAAAAGTATA+TGG | - | chr4.1:648943-648962 | None:intergenic | 15.0% |
| !!! | GTATTAATTAATTTTAAGTG+AGG | - | chr4.1:650171-650190 | None:intergenic | 15.0% |
| !!! | TAATTAGACACATATTTTTA+AGG | - | chr4.1:648890-648909 | None:intergenic | 15.0% |
| !!! | TGAGTATTTTTTATTGATTA+TGG | + | chr4.1:650650-650669 | MS.gene93780:intron | 15.0% |
| !!! | TGGTTTTATAAATTATAGAT+AGG | - | chr4.1:649266-649285 | None:intergenic | 15.0% |
| !!! | TTTTGCAATTAAAATGAAAA+AGG | + | chr4.1:653577-653596 | MS.gene93780:intron | 15.0% |
| !! | AAGAAAAGAAAAGAAAAGAA+AGG | - | chr4.1:647961-647980 | None:intergenic | 20.0% |
| !! | AATAAGTGTTTATACATGAT+AGG | - | chr4.1:648174-648193 | None:intergenic | 20.0% |
| !! | AATTACTACTGCTTATTTAA+TGG | - | chr4.1:652441-652460 | None:intergenic | 20.0% |
| !! | ACACTATCTTTAAACATAAA+GGG | - | chr4.1:650321-650340 | None:intergenic | 20.0% |
| !! | ACTATAAACTAAGAAATATG+TGG | + | chr4.1:650784-650803 | MS.gene93780:intron | 20.0% |
| !! | AGAATAATAAATCTCATTCA+AGG | + | chr4.1:651473-651492 | MS.gene93780:intron | 20.0% |
| !! | ATATTATAAGTTAGCAATTG+AGG | + | chr4.1:652789-652808 | MS.gene93780:intron | 20.0% |
| !! | ATTACTACTGCTTATTTAAT+GGG | - | chr4.1:652440-652459 | None:intergenic | 20.0% |
| !! | ATTGCTAACTTATAATATCT+TGG | - | chr4.1:652787-652806 | None:intergenic | 20.0% |
| !! | TAAATGAGAATATTGATCTT+TGG | - | chr4.1:649433-649452 | None:intergenic | 20.0% |
| !! | TACACTATCTTTAAACATAA+AGG | - | chr4.1:650322-650341 | None:intergenic | 20.0% |
| !! | TGAGATTTATTATTCTACAT+TGG | - | chr4.1:651469-651488 | None:intergenic | 20.0% |
| !! | TGTTATCTATTGAAGTATAT+TGG | + | chr4.1:652368-652387 | MS.gene93780:intron | 20.0% |
| !! | TTGCTAACTTATAATATCTT+GGG | - | chr4.1:652786-652805 | None:intergenic | 20.0% |
| !! | TTTGTTTATCCAAATCAAAT+TGG | - | chr4.1:652280-652299 | None:intergenic | 20.0% |
| !!! | AAGACATTTTTCTTTATAGA+AGG | - | chr4.1:648965-648984 | None:intergenic | 20.0% |
| !!! | ACGATAATTTGTTTATGTAT+AGG | + | chr4.1:650428-650447 | MS.gene93780:intron | 20.0% |
| !!! | ATGTTTGAGTGAATATTTTT+TGG | + | chr4.1:648417-648436 | MS.gene93780:intron | 20.0% |
| !!! | ATTTTTAAATTATGCTCACT+TGG | - | chr4.1:649655-649674 | None:intergenic | 20.0% |
| !!! | CGATAATTTGTTTATGTATA+GGG | + | chr4.1:650429-650448 | MS.gene93780:intron | 20.0% |
| !!! | GATGAAATAAATCATTTTCT+CGG | + | chr4.1:652345-652364 | MS.gene93780:intron | 20.0% |
| !!! | TATTTTTTATTGATTATGGC+AGG | + | chr4.1:650654-650673 | MS.gene93780:intron | 20.0% |
| !!! | TTCATTTTAATTGCAAAACT+GGG | - | chr4.1:653575-653594 | None:intergenic | 20.0% |
| !!! | TTCTCATTTATTTTATAGCA+AGG | + | chr4.1:649443-649462 | MS.gene93780:intron | 20.0% |
| !!! | TTGATGAATTTTCAAAACAT+TGG | + | chr4.1:648987-649006 | MS.gene93780:intron | 20.0% |
| !!! | TTGCAGATATTTTTAAAATG+TGG | - | chr4.1:649114-649133 | None:intergenic | 20.0% |
| !!! | TTTCATTTTAATTGCAAAAC+TGG | - | chr4.1:653576-653595 | None:intergenic | 20.0% |
| ! | AAGCATCAAAATCAGATATA+GGG | - | chr4.1:648388-648407 | None:intergenic | 25.0% |
| ! | ACTAAAACTCTCCAATATAT+GGG | - | chr4.1:651446-651465 | None:intergenic | 25.0% |
| ! | ACTTGAATCATACATAAAGT+TGG | - | chr4.1:649469-649488 | None:intergenic | 25.0% |
| ! | ATAATAAATCTCATTCAAGG+TGG | + | chr4.1:651476-651495 | MS.gene93780:intron | 25.0% |
| ! | ATCAACATCATAGATTGAAA+AGG | - | chr4.1:650728-650747 | None:intergenic | 25.0% |
| ! | ATTCACTGATGAATATAGTT+TGG | + | chr4.1:653912-653931 | MS.gene93780:CDS | 25.0% |
| ! | ATTTATCAGACGAATGTAAT+AGG | - | chr4.1:650398-650417 | None:intergenic | 25.0% |
| ! | CACACTTCAAAAATCAAAAT+TGG | - | chr4.1:649866-649885 | None:intergenic | 25.0% |
| ! | CGAAAATCGTTTATAACTAA+TGG | + | chr4.1:652922-652941 | MS.gene93780:intron | 25.0% |
| ! | CGAGAAAAAAAAATGAGAAT+TGG | + | chr4.1:649407-649426 | MS.gene93780:intron | 25.0% |
| ! | CTTTAAACATAAAGGGAAAA+GGG | - | chr4.1:650314-650333 | None:intergenic | 25.0% |
| ! | CTTTCATTTACAACTAATCA+TGG | + | chr4.1:648078-648097 | MS.gene93780:intron | 25.0% |
| ! | GAAATATGTGGTAAAGTAAA+AGG | + | chr4.1:650796-650815 | MS.gene93780:intron | 25.0% |
| ! | GAGAAATGTTTCGTATTAAT+TGG | - | chr4.1:652707-652726 | None:intergenic | 25.0% |
| ! | GCTAATAGAAATACCATAAA+GGG | + | chr4.1:653859-653878 | MS.gene93780:CDS | 25.0% |
| ! | GGAAATACAAAAATACTAAC+CGG | + | chr4.1:650055-650074 | MS.gene93780:intron | 25.0% |
| ! | TAATAAATCTCATTCAAGGT+GGG | + | chr4.1:651477-651496 | MS.gene93780:intron | 25.0% |
| ! | TAATCTTGGATTTACTGTTA+CGG | + | chr4.1:653157-653176 | MS.gene93780:CDS | 25.0% |
| ! | TAGAAAAGTGAATATAAGTC+AGG | - | chr4.1:651000-651019 | None:intergenic | 25.0% |
| ! | TATATGTTCTTGAACAAAAC+CGG | - | chr4.1:653425-653444 | None:intergenic | 25.0% |
| ! | TCGATATATTACAAAATCTG+TGG | - | chr4.1:649390-649409 | None:intergenic | 25.0% |
| ! | TCTTTAAACATAAAGGGAAA+AGG | - | chr4.1:650315-650334 | None:intergenic | 25.0% |
| ! | TGAATTATCATTAGATGTCA+GGG | + | chr4.1:649138-649157 | MS.gene93780:intron | 25.0% |
| ! | TGATTTGAATGAATGATTCA+TGG | - | chr4.1:649693-649712 | None:intergenic | 25.0% |
| ! | TGCTTTCAAATATTACAAAC+AGG | + | chr4.1:653529-653548 | MS.gene93780:intron | 25.0% |
| ! | TTTAAACATAAAGGGAAAAG+GGG | - | chr4.1:650313-650332 | None:intergenic | 25.0% |
| ! | TTTCATATATGTTATTGTGC+AGG | + | chr4.1:653708-653727 | MS.gene93780:intron | 25.0% |
| !! | AAAGCATCAAAATCAGATAT+AGG | - | chr4.1:648389-648408 | None:intergenic | 25.0% |
| !! | ATGGCAATATGCAAAATTTT+GGG | - | chr4.1:648924-648943 | None:intergenic | 25.0% |
| !! | ATTTAATTTCGATACTCTGT+TGG | - | chr4.1:652552-652571 | None:intergenic | 25.0% |
| !! | CATCTAGATAAACTATTTTC+AGG | - | chr4.1:648279-648298 | None:intergenic | 25.0% |
| !! | TAATAGTTAAGTGGATTCAA+GGG | + | chr4.1:652080-652099 | MS.gene93780:CDS | 25.0% |
| !! | TATGGCAATATGCAAAATTT+TGG | - | chr4.1:648925-648944 | None:intergenic | 25.0% |
| !! | TTAATAGTTAAGTGGATTCA+AGG | + | chr4.1:652079-652098 | MS.gene93780:CDS | 25.0% |
| !! | TTTCTTGTCAACTTTTATGA+AGG | + | chr4.1:648626-648645 | MS.gene93780:CDS | 25.0% |
| !!! | ATATTTTTAAGGACATGCAA+GGG | - | chr4.1:648879-648898 | None:intergenic | 25.0% |
| !!! | ATTTTTCAATGTTTGCATCA+GGG | + | chr4.1:653330-653349 | MS.gene93780:CDS | 25.0% |
| !!! | GAGAATTCTTCACTTTTTTT+GGG | + | chr4.1:651282-651301 | MS.gene93780:intron | 25.0% |
| !!! | GTCACAACAATATTAGTTTT+TGG | - | chr4.1:652648-652667 | None:intergenic | 25.0% |
| !!! | TATGTCTGGTTTTGATAATA+AGG | + | chr4.1:652180-652199 | MS.gene93780:CDS | 25.0% |
| !!! | TCATTTTAACTTGTAGGTTA+TGG | + | chr4.1:651031-651050 | MS.gene93780:intron | 25.0% |
| !!! | TTAGATTTTGTTTGAGAGTT+TGG | - | chr4.1:651570-651589 | None:intergenic | 25.0% |
| AAATGACTAGTATAGCAAAG+GGG | - | chr4.1:651693-651712 | None:intergenic | 30.0% | |
| AATAAATCTCATTCAAGGTG+GGG | + | chr4.1:651478-651497 | MS.gene93780:intron | 30.0% | |
| AATCAGATATAGGGAATGTT+TGG | - | chr4.1:648379-648398 | None:intergenic | 30.0% | |
| ACATATCTGAGGATAATAGT+GGG | + | chr4.1:651819-651838 | MS.gene93780:CDS | 30.0% | |
| ACGAAACATTTCTCTCTATA+CGG | + | chr4.1:652713-652732 | MS.gene93780:intron | 30.0% | |
| AGAAATGACTAGTATAGCAA+AGG | - | chr4.1:651695-651714 | None:intergenic | 30.0% | |
| AGAGACAAATACGTGAAAAT+GGG | - | chr4.1:650697-650716 | None:intergenic | 30.0% | |
| ATAACAAAAGACACACACAT+AGG | + | chr4.1:649756-649775 | MS.gene93780:intron | 30.0% | |
| ATAAGAACAAACCAAAACAG+AGG | - | chr4.1:650360-650379 | None:intergenic | 30.0% | |
| ATAATATCTTGGGACTAAGA+AGG | - | chr4.1:652776-652795 | None:intergenic | 30.0% | |
| ATAGAAGTTATTCGAGCTAA+GGG | + | chr4.1:650894-650913 | MS.gene93780:intron | 30.0% | |
| ATATGTGTATGTCTTGAACT+GGG | - | chr4.1:649738-649757 | None:intergenic | 30.0% | |
| ATATTTAGCAATTAGTGTGC+GGG | + | chr4.1:652874-652893 | MS.gene93780:intron | 30.0% | |
| ATCATAGATTGAAAAGGAGA+TGG | - | chr4.1:650722-650741 | None:intergenic | 30.0% | |
| ATGATGGCTTAATAGTTAAG+TGG | + | chr4.1:652071-652090 | MS.gene93780:CDS | 30.0% | |
| ATTGAAACTAGAACAAGTTC+AGG | - | chr4.1:653089-653108 | None:intergenic | 30.0% | |
| CATTCATTACTAGATGAGTT+TGG | + | chr4.1:652621-652640 | MS.gene93780:intron | 30.0% | |
| CCAAATCAAATTGGAGAAAA+TGG | - | chr4.1:652271-652290 | None:intergenic | 30.0% | |
| CGAGATTGCTTAAATCTAAA+GGG | - | chr4.1:648656-648675 | None:intergenic | 30.0% | |
| CTATATCGTACTTCTTTAGT+TGG | + | chr4.1:648459-648478 | MS.gene93780:intron | 30.0% | |
| CTGAATTATCATTAGATGTC+AGG | + | chr4.1:649137-649156 | MS.gene93780:intron | 30.0% | |
| CTGCACATATATTCTATTTC+TGG | + | chr4.1:653236-653255 | MS.gene93780:CDS | 30.0% | |
| GAAATGACTAGTATAGCAAA+GGG | - | chr4.1:651694-651713 | None:intergenic | 30.0% | |
| GACTAAAACTCTCCAATATA+TGG | - | chr4.1:651447-651466 | None:intergenic | 30.0% | |
| GATATAGCGGTAAATTACAA+AGG | + | chr4.1:652107-652126 | MS.gene93780:CDS | 30.0% | |
| GATATTTAGCAATTAGTGTG+CGG | + | chr4.1:652873-652892 | MS.gene93780:intron | 30.0% | |
| GATGCAAACATTGAAAAATC+TGG | - | chr4.1:653329-653348 | None:intergenic | 30.0% | |
| GCTAACTTATGATCGTTATT+TGG | - | chr4.1:650023-650042 | None:intergenic | 30.0% | |
| GGAGAGAAACTTATATAAGT+CGG | - | chr4.1:648801-648820 | None:intergenic | 30.0% | |
| GGCTAATAGAAATACCATAA+AGG | + | chr4.1:653858-653877 | MS.gene93780:CDS | 30.0% | |
| GTTGTGTCAATCATTAATCT+TGG | + | chr4.1:653143-653162 | MS.gene93780:CDS | 30.0% | |
| TAAAAATGTATATGACCGCA+CGG | - | chr4.1:649221-649240 | None:intergenic | 30.0% | |
| TATATGTGTATGTCTTGAAC+TGG | - | chr4.1:649739-649758 | None:intergenic | 30.0% | |
| TCAGTTGTAATGTTATCGTT+AGG | + | chr4.1:651757-651776 | MS.gene93780:intron | 30.0% | |
| TGAATGATTCATGGATACTT+TGG | - | chr4.1:649684-649703 | None:intergenic | 30.0% | |
| TGCATCTATGATATTCTAAC+CGG | - | chr4.1:650077-650096 | None:intergenic | 30.0% | |
| ! | ACTAATGTTGGTGAATTTGA+TGG | + | chr4.1:648530-648549 | MS.gene93780:CDS | 30.0% |
| ! | CACATTTTGAATGCAAACTA+TGG | + | chr4.1:650868-650887 | MS.gene93780:intron | 30.0% |
| ! | CATTGGTTGTTTGAGTTTAT+TGG | + | chr4.1:649004-649023 | MS.gene93780:intron | 30.0% |
| ! | CCATTTTCTCCAATTTGATT+TGG | + | chr4.1:652268-652287 | MS.gene93780:intron | 30.0% |
| ! | CTTTTCATATTCCTCTGTTT+TGG | + | chr4.1:650346-650365 | MS.gene93780:intron | 30.0% |
| ! | GTTTTGCTTATACTCTTTGA+CGG | + | chr4.1:652208-652227 | MS.gene93780:intron | 30.0% |
| ! | TTTGGAGTTGATTCTTTCAA+AGG | - | chr4.1:650005-650024 | None:intergenic | 30.0% |
| !! | AAAAAGGGTATCATATTCGA+TGG | + | chr4.1:650523-650542 | MS.gene93780:CDS | 30.0% |
| !! | ATAACATTGATAGTGTAGTG+TGG | - | chr4.1:649809-649828 | None:intergenic | 30.0% |
| !! | ATTTTGTTTGAGAGTTTGGA+GGG | - | chr4.1:651566-651585 | None:intergenic | 30.0% |
| !! | CATATTTTTAAGGACATGCA+AGG | - | chr4.1:648880-648899 | None:intergenic | 30.0% |
| !! | GATTTTTCAATGTTTGCATC+AGG | + | chr4.1:653329-653348 | MS.gene93780:CDS | 30.0% |
| !! | GTTATGGTTTGTTTGTTATC+TGG | + | chr4.1:651047-651066 | MS.gene93780:intron | 30.0% |
| !! | GTTCTAGTTTCAATTGATTC+AGG | + | chr4.1:653095-653114 | MS.gene93780:CDS | 30.0% |
| !! | GTTGTTTTCATAAGTTATCC+TGG | + | chr4.1:648236-648255 | MS.gene93780:intron | 30.0% |
| !! | TACTAGTACTACTTTTGAAC+CGG | + | chr4.1:653403-653422 | MS.gene93780:intron | 30.0% |
| !! | TAGTGTGGTCTTTTGTTATA+TGG | - | chr4.1:649794-649813 | None:intergenic | 30.0% |
| !! | TGCTAGTTTACTGAGATTTT+TGG | + | chr4.1:651191-651210 | MS.gene93780:intron | 30.0% |
| !! | TTGTTATTTAAAGGTCAGCT+TGG | - | chr4.1:653617-653636 | None:intergenic | 30.0% |
| !! | TTTGGGAGAATGTTTTTGAA+GGG | + | chr4.1:651299-651318 | MS.gene93780:intron | 30.0% |
| !! | TTTTGGGAGAATGTTTTTGA+AGG | + | chr4.1:651298-651317 | MS.gene93780:intron | 30.0% |
| !! | TTTTTACTGTACTGATGACA+CGG | - | chr4.1:649972-649991 | None:intergenic | 30.0% |
| !! | TTTTTCAATGTTTGCATCAG+GGG | + | chr4.1:653331-653350 | MS.gene93780:CDS | 30.0% |
| !!! | CAATGAATTCGTTTTGAAGA+AGG | + | chr4.1:647812-647831 | MS.gene93780:CDS | 30.0% |
| !!! | GATTTGCACATTTGTTTTGA+AGG | - | chr4.1:649336-649355 | None:intergenic | 30.0% |
| !!! | GGAGAATTCTTCACTTTTTT+TGG | + | chr4.1:651281-651300 | MS.gene93780:intron | 30.0% |
| !!! | GTTATTTTTATAAGCTGTCC+AGG | - | chr4.1:648257-648276 | None:intergenic | 30.0% |
| !!! | TGTTTGTTATCTGGTCTTTT+GGG | + | chr4.1:651056-651075 | MS.gene93780:intron | 30.0% |
| !!! | TTGCTCTCATTTTAACTTGT+AGG | + | chr4.1:651025-651044 | MS.gene93780:intron | 30.0% |
| !!! | TTGTTTGTTATCTGGTCTTT+TGG | + | chr4.1:651055-651074 | MS.gene93780:intron | 30.0% |
| AAAAATGTATATGACCGCAC+GGG | - | chr4.1:649220-649239 | None:intergenic | 35.0% | |
| AAAGGAAATGAAGGAGTAAG+AGG | - | chr4.1:652954-652973 | None:intergenic | 35.0% | |
| AAGTGAGGATGATGTACAAT+CGG | - | chr4.1:650156-650175 | None:intergenic | 35.0% | |
| AATGACTAGTATAGCAAAGG+GGG | - | chr4.1:651692-651711 | None:intergenic | 35.0% | |
| AATTGCACCATGAAATTGGA+GGG | - | chr4.1:649906-649925 | None:intergenic | 35.0% | |
| AATTTCTGCAATGGATAGGT+GGG | + | chr4.1:648499-648518 | MS.gene93780:intron | 35.0% | |
| ACAGAAGAGAAAGGAAATGA+AGG | - | chr4.1:652963-652982 | None:intergenic | 35.0% | |
| ACGATCTAGTAAAGAGAAAG+GGG | - | chr4.1:649194-649213 | None:intergenic | 35.0% | |
| ACTGTGATCAATTTCTGCAA+TGG | + | chr4.1:648490-648509 | MS.gene93780:intron | 35.0% | |
| AGACGATCTAGTAAAGAGAA+AGG | - | chr4.1:649196-649215 | None:intergenic | 35.0% | |
| AGTGCAACACTAAAATCCTT+TGG | - | chr4.1:653059-653078 | None:intergenic | 35.0% | |
| ATAAATCTCATTCAAGGTGG+GGG | + | chr4.1:651479-651498 | MS.gene93780:intron | 35.0% | |
| ATATGTCCTGAAAACGATGT+CGG | - | chr4.1:651989-652008 | None:intergenic | 35.0% | |
| ATCATATTCGATGGAAAGAC+TGG | + | chr4.1:650532-650551 | MS.gene93780:CDS | 35.0% | |
| ATCATGGCTATGTCATTCTT+TGG | + | chr4.1:648094-648113 | MS.gene93780:intron | 35.0% | |
| ATCTAGTTGACAGAAGAGAA+AGG | - | chr4.1:652972-652991 | None:intergenic | 35.0% | |
| ATGCATGTCTTGATATTACG+TGG | + | chr4.1:652817-652836 | MS.gene93780:intron | 35.0% | |
| ATTAGATGTCAGGGTAAAAC+TGG | + | chr4.1:649147-649166 | MS.gene93780:intron | 35.0% | |
| ATTCAAGGGATTGGATATAG+CGG | + | chr4.1:652094-652113 | MS.gene93780:CDS | 35.0% | |
| ATTCATCATGATAACCGATC+TGG | - | chr4.1:647661-647680 | None:intergenic | 35.0% | |
| CAATTTCATGGTGCAATTCA+GGG | + | chr4.1:649908-649927 | MS.gene93780:intron | 35.0% | |
| CAGGAAACAAAGTGAAAACA+CGG | + | chr4.1:653548-653567 | MS.gene93780:intron | 35.0% | |
| CATAGAAGTTATTCGAGCTA+AGG | + | chr4.1:650893-650912 | MS.gene93780:intron | 35.0% | |
| CGAAACATTTCTCTCTATAC+GGG | + | chr4.1:652714-652733 | MS.gene93780:intron | 35.0% | |
| CTATGTCATTCTTTGGACTT+TGG | + | chr4.1:648101-648120 | MS.gene93780:intron | 35.0% | |
| GAAGAAGAGATTGTTATGTC+TGG | + | chr4.1:652166-652185 | MS.gene93780:CDS | 35.0% | |
| GAAGATAAAGGAGGAGTAAA+GGG | - | chr4.1:651525-651544 | None:intergenic | 35.0% | |
| GACATATCTGAGGATAATAG+TGG | + | chr4.1:651818-651837 | MS.gene93780:CDS | 35.0% | |
| GACGATCTAGTAAAGAGAAA+GGG | - | chr4.1:649195-649214 | None:intergenic | 35.0% | |
| GAGAGACAAATACGTGAAAA+TGG | - | chr4.1:650698-650717 | None:intergenic | 35.0% | |
| GATATAGGGAATGTTTGGAT+TGG | - | chr4.1:648374-648393 | None:intergenic | 35.0% | |
| GATCAATTTCTGCAATGGAT+AGG | + | chr4.1:648495-648514 | MS.gene93780:intron | 35.0% | |
| GATTGCTTAAATCTAAAGGG+AGG | - | chr4.1:648653-648672 | None:intergenic | 35.0% | |
| GCGAGATTGCTTAAATCTAA+AGG | - | chr4.1:648657-648676 | None:intergenic | 35.0% | |
| GGATCCTTCTTGTATCATTA+CGG | + | chr4.1:649585-649604 | MS.gene93780:intron | 35.0% | |
| GTTACAAATTTACTGCCATC+TGG | - | chr4.1:650490-650509 | None:intergenic | 35.0% | |
| GTTCTCATTAGATGTTGTGT+TGG | - | chr4.1:649059-649078 | None:intergenic | 35.0% | |
| GTTGTGCTTATAAACCTACA+AGG | + | chr4.1:648573-648592 | MS.gene93780:CDS | 35.0% | |
| TAGCGGTAAATTACAAAGGA+AGG | + | chr4.1:652111-652130 | MS.gene93780:CDS | 35.0% | |
| TAGTACTAGTACTCACATCT+CGG | - | chr4.1:653394-653413 | None:intergenic | 35.0% | |
| TCATCCGTAATGATACAAGA+AGG | - | chr4.1:649592-649611 | None:intergenic | 35.0% | |
| TCTCTTCTGTCAACTAGATA+AGG | + | chr4.1:652973-652992 | MS.gene93780:intron | 35.0% | |
| TGAAGATAAAGGAGGAGTAA+AGG | - | chr4.1:651526-651545 | None:intergenic | 35.0% | |
| TGAAGATCAGATGTCTAACA+GGG | - | chr4.1:651740-651759 | None:intergenic | 35.0% | |
| TGAATTCTCATTAGACGTCA+GGG | + | chr4.1:650258-650277 | MS.gene93780:intron | 35.0% | |
| TGATTCTTTCAAAGGACACA+AGG | - | chr4.1:649997-650016 | None:intergenic | 35.0% | |
| TTAAATGCAAACGACAAGCA+AGG | - | chr4.1:652307-652326 | None:intergenic | 35.0% | |
| TTAATCGAGAAGCTGTTGTT+TGG | + | chr4.1:653357-653376 | MS.gene93780:CDS | 35.0% | |
| TTAGATGTCAGGGTAAAACT+GGG | + | chr4.1:649148-649167 | MS.gene93780:intron | 35.0% | |
| TTAGATTTAAGCAATCTCGC+AGG | + | chr4.1:648657-648676 | MS.gene93780:CDS | 35.0% | |
| TTTCCCTTCACAAAAATGCA+TGG | - | chr4.1:648822-648841 | None:intergenic | 35.0% | |
| ! | AAAAGTATGGGACATATCTG+AGG | + | chr4.1:651808-651827 | MS.gene93780:CDS | 35.0% |
| ! | ACCCTTTTTGTCAGAACTAA+CGG | - | chr4.1:650512-650531 | None:intergenic | 35.0% |
| ! | ATACATAAAAGCGCGAACAA+AGG | - | chr4.1:647928-647947 | None:intergenic | 35.0% |
| ! | ATGGTATTTCTATTAGCCAC+AGG | - | chr4.1:653856-653875 | None:intergenic | 35.0% |
| ! | GAACTCCAAAAGTACATTGA+CGG | - | chr4.1:651424-651443 | None:intergenic | 35.0% |
| ! | GAATATAGTTTGGTTAGCTC+AGG | + | chr4.1:653922-653941 | MS.gene93780:CDS | 35.0% |
| ! | GTTACTTCTGAGAATGGTTA+AGG | - | chr4.1:652026-652045 | None:intergenic | 35.0% |
| ! | GTTGTTTGAGTTTATTGGAG+TGG | + | chr4.1:649009-649028 | MS.gene93780:intron | 35.0% |
| ! | TAATCGAGAAGCTGTTGTTT+GGG | + | chr4.1:653358-653377 | MS.gene93780:CDS | 35.0% |
| ! | TATCTTGTCACTGTTTCTCT+TGG | + | chr4.1:651920-651939 | MS.gene93780:CDS | 35.0% |
| ! | TATTTCTATTAGCCACAGGT+TGG | - | chr4.1:653852-653871 | None:intergenic | 35.0% |
| ! | TCTCCATGCATTTTTGTGAA+GGG | + | chr4.1:648816-648835 | MS.gene93780:intron | 35.0% |
| ! | TGACAAGTCTGCAAAAGTAT+GGG | + | chr4.1:651796-651815 | MS.gene93780:CDS | 35.0% |
| ! | TGATGTACAATCGGATTTTC+TGG | - | chr4.1:650147-650166 | None:intergenic | 35.0% |
| ! | TTTATTGATTATGGCAGGTC+TGG | + | chr4.1:650659-650678 | MS.gene93780:intron | 35.0% |
| ! | TTTGTTATATGGAGTGTACC+AGG | - | chr4.1:649783-649802 | None:intergenic | 35.0% |
| !! | AACCGTTAGTTCTGACAAAA+AGG | + | chr4.1:650507-650526 | MS.gene93780:CDS | 35.0% |
| !! | ACCGTTAGTTCTGACAAAAA+GGG | + | chr4.1:650508-650527 | MS.gene93780:CDS | 35.0% |
| !! | GATTTTGTTTGAGAGTTTGG+AGG | - | chr4.1:651567-651586 | None:intergenic | 35.0% |
| !! | TAGCTTACTTGTTTTCCATC+AGG | - | chr4.1:650625-650644 | None:intergenic | 35.0% |
| !! | TTTTACTGTACTGATGACAC+GGG | - | chr4.1:649971-649990 | None:intergenic | 35.0% |
| !!! | AACAGTCTAAGGCTTTGTTT+TGG | + | chr4.1:651217-651236 | MS.gene93780:intron | 35.0% |
| !!! | ATTTTTGGCACAACAGTCTA+AGG | + | chr4.1:651206-651225 | MS.gene93780:intron | 35.0% |
| !!! | CTTTTGGAGTTCCCATATAT+TGG | + | chr4.1:651432-651451 | MS.gene93780:intron | 35.0% |
| !!! | TAAGGCTTTGTTTTGGAGTT+TGG | + | chr4.1:651224-651243 | MS.gene93780:intron | 35.0% |
| AACTCAAAACTCGTCTTGAG+TGG | - | chr4.1:648556-648575 | None:intergenic | 40.0% | |
| AAGGAGTTTCGTGTTCTTTC+TGG | + | chr4.1:647831-647850 | MS.gene93780:CDS | 40.0% | |
| ACTGTCCTTGAGAAACATAG+GGG | + | chr4.1:653278-653297 | MS.gene93780:CDS | 40.0% | |
| AGACTGTCCTTGAGAAACAT+AGG | + | chr4.1:653276-653295 | MS.gene93780:CDS | 40.0% | |
| AGCCATCATAACTACAAGAC+AGG | - | chr4.1:652060-652079 | None:intergenic | 40.0% | |
| AGTACTAGTACTCACATCTC+GGG | - | chr4.1:653393-653412 | None:intergenic | 40.0% | |
| AGTGCTTCATGGAGATTTCT+AGG | - | chr4.1:652404-652423 | None:intergenic | 40.0% | |
| AGTTATTCGAGCTAAGGGAT+AGG | + | chr4.1:650899-650918 | MS.gene93780:intron | 40.0% | |
| AGTTTCGTGTTCTTTCTGGA+AGG | + | chr4.1:647835-647854 | MS.gene93780:CDS | 40.0% | |
| ATAAAGGAGGAGTAAAGGGA+AGG | - | chr4.1:651521-651540 | None:intergenic | 40.0% | |
| ATATGAGATTGACCAACCTG+TGG | + | chr4.1:653837-653856 | MS.gene93780:CDS | 40.0% | |
| ATCGGTGAGTTATCTTCTGA+AGG | + | chr4.1:650562-650581 | MS.gene93780:CDS | 40.0% | |
| ATTAGACGTCAGGGTAAAAC+TGG | + | chr4.1:650267-650286 | MS.gene93780:intron | 40.0% | |
| ATTGCACCATGAAATTGGAG+GGG | - | chr4.1:649905-649924 | None:intergenic | 40.0% | |
| CAAGATAATCGTTCAACCAC+AGG | - | chr4.1:651907-651926 | None:intergenic | 40.0% | |
| CAATTTCTGCAATGGATAGG+TGG | + | chr4.1:648498-648517 | MS.gene93780:intron | 40.0% | |
| CACACGAGACAATTTCTGAT+TGG | + | chr4.1:652506-652525 | MS.gene93780:intron | 40.0% | |
| CACGGATAAATTGTCTTGCT+TGG | + | chr4.1:653761-653780 | MS.gene93780:CDS | 40.0% | |
| CAGCATAAATACTGCCAGTA+TGG | - | chr4.1:650591-650610 | None:intergenic | 40.0% | |
| CCAATTTCATGGTGCAATTC+AGG | + | chr4.1:649907-649926 | MS.gene93780:intron | 40.0% | |
| CCTGAATTGCACCATGAAAT+TGG | - | chr4.1:649910-649929 | None:intergenic | 40.0% | |
| CGATCTAGTAAAGAGAAAGG+GGG | - | chr4.1:649193-649212 | None:intergenic | 40.0% | |
| CTCCTGTCTTGTAGTTATGA+TGG | + | chr4.1:652055-652074 | MS.gene93780:CDS | 40.0% | |
| CTGAAGATCAGATGTCTAAC+AGG | - | chr4.1:651741-651760 | None:intergenic | 40.0% | |
| CTGAATTCTCATTAGACGTC+AGG | + | chr4.1:650257-650276 | MS.gene93780:intron | 40.0% | |
| CTGACAAGTCTGCAAAAGTA+TGG | + | chr4.1:651795-651814 | MS.gene93780:CDS | 40.0% | |
| CTTCTGTCAACTAGATAAGG+CGG | + | chr4.1:652976-652995 | MS.gene93780:intron | 40.0% | |
| GAATTGCACCATGAAATTGG+AGG | - | chr4.1:649907-649926 | None:intergenic | 40.0% | |
| GACAATTTATCCGTGCAGTA+TGG | - | chr4.1:653756-653775 | None:intergenic | 40.0% | |
| GACTGTCCTTGAGAAACATA+GGG | + | chr4.1:653277-653296 | MS.gene93780:CDS | 40.0% | |
| GAGTTGAAGACATGCTTGTA+GGG | + | chr4.1:651879-651898 | MS.gene93780:CDS | 40.0% | |
| GATGCTGAAGCCATTGATAT+CGG | + | chr4.1:653026-653045 | MS.gene93780:CDS | 40.0% | |
| GATGGAAGTGAAGCCATTAT+TGG | + | chr4.1:653197-653216 | MS.gene93780:CDS | 40.0% | |
| GCAGTATTTATGCTGTTAGC+TGG | + | chr4.1:650596-650615 | MS.gene93780:CDS | 40.0% | |
| GTATGGTGTGAGAAACTCAA+TGG | + | chr4.1:648679-648698 | MS.gene93780:intron | 40.0% | |
| TAAAGGAGGAGTAAAGGGAA+GGG | - | chr4.1:651520-651539 | None:intergenic | 40.0% | |
| TAAGTTAGCGTCTGTGATGA+AGG | + | chr4.1:650034-650053 | MS.gene93780:intron | 40.0% | |
| TAGCAATCCTACTGCTATCA+GGG | - | chr4.1:653789-653808 | None:intergenic | 40.0% | |
| TATGTCCTGAAAACGATGTC+GGG | - | chr4.1:651988-652007 | None:intergenic | 40.0% | |
| TGATATCGGAAGTCAACCAA+AGG | + | chr4.1:653040-653059 | MS.gene93780:CDS | 40.0% | |
| TGTGTGAGATATTCTCCAGA+TGG | + | chr4.1:650472-650491 | MS.gene93780:CDS | 40.0% | |
| TTAGACGTCAGGGTAAAACT+GGG | + | chr4.1:650268-650287 | MS.gene93780:intron | 40.0% | |
| TTCTGTCAACTAGATAAGGC+GGG | + | chr4.1:652977-652996 | MS.gene93780:intron | 40.0% | |
| TTTAAGCAATCTCGCAGGTA+TGG | + | chr4.1:648662-648681 | MS.gene93780:intron | 40.0% | |
| ! | ACTTCTGAGAATGGTTAAGG+AGG | - | chr4.1:652023-652042 | None:intergenic | 40.0% |
| ! | AGAAATCTCCATGAAGCACT+TGG | + | chr4.1:652404-652423 | MS.gene93780:intron | 40.0% |
| ! | ATAAGGCGGGTTTCTTTACA+TGG | + | chr4.1:652990-653009 | MS.gene93780:CDS | 40.0% |
| ! | ATTTTCACCCAACGGTGAAT+GGG | + | chr4.1:647743-647762 | MS.gene93780:CDS | 40.0% |
| ! | CTCTCCATGCATTTTTGTGA+AGG | + | chr4.1:648815-648834 | MS.gene93780:intron | 40.0% |
| ! | GTTAAGTGGATTCAAGGGAT+TGG | + | chr4.1:652085-652104 | MS.gene93780:CDS | 40.0% |
| ! | TAAGGCGGGTTTCTTTACAT+GGG | + | chr4.1:652991-653010 | MS.gene93780:CDS | 40.0% |
| ! | TCCAAAAGTACATTGACGGA+GGG | - | chr4.1:651420-651439 | None:intergenic | 40.0% |
| ! | TCTAGGGTTACTTCTGAGAA+TGG | - | chr4.1:652032-652051 | None:intergenic | 40.0% |
| ! | TGGCAATGATGAGGATTTTC+TGG | - | chr4.1:650193-650212 | None:intergenic | 40.0% |
| ! | TGGTTGACTTCCGATATCAA+TGG | - | chr4.1:653039-653058 | None:intergenic | 40.0% |
| ! | TTGTCACTGTTTCTCTTGGT+GGG | + | chr4.1:651924-651943 | MS.gene93780:CDS | 40.0% |
| !! | AAAATTGGTGCTACAGCAGT+TGG | - | chr4.1:649851-649870 | None:intergenic | 40.0% |
| !! | AAATTGGTGCTACAGCAGTT+GGG | - | chr4.1:649850-649869 | None:intergenic | 40.0% |
| !! | ACATTGATTTGTTCTGCCTC+TGG | + | chr4.1:651854-651873 | MS.gene93780:CDS | 40.0% |
| AAAGACACACACATAGGACC+TGG | + | chr4.1:649762-649781 | MS.gene93780:intron | 45.0% | |
| ACATGCTGTACCATACTGCA+CGG | + | chr4.1:653743-653762 | MS.gene93780:CDS | 45.0% | |
| ACCATCCTGACCACCAATAA+TGG | - | chr4.1:653213-653232 | None:intergenic | 45.0% | |
| ACCTAAGTGAGCACCCTTTA+TGG | - | chr4.1:653875-653894 | None:intergenic | 45.0% | |
| AGCAATCCTACTGCTATCAG+GGG | - | chr4.1:653788-653807 | None:intergenic | 45.0% | |
| AGTGTGCGGGACAAATTTCA+TGG | + | chr4.1:652887-652906 | MS.gene93780:intron | 45.0% | |
| ATGTCCTGAAAACGATGTCG+GGG | - | chr4.1:651987-652006 | None:intergenic | 45.0% | |
| CAATGGATAGGTGGGATTCT+GGG | + | chr4.1:648507-648526 | MS.gene93780:intron | 45.0% | |
| CATGATAACCGATCTGGCAT+TGG | - | chr4.1:647655-647674 | None:intergenic | 45.0% | |
| CTCACTTAGGTGGGGTTTAT+GGG | + | chr4.1:653884-653903 | MS.gene93780:CDS | 45.0% | |
| GAAGGATCGATGATCTTCAG+TGG | + | chr4.1:647853-647872 | MS.gene93780:CDS | 45.0% | |
| GACAAGAAAATCCTCTCCAC+AGG | - | chr4.1:648615-648634 | None:intergenic | 45.0% | |
| GATAGCAGTAGGATTGCTAC+AGG | + | chr4.1:653790-653809 | MS.gene93780:CDS | 45.0% | |
| GCGACAATTCTGATACCATC+AGG | - | chr4.1:647882-647901 | None:intergenic | 45.0% | |
| GGAAAGACTGGAGAGAAGAT+CGG | + | chr4.1:650544-650563 | MS.gene93780:CDS | 45.0% | |
| GGAAGTGAAGCCATTATTGG+TGG | + | chr4.1:653200-653219 | MS.gene93780:CDS | 45.0% | |
| GGAGTTGAAGACATGCTTGT+AGG | + | chr4.1:651878-651897 | MS.gene93780:CDS | 45.0% | |
| GGAGTTTGGAGGAAAACAGT+GGG | + | chr4.1:651238-651257 | MS.gene93780:intron | 45.0% | |
| GTAAGCATGTTCGCCATAGA+CGG | - | chr4.1:647706-647725 | None:intergenic | 45.0% | |
| GTAGCAATCCTACTGCTATC+AGG | - | chr4.1:653790-653809 | None:intergenic | 45.0% | |
| TAGCACCCCTATGTTTCTCA+AGG | - | chr4.1:653286-653305 | None:intergenic | 45.0% | |
| TCTAACCCCCTCCAATTTCA+TGG | + | chr4.1:649896-649915 | MS.gene93780:intron | 45.0% | |
| TCTTTACATGGGGATCAGTG+CGG | + | chr4.1:653002-653021 | MS.gene93780:CDS | 45.0% | |
| TGGAGTTTGGAGGAAAACAG+TGG | + | chr4.1:651237-651256 | MS.gene93780:intron | 45.0% | |
| TGGTGTGAGAAACTCAATGG+CGG | + | chr4.1:648682-648701 | MS.gene93780:intron | 45.0% | |
| TGTTTGAGAGTTTGGAGGGA+GGG | - | chr4.1:651562-651581 | None:intergenic | 45.0% | |
| TTGCACCATGAAATTGGAGG+GGG | - | chr4.1:649904-649923 | None:intergenic | 45.0% | |
| TTGTTTGAGAGTTTGGAGGG+AGG | - | chr4.1:651563-651582 | None:intergenic | 45.0% | |
| TTTGGAGGAAAACAGTGGGA+GGG | + | chr4.1:651242-651261 | MS.gene93780:intron | 45.0% | |
| ! | AAGGCGGGTTTCTTTACATG+GGG | + | chr4.1:652992-653011 | MS.gene93780:CDS | 45.0% |
| ! | ACAATGCGAAAAGGCCTTGT+AGG | - | chr4.1:648590-648609 | None:intergenic | 45.0% |
| ! | AGGATGCTTTTATCCGTGTC+TGG | + | chr4.1:653947-653966 | MS.gene93780:CDS | 45.0% |
| ! | ATTGGTGTAGGTGATGGTGT+TGG | - | chr4.1:647637-647656 | None:intergenic | 45.0% |
| ! | CTCCAAAAGTACATTGACGG+AGG | - | chr4.1:651421-651440 | None:intergenic | 45.0% |
| ! | CTTGTCACTGTTTCTCTTGG+TGG | + | chr4.1:651923-651942 | MS.gene93780:CDS | 45.0% |
| ! | GATTTTCACCCAACGGTGAA+TGG | + | chr4.1:647742-647761 | MS.gene93780:CDS | 45.0% |
| ! | GGTATCAGAATTGTCGCTTC+TGG | + | chr4.1:647885-647904 | MS.gene93780:CDS | 45.0% |
| ! | GGTGAGTTATCTTCTGAAGG+TGG | + | chr4.1:650565-650584 | MS.gene93780:CDS | 45.0% |
| ! | GTAGGTGATGGTGTTGGATT+TGG | - | chr4.1:647631-647650 | None:intergenic | 45.0% |
| ! | TGAAGCCATTATTGGTGGTC+AGG | + | chr4.1:653205-653224 | MS.gene93780:CDS | 45.0% |
| !! | ACCATAAAGGGTGCTCACTT+AGG | + | chr4.1:653871-653890 | MS.gene93780:CDS | 45.0% |
| !! | ATAAAGGGTGCTCACTTAGG+TGG | + | chr4.1:653874-653893 | MS.gene93780:CDS | 45.0% |
| !! | TAAAGGGTGCTCACTTAGGT+GGG | + | chr4.1:653875-653894 | MS.gene93780:CDS | 45.0% |
| !! | TACAAGACAGGAGCACTCTA+GGG | - | chr4.1:652048-652067 | None:intergenic | 45.0% |
| !! | TGGGATTCTGGGACTAATGT+TGG | + | chr4.1:648518-648537 | MS.gene93780:CDS | 45.0% |
| !! | TTGATTTGTTCTGCCTCTGG+TGG | + | chr4.1:651857-651876 | MS.gene93780:CDS | 45.0% |
| !!! | GGCTTTGTTTTGGAGTTTGG+AGG | + | chr4.1:651227-651246 | MS.gene93780:intron | 45.0% |
| !! | TTTATAAAAAAAAAAGTTAT+TGG | - | chr4.1:649286-649305 | None:intergenic | 5.0% |
| !!! | ATATTATTTTTAAAAAAACA+TGG | + | chr4.1:649564-649583 | MS.gene93780:intron | 5.0% |
| ACTAGTACTCACATCTCGGG+AGG | - | chr4.1:653390-653409 | None:intergenic | 50.0% | |
| AGATGCAACCCATTCACCGT+TGG | - | chr4.1:647754-647773 | None:intergenic | 50.0% | |
| AGTACATTGACGGAGGGCTT+TGG | - | chr4.1:651414-651433 | None:intergenic | 50.0% | |
| CACCTACACCAATGCCAGAT+CGG | + | chr4.1:647644-647663 | MS.gene93780:CDS | 50.0% | |
| CATAGACGGAGACATGAAGG+GGG | - | chr4.1:647692-647711 | None:intergenic | 50.0% | |
| CATGTCTTCAACTCCACCAG+AGG | - | chr4.1:651873-651892 | None:intergenic | 50.0% | |
| CCACAGGTGACAATGCGAAA+AGG | - | chr4.1:648599-648618 | None:intergenic | 50.0% | |
| CCATAGACGGAGACATGAAG+GGG | - | chr4.1:647693-647712 | None:intergenic | 50.0% | |
| CTCTTCTTCTGCAGCTGCTA+AGG | - | chr4.1:652155-652174 | None:intergenic | 50.0% | |
| CTGATGACACGGGACATGTA+TGG | - | chr4.1:649961-649980 | None:intergenic | 50.0% | |
| GAGCTTACGTGGCAATGATG+AGG | - | chr4.1:650202-650221 | None:intergenic | 50.0% | |
| GAGGAGTAAAGGGAAGGGAA+AGG | - | chr4.1:651515-651534 | None:intergenic | 50.0% | |
| GAGGGGAGGAAAGAAAAGGT+AGG | + | chr4.1:651260-651279 | MS.gene93780:intron | 50.0% | |
| GAGGGGTTATCTTCCAGACA+CGG | - | chr4.1:653963-653982 | None:intergenic | 50.0% | |
| GATCTTCAGTGGTCTCCTGA+TGG | + | chr4.1:647864-647883 | MS.gene93780:CDS | 50.0% | |
| GATGCAACCCATTCACCGTT+GGG | - | chr4.1:647753-647772 | None:intergenic | 50.0% | |
| GCAATGGATAGGTGGGATTC+TGG | + | chr4.1:648506-648525 | MS.gene93780:intron | 50.0% | |
| GCATCTGTTGTCTCGTCTGA+TGG | + | chr4.1:653179-653198 | MS.gene93780:CDS | 50.0% | |
| GCCATAGACGGAGACATGAA+GGG | - | chr4.1:647694-647713 | None:intergenic | 50.0% | |
| GCTCACTTAGGTGGGGTTTA+TGG | + | chr4.1:653883-653902 | MS.gene93780:CDS | 50.0% | |
| GGTAGCAAAGTGAGCTTACG+TGG | - | chr4.1:649093-649112 | None:intergenic | 50.0% | |
| GTCGCTTCTGGTGAAGCTAA+AGG | + | chr4.1:647897-647916 | MS.gene93780:CDS | 50.0% | |
| GTTGGGTGAAAATCGAGCGA+CGG | - | chr4.1:647736-647755 | None:intergenic | 50.0% | |
| GTTTGAGAGTTTGGAGGGAG+GGG | - | chr4.1:651561-651580 | None:intergenic | 50.0% | |
| GTTTGGAGGAAAACAGTGGG+AGG | + | chr4.1:651241-651260 | MS.gene93780:intron | 50.0% | |
| TACTAGATCGTCTACCCGTG+CGG | + | chr4.1:649203-649222 | MS.gene93780:intron | 50.0% | |
| TGCACTAGCCAAGTGCTTCA+TGG | - | chr4.1:652415-652434 | None:intergenic | 50.0% | |
| TTGGAGGAAAACAGTGGGAG+GGG | + | chr4.1:651243-651262 | MS.gene93780:intron | 50.0% | |
| ! | AAAGCCCCGACATCGTTTTC+AGG | + | chr4.1:651980-651999 | MS.gene93780:CDS | 50.0% |
| ! | CCTTTTCGCATTGTCACCTG+TGG | + | chr4.1:648596-648615 | MS.gene93780:CDS | 50.0% |
| ! | GCCATTATTGGTGGTCAGGA+TGG | + | chr4.1:653209-653228 | MS.gene93780:CDS | 50.0% |
| ! | GCCCTCCGTCAATGTACTTT+TGG | + | chr4.1:651416-651435 | MS.gene93780:intron | 50.0% |
| ! | GTCGCTCGATTTTCACCCAA+CGG | + | chr4.1:647735-647754 | MS.gene93780:CDS | 50.0% |
| ! | TAGTTTGGTTAGCTCAGGCG+AGG | + | chr4.1:653927-653946 | MS.gene93780:CDS | 50.0% |
| ! | TCTTCTGAAGGTGGCCATAC+TGG | + | chr4.1:650574-650593 | MS.gene93780:CDS | 50.0% |
| !! | AAAGGGTGCTCACTTAGGTG+GGG | + | chr4.1:653876-653895 | MS.gene93780:CDS | 50.0% |
| !! | AACCGATCTGGCATTGGTGT+AGG | - | chr4.1:647649-647668 | None:intergenic | 50.0% |
| !! | CTACAAGACAGGAGCACTCT+AGG | - | chr4.1:652049-652068 | None:intergenic | 50.0% |
| !! | GAGGGCTCTGAAGATAAAGG+AGG | - | chr4.1:651534-651553 | None:intergenic | 50.0% |
| !! | TCTGGCATTGGTGTAGGTGA+TGG | - | chr4.1:647643-647662 | None:intergenic | 50.0% |
| AAAATCGAGCGACGGTGGCA+GGG | - | chr4.1:647728-647747 | None:intergenic | 55.0% | |
| CCCCTTCATGTCTCCGTCTA+TGG | + | chr4.1:647690-647709 | MS.gene93780:CDS | 55.0% | |
| CGCCATAGACGGAGACATGA+AGG | - | chr4.1:647695-647714 | None:intergenic | 55.0% | |
| CGCCGGAGATGAGAATACCA+CGG | - | chr4.1:647605-647624 | None:intergenic | 55.0% | |
| CGGAGACATGAAGGGGGTTA+TGG | - | chr4.1:647686-647705 | None:intergenic | 55.0% | |
| CTTGGTCCCCTGATAGCAGT+AGG | + | chr4.1:653779-653798 | MS.gene93780:CDS | 55.0% | |
| GCTGTTAGCTGGAGTCCTGA+TGG | + | chr4.1:650607-650626 | MS.gene93780:CDS | 55.0% | |
| GGCCGTGGTATTCTCATCTC+CGG | + | chr4.1:647600-647619 | MS.gene93780:CDS | 55.0% | |
| GTGGGAGGGGAGGAAAGAAA+AGG | + | chr4.1:651256-651275 | MS.gene93780:intron | 55.0% | |
| GTTGCATCTGCTGACGTGTC+AGG | + | chr4.1:647765-647784 | MS.gene93780:CDS | 55.0% | |
| TACTCACATCTCGGGAGGCA+CGG | - | chr4.1:653385-653404 | None:intergenic | 55.0% | |
| TCAGGAGTTGTCATGCTGCG+TGG | + | chr4.1:653113-653132 | MS.gene93780:CDS | 55.0% | |
| TCGCATTGTCACCTGTGGAG+AGG | + | chr4.1:648601-648620 | MS.gene93780:CDS | 55.0% | |
| TGCACGCCTTCAACAGAACG+TGG | + | chr4.1:647579-647598 | MS.gene93780:CDS | 55.0% | |
| ! | ACATGCTTGTAGGGTGCCTG+TGG | + | chr4.1:651888-651907 | MS.gene93780:CDS | 55.0% |
| ! | ACGTTCTGTTGAAGGCGTGC+AGG | - | chr4.1:647580-647599 | None:intergenic | 55.0% |
| ! | GGTGTTGGATTTGGAGTCGC+CGG | - | chr4.1:647622-647641 | None:intergenic | 55.0% |
| ! | GTCAGGTACCGTGAGGATCT+GGG | + | chr4.1:647782-647801 | MS.gene93780:CDS | 55.0% |
| ! | TCAGGTACCGTGAGGATCTG+GGG | + | chr4.1:647783-647802 | MS.gene93780:CDS | 55.0% |
| ! | TGTCAGGTACCGTGAGGATC+TGG | + | chr4.1:647781-647800 | MS.gene93780:CDS | 55.0% |
| !! | GGGGAGGGCTCTGAAGATAA+AGG | - | chr4.1:651537-651556 | None:intergenic | 55.0% |
| AGAGTTTGGAGGGAGGGGAG+GGG | - | chr4.1:651556-651575 | None:intergenic | 60.0% | |
| CCACGGCCACGTTCTGTTGA+AGG | - | chr4.1:647588-647607 | None:intergenic | 60.0% | |
| CCTTCAACAGAACGTGGCCG+TGG | + | chr4.1:647585-647604 | MS.gene93780:CDS | 60.0% | |
| GAAAATCGAGCGACGGTGGC+AGG | - | chr4.1:647729-647748 | None:intergenic | 60.0% | |
| GAGAGTTTGGAGGGAGGGGA+GGG | - | chr4.1:651557-651576 | None:intergenic | 60.0% | |
| GAGGAAAACAGTGGGAGGGG+AGG | + | chr4.1:651246-651265 | MS.gene93780:intron | 60.0% | |
| GCGAGTTCCCCAGATCCTCA+CGG | - | chr4.1:647793-647812 | None:intergenic | 60.0% | |
| GGGTGAAAATCGAGCGACGG+TGG | - | chr4.1:647733-647752 | None:intergenic | 60.0% | |
| TGAGAGTTTGGAGGGAGGGG+AGG | - | chr4.1:651558-651577 | None:intergenic | 60.0% | |
| ! | CTGACGTGTCAGGTACCGTG+AGG | + | chr4.1:647775-647794 | MS.gene93780:CDS | 60.0% |
| TTTGGAGGGAGGGGAGGGGA+GGG | - | chr4.1:651552-651571 | None:intergenic | 65.0% | |
| GTTTGGAGGGAGGGGAGGGG+AGG | - | chr4.1:651553-651572 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 647546 | 653987 | 647546 | ID=MS.gene93780 |
| chr4.1 | mRNA | 647546 | 653987 | 647546 | ID=MS.gene93780.t1;Parent=MS.gene93780 |
| chr4.1 | exon | 647546 | 647943 | 647546 | ID=MS.gene93780.t1.exon1;Parent=MS.gene93780.t1 |
| chr4.1 | CDS | 647546 | 647943 | 647546 | ID=cds.MS.gene93780.t1;Parent=MS.gene93780.t1 |
| chr4.1 | exon | 648517 | 648678 | 648517 | ID=MS.gene93780.t1.exon2;Parent=MS.gene93780.t1 |
| chr4.1 | CDS | 648517 | 648678 | 648517 | ID=cds.MS.gene93780.t1;Parent=MS.gene93780.t1 |
| chr4.1 | exon | 650450 | 650636 | 650450 | ID=MS.gene93780.t1.exon3;Parent=MS.gene93780.t1 |
| chr4.1 | CDS | 650450 | 650636 | 650450 | ID=cds.MS.gene93780.t1;Parent=MS.gene93780.t1 |
| chr4.1 | exon | 651779 | 652201 | 651779 | ID=MS.gene93780.t1.exon4;Parent=MS.gene93780.t1 |
| chr4.1 | CDS | 651779 | 652201 | 651779 | ID=cds.MS.gene93780.t1;Parent=MS.gene93780.t1 |
| chr4.1 | exon | 652990 | 653397 | 652990 | ID=MS.gene93780.t1.exon5;Parent=MS.gene93780.t1 |
| chr4.1 | CDS | 652990 | 653397 | 652990 | ID=cds.MS.gene93780.t1;Parent=MS.gene93780.t1 |
| chr4.1 | exon | 653730 | 653987 | 653730 | ID=MS.gene93780.t1.exon6;Parent=MS.gene93780.t1 |
| chr4.1 | CDS | 653730 | 653987 | 653730 | ID=cds.MS.gene93780.t1;Parent=MS.gene93780.t1 |
| Gene Sequence |
| Protein sequence |
