Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62618.t1 | XP_003631073.1 | 98.2 | 611 | 11 | 0 | 1 | 611 | 1 | 611 | 0.00E+00 | 1123.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62618.t1 | Q9LV35 | 75.2 | 608 | 150 | 1 | 4 | 610 | 1 | 608 | 2.8e-252 | 872.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62618.t1 | Q1SN19 | 98.2 | 611 | 11 | 0 | 1 | 611 | 1 | 611 | 0.0e+00 | 1123.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene62618 | MS.gene47297 | PPI |
| MS.gene62618 | MS.gene49831 | PPI |
| MS.gene62618 | MS.gene061041 | PPI |
| MS.gene75846 | MS.gene62618 | PPI |
| MS.gene62618 | MS.gene55829 | PPI |
| MS.gene62618 | MS.gene08137 | PPI |
| MS.gene62618 | MS.gene040852 | PPI |
| MS.gene62618 | MS.gene80320 | PPI |
| MS.gene62618 | MS.gene06110 | PPI |
| MS.gene62618 | MS.gene061659 | PPI |
| MS.gene62618 | MS.gene020596 | PPI |
| MS.gene62618 | MS.gene007355 | PPI |
| MS.gene62618 | MS.gene20209 | PPI |
| MS.gene62618 | MS.gene007592 | PPI |
| MS.gene62618 | MS.gene048963 | PPI |
| MS.gene62618 | MS.gene042491 | PPI |
| MS.gene62618 | MS.gene026418 | PPI |
| MS.gene62618 | MS.gene41795 | PPI |
| MS.gene62618 | MS.gene033840 | PPI |
| MS.gene62618 | MS.gene22354 | PPI |
| MS.gene62618 | MS.gene069541 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62618.t1 | MTR_8g106820 | 98.200 | 611 | 11 | 0 | 1 | 611 | 1 | 611 | 0.0 | 1226 |
| MS.gene62618.t1 | MTR_1g107560 | 72.968 | 603 | 163 | 0 | 6 | 608 | 4 | 606 | 0.0 | 930 |
| MS.gene62618.t1 | MTR_1g054300 | 37.273 | 110 | 61 | 3 | 158 | 264 | 337 | 441 | 1.40e-12 | 70.9 |
| MS.gene62618.t1 | MTR_3g449990 | 24.302 | 358 | 216 | 13 | 179 | 531 | 259 | 566 | 1.36e-11 | 67.8 |
| MS.gene62618.t1 | MTR_1g072140 | 22.989 | 348 | 211 | 13 | 179 | 520 | 16 | 312 | 8.97e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62618.t1 | AT3G18060 | 75.000 | 608 | 151 | 1 | 4 | 610 | 1 | 608 | 0.0 | 957 |
| MS.gene62618.t1 | AT2G01330 | 67.323 | 609 | 195 | 4 | 5 | 610 | 3 | 610 | 0.0 | 862 |
| MS.gene62618.t1 | AT5G52820 | 22.738 | 431 | 281 | 13 | 148 | 564 | 80 | 472 | 7.29e-13 | 71.6 |
| MS.gene62618.t1 | AT2G43770 | 26.174 | 298 | 199 | 10 | 58 | 348 | 52 | 335 | 8.73e-12 | 67.4 |
| MS.gene62618.t1 | AT5G67320 | 23.967 | 242 | 161 | 8 | 52 | 284 | 358 | 585 | 2.00e-11 | 67.4 |
| MS.gene62618.t1 | AT4G02730 | 24.138 | 348 | 203 | 12 | 51 | 392 | 35 | 327 | 6.31e-11 | 64.7 |
Find 162 sgRNAs with CRISPR-Local
Find 410 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCACTTAGGTGGGGTTTA+TGG | 0.082114 | 4.2:+582479 | MS.gene62618:CDS |
| AAGGAGTTTCGTGTTCTTTC+TGG | 0.122384 | 4.2:+576424 | MS.gene62618:CDS |
| CTGCACATATATTCTATTTC+TGG | 0.164431 | 4.2:+581832 | MS.gene62618:CDS |
| ACCTAAGTGAGCACCCTTTA+TGG | 0.179066 | 4.2:-582468 | None:intergenic |
| CTCACTTAGGTGGGGTTTAT+GGG | 0.206529 | 4.2:+582480 | MS.gene62618:CDS |
| AACCGTTAGTTCTGACAAAA+AGG | 0.227495 | 4.2:+579103 | MS.gene62618:CDS |
| GTTCTAGTTTCAATTGATTC+AGG | 0.254254 | 4.2:+581691 | MS.gene62618:CDS |
| GCAATGGATAGGTGGGATTC+TGG | 0.264908 | 4.2:+577095 | MS.gene62618:intron |
| GTAGCAATCCTACTGCTATC+AGG | 0.285417 | 4.2:-582383 | None:intergenic |
| CTGACAAGTCTGCAAAAGTA+TGG | 0.313171 | 4.2:+580391 | MS.gene62618:CDS |
| CCCCTTCATGTCTCCGTCTA+TGG | 0.323756 | 4.2:+576283 | MS.gene62618:CDS |
| ACCATCCTGACCACCAATAA+TGG | 0.326504 | 4.2:-581806 | None:intergenic |
| TGTCAGGTACCGTGAGGATC+TGG | 0.337070 | 4.2:+576374 | MS.gene62618:CDS |
| GTTGTGTCAATCATTAATCT+TGG | 0.338589 | 4.2:+581739 | MS.gene62618:CDS |
| GTAGGTGATGGTGTTGGATT+TGG | 0.348835 | 4.2:-576221 | None:intergenic |
| ATTCACTGATGAATATAGTT+TGG | 0.351324 | 4.2:+582508 | MS.gene62618:CDS |
| GAAAATCGAGCGACGGTGGC+AGG | 0.372098 | 4.2:-576319 | None:intergenic |
| CAGCATAAATACTGCCAGTA+TGG | 0.381490 | 4.2:-579184 | None:intergenic |
| GGCTAATAGAAATACCATAA+AGG | 0.390095 | 4.2:+582454 | MS.gene62618:CDS |
| AGGAGTTTCGTGTTCTTTCT+GGG | 0.399988 | 4.2:+576425 | MS.gene62618:CDS |
| TATCTTGTCACTGTTTCTCT+TGG | 0.401428 | 4.2:+580516 | MS.gene62618:CDS |
| GTTACTTCTGAGAATGGTTA+AGG | 0.405078 | 4.2:-580619 | None:intergenic |
| CTTGTCACTGTTTCTCTTGG+TGG | 0.406048 | 4.2:+580519 | MS.gene62618:CDS |
| GAAGAAGAGATTGTTATGTC+TGG | 0.410474 | 4.2:+580762 | MS.gene62618:CDS |
| TCTTCTGAAGGTGGCCATAC+TGG | 0.414349 | 4.2:+579170 | MS.gene62618:CDS |
| ATTGAAACTAGAACAAGTTC+AGG | 0.414746 | 4.2:-581682 | None:intergenic |
| GCTAATAGAAATACCATAAA+GGG | 0.416716 | 4.2:+582455 | MS.gene62618:CDS |
| TAATCGAGAAGCTGTTGTTT+GGG | 0.419514 | 4.2:+581954 | MS.gene62618:CDS |
| TTAATCGAGAAGCTGTTGTT+TGG | 0.423105 | 4.2:+581953 | MS.gene62618:CDS |
| ACATTGATTTGTTCTGCCTC+TGG | 0.424474 | 4.2:+580450 | MS.gene62618:CDS |
| ACAATGCGAAAAGGCCTTGT+AGG | 0.425304 | 4.2:-577176 | None:intergenic |
| GATGCTGAAGCCATTGATAT+CGG | 0.426975 | 4.2:+581622 | MS.gene62618:CDS |
| CTCCTGTCTTGTAGTTATGA+TGG | 0.428145 | 4.2:+580651 | MS.gene62618:CDS |
| GACAATTTATCCGTGCAGTA+TGG | 0.435214 | 4.2:-582349 | None:intergenic |
| CAATGGATAGGTGGGATTCT+GGG | 0.435336 | 4.2:+577096 | MS.gene62618:intron |
| CTCTTCTTCTGCAGCTGCTA+AGG | 0.435458 | 4.2:-580748 | None:intergenic |
| CTACAAGACAGGAGCACTCT+AGG | 0.437677 | 4.2:-580642 | None:intergenic |
| GATGAGCTCGGTGGAGTTGA+CGG | 0.438057 | 4.2:+576138 | None:intergenic |
| CGAGATTGCTTAAATCTAAA+GGG | 0.439758 | 4.2:-577242 | None:intergenic |
| GGTATCAGAATTGTCGCTTC+TGG | 0.440339 | 4.2:+576478 | MS.gene62618:CDS |
| CACGGATAAATTGTCTTGCT+TGG | 0.442191 | 4.2:+582357 | MS.gene62618:CDS |
| TGAAGCCATTATTGGTGGTC+AGG | 0.444420 | 4.2:+581801 | MS.gene62618:CDS |
| AGTGCAACACTAAAATCCTT+TGG | 0.445789 | 4.2:-581652 | None:intergenic |
| GTTACAAATTTACTGCCATC+TGG | 0.447597 | 4.2:-579083 | None:intergenic |
| GATGGAAGTGAAGCCATTAT+TGG | 0.448281 | 4.2:+581793 | MS.gene62618:CDS |
| TATGTCCTGAAAACGATGTC+GGG | 0.452600 | 4.2:-580581 | None:intergenic |
| TTAATAGTTAAGTGGATTCA+AGG | 0.455728 | 4.2:+580675 | MS.gene62618:CDS |
| TTGTCACTGTTTCTCTTGGT+GGG | 0.456402 | 4.2:+580520 | MS.gene62618:CDS |
| GCGAGATTGCTTAAATCTAA+AGG | 0.459551 | 4.2:-577243 | None:intergenic |
| GTTAAGTGGATTCAAGGGAT+TGG | 0.468346 | 4.2:+580681 | MS.gene62618:CDS |
| GTCAGGTACCGTGAGGATCT+GGG | 0.468616 | 4.2:+576375 | MS.gene62618:CDS |
| GAATATAGTTTGGTTAGCTC+AGG | 0.471315 | 4.2:+582518 | MS.gene62618:CDS |
| ACTAATGTTGGTGAATTTGA+TGG | 0.472283 | 4.2:+577119 | MS.gene62618:CDS |
| CGCCATAGACGGAGACATGA+AGG | 0.472952 | 4.2:-576285 | None:intergenic |
| TAATCTTGGATTTACTGTTA+CGG | 0.474705 | 4.2:+581753 | MS.gene62618:CDS |
| CCACGGCCACGTTCTGTTGA+AGG | 0.475561 | 4.2:-576178 | None:intergenic |
| ATAAGGCGGGTTTCTTTACA+TGG | 0.476069 | 4.2:+581586 | MS.gene62618:CDS |
| GCATCTGTTGTCTCGTCTGA+TGG | 0.480001 | 4.2:+581775 | MS.gene62618:CDS |
| GCAGTATTTATGCTGTTAGC+TGG | 0.481308 | 4.2:+579192 | MS.gene62618:CDS |
| ATCATATTCGATGGAAAGAC+TGG | 0.482024 | 4.2:+579128 | MS.gene62618:CDS |
| GACATATCTGAGGATAATAG+TGG | 0.491671 | 4.2:+580414 | MS.gene62618:CDS |
| TTGATTTGTTCTGCCTCTGG+TGG | 0.491775 | 4.2:+580453 | MS.gene62618:CDS |
| GGAGTTGAAGACATGCTTGT+AGG | 0.493315 | 4.2:+580474 | MS.gene62618:CDS |
| ATTCATCATGATAACCGATC+TGG | 0.494504 | 4.2:-576251 | None:intergenic |
| AGACTGTCCTTGAGAAACAT+AGG | 0.495310 | 4.2:+581872 | MS.gene62618:CDS |
| GTTGCATCTGCTGACGTGTC+AGG | 0.496526 | 4.2:+576358 | MS.gene62618:CDS |
| GCCATTATTGGTGGTCAGGA+TGG | 0.505715 | 4.2:+581805 | MS.gene62618:CDS |
| TCTAGGGTTACTTCTGAGAA+TGG | 0.505822 | 4.2:-580625 | None:intergenic |
| ATGATGGCTTAATAGTTAAG+TGG | 0.506182 | 4.2:+580667 | MS.gene62618:CDS |
| GATGCAACCCATTCACCGTT+GGG | 0.506443 | 4.2:-576343 | None:intergenic |
| ACGTTCTGTTGAAGGCGTGC+AGG | 0.508737 | 4.2:-576170 | None:intergenic |
| CTTGGTCCCCTGATAGCAGT+AGG | 0.509910 | 4.2:+582375 | MS.gene62618:CDS |
| TAGCAATCCTACTGCTATCA+GGG | 0.510406 | 4.2:-582382 | None:intergenic |
| ATGGTATTTCTATTAGCCAC+AGG | 0.512733 | 4.2:-582449 | None:intergenic |
| CATGATAACCGATCTGGCAT+TGG | 0.515012 | 4.2:-576245 | None:intergenic |
| CCACAGGTGACAATGCGAAA+AGG | 0.517474 | 4.2:-577185 | None:intergenic |
| GGCCGTGGTATTCTCATCTC+CGG | 0.518010 | 4.2:+576193 | MS.gene62618:CDS |
| GTCGCTTCTGGTGAAGCTAA+AGG | 0.520427 | 4.2:+576490 | MS.gene62618:CDS |
| TGGTTGACTTCCGATATCAA+TGG | 0.521473 | 4.2:-581632 | None:intergenic |
| GACTGTCCTTGAGAAACATA+GGG | 0.523830 | 4.2:+581873 | MS.gene62618:CDS |
| TAAAGGGTGCTCACTTAGGT+GGG | 0.536033 | 4.2:+582471 | MS.gene62618:CDS |
| TTCTGTCAACTAGATAAGGC+GGG | 0.537021 | 4.2:+581573 | MS.gene62618:intron |
| AGATGCAACCCATTCACCGT+TGG | 0.537671 | 4.2:-576344 | None:intergenic |
| TCTATCTTTCAAGATGAGCT+CGG | 0.538842 | 4.2:+576126 | None:intergenic |
| GAGTTGAAGACATGCTTGTA+GGG | 0.539058 | 4.2:+580475 | MS.gene62618:CDS |
| GCGACAATTCTGATACCATC+AGG | 0.539289 | 4.2:-576472 | None:intergenic |
| GATAGCAGTAGGATTGCTAC+AGG | 0.543234 | 4.2:+582386 | MS.gene62618:CDS |
| TACAAGACAGGAGCACTCTA+GGG | 0.546231 | 4.2:-580641 | None:intergenic |
| TACTCACATCTCGGGAGGCA+CGG | 0.546800 | 4.2:-581978 | None:intergenic |
| GCTGTTAGCTGGAGTCCTGA+TGG | 0.548585 | 4.2:+579203 | MS.gene62618:CDS |
| AGTACTAGTACTCACATCTC+GGG | 0.551436 | 4.2:-581986 | None:intergenic |
| TAGCGGTAAATTACAAAGGA+AGG | 0.551726 | 4.2:+580707 | MS.gene62618:CDS |
| AGCCATCATAACTACAAGAC+AGG | 0.557501 | 4.2:-580653 | None:intergenic |
| GTAAGCATGTTCGCCATAGA+CGG | 0.558880 | 4.2:-576296 | None:intergenic |
| CACCTACACCAATGCCAGAT+CGG | 0.562580 | 4.2:+576237 | MS.gene62618:CDS |
| ACCATAAAGGGTGCTCACTT+AGG | 0.564151 | 4.2:+582467 | MS.gene62618:CDS |
| ATTGGTGTAGGTGATGGTGT+TGG | 0.567354 | 4.2:-576227 | None:intergenic |
| ATAAAGGGTGCTCACTTAGG+TGG | 0.568101 | 4.2:+582470 | MS.gene62618:CDS |
| GGTGTTGGATTTGGAGTCGC+CGG | 0.568267 | 4.2:-576212 | None:intergenic |
| TGGGATTCTGGGACTAATGT+TGG | 0.568712 | 4.2:+577107 | MS.gene62618:CDS |
| TCGCATTGTCACCTGTGGAG+AGG | 0.571600 | 4.2:+577190 | MS.gene62618:CDS |
| TAATAGTTAAGTGGATTCAA+GGG | 0.572072 | 4.2:+580676 | MS.gene62618:CDS |
| ATATGTCCTGAAAACGATGT+CGG | 0.572109 | 4.2:-580582 | None:intergenic |
| CCTTCAACAGAACGTGGCCG+TGG | 0.572710 | 4.2:+576178 | MS.gene62618:CDS |
| CAAGATAATCGTTCAACCAC+AGG | 0.574023 | 4.2:-580500 | None:intergenic |
| GACAAGAAAATCCTCTCCAC+AGG | 0.576600 | 4.2:-577201 | None:intergenic |
| ATCGGTGAGTTATCTTCTGA+AGG | 0.580609 | 4.2:+579158 | MS.gene62618:CDS |
| AACTCAAAACTCGTCTTGAG+TGG | 0.584201 | 4.2:-577142 | None:intergenic |
| GATCTTCAGTGGTCTCCTGA+TGG | 0.585210 | 4.2:+576457 | MS.gene62618:CDS |
| TACAACTTGATCTTCACGGA+GGG | 0.586215 | 4.2:-582574 | None:intergenic |
| ACATGCTTGTAGGGTGCCTG+TGG | 0.597201 | 4.2:+580484 | MS.gene62618:CDS |
| TGACAAGTCTGCAAAAGTAT+GGG | 0.598045 | 4.2:+580392 | MS.gene62618:CDS |
| GCCATAGACGGAGACATGAA+GGG | 0.598923 | 4.2:-576284 | None:intergenic |
| AAAATCGAGCGACGGTGGCA+GGG | 0.599251 | 4.2:-576318 | None:intergenic |
| GGAAAGACTGGAGAGAAGAT+CGG | 0.599432 | 4.2:+579140 | MS.gene62618:CDS |
| CTTCTGTCAACTAGATAAGG+CGG | 0.601647 | 4.2:+581572 | MS.gene62618:intron |
| ATCTGAGGATAATAGTGGGA+AGG | 0.606291 | 4.2:+580419 | MS.gene62618:CDS |
| TATTTCTATTAGCCACAGGT+TGG | 0.608800 | 4.2:-582445 | None:intergenic |
| AAAGGGTGCTCACTTAGGTG+GGG | 0.609702 | 4.2:+582472 | MS.gene62618:CDS |
| ACAACTTGATCTTCACGGAG+GGG | 0.609851 | 4.2:-582573 | None:intergenic |
| TAGCACCCCTATGTTTCTCA+AGG | 0.610582 | 4.2:-581879 | None:intergenic |
| AAGGCGGGTTTCTTTACATG+GGG | 0.611641 | 4.2:+581588 | MS.gene62618:CDS |
| TCTGGCATTGGTGTAGGTGA+TGG | 0.618379 | 4.2:-576233 | None:intergenic |
| GATATAGCGGTAAATTACAA+AGG | 0.618475 | 4.2:+580703 | MS.gene62618:CDS |
| TAAGGCGGGTTTCTTTACAT+GGG | 0.618983 | 4.2:+581587 | MS.gene62618:CDS |
| TGTGTGAGATATTCTCCAGA+TGG | 0.622541 | 4.2:+579068 | MS.gene62618:CDS |
| TAGTTTGGTTAGCTCAGGCG+AGG | 0.625931 | 4.2:+582523 | MS.gene62618:CDS |
| GGGTGAAAATCGAGCGACGG+TGG | 0.626749 | 4.2:-576323 | None:intergenic |
| TCAGGTACCGTGAGGATCTG+GGG | 0.627630 | 4.2:+576376 | MS.gene62618:CDS |
| TTAGATTTAAGCAATCTCGC+AGG | 0.628883 | 4.2:+577246 | MS.gene62618:CDS |
| ACTTCTGAGAATGGTTAAGG+AGG | 0.628997 | 4.2:-580616 | None:intergenic |
| GTTGTGCTTATAAACCTACA+AGG | 0.629807 | 4.2:+577162 | MS.gene62618:CDS |
| CCATAGACGGAGACATGAAG+GGG | 0.633505 | 4.2:-576283 | None:intergenic |
| ACATATCTGAGGATAATAGT+GGG | 0.634727 | 4.2:+580415 | MS.gene62618:CDS |
| GGAGGATCGATGATCTTCAG+TGG | 0.636836 | 4.2:+576446 | MS.gene62618:CDS |
| ATACATAAAAGCGCGAACAA+AGG | 0.644313 | 4.2:-576518 | None:intergenic |
| TGATATCGGAAGTCAACCAA+AGG | 0.651151 | 4.2:+581636 | MS.gene62618:CDS |
| ATGTCCTGAAAACGATGTCG+GGG | 0.652427 | 4.2:-580580 | None:intergenic |
| CATGTCTTCAACTCCACCAG+AGG | 0.652652 | 4.2:-580466 | None:intergenic |
| ATCTTTCAAGATGAGCTCGG+TGG | 0.653857 | 4.2:+576129 | None:intergenic |
| GCGAGTTCCCCAGATCCTCA+CGG | 0.657058 | 4.2:-576383 | None:intergenic |
| AAAAGTATGGGACATATCTG+AGG | 0.658576 | 4.2:+580404 | MS.gene62618:CDS |
| GGTGAGTTATCTTCTGAAGG+TGG | 0.661525 | 4.2:+579161 | MS.gene62618:CDS |
| GGAAGTGAAGCCATTATTGG+TGG | 0.661612 | 4.2:+581796 | MS.gene62618:CDS |
| ACATGCTGTACCATACTGCA+CGG | 0.663929 | 4.2:+582339 | MS.gene62618:CDS |
| AACCGATCTGGCATTGGTGT+AGG | 0.664335 | 4.2:-576239 | None:intergenic |
| AGTTTCGTGTTCTTTCTGGG+AGG | 0.677626 | 4.2:+576428 | MS.gene62618:CDS |
| TGCACGCCTTCAACAGAACG+TGG | 0.678162 | 4.2:+576172 | MS.gene62618:CDS |
| TCTTTACATGGGGATCAGTG+CGG | 0.680969 | 4.2:+581598 | MS.gene62618:CDS |
| ATATGAGATTGACCAACCTG+TGG | 0.696248 | 4.2:+582433 | MS.gene62618:CDS |
| TCAGGAGTTGTCATGCTGCG+TGG | 0.701235 | 4.2:+581709 | MS.gene62618:CDS |
| ATTCAAGGGATTGGATATAG+CGG | 0.701405 | 4.2:+580690 | MS.gene62618:CDS |
| GTTGGGTGAAAATCGAGCGA+CGG | 0.702331 | 4.2:-576326 | None:intergenic |
| GATTGCTTAAATCTAAAGGG+AGG | 0.704673 | 4.2:-577239 | None:intergenic |
| ACTAGTACTCACATCTCGGG+AGG | 0.705295 | 4.2:-581983 | None:intergenic |
| GAGGGGTTATCTTCCAGACA+CGG | 0.708079 | 4.2:-582556 | None:intergenic |
| CTGACGTGTCAGGTACCGTG+AGG | 0.722749 | 4.2:+576368 | MS.gene62618:CDS |
| AGCAATCCTACTGCTATCAG+GGG | 0.726822 | 4.2:-582381 | None:intergenic |
| ACTGTCCTTGAGAAACATAG+GGG | 0.726823 | 4.2:+581874 | MS.gene62618:CDS |
| CGCCGGAGATGAGAATACCA+CGG | 0.738636 | 4.2:-576195 | None:intergenic |
| TTACAACTTGATCTTCACGG+AGG | 0.742051 | 4.2:-582575 | None:intergenic |
| CATAGACGGAGACATGAAGG+GGG | 0.769626 | 4.2:-576282 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATGAAATTAATTATATT+GGG | - | chr4.2:581279-581298 | None:intergenic | 10.0% |
| !! | TCAAATGAAATTAATTATAT+TGG | - | chr4.2:581280-581299 | None:intergenic | 10.0% |
| !!! | ATAATACTTTTGTTATTTAA+AGG | - | chr4.2:582222-582241 | None:intergenic | 10.0% |
| !!! | TTGATTTTAAAATTTCAAAT+AGG | - | chr4.2:579725-579744 | None:intergenic | 10.0% |
| !! | AATTAAATTAACTAAGTTGT+TGG | - | chr4.2:577906-577925 | None:intergenic | 15.0% |
| !!! | AAATTAATCAGTTAGTTTTA+TGG | - | chr4.2:578223-578242 | None:intergenic | 15.0% |
| !!! | ATGTTATAACTTGTTTTTAT+AGG | + | chr4.2:576885-576904 | MS.gene62618:intron | 15.0% |
| !!! | GATAAAACATAAAAAGTATA+TGG | - | chr4.2:577539-577558 | None:intergenic | 15.0% |
| !!! | GTATTAATTAATTTTAAGTG+AGG | - | chr4.2:578767-578786 | None:intergenic | 15.0% |
| !!! | TAATTAGACACATATTTTTA+AGG | - | chr4.2:577486-577505 | None:intergenic | 15.0% |
| !!! | TGAGTATTTTTTATTGATTA+TGG | + | chr4.2:579246-579265 | MS.gene62618:intron | 15.0% |
| !!! | TGGTTTTATAAATTATAGAT+AGG | - | chr4.2:577862-577881 | None:intergenic | 15.0% |
| !!! | TTTTGCAATTAAAATGAAAA+AGG | + | chr4.2:582173-582192 | MS.gene62618:intron | 15.0% |
| !! | AAGAAAAGAAAAGAAAAGAA+AGG | - | chr4.2:576554-576573 | None:intergenic | 20.0% |
| !! | AATAAGTGTTTATACATGAT+AGG | - | chr4.2:576763-576782 | None:intergenic | 20.0% |
| !! | AATTACTACTGCTTATTTAA+TGG | - | chr4.2:581037-581056 | None:intergenic | 20.0% |
| !! | ACACTATCTTTAAACATAAA+GGG | - | chr4.2:578917-578936 | None:intergenic | 20.0% |
| !! | ACTATAAACTAAGAAATATG+TGG | + | chr4.2:579380-579399 | MS.gene62618:intron | 20.0% |
| !! | AGAATAATAAATCTCATTCA+AGG | + | chr4.2:580069-580088 | MS.gene62618:intron | 20.0% |
| !! | ATATTATAAGTTAGCAATTG+AGG | + | chr4.2:581385-581404 | MS.gene62618:intron | 20.0% |
| !! | ATTACTACTGCTTATTTAAT+GGG | - | chr4.2:581036-581055 | None:intergenic | 20.0% |
| !! | ATTGCTAACTTATAATATCT+TGG | - | chr4.2:581383-581402 | None:intergenic | 20.0% |
| !! | TAAATGAGAATATTGATCTT+TGG | - | chr4.2:578029-578048 | None:intergenic | 20.0% |
| !! | TACACTATCTTTAAACATAA+AGG | - | chr4.2:578918-578937 | None:intergenic | 20.0% |
| !! | TGAGATTTATTATTCTACAT+TGG | - | chr4.2:580065-580084 | None:intergenic | 20.0% |
| !! | TGTTATCTATTGAAGTATAT+TGG | + | chr4.2:580964-580983 | MS.gene62618:intron | 20.0% |
| !! | TTGCTAACTTATAATATCTT+GGG | - | chr4.2:581382-581401 | None:intergenic | 20.0% |
| !! | TTTGTTTATCCAAATCAAAT+TGG | - | chr4.2:580876-580895 | None:intergenic | 20.0% |
| !!! | AAGACATTTTTCTTTATAGA+AGG | - | chr4.2:577561-577580 | None:intergenic | 20.0% |
| !!! | ACGATAATTTGTTTATGTAT+AGG | + | chr4.2:579024-579043 | MS.gene62618:intron | 20.0% |
| !!! | ATGTTTGAGTGAATATTTTT+TGG | + | chr4.2:577006-577025 | MS.gene62618:intron | 20.0% |
| !!! | ATTTTTAAATTATGCTCACT+TGG | - | chr4.2:578251-578270 | None:intergenic | 20.0% |
| !!! | CGATAATTTGTTTATGTATA+GGG | + | chr4.2:579025-579044 | MS.gene62618:intron | 20.0% |
| !!! | GATGAAATAAATCATTTTCT+CGG | + | chr4.2:580941-580960 | MS.gene62618:intron | 20.0% |
| !!! | TATTTTTTATTGATTATGGC+AGG | + | chr4.2:579250-579269 | MS.gene62618:intron | 20.0% |
| !!! | TTCATTTTAATTGCAAAACT+GGG | - | chr4.2:582171-582190 | None:intergenic | 20.0% |
| !!! | TTCTCATTTATTTTATAGCA+AGG | + | chr4.2:578039-578058 | MS.gene62618:intron | 20.0% |
| !!! | TTGATGAATTTTCAAAACAT+TGG | + | chr4.2:577583-577602 | MS.gene62618:intron | 20.0% |
| !!! | TTGCAGATATTTTTAAAATG+TGG | - | chr4.2:577710-577729 | None:intergenic | 20.0% |
| !!! | TTTCATTTTAATTGCAAAAC+TGG | - | chr4.2:582172-582191 | None:intergenic | 20.0% |
| ! | AAGCATCAAAATCAGATATA+GGG | - | chr4.2:576977-576996 | None:intergenic | 25.0% |
| ! | ACTAAAACTCTCCAATATAT+GGG | - | chr4.2:580042-580061 | None:intergenic | 25.0% |
| ! | ACTTGAATCATACATAAAGT+TGG | - | chr4.2:578065-578084 | None:intergenic | 25.0% |
| ! | ATAATAAATCTCATTCAAGG+TGG | + | chr4.2:580072-580091 | MS.gene62618:intron | 25.0% |
| ! | ATCAACATCATAGATTGAAA+AGG | - | chr4.2:579324-579343 | None:intergenic | 25.0% |
| ! | ATTCACTGATGAATATAGTT+TGG | + | chr4.2:582508-582527 | MS.gene62618:CDS | 25.0% |
| ! | ATTTATCAGACGAATGTAAT+AGG | - | chr4.2:578994-579013 | None:intergenic | 25.0% |
| ! | CACACTTCAAAAATCAAAAT+TGG | - | chr4.2:578462-578481 | None:intergenic | 25.0% |
| ! | CGAAAATCGTTTATAACTAA+TGG | + | chr4.2:581518-581537 | MS.gene62618:intron | 25.0% |
| ! | CGAGAAAAAAAAATGAGAAT+TGG | + | chr4.2:578003-578022 | MS.gene62618:intron | 25.0% |
| ! | CTTTAAACATAAAGGGAAAA+GGG | - | chr4.2:578910-578929 | None:intergenic | 25.0% |
| ! | CTTTCATTTACAACTAATCA+TGG | + | chr4.2:576667-576686 | MS.gene62618:intron | 25.0% |
| ! | GAAATATGTGGTAAAGTAAA+AGG | + | chr4.2:579392-579411 | MS.gene62618:intron | 25.0% |
| ! | GACTTCACTTTACTATATTT+AGG | + | chr4.2:576591-576610 | MS.gene62618:intron | 25.0% |
| ! | GAGAAATGTTTCGTATTAAT+TGG | - | chr4.2:581303-581322 | None:intergenic | 25.0% |
| ! | GCTAATAGAAATACCATAAA+GGG | + | chr4.2:582455-582474 | MS.gene62618:CDS | 25.0% |
| ! | GGAAATACAAAAATACTAAC+CGG | + | chr4.2:578651-578670 | MS.gene62618:intron | 25.0% |
| ! | TAATAAATCTCATTCAAGGT+GGG | + | chr4.2:580073-580092 | MS.gene62618:intron | 25.0% |
| ! | TAATCTTGGATTTACTGTTA+CGG | + | chr4.2:581753-581772 | MS.gene62618:CDS | 25.0% |
| ! | TAGAAAAGTGAATATAAGTC+AGG | - | chr4.2:579596-579615 | None:intergenic | 25.0% |
| ! | TATATGTTCTTGAACAAAAC+CGG | - | chr4.2:582021-582040 | None:intergenic | 25.0% |
| ! | TCGATATATTACAAAATCTG+TGG | - | chr4.2:577986-578005 | None:intergenic | 25.0% |
| ! | TCTTTAAACATAAAGGGAAA+AGG | - | chr4.2:578911-578930 | None:intergenic | 25.0% |
| ! | TGAATTATCATTAGATGTCA+GGG | + | chr4.2:577734-577753 | MS.gene62618:intron | 25.0% |
| ! | TGATTTGAATGAATGATTCA+TGG | - | chr4.2:578289-578308 | None:intergenic | 25.0% |
| ! | TGCTTTCAAATATTACAAAC+AGG | + | chr4.2:582125-582144 | MS.gene62618:intron | 25.0% |
| ! | TTTAAACATAAAGGGAAAAG+GGG | - | chr4.2:578909-578928 | None:intergenic | 25.0% |
| ! | TTTCATATATGTTATTGTGC+AGG | + | chr4.2:582304-582323 | MS.gene62618:intron | 25.0% |
| !! | AAAGCATCAAAATCAGATAT+AGG | - | chr4.2:576978-576997 | None:intergenic | 25.0% |
| !! | ATGGCAATATGCAAAATTTT+GGG | - | chr4.2:577520-577539 | None:intergenic | 25.0% |
| !! | ATTTAATTTCGATACTCTGT+TGG | - | chr4.2:581148-581167 | None:intergenic | 25.0% |
| !! | CACTTTACTATATTTAGGAT+AGG | + | chr4.2:576596-576615 | MS.gene62618:intron | 25.0% |
| !! | CATCTAGATAAACTATTTTC+AGG | - | chr4.2:576868-576887 | None:intergenic | 25.0% |
| !! | TAATAGTTAAGTGGATTCAA+GGG | + | chr4.2:580676-580695 | MS.gene62618:CDS | 25.0% |
| !! | TATGGCAATATGCAAAATTT+TGG | - | chr4.2:577521-577540 | None:intergenic | 25.0% |
| !! | TTAATAGTTAAGTGGATTCA+AGG | + | chr4.2:580675-580694 | MS.gene62618:CDS | 25.0% |
| !! | TTTCTTGTCAACTTTTATGA+AGG | + | chr4.2:577215-577234 | MS.gene62618:CDS | 25.0% |
| !!! | ATATTTTTAAGGACATGCAA+GGG | - | chr4.2:577475-577494 | None:intergenic | 25.0% |
| !!! | ATTTTTCAATGTTTGCATCA+GGG | + | chr4.2:581926-581945 | MS.gene62618:CDS | 25.0% |
| !!! | GAGAATTCTTCACTTTTTTT+GGG | + | chr4.2:579878-579897 | MS.gene62618:intron | 25.0% |
| !!! | GTCACAACAATATTAGTTTT+TGG | - | chr4.2:581244-581263 | None:intergenic | 25.0% |
| !!! | TATGTCTGGTTTTGATAATA+AGG | + | chr4.2:580776-580795 | MS.gene62618:CDS | 25.0% |
| !!! | TCATTTTAACTTGTAGGTTA+TGG | + | chr4.2:579627-579646 | MS.gene62618:intron | 25.0% |
| !!! | TTAGATTTTGTTTGAGAGTT+TGG | - | chr4.2:580166-580185 | None:intergenic | 25.0% |
| AAATGACTAGTATAGCAAAG+GGG | - | chr4.2:580289-580308 | None:intergenic | 30.0% | |
| AATAAATCTCATTCAAGGTG+GGG | + | chr4.2:580074-580093 | MS.gene62618:intron | 30.0% | |
| AATCAGATATAGGGAATGTT+TGG | - | chr4.2:576968-576987 | None:intergenic | 30.0% | |
| ACATATCTGAGGATAATAGT+GGG | + | chr4.2:580415-580434 | MS.gene62618:CDS | 30.0% | |
| ACGAAACATTTCTCTCTATA+CGG | + | chr4.2:581309-581328 | MS.gene62618:intron | 30.0% | |
| AGAAATGACTAGTATAGCAA+AGG | - | chr4.2:580291-580310 | None:intergenic | 30.0% | |
| AGAGACAAATACGTGAAAAT+GGG | - | chr4.2:579293-579312 | None:intergenic | 30.0% | |
| ATAACAAAAGACACACACAT+AGG | + | chr4.2:578352-578371 | MS.gene62618:intron | 30.0% | |
| ATAAGAACAAACCAAAACAG+AGG | - | chr4.2:578956-578975 | None:intergenic | 30.0% | |
| ATAATATCTTGGGACTAAGA+AGG | - | chr4.2:581372-581391 | None:intergenic | 30.0% | |
| ATAGAAGTTATTCGAGCTAA+GGG | + | chr4.2:579490-579509 | MS.gene62618:intron | 30.0% | |
| ATATGTGTATGTCTTGAACT+GGG | - | chr4.2:578334-578353 | None:intergenic | 30.0% | |
| ATATTTAGCAATTAGTGTGC+GGG | + | chr4.2:581470-581489 | MS.gene62618:intron | 30.0% | |
| ATCATAGATTGAAAAGGAGA+TGG | - | chr4.2:579318-579337 | None:intergenic | 30.0% | |
| ATGATGGCTTAATAGTTAAG+TGG | + | chr4.2:580667-580686 | MS.gene62618:CDS | 30.0% | |
| ATTGAAACTAGAACAAGTTC+AGG | - | chr4.2:581685-581704 | None:intergenic | 30.0% | |
| CATTCATTACTAGATGAGTT+TGG | + | chr4.2:581217-581236 | MS.gene62618:intron | 30.0% | |
| CCAAATCAAATTGGAGAAAA+TGG | - | chr4.2:580867-580886 | None:intergenic | 30.0% | |
| CGAGATTGCTTAAATCTAAA+GGG | - | chr4.2:577245-577264 | None:intergenic | 30.0% | |
| CTATATCGTACTTCTTTAGT+TGG | + | chr4.2:577048-577067 | MS.gene62618:intron | 30.0% | |
| CTGAATTATCATTAGATGTC+AGG | + | chr4.2:577733-577752 | MS.gene62618:intron | 30.0% | |
| CTGCACATATATTCTATTTC+TGG | + | chr4.2:581832-581851 | MS.gene62618:CDS | 30.0% | |
| GAAATGACTAGTATAGCAAA+GGG | - | chr4.2:580290-580309 | None:intergenic | 30.0% | |
| GACTAAAACTCTCCAATATA+TGG | - | chr4.2:580043-580062 | None:intergenic | 30.0% | |
| GATATAGCGGTAAATTACAA+AGG | + | chr4.2:580703-580722 | MS.gene62618:CDS | 30.0% | |
| GATATTTAGCAATTAGTGTG+CGG | + | chr4.2:581469-581488 | MS.gene62618:intron | 30.0% | |
| GATGCAAACATTGAAAAATC+TGG | - | chr4.2:581925-581944 | None:intergenic | 30.0% | |
| GCTAACTTATGATCGTTATT+TGG | - | chr4.2:578619-578638 | None:intergenic | 30.0% | |
| GGAGAGAAACTTATATAAGT+CGG | - | chr4.2:577398-577417 | None:intergenic | 30.0% | |
| GGCTAATAGAAATACCATAA+AGG | + | chr4.2:582454-582473 | MS.gene62618:CDS | 30.0% | |
| GTTGTGTCAATCATTAATCT+TGG | + | chr4.2:581739-581758 | MS.gene62618:CDS | 30.0% | |
| TAAAAATGTATATGACCGCA+CGG | - | chr4.2:577817-577836 | None:intergenic | 30.0% | |
| TATATGTGTATGTCTTGAAC+TGG | - | chr4.2:578335-578354 | None:intergenic | 30.0% | |
| TCAGTTGTAATGTTATCGTT+AGG | + | chr4.2:580353-580372 | MS.gene62618:intron | 30.0% | |
| TGAATGATTCATGGATACTT+TGG | - | chr4.2:578280-578299 | None:intergenic | 30.0% | |
| TGCATCTATGATATTCTAAC+CGG | - | chr4.2:578673-578692 | None:intergenic | 30.0% | |
| ! | ACTAATGTTGGTGAATTTGA+TGG | + | chr4.2:577119-577138 | MS.gene62618:CDS | 30.0% |
| ! | CACATTTTGAATGCAAACTA+TGG | + | chr4.2:579464-579483 | MS.gene62618:intron | 30.0% |
| ! | CATTGGTTGTTTGAGTTTAT+TGG | + | chr4.2:577600-577619 | MS.gene62618:intron | 30.0% |
| ! | CCATTTTCTCCAATTTGATT+TGG | + | chr4.2:580864-580883 | MS.gene62618:intron | 30.0% |
| ! | CTTTTCATATTCCTCTGTTT+TGG | + | chr4.2:578942-578961 | MS.gene62618:intron | 30.0% |
| ! | GTTTTGCTTATACTCTTTGA+CGG | + | chr4.2:580804-580823 | MS.gene62618:intron | 30.0% |
| ! | TTTGGAGTTGATTCTTTCAA+AGG | - | chr4.2:578601-578620 | None:intergenic | 30.0% |
| !! | AAAAAGGGTATCATATTCGA+TGG | + | chr4.2:579119-579138 | MS.gene62618:CDS | 30.0% |
| !! | ATAACATTGATAGTGTAGTG+TGG | - | chr4.2:578405-578424 | None:intergenic | 30.0% |
| !! | ATTTTGTTTGAGAGTTTGGA+GGG | - | chr4.2:580162-580181 | None:intergenic | 30.0% |
| !! | CATATTTTTAAGGACATGCA+AGG | - | chr4.2:577476-577495 | None:intergenic | 30.0% |
| !! | GATTTTTCAATGTTTGCATC+AGG | + | chr4.2:581925-581944 | MS.gene62618:CDS | 30.0% |
| !! | GTTATGGTTTGTTTGTTATC+TGG | + | chr4.2:579643-579662 | MS.gene62618:intron | 30.0% |
| !! | GTTCTAGTTTCAATTGATTC+AGG | + | chr4.2:581691-581710 | MS.gene62618:CDS | 30.0% |
| !! | GTTGTTTTCATAAGTTATCC+TGG | + | chr4.2:576825-576844 | MS.gene62618:intron | 30.0% |
| !! | TACTAGTACTACTTTTGAAC+CGG | + | chr4.2:581999-582018 | MS.gene62618:intron | 30.0% |
| !! | TAGTGTGGTCTTTTGTTATA+TGG | - | chr4.2:578390-578409 | None:intergenic | 30.0% |
| !! | TGCTAGTTTACTGAGATTTT+TGG | + | chr4.2:579787-579806 | MS.gene62618:intron | 30.0% |
| !! | TTGTTATTTAAAGGTCAGCT+TGG | - | chr4.2:582213-582232 | None:intergenic | 30.0% |
| !! | TTTGGGAGAATGTTTTTGAA+GGG | + | chr4.2:579895-579914 | MS.gene62618:intron | 30.0% |
| !! | TTTTGGGAGAATGTTTTTGA+AGG | + | chr4.2:579894-579913 | MS.gene62618:intron | 30.0% |
| !! | TTTTTACTGTACTGATGACA+CGG | - | chr4.2:578568-578587 | None:intergenic | 30.0% |
| !! | TTTTTCAATGTTTGCATCAG+GGG | + | chr4.2:581927-581946 | MS.gene62618:CDS | 30.0% |
| !!! | CAATGAATTCGTTTTGAAGA+AGG | + | chr4.2:576405-576424 | MS.gene62618:CDS | 30.0% |
| !!! | GATTTGCACATTTGTTTTGA+AGG | - | chr4.2:577932-577951 | None:intergenic | 30.0% |
| !!! | GGAGAATTCTTCACTTTTTT+TGG | + | chr4.2:579877-579896 | MS.gene62618:intron | 30.0% |
| !!! | GTTATTTTTATAAGCTGTCC+AGG | - | chr4.2:576846-576865 | None:intergenic | 30.0% |
| !!! | TGTTTGTTATCTGGTCTTTT+GGG | + | chr4.2:579652-579671 | MS.gene62618:intron | 30.0% |
| !!! | TTGCTCTCATTTTAACTTGT+AGG | + | chr4.2:579621-579640 | MS.gene62618:intron | 30.0% |
| !!! | TTGTTTGTTATCTGGTCTTT+TGG | + | chr4.2:579651-579670 | MS.gene62618:intron | 30.0% |
| AAAAATGTATATGACCGCAC+GGG | - | chr4.2:577816-577835 | None:intergenic | 35.0% | |
| AAAGGAAATGAAGGAGTAAG+AGG | - | chr4.2:581550-581569 | None:intergenic | 35.0% | |
| AAGTGAGGATGATGTACAAT+CGG | - | chr4.2:578752-578771 | None:intergenic | 35.0% | |
| AATGACTAGTATAGCAAAGG+GGG | - | chr4.2:580288-580307 | None:intergenic | 35.0% | |
| AATTGCACCATGAAATTGGA+GGG | - | chr4.2:578502-578521 | None:intergenic | 35.0% | |
| AATTTCTGCAATGGATAGGT+GGG | + | chr4.2:577088-577107 | MS.gene62618:intron | 35.0% | |
| ACAGAAGAGAAAGGAAATGA+AGG | - | chr4.2:581559-581578 | None:intergenic | 35.0% | |
| ACGATCTAGTAAAGAGAAAG+GGG | - | chr4.2:577790-577809 | None:intergenic | 35.0% | |
| ACTGTGATCAATTTCTGCAA+TGG | + | chr4.2:577079-577098 | MS.gene62618:intron | 35.0% | |
| AGACGATCTAGTAAAGAGAA+AGG | - | chr4.2:577792-577811 | None:intergenic | 35.0% | |
| AGTGCAACACTAAAATCCTT+TGG | - | chr4.2:581655-581674 | None:intergenic | 35.0% | |
| ATAAATCTCATTCAAGGTGG+GGG | + | chr4.2:580075-580094 | MS.gene62618:intron | 35.0% | |
| ATATGTCCTGAAAACGATGT+CGG | - | chr4.2:580585-580604 | None:intergenic | 35.0% | |
| ATCATATTCGATGGAAAGAC+TGG | + | chr4.2:579128-579147 | MS.gene62618:CDS | 35.0% | |
| ATCATGGCTATGTCATTCTT+TGG | + | chr4.2:576683-576702 | MS.gene62618:intron | 35.0% | |
| ATCTAGTTGACAGAAGAGAA+AGG | - | chr4.2:581568-581587 | None:intergenic | 35.0% | |
| ATGCATGTCTTGATATTACG+TGG | + | chr4.2:581413-581432 | MS.gene62618:intron | 35.0% | |
| ATTAGATGTCAGGGTAAAAC+TGG | + | chr4.2:577743-577762 | MS.gene62618:intron | 35.0% | |
| ATTCAAGGGATTGGATATAG+CGG | + | chr4.2:580690-580709 | MS.gene62618:CDS | 35.0% | |
| ATTCATCATGATAACCGATC+TGG | - | chr4.2:576254-576273 | None:intergenic | 35.0% | |
| CAATTTCATGGTGCAATTCA+GGG | + | chr4.2:578504-578523 | MS.gene62618:intron | 35.0% | |
| CAGGAAACAAAGTGAAAACA+CGG | + | chr4.2:582144-582163 | MS.gene62618:intron | 35.0% | |
| CATAGAAGTTATTCGAGCTA+AGG | + | chr4.2:579489-579508 | MS.gene62618:intron | 35.0% | |
| CGAAACATTTCTCTCTATAC+GGG | + | chr4.2:581310-581329 | MS.gene62618:intron | 35.0% | |
| CTATGTCATTCTTTGGACTT+TGG | + | chr4.2:576690-576709 | MS.gene62618:intron | 35.0% | |
| GAAGAAGAGATTGTTATGTC+TGG | + | chr4.2:580762-580781 | MS.gene62618:CDS | 35.0% | |
| GAAGATAAAGGAGGAGTAAA+GGG | - | chr4.2:580121-580140 | None:intergenic | 35.0% | |
| GACATATCTGAGGATAATAG+TGG | + | chr4.2:580414-580433 | MS.gene62618:CDS | 35.0% | |
| GACGATCTAGTAAAGAGAAA+GGG | - | chr4.2:577791-577810 | None:intergenic | 35.0% | |
| GAGAGACAAATACGTGAAAA+TGG | - | chr4.2:579294-579313 | None:intergenic | 35.0% | |
| GATATAGGGAATGTTTGGAT+TGG | - | chr4.2:576963-576982 | None:intergenic | 35.0% | |
| GATCAATTTCTGCAATGGAT+AGG | + | chr4.2:577084-577103 | MS.gene62618:intron | 35.0% | |
| GATTGCTTAAATCTAAAGGG+AGG | - | chr4.2:577242-577261 | None:intergenic | 35.0% | |
| GCGAGATTGCTTAAATCTAA+AGG | - | chr4.2:577246-577265 | None:intergenic | 35.0% | |
| GGATCCTTCTTGTATCATTA+CGG | + | chr4.2:578181-578200 | MS.gene62618:intron | 35.0% | |
| GTTACAAATTTACTGCCATC+TGG | - | chr4.2:579086-579105 | None:intergenic | 35.0% | |
| GTTCTCATTAGATGTTGTGT+TGG | - | chr4.2:577655-577674 | None:intergenic | 35.0% | |
| GTTGTGCTTATAAACCTACA+AGG | + | chr4.2:577162-577181 | MS.gene62618:CDS | 35.0% | |
| TAGCGGTAAATTACAAAGGA+AGG | + | chr4.2:580707-580726 | MS.gene62618:CDS | 35.0% | |
| TAGTACTAGTACTCACATCT+CGG | - | chr4.2:581990-582009 | None:intergenic | 35.0% | |
| TCATCCGTAATGATACAAGA+AGG | - | chr4.2:578188-578207 | None:intergenic | 35.0% | |
| TCTCTTCTGTCAACTAGATA+AGG | + | chr4.2:581569-581588 | MS.gene62618:intron | 35.0% | |
| TGAAGATAAAGGAGGAGTAA+AGG | - | chr4.2:580122-580141 | None:intergenic | 35.0% | |
| TGAAGATCAGATGTCTAACA+GGG | - | chr4.2:580336-580355 | None:intergenic | 35.0% | |
| TGAATTCTCATTAGACGTCA+GGG | + | chr4.2:578854-578873 | MS.gene62618:intron | 35.0% | |
| TGATTCTTTCAAAGGACACA+AGG | - | chr4.2:578593-578612 | None:intergenic | 35.0% | |
| TTAAATGCAAACGACAAGCA+AGG | - | chr4.2:580903-580922 | None:intergenic | 35.0% | |
| TTAATCGAGAAGCTGTTGTT+TGG | + | chr4.2:581953-581972 | MS.gene62618:CDS | 35.0% | |
| TTAGATGTCAGGGTAAAACT+GGG | + | chr4.2:577744-577763 | MS.gene62618:intron | 35.0% | |
| TTAGATTTAAGCAATCTCGC+AGG | + | chr4.2:577246-577265 | MS.gene62618:CDS | 35.0% | |
| TTTCCCTTCACAAAAATGCA+TGG | - | chr4.2:577419-577438 | None:intergenic | 35.0% | |
| ! | AAAAGTATGGGACATATCTG+AGG | + | chr4.2:580404-580423 | MS.gene62618:CDS | 35.0% |
| ! | ACCCTTTTTGTCAGAACTAA+CGG | - | chr4.2:579108-579127 | None:intergenic | 35.0% |
| ! | ATACATAAAAGCGCGAACAA+AGG | - | chr4.2:576521-576540 | None:intergenic | 35.0% |
| ! | ATGGTATTTCTATTAGCCAC+AGG | - | chr4.2:582452-582471 | None:intergenic | 35.0% |
| ! | GAACTCCAAAAGTACATTGA+CGG | - | chr4.2:580020-580039 | None:intergenic | 35.0% |
| ! | GAATATAGTTTGGTTAGCTC+AGG | + | chr4.2:582518-582537 | MS.gene62618:CDS | 35.0% |
| ! | GTTACTTCTGAGAATGGTTA+AGG | - | chr4.2:580622-580641 | None:intergenic | 35.0% |
| ! | GTTGTTTGAGTTTATTGGAG+TGG | + | chr4.2:577605-577624 | MS.gene62618:intron | 35.0% |
| ! | TAATCGAGAAGCTGTTGTTT+GGG | + | chr4.2:581954-581973 | MS.gene62618:CDS | 35.0% |
| ! | TATCTTGTCACTGTTTCTCT+TGG | + | chr4.2:580516-580535 | MS.gene62618:CDS | 35.0% |
| ! | TATTTCTATTAGCCACAGGT+TGG | - | chr4.2:582448-582467 | None:intergenic | 35.0% |
| ! | TCTCCATGCATTTTTGTGAA+GGG | + | chr4.2:577413-577432 | MS.gene62618:intron | 35.0% |
| ! | TGACAAGTCTGCAAAAGTAT+GGG | + | chr4.2:580392-580411 | MS.gene62618:CDS | 35.0% |
| ! | TGATGTACAATCGGATTTTC+TGG | - | chr4.2:578743-578762 | None:intergenic | 35.0% |
| ! | TTTATTGATTATGGCAGGTC+TGG | + | chr4.2:579255-579274 | MS.gene62618:intron | 35.0% |
| ! | TTTGTTATATGGAGTGTACC+AGG | - | chr4.2:578379-578398 | None:intergenic | 35.0% |
| !! | AACCGTTAGTTCTGACAAAA+AGG | + | chr4.2:579103-579122 | MS.gene62618:CDS | 35.0% |
| !! | ACCGTTAGTTCTGACAAAAA+GGG | + | chr4.2:579104-579123 | MS.gene62618:CDS | 35.0% |
| !! | GATTTTGTTTGAGAGTTTGG+AGG | - | chr4.2:580163-580182 | None:intergenic | 35.0% |
| !! | TAGCTTACTTGTTTTCCATC+AGG | - | chr4.2:579221-579240 | None:intergenic | 35.0% |
| !! | TTTTACTGTACTGATGACAC+GGG | - | chr4.2:578567-578586 | None:intergenic | 35.0% |
| !!! | AACAGTCTAAGGCTTTGTTT+TGG | + | chr4.2:579813-579832 | MS.gene62618:intron | 35.0% |
| !!! | ATTTTTGGCACAACAGTCTA+AGG | + | chr4.2:579802-579821 | MS.gene62618:intron | 35.0% |
| !!! | CTTTTGGAGTTCCCATATAT+TGG | + | chr4.2:580028-580047 | MS.gene62618:intron | 35.0% |
| !!! | TAAGGCTTTGTTTTGGAGTT+TGG | + | chr4.2:579820-579839 | MS.gene62618:intron | 35.0% |
| AACTCAAAACTCGTCTTGAG+TGG | - | chr4.2:577145-577164 | None:intergenic | 40.0% | |
| AAGGAGTTTCGTGTTCTTTC+TGG | + | chr4.2:576424-576443 | MS.gene62618:CDS | 40.0% | |
| ACTGTCCTTGAGAAACATAG+GGG | + | chr4.2:581874-581893 | MS.gene62618:CDS | 40.0% | |
| AGACTGTCCTTGAGAAACAT+AGG | + | chr4.2:581872-581891 | MS.gene62618:CDS | 40.0% | |
| AGCCATCATAACTACAAGAC+AGG | - | chr4.2:580656-580675 | None:intergenic | 40.0% | |
| AGGAGTTTCGTGTTCTTTCT+GGG | + | chr4.2:576425-576444 | MS.gene62618:CDS | 40.0% | |
| AGTACTAGTACTCACATCTC+GGG | - | chr4.2:581989-582008 | None:intergenic | 40.0% | |
| AGTGCTTCATGGAGATTTCT+AGG | - | chr4.2:581000-581019 | None:intergenic | 40.0% | |
| AGTTATTCGAGCTAAGGGAT+AGG | + | chr4.2:579495-579514 | MS.gene62618:intron | 40.0% | |
| ATAAAGGAGGAGTAAAGGGA+AGG | - | chr4.2:580117-580136 | None:intergenic | 40.0% | |
| ATATGAGATTGACCAACCTG+TGG | + | chr4.2:582433-582452 | MS.gene62618:CDS | 40.0% | |
| ATCGGTGAGTTATCTTCTGA+AGG | + | chr4.2:579158-579177 | MS.gene62618:CDS | 40.0% | |
| ATTAGACGTCAGGGTAAAAC+TGG | + | chr4.2:578863-578882 | MS.gene62618:intron | 40.0% | |
| ATTGCACCATGAAATTGGAG+GGG | - | chr4.2:578501-578520 | None:intergenic | 40.0% | |
| CAAGATAATCGTTCAACCAC+AGG | - | chr4.2:580503-580522 | None:intergenic | 40.0% | |
| CAATTTCTGCAATGGATAGG+TGG | + | chr4.2:577087-577106 | MS.gene62618:intron | 40.0% | |
| CACACGAGACAATTTCTGAT+TGG | + | chr4.2:581102-581121 | MS.gene62618:intron | 40.0% | |
| CACGGATAAATTGTCTTGCT+TGG | + | chr4.2:582357-582376 | MS.gene62618:CDS | 40.0% | |
| CAGCATAAATACTGCCAGTA+TGG | - | chr4.2:579187-579206 | None:intergenic | 40.0% | |
| CCAATTTCATGGTGCAATTC+AGG | + | chr4.2:578503-578522 | MS.gene62618:intron | 40.0% | |
| CCTGAATTGCACCATGAAAT+TGG | - | chr4.2:578506-578525 | None:intergenic | 40.0% | |
| CGATCTAGTAAAGAGAAAGG+GGG | - | chr4.2:577789-577808 | None:intergenic | 40.0% | |
| CTCCTGTCTTGTAGTTATGA+TGG | + | chr4.2:580651-580670 | MS.gene62618:CDS | 40.0% | |
| CTGAAGATCAGATGTCTAAC+AGG | - | chr4.2:580337-580356 | None:intergenic | 40.0% | |
| CTGAATTCTCATTAGACGTC+AGG | + | chr4.2:578853-578872 | MS.gene62618:intron | 40.0% | |
| CTGACAAGTCTGCAAAAGTA+TGG | + | chr4.2:580391-580410 | MS.gene62618:CDS | 40.0% | |
| CTTCTGTCAACTAGATAAGG+CGG | + | chr4.2:581572-581591 | MS.gene62618:intron | 40.0% | |
| GAATTGCACCATGAAATTGG+AGG | - | chr4.2:578503-578522 | None:intergenic | 40.0% | |
| GACAATTTATCCGTGCAGTA+TGG | - | chr4.2:582352-582371 | None:intergenic | 40.0% | |
| GACTGTCCTTGAGAAACATA+GGG | + | chr4.2:581873-581892 | MS.gene62618:CDS | 40.0% | |
| GAGTTGAAGACATGCTTGTA+GGG | + | chr4.2:580475-580494 | MS.gene62618:CDS | 40.0% | |
| GATGCTGAAGCCATTGATAT+CGG | + | chr4.2:581622-581641 | MS.gene62618:CDS | 40.0% | |
| GATGGAAGTGAAGCCATTAT+TGG | + | chr4.2:581793-581812 | MS.gene62618:CDS | 40.0% | |
| GCAGTATTTATGCTGTTAGC+TGG | + | chr4.2:579192-579211 | MS.gene62618:CDS | 40.0% | |
| GCGCTTATGCTATAAGCTAT+AGG | - | chr4.2:576741-576760 | None:intergenic | 40.0% | |
| GTATGGTGTGAGAAACTCAA+TGG | + | chr4.2:577268-577287 | MS.gene62618:intron | 40.0% | |
| TAAAGGAGGAGTAAAGGGAA+GGG | - | chr4.2:580116-580135 | None:intergenic | 40.0% | |
| TAAGTTAGCGTCTGTGATGA+AGG | + | chr4.2:578630-578649 | MS.gene62618:intron | 40.0% | |
| TAGCAATCCTACTGCTATCA+GGG | - | chr4.2:582385-582404 | None:intergenic | 40.0% | |
| TATGTCCTGAAAACGATGTC+GGG | - | chr4.2:580584-580603 | None:intergenic | 40.0% | |
| TGATATCGGAAGTCAACCAA+AGG | + | chr4.2:581636-581655 | MS.gene62618:CDS | 40.0% | |
| TGTGTGAGATATTCTCCAGA+TGG | + | chr4.2:579068-579087 | MS.gene62618:CDS | 40.0% | |
| TTAGACGTCAGGGTAAAACT+GGG | + | chr4.2:578864-578883 | MS.gene62618:intron | 40.0% | |
| TTCTGTCAACTAGATAAGGC+GGG | + | chr4.2:581573-581592 | MS.gene62618:intron | 40.0% | |
| TTTAAGCAATCTCGCAGGTA+TGG | + | chr4.2:577251-577270 | MS.gene62618:intron | 40.0% | |
| ! | ACTTCTGAGAATGGTTAAGG+AGG | - | chr4.2:580619-580638 | None:intergenic | 40.0% |
| ! | AGAAATCTCCATGAAGCACT+TGG | + | chr4.2:581000-581019 | MS.gene62618:intron | 40.0% |
| ! | ATAAGGCGGGTTTCTTTACA+TGG | + | chr4.2:581586-581605 | MS.gene62618:CDS | 40.0% |
| ! | ATTTTCACCCAACGGTGAAT+GGG | + | chr4.2:576336-576355 | MS.gene62618:CDS | 40.0% |
| ! | CTCTCCATGCATTTTTGTGA+AGG | + | chr4.2:577412-577431 | MS.gene62618:intron | 40.0% |
| ! | GTTAAGTGGATTCAAGGGAT+TGG | + | chr4.2:580681-580700 | MS.gene62618:CDS | 40.0% |
| ! | TAAGGCGGGTTTCTTTACAT+GGG | + | chr4.2:581587-581606 | MS.gene62618:CDS | 40.0% |
| ! | TCCAAAAGTACATTGACGGA+GGG | - | chr4.2:580016-580035 | None:intergenic | 40.0% |
| ! | TCTAGGGTTACTTCTGAGAA+TGG | - | chr4.2:580628-580647 | None:intergenic | 40.0% |
| ! | TGGCAATGATGAGGATTTTC+TGG | - | chr4.2:578789-578808 | None:intergenic | 40.0% |
| ! | TGGTTGACTTCCGATATCAA+TGG | - | chr4.2:581635-581654 | None:intergenic | 40.0% |
| ! | TTGTCACTGTTTCTCTTGGT+GGG | + | chr4.2:580520-580539 | MS.gene62618:CDS | 40.0% |
| !! | AAAATTGGTGCTACAGCAGT+TGG | - | chr4.2:578447-578466 | None:intergenic | 40.0% |
| !! | AAATTGGTGCTACAGCAGTT+GGG | - | chr4.2:578446-578465 | None:intergenic | 40.0% |
| !! | ACATTGATTTGTTCTGCCTC+TGG | + | chr4.2:580450-580469 | MS.gene62618:CDS | 40.0% |
| AAAGACACACACATAGGACC+TGG | + | chr4.2:578358-578377 | MS.gene62618:intron | 45.0% | |
| ACATGCTGTACCATACTGCA+CGG | + | chr4.2:582339-582358 | MS.gene62618:CDS | 45.0% | |
| ACCATCCTGACCACCAATAA+TGG | - | chr4.2:581809-581828 | None:intergenic | 45.0% | |
| ACCTAAGTGAGCACCCTTTA+TGG | - | chr4.2:582471-582490 | None:intergenic | 45.0% | |
| AGCAATCCTACTGCTATCAG+GGG | - | chr4.2:582384-582403 | None:intergenic | 45.0% | |
| AGTGTGCGGGACAAATTTCA+TGG | + | chr4.2:581483-581502 | MS.gene62618:intron | 45.0% | |
| AGTTTCGTGTTCTTTCTGGG+AGG | + | chr4.2:576428-576447 | MS.gene62618:CDS | 45.0% | |
| ATGTCCTGAAAACGATGTCG+GGG | - | chr4.2:580583-580602 | None:intergenic | 45.0% | |
| CAATGGATAGGTGGGATTCT+GGG | + | chr4.2:577096-577115 | MS.gene62618:intron | 45.0% | |
| CATGATAACCGATCTGGCAT+TGG | - | chr4.2:576248-576267 | None:intergenic | 45.0% | |
| CTCACTTAGGTGGGGTTTAT+GGG | + | chr4.2:582480-582499 | MS.gene62618:CDS | 45.0% | |
| GACAAGAAAATCCTCTCCAC+AGG | - | chr4.2:577204-577223 | None:intergenic | 45.0% | |
| GATAGCAGTAGGATTGCTAC+AGG | + | chr4.2:582386-582405 | MS.gene62618:CDS | 45.0% | |
| GCGACAATTCTGATACCATC+AGG | - | chr4.2:576475-576494 | None:intergenic | 45.0% | |
| GGAAAGACTGGAGAGAAGAT+CGG | + | chr4.2:579140-579159 | MS.gene62618:CDS | 45.0% | |
| GGAAGTGAAGCCATTATTGG+TGG | + | chr4.2:581796-581815 | MS.gene62618:CDS | 45.0% | |
| GGAGTTGAAGACATGCTTGT+AGG | + | chr4.2:580474-580493 | MS.gene62618:CDS | 45.0% | |
| GGAGTTTGGAGGAAAACAGT+GGG | + | chr4.2:579834-579853 | MS.gene62618:intron | 45.0% | |
| GTAAGCATGTTCGCCATAGA+CGG | - | chr4.2:576299-576318 | None:intergenic | 45.0% | |
| GTAGCAATCCTACTGCTATC+AGG | - | chr4.2:582386-582405 | None:intergenic | 45.0% | |
| TAGCACCCCTATGTTTCTCA+AGG | - | chr4.2:581882-581901 | None:intergenic | 45.0% | |
| TCTAACCCCCTCCAATTTCA+TGG | + | chr4.2:578492-578511 | MS.gene62618:intron | 45.0% | |
| TCTTTACATGGGGATCAGTG+CGG | + | chr4.2:581598-581617 | MS.gene62618:CDS | 45.0% | |
| TGGAGTTTGGAGGAAAACAG+TGG | + | chr4.2:579833-579852 | MS.gene62618:intron | 45.0% | |
| TGGTGTGAGAAACTCAATGG+CGG | + | chr4.2:577271-577290 | MS.gene62618:intron | 45.0% | |
| TGTTTGAGAGTTTGGAGGGA+GGG | - | chr4.2:580158-580177 | None:intergenic | 45.0% | |
| TTGCACCATGAAATTGGAGG+GGG | - | chr4.2:578500-578519 | None:intergenic | 45.0% | |
| TTGTTTGAGAGTTTGGAGGG+AGG | - | chr4.2:580159-580178 | None:intergenic | 45.0% | |
| TTTGGAGGAAAACAGTGGGA+GGG | + | chr4.2:579838-579857 | MS.gene62618:intron | 45.0% | |
| ! | AAGGCGGGTTTCTTTACATG+GGG | + | chr4.2:581588-581607 | MS.gene62618:CDS | 45.0% |
| ! | ACAATGCGAAAAGGCCTTGT+AGG | - | chr4.2:577179-577198 | None:intergenic | 45.0% |
| ! | AGGATGCTTTTATCCGTGTC+TGG | + | chr4.2:582543-582562 | MS.gene62618:CDS | 45.0% |
| ! | ATTGGTGTAGGTGATGGTGT+TGG | - | chr4.2:576230-576249 | None:intergenic | 45.0% |
| ! | CTCCAAAAGTACATTGACGG+AGG | - | chr4.2:580017-580036 | None:intergenic | 45.0% |
| ! | CTTGTCACTGTTTCTCTTGG+TGG | + | chr4.2:580519-580538 | MS.gene62618:CDS | 45.0% |
| ! | GATTTTCACCCAACGGTGAA+TGG | + | chr4.2:576335-576354 | MS.gene62618:CDS | 45.0% |
| ! | GGTATCAGAATTGTCGCTTC+TGG | + | chr4.2:576478-576497 | MS.gene62618:CDS | 45.0% |
| ! | GGTGAGTTATCTTCTGAAGG+TGG | + | chr4.2:579161-579180 | MS.gene62618:CDS | 45.0% |
| ! | GTAGGTGATGGTGTTGGATT+TGG | - | chr4.2:576224-576243 | None:intergenic | 45.0% |
| ! | TGAAGCCATTATTGGTGGTC+AGG | + | chr4.2:581801-581820 | MS.gene62618:CDS | 45.0% |
| !! | ACCATAAAGGGTGCTCACTT+AGG | + | chr4.2:582467-582486 | MS.gene62618:CDS | 45.0% |
| !! | ATAAAGGGTGCTCACTTAGG+TGG | + | chr4.2:582470-582489 | MS.gene62618:CDS | 45.0% |
| !! | TAAAGGGTGCTCACTTAGGT+GGG | + | chr4.2:582471-582490 | MS.gene62618:CDS | 45.0% |
| !! | TACAAGACAGGAGCACTCTA+GGG | - | chr4.2:580644-580663 | None:intergenic | 45.0% |
| !! | TGGGATTCTGGGACTAATGT+TGG | + | chr4.2:577107-577126 | MS.gene62618:CDS | 45.0% |
| !! | TTGATTTGTTCTGCCTCTGG+TGG | + | chr4.2:580453-580472 | MS.gene62618:CDS | 45.0% |
| !!! | GGCTTTGTTTTGGAGTTTGG+AGG | + | chr4.2:579823-579842 | MS.gene62618:intron | 45.0% |
| !! | TTTATAAAAAAAAAAGTTAT+TGG | - | chr4.2:577882-577901 | None:intergenic | 5.0% |
| !!! | ATATTATTTTTAAAAAAACA+TGG | + | chr4.2:578160-578179 | MS.gene62618:intron | 5.0% |
| ACTAGTACTCACATCTCGGG+AGG | - | chr4.2:581986-582005 | None:intergenic | 50.0% | |
| AGATGCAACCCATTCACCGT+TGG | - | chr4.2:576347-576366 | None:intergenic | 50.0% | |
| AGTACATTGACGGAGGGCTT+TGG | - | chr4.2:580010-580029 | None:intergenic | 50.0% | |
| CACCTACACCAATGCCAGAT+CGG | + | chr4.2:576237-576256 | MS.gene62618:CDS | 50.0% | |
| CATAGACGGAGACATGAAGG+GGG | - | chr4.2:576285-576304 | None:intergenic | 50.0% | |
| CATGTCTTCAACTCCACCAG+AGG | - | chr4.2:580469-580488 | None:intergenic | 50.0% | |
| CCACAGGTGACAATGCGAAA+AGG | - | chr4.2:577188-577207 | None:intergenic | 50.0% | |
| CCATAGACGGAGACATGAAG+GGG | - | chr4.2:576286-576305 | None:intergenic | 50.0% | |
| CTCTTCTTCTGCAGCTGCTA+AGG | - | chr4.2:580751-580770 | None:intergenic | 50.0% | |
| CTGATGACACGGGACATGTA+TGG | - | chr4.2:578557-578576 | None:intergenic | 50.0% | |
| GAGCTTACGTGGCAATGATG+AGG | - | chr4.2:578798-578817 | None:intergenic | 50.0% | |
| GAGGAGTAAAGGGAAGGGAA+AGG | - | chr4.2:580111-580130 | None:intergenic | 50.0% | |
| GAGGGGAGGAAAGAAAAGGT+AGG | + | chr4.2:579856-579875 | MS.gene62618:intron | 50.0% | |
| GAGGGGTTATCTTCCAGACA+CGG | - | chr4.2:582559-582578 | None:intergenic | 50.0% | |
| GATCTTCAGTGGTCTCCTGA+TGG | + | chr4.2:576457-576476 | MS.gene62618:CDS | 50.0% | |
| GATGCAACCCATTCACCGTT+GGG | - | chr4.2:576346-576365 | None:intergenic | 50.0% | |
| GCAATGGATAGGTGGGATTC+TGG | + | chr4.2:577095-577114 | MS.gene62618:intron | 50.0% | |
| GCATCTGTTGTCTCGTCTGA+TGG | + | chr4.2:581775-581794 | MS.gene62618:CDS | 50.0% | |
| GCCATAGACGGAGACATGAA+GGG | - | chr4.2:576287-576306 | None:intergenic | 50.0% | |
| GCTCACTTAGGTGGGGTTTA+TGG | + | chr4.2:582479-582498 | MS.gene62618:CDS | 50.0% | |
| GGAGGATCGATGATCTTCAG+TGG | + | chr4.2:576446-576465 | MS.gene62618:CDS | 50.0% | |
| GGTAGCAAAGTGAGCTTACG+TGG | - | chr4.2:577689-577708 | None:intergenic | 50.0% | |
| GTCGCTTCTGGTGAAGCTAA+AGG | + | chr4.2:576490-576509 | MS.gene62618:CDS | 50.0% | |
| GTTGGGTGAAAATCGAGCGA+CGG | - | chr4.2:576329-576348 | None:intergenic | 50.0% | |
| GTTTGAGAGTTTGGAGGGAG+GGG | - | chr4.2:580157-580176 | None:intergenic | 50.0% | |
| GTTTGGAGGAAAACAGTGGG+AGG | + | chr4.2:579837-579856 | MS.gene62618:intron | 50.0% | |
| TACTAGATCGTCTACCCGTG+CGG | + | chr4.2:577799-577818 | MS.gene62618:intron | 50.0% | |
| TGCACTAGCCAAGTGCTTCA+TGG | - | chr4.2:581011-581030 | None:intergenic | 50.0% | |
| TTGGAGGAAAACAGTGGGAG+GGG | + | chr4.2:579839-579858 | MS.gene62618:intron | 50.0% | |
| ! | AAAGCCCCGACATCGTTTTC+AGG | + | chr4.2:580576-580595 | MS.gene62618:CDS | 50.0% |
| ! | CCTTTTCGCATTGTCACCTG+TGG | + | chr4.2:577185-577204 | MS.gene62618:CDS | 50.0% |
| ! | GCCATTATTGGTGGTCAGGA+TGG | + | chr4.2:581805-581824 | MS.gene62618:CDS | 50.0% |
| ! | GCCCTCCGTCAATGTACTTT+TGG | + | chr4.2:580012-580031 | MS.gene62618:intron | 50.0% |
| ! | GTCGCTCGATTTTCACCCAA+CGG | + | chr4.2:576328-576347 | MS.gene62618:CDS | 50.0% |
| ! | TAGTTTGGTTAGCTCAGGCG+AGG | + | chr4.2:582523-582542 | MS.gene62618:CDS | 50.0% |
| ! | TCTTCTGAAGGTGGCCATAC+TGG | + | chr4.2:579170-579189 | MS.gene62618:CDS | 50.0% |
| !! | AAAGGGTGCTCACTTAGGTG+GGG | + | chr4.2:582472-582491 | MS.gene62618:CDS | 50.0% |
| !! | AACCGATCTGGCATTGGTGT+AGG | - | chr4.2:576242-576261 | None:intergenic | 50.0% |
| !! | CTACAAGACAGGAGCACTCT+AGG | - | chr4.2:580645-580664 | None:intergenic | 50.0% |
| !! | GAGGGCTCTGAAGATAAAGG+AGG | - | chr4.2:580130-580149 | None:intergenic | 50.0% |
| !! | TCTGGCATTGGTGTAGGTGA+TGG | - | chr4.2:576236-576255 | None:intergenic | 50.0% |
| AAAATCGAGCGACGGTGGCA+GGG | - | chr4.2:576321-576340 | None:intergenic | 55.0% | |
| CCCCTTCATGTCTCCGTCTA+TGG | + | chr4.2:576283-576302 | MS.gene62618:CDS | 55.0% | |
| CGCCATAGACGGAGACATGA+AGG | - | chr4.2:576288-576307 | None:intergenic | 55.0% | |
| CGCCGGAGATGAGAATACCA+CGG | - | chr4.2:576198-576217 | None:intergenic | 55.0% | |
| CGGAGACATGAAGGGGGTTA+TGG | - | chr4.2:576279-576298 | None:intergenic | 55.0% | |
| CTTGGTCCCCTGATAGCAGT+AGG | + | chr4.2:582375-582394 | MS.gene62618:CDS | 55.0% | |
| GCTGTTAGCTGGAGTCCTGA+TGG | + | chr4.2:579203-579222 | MS.gene62618:CDS | 55.0% | |
| GGAAGATAACCCCTCCGTGA+AGG | + | chr4.2:582564-582583 | MS.gene62618:CDS | 55.0% | |
| GGCCGTGGTATTCTCATCTC+CGG | + | chr4.2:576193-576212 | MS.gene62618:CDS | 55.0% | |
| GTGGGAGGGGAGGAAAGAAA+AGG | + | chr4.2:579852-579871 | MS.gene62618:intron | 55.0% | |
| GTTGCATCTGCTGACGTGTC+AGG | + | chr4.2:576358-576377 | MS.gene62618:CDS | 55.0% | |
| TACTCACATCTCGGGAGGCA+CGG | - | chr4.2:581981-582000 | None:intergenic | 55.0% | |
| TCAGGAGTTGTCATGCTGCG+TGG | + | chr4.2:581709-581728 | MS.gene62618:CDS | 55.0% | |
| TCGCATTGTCACCTGTGGAG+AGG | + | chr4.2:577190-577209 | MS.gene62618:CDS | 55.0% | |
| TGCACGCCTTCAACAGAACG+TGG | + | chr4.2:576172-576191 | MS.gene62618:CDS | 55.0% | |
| ! | ACATGCTTGTAGGGTGCCTG+TGG | + | chr4.2:580484-580503 | MS.gene62618:CDS | 55.0% |
| ! | ACGTTCTGTTGAAGGCGTGC+AGG | - | chr4.2:576173-576192 | None:intergenic | 55.0% |
| ! | GGTGTTGGATTTGGAGTCGC+CGG | - | chr4.2:576215-576234 | None:intergenic | 55.0% |
| ! | GTCAGGTACCGTGAGGATCT+GGG | + | chr4.2:576375-576394 | MS.gene62618:CDS | 55.0% |
| ! | TCAGGTACCGTGAGGATCTG+GGG | + | chr4.2:576376-576395 | MS.gene62618:CDS | 55.0% |
| ! | TGTCAGGTACCGTGAGGATC+TGG | + | chr4.2:576374-576393 | MS.gene62618:CDS | 55.0% |
| !! | GGGGAGGGCTCTGAAGATAA+AGG | - | chr4.2:580133-580152 | None:intergenic | 55.0% |
| AGAGTTTGGAGGGAGGGGAG+GGG | - | chr4.2:580152-580171 | None:intergenic | 60.0% | |
| CCACGGCCACGTTCTGTTGA+AGG | - | chr4.2:576181-576200 | None:intergenic | 60.0% | |
| CCTTCAACAGAACGTGGCCG+TGG | + | chr4.2:576178-576197 | MS.gene62618:CDS | 60.0% | |
| GAAAATCGAGCGACGGTGGC+AGG | - | chr4.2:576322-576341 | None:intergenic | 60.0% | |
| GAGAGTTTGGAGGGAGGGGA+GGG | - | chr4.2:580153-580172 | None:intergenic | 60.0% | |
| GAGGAAAACAGTGGGAGGGG+AGG | + | chr4.2:579842-579861 | MS.gene62618:intron | 60.0% | |
| GCGAGTTCCCCAGATCCTCA+CGG | - | chr4.2:576386-576405 | None:intergenic | 60.0% | |
| GGGTGAAAATCGAGCGACGG+TGG | - | chr4.2:576326-576345 | None:intergenic | 60.0% | |
| TGAGAGTTTGGAGGGAGGGG+AGG | - | chr4.2:580154-580173 | None:intergenic | 60.0% | |
| ! | CTGACGTGTCAGGTACCGTG+AGG | + | chr4.2:576368-576387 | MS.gene62618:CDS | 60.0% |
| TTTGGAGGGAGGGGAGGGGA+GGG | - | chr4.2:580148-580167 | None:intergenic | 65.0% | |
| GTTTGGAGGGAGGGGAGGGG+AGG | - | chr4.2:580149-580168 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 576139 | 582583 | 576139 | ID=MS.gene62618 |
| chr4.2 | mRNA | 576139 | 582583 | 576139 | ID=MS.gene62618.t1;Parent=MS.gene62618 |
| chr4.2 | exon | 576139 | 576536 | 576139 | ID=MS.gene62618.t1.exon1;Parent=MS.gene62618.t1 |
| chr4.2 | CDS | 576139 | 576536 | 576139 | ID=cds.MS.gene62618.t1;Parent=MS.gene62618.t1 |
| chr4.2 | exon | 577106 | 577267 | 577106 | ID=MS.gene62618.t1.exon2;Parent=MS.gene62618.t1 |
| chr4.2 | CDS | 577106 | 577267 | 577106 | ID=cds.MS.gene62618.t1;Parent=MS.gene62618.t1 |
| chr4.2 | exon | 579046 | 579232 | 579046 | ID=MS.gene62618.t1.exon3;Parent=MS.gene62618.t1 |
| chr4.2 | CDS | 579046 | 579232 | 579046 | ID=cds.MS.gene62618.t1;Parent=MS.gene62618.t1 |
| chr4.2 | exon | 580375 | 580797 | 580375 | ID=MS.gene62618.t1.exon4;Parent=MS.gene62618.t1 |
| chr4.2 | CDS | 580375 | 580797 | 580375 | ID=cds.MS.gene62618.t1;Parent=MS.gene62618.t1 |
| chr4.2 | exon | 581586 | 581993 | 581586 | ID=MS.gene62618.t1.exon5;Parent=MS.gene62618.t1 |
| chr4.2 | CDS | 581586 | 581993 | 581586 | ID=cds.MS.gene62618.t1;Parent=MS.gene62618.t1 |
| chr4.2 | exon | 582326 | 582583 | 582326 | ID=MS.gene62618.t1.exon6;Parent=MS.gene62618.t1 |
| chr4.2 | CDS | 582326 | 582583 | 582326 | ID=cds.MS.gene62618.t1;Parent=MS.gene62618.t1 |
| Gene Sequence |
| Protein sequence |
