Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040149.t1 | XP_003631073.1 | 98.2 | 610 | 11 | 0 | 1 | 610 | 1 | 610 | 0.00E+00 | 1120.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040149.t1 | Q9LV35 | 75.2 | 608 | 150 | 1 | 4 | 610 | 1 | 608 | 2.8e-252 | 872.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040149.t1 | Q1SN19 | 98.2 | 610 | 11 | 0 | 1 | 610 | 1 | 610 | 0.0e+00 | 1120.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene040149 | MS.gene80320 | PPI |
| MS.gene061659 | MS.gene040149 | PPI |
| MS.gene042491 | MS.gene040149 | PPI |
| MS.gene033840 | MS.gene040149 | PPI |
| MS.gene040149 | MS.gene020596 | PPI |
| MS.gene040149 | MS.gene048963 | PPI |
| MS.gene007355 | MS.gene040149 | PPI |
| MS.gene49831 | MS.gene040149 | PPI |
| MS.gene06110 | MS.gene040149 | PPI |
| MS.gene040149 | MS.gene026418 | PPI |
| MS.gene007592 | MS.gene040149 | PPI |
| MS.gene040852 | MS.gene040149 | PPI |
| MS.gene20209 | MS.gene040149 | PPI |
| MS.gene040149 | MS.gene41795 | PPI |
| MS.gene040149 | MS.gene22354 | PPI |
| MS.gene040149 | MS.gene069541 | PPI |
| MS.gene061041 | MS.gene040149 | PPI |
| MS.gene040149 | MS.gene47297 | PPI |
| MS.gene040149 | MS.gene55829 | PPI |
| MS.gene040149 | MS.gene08137 | PPI |
| MS.gene75846 | MS.gene040149 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040149.t1 | MTR_8g106820 | 98.197 | 610 | 11 | 0 | 1 | 610 | 1 | 610 | 0.0 | 1224 |
| MS.gene040149.t1 | MTR_1g107560 | 72.968 | 603 | 163 | 0 | 6 | 608 | 4 | 606 | 0.0 | 931 |
| MS.gene040149.t1 | MTR_1g054300 | 37.273 | 110 | 61 | 3 | 158 | 264 | 337 | 441 | 1.44e-12 | 70.5 |
| MS.gene040149.t1 | MTR_3g449990 | 24.302 | 358 | 216 | 13 | 179 | 531 | 259 | 566 | 1.45e-11 | 67.8 |
| MS.gene040149.t1 | MTR_1g072140 | 22.989 | 348 | 211 | 13 | 179 | 520 | 16 | 312 | 8.12e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040149.t1 | AT3G18060 | 75.000 | 608 | 151 | 1 | 4 | 610 | 1 | 608 | 0.0 | 958 |
| MS.gene040149.t1 | AT2G01330 | 67.323 | 609 | 195 | 4 | 5 | 610 | 3 | 610 | 0.0 | 862 |
| MS.gene040149.t1 | AT5G52820 | 22.738 | 431 | 281 | 13 | 148 | 564 | 80 | 472 | 7.83e-13 | 71.6 |
| MS.gene040149.t1 | AT2G43770 | 26.174 | 298 | 199 | 10 | 58 | 348 | 52 | 335 | 9.65e-12 | 67.4 |
| MS.gene040149.t1 | AT5G67320 | 23.967 | 242 | 161 | 8 | 52 | 284 | 358 | 585 | 2.14e-11 | 67.4 |
| MS.gene040149.t1 | AT4G02730 | 24.138 | 348 | 203 | 12 | 51 | 392 | 35 | 327 | 7.56e-11 | 64.3 |
Find 162 sgRNAs with CRISPR-Local
Find 405 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCACTTAGGTGGGGTTTA+TGG | 0.082114 | 4.4:+595522 | MS.gene040149:CDS |
| AAGGAGTTTCGTGTTCTTTC+TGG | 0.122384 | 4.4:+589491 | MS.gene040149:CDS |
| CTGCACATATATTCTATTTC+TGG | 0.164431 | 4.4:+594875 | MS.gene040149:CDS |
| ACCTAAGTGAGCACCCTTTA+TGG | 0.179066 | 4.4:-595511 | None:intergenic |
| CTCACTTAGGTGGGGTTTAT+GGG | 0.206529 | 4.4:+595523 | MS.gene040149:CDS |
| AACCGTTAGTTCTGACAAAA+AGG | 0.227495 | 4.4:+592146 | MS.gene040149:CDS |
| GTTCTAGTTTCAATTGATTC+AGG | 0.254254 | 4.4:+594734 | MS.gene040149:CDS |
| GCAATGGATAGGTGGGATTC+TGG | 0.264908 | 4.4:+590140 | MS.gene040149:intron |
| GTAGCAATCCTACTGCTATC+AGG | 0.285417 | 4.4:-595426 | None:intergenic |
| CTGACAAGTCTGCAAAAGTA+TGG | 0.313171 | 4.4:+593434 | MS.gene040149:CDS |
| CCCCTTCATGTCTCCGTCTA+TGG | 0.323756 | 4.4:+589350 | MS.gene040149:CDS |
| ACCATCCTGACCACCAATAA+TGG | 0.326504 | 4.4:-594849 | None:intergenic |
| TGTCAGGTACCGTGAGGATC+TGG | 0.337070 | 4.4:+589441 | MS.gene040149:CDS |
| GTTGTGTCAATCATTAATCT+TGG | 0.338589 | 4.4:+594782 | MS.gene040149:CDS |
| GTAGGTGATGGTGTTGGATT+TGG | 0.348835 | 4.4:-589288 | None:intergenic |
| ATTCACTGATGAATATAGTT+TGG | 0.351324 | 4.4:+595551 | MS.gene040149:CDS |
| GAAAATCGAGCGACGGTGGC+AGG | 0.372098 | 4.4:-589386 | None:intergenic |
| CAGCATAAATACTGCCAGTA+TGG | 0.381490 | 4.4:-592227 | None:intergenic |
| GGCTAATAGAAATACCATAA+AGG | 0.390095 | 4.4:+595497 | MS.gene040149:CDS |
| AGGAGTTTCGTGTTCTTTCT+GGG | 0.399988 | 4.4:+589492 | MS.gene040149:CDS |
| TATCTTGTCACTGTTTCTCT+TGG | 0.401428 | 4.4:+593559 | MS.gene040149:CDS |
| CTTGTCACTGTTTCTCTTGG+TGG | 0.406048 | 4.4:+593562 | MS.gene040149:CDS |
| GAAGAAGAGATTGTTATGTC+TGG | 0.410474 | 4.4:+593805 | MS.gene040149:CDS |
| TCTTCTGAAGGTGGCCATAC+TGG | 0.414349 | 4.4:+592213 | MS.gene040149:CDS |
| ATTGAAACTAGAACAAGTTC+AGG | 0.414746 | 4.4:-594725 | None:intergenic |
| GCTAATAGAAATACCATAAA+GGG | 0.416716 | 4.4:+595498 | MS.gene040149:CDS |
| TAATCGAGAAGCTGTTGTTT+GGG | 0.419514 | 4.4:+594997 | MS.gene040149:CDS |
| TTAATCGAGAAGCTGTTGTT+TGG | 0.423105 | 4.4:+594996 | MS.gene040149:CDS |
| ACATTGATTTGTTCTGCCTC+TGG | 0.424474 | 4.4:+593493 | MS.gene040149:CDS |
| GATGCTGAAGCCATTGATAT+CGG | 0.426975 | 4.4:+594665 | MS.gene040149:CDS |
| CTCCTGTCTTGTAGTTATGA+TGG | 0.428145 | 4.4:+593694 | MS.gene040149:CDS |
| GACAATTTATCCGTGCAGTA+TGG | 0.435214 | 4.4:-595392 | None:intergenic |
| CAATGGATAGGTGGGATTCT+GGG | 0.435336 | 4.4:+590141 | MS.gene040149:intron |
| CTCTTCTTCTGCAGCTGCTA+AGG | 0.435458 | 4.4:-593791 | None:intergenic |
| CTACAAGACAGGAGCACTCT+AGG | 0.437677 | 4.4:-593685 | None:intergenic |
| GATGAGCTCGGTGGAGTTGA+CGG | 0.438057 | 4.4:+589205 | None:intergenic |
| CGAGATTGCTTAAATCTAAA+GGG | 0.439758 | 4.4:-590287 | None:intergenic |
| GGTATCAGAATTGTCGCTTC+TGG | 0.440339 | 4.4:+589545 | MS.gene040149:CDS |
| CACGGATAAATTGTCTTGCT+TGG | 0.442191 | 4.4:+595400 | MS.gene040149:CDS |
| TGAAGCCATTATTGGTGGTC+AGG | 0.444420 | 4.4:+594844 | MS.gene040149:CDS |
| AGTGCAACACTAAAATCCTT+TGG | 0.445789 | 4.4:-594695 | None:intergenic |
| GTTACAAATTTACTGCCATC+TGG | 0.447597 | 4.4:-592126 | None:intergenic |
| GATGGAAGTGAAGCCATTAT+TGG | 0.448281 | 4.4:+594836 | MS.gene040149:CDS |
| TATGTCCTGAAAACGATGTC+GGG | 0.452600 | 4.4:-593624 | None:intergenic |
| TTAATAGTTAAGTGGATTCA+AGG | 0.455728 | 4.4:+593718 | MS.gene040149:CDS |
| TTGTCACTGTTTCTCTTGGT+GGG | 0.456402 | 4.4:+593563 | MS.gene040149:CDS |
| GCGAGATTGCTTAAATCTAA+AGG | 0.459551 | 4.4:-590288 | None:intergenic |
| GTTAAGTGGATTCAAGGGAT+TGG | 0.468346 | 4.4:+593724 | MS.gene040149:CDS |
| GTCAGGTACCGTGAGGATCT+GGG | 0.468616 | 4.4:+589442 | MS.gene040149:CDS |
| GAATATAGTTTGGTTAGCTC+AGG | 0.471315 | 4.4:+595561 | MS.gene040149:CDS |
| ACTAATGTTGGTGAATTTGA+TGG | 0.472283 | 4.4:+590164 | MS.gene040149:CDS |
| CGCCATAGACGGAGACATGA+AGG | 0.472952 | 4.4:-589352 | None:intergenic |
| TAATCTTGGATTTACTGTTA+CGG | 0.474705 | 4.4:+594796 | MS.gene040149:CDS |
| CCACGGCCACGTTCTGTTGA+AGG | 0.475561 | 4.4:-589245 | None:intergenic |
| ATAAGGCGGGTTTCTTTACA+TGG | 0.476069 | 4.4:+594629 | MS.gene040149:CDS |
| GCATCTGTTGTCTCGTCTGA+TGG | 0.480001 | 4.4:+594818 | MS.gene040149:CDS |
| GCAGTATTTATGCTGTTAGC+TGG | 0.481308 | 4.4:+592235 | MS.gene040149:CDS |
| ATCATATTCGATGGAAAGAC+TGG | 0.482024 | 4.4:+592171 | MS.gene040149:CDS |
| GACATATCTGAGGATAATAG+TGG | 0.491671 | 4.4:+593457 | MS.gene040149:CDS |
| TTGATTTGTTCTGCCTCTGG+TGG | 0.491775 | 4.4:+593496 | MS.gene040149:CDS |
| GGAGTTGAAGACATGCTTGT+AGG | 0.493315 | 4.4:+593517 | MS.gene040149:CDS |
| ATTCATCATGATAACCGATC+TGG | 0.494504 | 4.4:-589318 | None:intergenic |
| AGACTGTCCTTGAGAAACAT+AGG | 0.495310 | 4.4:+594915 | MS.gene040149:CDS |
| GTTGCATCTGCTGACGTGTC+AGG | 0.496526 | 4.4:+589425 | MS.gene040149:CDS |
| ACAATGCGAAAAGGCCTTGT+CGG | 0.500058 | 4.4:-590221 | None:intergenic |
| GCCATTATTGGTGGTCAGGA+TGG | 0.505715 | 4.4:+594848 | MS.gene040149:CDS |
| ATGATGGCTTAATAGTTAAG+TGG | 0.506182 | 4.4:+593710 | MS.gene040149:CDS |
| GATGCAACCCATTCACCGTT+GGG | 0.506443 | 4.4:-589410 | None:intergenic |
| ACGTTCTGTTGAAGGCGTGC+AGG | 0.508737 | 4.4:-589237 | None:intergenic |
| CTTGGTCCCCTGATAGCAGT+AGG | 0.509910 | 4.4:+595418 | MS.gene040149:CDS |
| TAGCAATCCTACTGCTATCA+GGG | 0.510406 | 4.4:-595425 | None:intergenic |
| ATGGTATTTCTATTAGCCAC+AGG | 0.512733 | 4.4:-595492 | None:intergenic |
| CATGATAACCGATCTGGCAT+TGG | 0.515012 | 4.4:-589312 | None:intergenic |
| CCACAGGTGACAATGCGAAA+AGG | 0.517474 | 4.4:-590230 | None:intergenic |
| GGCCGTGGTATTCTCATCTC+CGG | 0.518010 | 4.4:+589260 | MS.gene040149:CDS |
| GTCGCTTCTGGTGAAGCTAA+AGG | 0.520427 | 4.4:+589557 | MS.gene040149:CDS |
| TGGTTGACTTCCGATATCAA+TGG | 0.521473 | 4.4:-594675 | None:intergenic |
| GACTGTCCTTGAGAAACATA+GGG | 0.523830 | 4.4:+594916 | MS.gene040149:CDS |
| TCTCTCTTTCAAGATGAGCT+CGG | 0.527575 | 4.4:+589193 | None:intergenic |
| TAAAGGGTGCTCACTTAGGT+GGG | 0.536033 | 4.4:+595514 | MS.gene040149:CDS |
| TTCTGTCAACTAGATAAGGC+GGG | 0.537021 | 4.4:+594616 | MS.gene040149:intron |
| AGATGCAACCCATTCACCGT+TGG | 0.537671 | 4.4:-589411 | None:intergenic |
| GAGTTGAAGACATGCTTGTA+GGG | 0.539058 | 4.4:+593518 | MS.gene040149:CDS |
| GCGACAATTCTGATACCATC+AGG | 0.539289 | 4.4:-589539 | None:intergenic |
| GATAGCAGTAGGATTGCTAC+AGG | 0.543234 | 4.4:+595429 | MS.gene040149:CDS |
| TACAAGACAGGAGCACTCTA+GGG | 0.546231 | 4.4:-593684 | None:intergenic |
| TACTCACATCTCGGGAGGCA+CGG | 0.546800 | 4.4:-595021 | None:intergenic |
| GCTGTTAGCTGGAGTCCTGA+TGG | 0.548585 | 4.4:+592246 | MS.gene040149:CDS |
| TACAACTTGATCTTCACGAA+GGG | 0.550920 | 4.4:-595617 | None:intergenic |
| AGTACTAGTACTCACATCTC+GGG | 0.551436 | 4.4:-595029 | None:intergenic |
| TAGCGGTAAATTACAAAGGA+AGG | 0.551726 | 4.4:+593750 | MS.gene040149:CDS |
| AGCCATCATAACTACAAGAC+AGG | 0.557501 | 4.4:-593696 | None:intergenic |
| GTAAGCATGTTCGCCATAGA+CGG | 0.558880 | 4.4:-589363 | None:intergenic |
| CACCTACACCAATGCCAGAT+CGG | 0.562580 | 4.4:+589304 | MS.gene040149:CDS |
| ACCATAAAGGGTGCTCACTT+AGG | 0.564151 | 4.4:+595510 | MS.gene040149:CDS |
| ATTGGTGTAGGTGATGGTGT+TGG | 0.567354 | 4.4:-589294 | None:intergenic |
| ATAAAGGGTGCTCACTTAGG+TGG | 0.568101 | 4.4:+595513 | MS.gene040149:CDS |
| GGTGTTGGATTTGGAGTCGC+CGG | 0.568267 | 4.4:-589279 | None:intergenic |
| TGGGATTCTGGGACTAATGT+TGG | 0.568712 | 4.4:+590152 | MS.gene040149:CDS |
| TCGCATTGTCACCTGTGGAG+AGG | 0.571600 | 4.4:+590235 | MS.gene040149:CDS |
| TAATAGTTAAGTGGATTCAA+GGG | 0.572072 | 4.4:+593719 | MS.gene040149:CDS |
| ATATGTCCTGAAAACGATGT+CGG | 0.572109 | 4.4:-593625 | None:intergenic |
| CCTTCAACAGAACGTGGCCG+TGG | 0.572710 | 4.4:+589245 | MS.gene040149:CDS |
| TCTAGGGTTACTTCTGAGAA+TGG | 0.573381 | 4.4:-593668 | None:intergenic |
| CAAGATAATCGTTCAACCAC+AGG | 0.574023 | 4.4:-593543 | None:intergenic |
| GACAAGAAAATCCTCTCCAC+AGG | 0.576600 | 4.4:-590246 | None:intergenic |
| ATCGGTGAGTTATCTTCTGA+AGG | 0.580609 | 4.4:+592201 | MS.gene040149:CDS |
| AACTCAAAACTCGTCTTGAG+TGG | 0.584201 | 4.4:-590187 | None:intergenic |
| GATCTTCAGTGGTCTCCTGA+TGG | 0.585210 | 4.4:+589524 | MS.gene040149:CDS |
| ACATGCTTGTAGGGTGCCTG+TGG | 0.597201 | 4.4:+593527 | MS.gene040149:CDS |
| TGACAAGTCTGCAAAAGTAT+GGG | 0.598045 | 4.4:+593435 | MS.gene040149:CDS |
| GCCATAGACGGAGACATGAA+GGG | 0.598923 | 4.4:-589351 | None:intergenic |
| AAAATCGAGCGACGGTGGCA+GGG | 0.599251 | 4.4:-589385 | None:intergenic |
| GGAAAGACTGGAGAGAAGAT+CGG | 0.599432 | 4.4:+592183 | MS.gene040149:CDS |
| CTTCTGTCAACTAGATAAGG+CGG | 0.601647 | 4.4:+594615 | MS.gene040149:intron |
| ATCTGAGGATAATAGTGGGA+AGG | 0.606291 | 4.4:+593462 | MS.gene040149:CDS |
| CTCTTTCAAGATGAGCTCGG+TGG | 0.606493 | 4.4:+589196 | None:intergenic |
| TATTTCTATTAGCCACAGGT+TGG | 0.608800 | 4.4:-595488 | None:intergenic |
| AAAGGGTGCTCACTTAGGTG+GGG | 0.609702 | 4.4:+595515 | MS.gene040149:CDS |
| TAGCACCCCTATGTTTCTCA+AGG | 0.610582 | 4.4:-594922 | None:intergenic |
| AAGGCGGGTTTCTTTACATG+GGG | 0.611641 | 4.4:+594631 | MS.gene040149:CDS |
| TCTGGCATTGGTGTAGGTGA+TGG | 0.618379 | 4.4:-589300 | None:intergenic |
| GATATAGCGGTAAATTACAA+AGG | 0.618475 | 4.4:+593746 | MS.gene040149:CDS |
| TAAGGCGGGTTTCTTTACAT+GGG | 0.618983 | 4.4:+594630 | MS.gene040149:CDS |
| TGTGTGAGATATTCTCCAGA+TGG | 0.622541 | 4.4:+592111 | MS.gene040149:CDS |
| TAGTTTGGTTAGCTCAGGCG+AGG | 0.625931 | 4.4:+595566 | MS.gene040149:CDS |
| ACAACTTGATCTTCACGAAG+GGG | 0.626345 | 4.4:-595616 | None:intergenic |
| GGGTGAAAATCGAGCGACGG+TGG | 0.626749 | 4.4:-589390 | None:intergenic |
| TCAGGTACCGTGAGGATCTG+GGG | 0.627630 | 4.4:+589443 | MS.gene040149:CDS |
| TTAGATTTAAGCAATCTCGC+AGG | 0.628883 | 4.4:+590291 | MS.gene040149:CDS |
| GTTACTTCTGAGAATGGTCA+AGG | 0.629931 | 4.4:-593662 | None:intergenic |
| CCATAGACGGAGACATGAAG+GGG | 0.633505 | 4.4:-589350 | None:intergenic |
| ACATATCTGAGGATAATAGT+GGG | 0.634727 | 4.4:+593458 | MS.gene040149:CDS |
| GGAGGATCGATGATCTTCAG+TGG | 0.636836 | 4.4:+589513 | MS.gene040149:CDS |
| ATACATAAAAGCGCGAACAA+AGG | 0.644313 | 4.4:-589585 | None:intergenic |
| TGATATCGGAAGTCAACCAA+AGG | 0.651151 | 4.4:+594679 | MS.gene040149:CDS |
| ATGTCCTGAAAACGATGTCG+GGG | 0.652427 | 4.4:-593623 | None:intergenic |
| CATGTCTTCAACTCCACCAG+AGG | 0.652652 | 4.4:-593509 | None:intergenic |
| GCGAGTTCCCCAGATCCTCA+CGG | 0.657058 | 4.4:-589450 | None:intergenic |
| AAAAGTATGGGACATATCTG+AGG | 0.658576 | 4.4:+593447 | MS.gene040149:CDS |
| GGTGAGTTATCTTCTGAAGG+TGG | 0.661525 | 4.4:+592204 | MS.gene040149:CDS |
| GGAAGTGAAGCCATTATTGG+TGG | 0.661612 | 4.4:+594839 | MS.gene040149:CDS |
| ACATGCTGTACCATACTGCA+CGG | 0.663929 | 4.4:+595382 | MS.gene040149:CDS |
| AACCGATCTGGCATTGGTGT+AGG | 0.664335 | 4.4:-589306 | None:intergenic |
| AGTTTCGTGTTCTTTCTGGG+AGG | 0.677626 | 4.4:+589495 | MS.gene040149:CDS |
| TGCACGCCTTCAACAGAACG+TGG | 0.678162 | 4.4:+589239 | MS.gene040149:CDS |
| TTACAACTTGATCTTCACGA+AGG | 0.680161 | 4.4:-595618 | None:intergenic |
| TCTTTACATGGGGATCAGTG+CGG | 0.680969 | 4.4:+594641 | MS.gene040149:CDS |
| ATATGAGATTGACCAACCTG+TGG | 0.696248 | 4.4:+595476 | MS.gene040149:CDS |
| TCAGGAGTTGTCATGCTGCG+TGG | 0.701235 | 4.4:+594752 | MS.gene040149:CDS |
| ATTCAAGGGATTGGATATAG+CGG | 0.701405 | 4.4:+593733 | MS.gene040149:CDS |
| GTTGGGTGAAAATCGAGCGA+CGG | 0.702331 | 4.4:-589393 | None:intergenic |
| GTTGTGCTTATAAACCGACA+AGG | 0.704502 | 4.4:+590207 | MS.gene040149:CDS |
| GATTGCTTAAATCTAAAGGG+AGG | 0.704673 | 4.4:-590284 | None:intergenic |
| ACTAGTACTCACATCTCGGG+AGG | 0.705295 | 4.4:-595026 | None:intergenic |
| AAGGGGTTATCTTCCAGACA+CGG | 0.708079 | 4.4:-595599 | None:intergenic |
| ACTTCTGAGAATGGTCAAGG+AGG | 0.709587 | 4.4:-593659 | None:intergenic |
| CTGACGTGTCAGGTACCGTG+AGG | 0.722749 | 4.4:+589435 | MS.gene040149:CDS |
| AGCAATCCTACTGCTATCAG+GGG | 0.726822 | 4.4:-595424 | None:intergenic |
| ACTGTCCTTGAGAAACATAG+GGG | 0.726823 | 4.4:+594917 | MS.gene040149:CDS |
| CGCCGGAGATGAGAATACCA+CGG | 0.738636 | 4.4:-589262 | None:intergenic |
| CATAGACGGAGACATGAAGG+GGG | 0.769626 | 4.4:-589349 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATGAAATTAATTATATT+GGG | - | chr4.4:594322-594341 | None:intergenic | 10.0% |
| !! | TATATATATATATATAGGAT+AGG | + | chr4.4:589663-589682 | MS.gene040149:intron | 10.0% |
| !! | TCAAATGAAATTAATTATAT+TGG | - | chr4.4:594323-594342 | None:intergenic | 10.0% |
| !!! | TTGATTTTAAAATTTCAAAT+AGG | - | chr4.4:592768-592787 | None:intergenic | 10.0% |
| !! | AATTAAATTAACTAAGTTGT+TGG | - | chr4.4:590950-590969 | None:intergenic | 15.0% |
| !! | ATAATACTTTCGTTATTTAA+AGG | - | chr4.4:595265-595284 | None:intergenic | 15.0% |
| !!! | AAATTAATCAGTTAGTTTTA+TGG | - | chr4.4:591267-591286 | None:intergenic | 15.0% |
| !!! | ATGTTATAAGTTGTTTTTAT+AGG | + | chr4.4:589950-589969 | MS.gene040149:intron | 15.0% |
| !!! | GATAAAACATAAAAAGTATA+TGG | - | chr4.4:590581-590600 | None:intergenic | 15.0% |
| !!! | GTATTAATTAATTTTAAGTG+AGG | - | chr4.4:591810-591829 | None:intergenic | 15.0% |
| !!! | TAATTAGACACATATTTTTA+AGG | - | chr4.4:590528-590547 | None:intergenic | 15.0% |
| !!! | TGAGTATTTTTTATTGATTA+TGG | + | chr4.4:592289-592308 | MS.gene040149:intron | 15.0% |
| !!! | TGGTTTTATAAATTATAGAT+AGG | - | chr4.4:590904-590923 | None:intergenic | 15.0% |
| !!! | TTTTGCAATTAAAATGAAAA+AGG | + | chr4.4:595216-595235 | MS.gene040149:intron | 15.0% |
| !! | AATAAGTGTTTATACATGAT+AGG | - | chr4.4:589828-589847 | None:intergenic | 20.0% |
| !! | AATTACTACTGCTTATTTAA+TGG | - | chr4.4:594080-594099 | None:intergenic | 20.0% |
| !! | ACTAAAAACTAAGAAATATG+TGG | + | chr4.4:592423-592442 | MS.gene040149:intron | 20.0% |
| !! | AGAATAATAAATCTCATTCA+AGG | + | chr4.4:593112-593131 | MS.gene040149:intron | 20.0% |
| !! | ATATTATAAGTTAGCAATTG+AGG | + | chr4.4:594428-594447 | MS.gene040149:intron | 20.0% |
| !! | ATTACTACTGCTTATTTAAT+GGG | - | chr4.4:594079-594098 | None:intergenic | 20.0% |
| !! | ATTGCTAACTTATAATATCT+TGG | - | chr4.4:594426-594445 | None:intergenic | 20.0% |
| !! | TAAATGAGAATATTGATCTT+TGG | - | chr4.4:591073-591092 | None:intergenic | 20.0% |
| !! | TGAGATTTATTATTCTACAT+TGG | - | chr4.4:593108-593127 | None:intergenic | 20.0% |
| !! | TGTTATCTATTGAAGTATAT+TGG | + | chr4.4:594007-594026 | MS.gene040149:intron | 20.0% |
| !! | TTGCTAACTTATAATATCTT+GGG | - | chr4.4:594425-594444 | None:intergenic | 20.0% |
| !! | TTTGAAAGAAAAGAAAAGAA+AGG | - | chr4.4:589621-589640 | None:intergenic | 20.0% |
| !! | TTTGTTTATCCAAATCAAAT+TGG | - | chr4.4:593919-593938 | None:intergenic | 20.0% |
| !!! | AAGACATTTTTCTTTATAGA+AGG | - | chr4.4:590603-590622 | None:intergenic | 20.0% |
| !!! | ACGATAATTTGTTTATGTAT+AGG | + | chr4.4:592067-592086 | MS.gene040149:intron | 20.0% |
| !!! | ATGTTTGAGTGAATATTTTT+TGG | + | chr4.4:590051-590070 | MS.gene040149:intron | 20.0% |
| !!! | ATTTAATTTCGATACTTTGT+TGG | - | chr4.4:594191-594210 | None:intergenic | 20.0% |
| !!! | CGATAATTTGTTTATGTATA+GGG | + | chr4.4:592068-592087 | MS.gene040149:intron | 20.0% |
| !!! | GATGAAATAAATCATTTTCT+CGG | + | chr4.4:593984-594003 | MS.gene040149:intron | 20.0% |
| !!! | TATTTTTTATTGATTATGGC+AGG | + | chr4.4:592293-592312 | MS.gene040149:intron | 20.0% |
| !!! | TTCATTTTAATTGCAAAACT+GGG | - | chr4.4:595214-595233 | None:intergenic | 20.0% |
| !!! | TTCTCATTTATTTTATAGCA+AGG | + | chr4.4:591083-591102 | MS.gene040149:intron | 20.0% |
| !!! | TTGATGAATTTTCAAAACAT+TGG | + | chr4.4:590625-590644 | MS.gene040149:intron | 20.0% |
| !!! | TTGCAGATATTTTTAAAATG+TGG | - | chr4.4:590752-590771 | None:intergenic | 20.0% |
| !!! | TTTCATTTTAATTGCAAAAC+TGG | - | chr4.4:595215-595234 | None:intergenic | 20.0% |
| !!! | TTTTTTAAATTATGCTCACT+TGG | - | chr4.4:591295-591314 | None:intergenic | 20.0% |
| ! | AAGCATCAAAATCAGATATA+GGG | - | chr4.4:590022-590041 | None:intergenic | 25.0% |
| ! | ACACTATCTTTGAACATAAA+GGG | - | chr4.4:591960-591979 | None:intergenic | 25.0% |
| ! | ACTAAAACTCTCCAATATAT+GGG | - | chr4.4:593085-593104 | None:intergenic | 25.0% |
| ! | ACTAACTTATGATCGTTATT+TGG | - | chr4.4:591664-591683 | None:intergenic | 25.0% |
| ! | ACTTGAATCATACATAAAGT+TGG | - | chr4.4:591109-591128 | None:intergenic | 25.0% |
| ! | ATAATAAATCTCATTCAAGG+TGG | + | chr4.4:593115-593134 | MS.gene040149:intron | 25.0% |
| ! | ATCAACATCATAGATTGAAA+AGG | - | chr4.4:592367-592386 | None:intergenic | 25.0% |
| ! | ATTCACTGATGAATATAGTT+TGG | + | chr4.4:595551-595570 | MS.gene040149:CDS | 25.0% |
| ! | ATTTATCAGACGAATGTAAT+AGG | - | chr4.4:592037-592056 | None:intergenic | 25.0% |
| ! | CACACTTCAAAAATCAAAAT+TGG | - | chr4.4:591507-591526 | None:intergenic | 25.0% |
| ! | CGAAAATCGTTTATAACTAA+TGG | + | chr4.4:594561-594580 | MS.gene040149:intron | 25.0% |
| ! | CGAGAAAAAAAAATGAGAAT+TGG | + | chr4.4:591047-591066 | MS.gene040149:intron | 25.0% |
| ! | CTATATCGTATTTCTTTAGT+TGG | + | chr4.4:590093-590112 | MS.gene040149:intron | 25.0% |
| ! | CTTTCATTTACAACTAATCA+TGG | + | chr4.4:589732-589751 | MS.gene040149:intron | 25.0% |
| ! | GAAATATGTGGTAAAGTAAA+AGG | + | chr4.4:592435-592454 | MS.gene040149:intron | 25.0% |
| ! | GAGAAATGTTTCGTATTAAT+TGG | - | chr4.4:594346-594365 | None:intergenic | 25.0% |
| ! | GCTAATAGAAATACCATAAA+GGG | + | chr4.4:595498-595517 | MS.gene040149:CDS | 25.0% |
| ! | GGAAATACAAAAATACTAAC+CGG | + | chr4.4:591694-591713 | MS.gene040149:intron | 25.0% |
| ! | TAATAAATCTCATTCAAGGT+GGG | + | chr4.4:593116-593135 | MS.gene040149:intron | 25.0% |
| ! | TAATCTTGGATTTACTGTTA+CGG | + | chr4.4:594796-594815 | MS.gene040149:CDS | 25.0% |
| ! | TACACTATCTTTGAACATAA+AGG | - | chr4.4:591961-591980 | None:intergenic | 25.0% |
| ! | TAGAAAAGTGAATATAAGTC+AGG | - | chr4.4:592639-592658 | None:intergenic | 25.0% |
| ! | TATATGTTCTTGAACAAAAC+CGG | - | chr4.4:595064-595083 | None:intergenic | 25.0% |
| ! | TCGATATATTACAAAATCTG+TGG | - | chr4.4:591030-591049 | None:intergenic | 25.0% |
| ! | TGAATTATCATTAGATGTCA+GGG | + | chr4.4:590776-590795 | MS.gene040149:intron | 25.0% |
| ! | TGATTTGAATGAATGATTCA+TGG | - | chr4.4:591334-591353 | None:intergenic | 25.0% |
| ! | TGCTTTCAAATATTACAAAC+AGG | + | chr4.4:595168-595187 | MS.gene040149:intron | 25.0% |
| ! | TTTCATATATGTTATTGTGC+AGG | + | chr4.4:595347-595366 | MS.gene040149:intron | 25.0% |
| !! | AAAGCATCAAAATCAGATAT+AGG | - | chr4.4:590023-590042 | None:intergenic | 25.0% |
| !! | ATGGCAATATGCAAAATTTT+GGG | - | chr4.4:590562-590581 | None:intergenic | 25.0% |
| !! | CATCTAGATAAACTATTTTC+AGG | - | chr4.4:589933-589952 | None:intergenic | 25.0% |
| !! | CTATTTTCTCCAATTTGATT+TGG | + | chr4.4:593907-593926 | MS.gene040149:intron | 25.0% |
| !! | TAATAGTTAAGTGGATTCAA+GGG | + | chr4.4:593719-593738 | MS.gene040149:CDS | 25.0% |
| !! | TATGGCAATATGCAAAATTT+TGG | - | chr4.4:590563-590582 | None:intergenic | 25.0% |
| !! | TTAATAGTTAAGTGGATTCA+AGG | + | chr4.4:593718-593737 | MS.gene040149:CDS | 25.0% |
| !! | TTTCTTGTCAACTTTTATGA+AGG | + | chr4.4:590260-590279 | MS.gene040149:CDS | 25.0% |
| !!! | ATATTTTTAAGGACATGCAA+GGG | - | chr4.4:590517-590536 | None:intergenic | 25.0% |
| !!! | ATTTTTCAATGTTTGCATCA+GGG | + | chr4.4:594969-594988 | MS.gene040149:CDS | 25.0% |
| !!! | GAGAATTCTTCACTTTTTTT+GGG | + | chr4.4:592921-592940 | MS.gene040149:intron | 25.0% |
| !!! | GTCACAACAATATTAGTTTT+TGG | - | chr4.4:594287-594306 | None:intergenic | 25.0% |
| !!! | TATGTCTGGTTTTGATAATA+AGG | + | chr4.4:593819-593838 | MS.gene040149:CDS | 25.0% |
| !!! | TCATTTTAACTTGTAGGTTA+TGG | + | chr4.4:592670-592689 | MS.gene040149:intron | 25.0% |
| !!! | TTAGATTTTGTTTGAGAGTT+TGG | - | chr4.4:593209-593228 | None:intergenic | 25.0% |
| AAATGACTAGTATAGCAAAG+GGG | - | chr4.4:593332-593351 | None:intergenic | 30.0% | |
| AATAAATCTCATTCAAGGTG+GGG | + | chr4.4:593117-593136 | MS.gene040149:intron | 30.0% | |
| AATCAGATATAGGGAATGTT+TGG | - | chr4.4:590013-590032 | None:intergenic | 30.0% | |
| ACATATCTGAGGATAATAGT+GGG | + | chr4.4:593458-593477 | MS.gene040149:CDS | 30.0% | |
| ACGAAACATTTCTCTCTATA+CGG | + | chr4.4:594352-594371 | MS.gene040149:intron | 30.0% | |
| AGAAATGACTAGTATAGCAA+AGG | - | chr4.4:593334-593353 | None:intergenic | 30.0% | |
| AGAGACAAATACGTGAAAAT+GGG | - | chr4.4:592336-592355 | None:intergenic | 30.0% | |
| ATAACAAAAGACACACACAT+AGG | + | chr4.4:591397-591416 | MS.gene040149:intron | 30.0% | |
| ATAAGAACAAACCAAAACAG+AGG | - | chr4.4:591999-592018 | None:intergenic | 30.0% | |
| ATAATATCTTGGGACTAAGA+AGG | - | chr4.4:594415-594434 | None:intergenic | 30.0% | |
| ATAGAAGTTATTCGAGCTAA+GGG | + | chr4.4:592533-592552 | MS.gene040149:intron | 30.0% | |
| ATATGTGTATGTCTTGAACT+GGG | - | chr4.4:591379-591398 | None:intergenic | 30.0% | |
| ATATTTAGCAATTAGTGTGC+GGG | + | chr4.4:594513-594532 | MS.gene040149:intron | 30.0% | |
| ATCATAGATTGAAAAGGAGA+TGG | - | chr4.4:592361-592380 | None:intergenic | 30.0% | |
| ATGATGGCTTAATAGTTAAG+TGG | + | chr4.4:593710-593729 | MS.gene040149:CDS | 30.0% | |
| ATTGAAACTAGAACAAGTTC+AGG | - | chr4.4:594728-594747 | None:intergenic | 30.0% | |
| CATTCATTACTAGATGAGTT+TGG | + | chr4.4:594260-594279 | MS.gene040149:intron | 30.0% | |
| CGAGATTGCTTAAATCTAAA+GGG | - | chr4.4:590290-590309 | None:intergenic | 30.0% | |
| CTGAATTATCATTAGATGTC+AGG | + | chr4.4:590775-590794 | MS.gene040149:intron | 30.0% | |
| CTGCACATATATTCTATTTC+TGG | + | chr4.4:594875-594894 | MS.gene040149:CDS | 30.0% | |
| CTTTGAACATAAAGGGAAAA+GGG | - | chr4.4:591953-591972 | None:intergenic | 30.0% | |
| GAAATGACTAGTATAGCAAA+GGG | - | chr4.4:593333-593352 | None:intergenic | 30.0% | |
| GACTAAAACTCTCCAATATA+TGG | - | chr4.4:593086-593105 | None:intergenic | 30.0% | |
| GATATAGCGGTAAATTACAA+AGG | + | chr4.4:593746-593765 | MS.gene040149:CDS | 30.0% | |
| GATATTTAGCAATTAGTGTG+CGG | + | chr4.4:594512-594531 | MS.gene040149:intron | 30.0% | |
| GATGCAAACATTGAAAAATC+TGG | - | chr4.4:594968-594987 | None:intergenic | 30.0% | |
| GGAGAGAAACTTATATAAGT+CGG | - | chr4.4:590440-590459 | None:intergenic | 30.0% | |
| GGCTAATAGAAATACCATAA+AGG | + | chr4.4:595497-595516 | MS.gene040149:CDS | 30.0% | |
| GTTGTGTCAATCATTAATCT+TGG | + | chr4.4:594782-594801 | MS.gene040149:CDS | 30.0% | |
| TAAAAATGTATATGACCGCA+CGG | - | chr4.4:590859-590878 | None:intergenic | 30.0% | |
| TATATGTGTATGTCTTGAAC+TGG | - | chr4.4:591380-591399 | None:intergenic | 30.0% | |
| TCAGTTGTAATGTTATCGTT+AGG | + | chr4.4:593396-593415 | MS.gene040149:intron | 30.0% | |
| TCTTTGAACATAAAGGGAAA+AGG | - | chr4.4:591954-591973 | None:intergenic | 30.0% | |
| TGAATGATTCATGGATACTT+TGG | - | chr4.4:591325-591344 | None:intergenic | 30.0% | |
| TGCATCTATGATATTCTAAC+CGG | - | chr4.4:591716-591735 | None:intergenic | 30.0% | |
| TTTGAACATAAAGGGAAAAG+GGG | - | chr4.4:591952-591971 | None:intergenic | 30.0% | |
| ! | ACTAATGTTGGTGAATTTGA+TGG | + | chr4.4:590164-590183 | MS.gene040149:CDS | 30.0% |
| ! | CACATTTTGAATGCAAACTA+TGG | + | chr4.4:592507-592526 | MS.gene040149:intron | 30.0% |
| ! | CATTGGTTGTTTGAGTTTAT+TGG | + | chr4.4:590642-590661 | MS.gene040149:intron | 30.0% |
| ! | CTTTTCATATTCCTCTGTTT+TGG | + | chr4.4:591985-592004 | MS.gene040149:intron | 30.0% |
| ! | GTTTTGCTTATACTCTTTGA+CGG | + | chr4.4:593847-593866 | MS.gene040149:intron | 30.0% |
| ! | TTTGGAGTTGATTCTTTCAA+AGG | - | chr4.4:591646-591665 | None:intergenic | 30.0% |
| !! | AAAAAGGGTATCATATTCGA+TGG | + | chr4.4:592162-592181 | MS.gene040149:CDS | 30.0% |
| !! | ATAACATTGATAGTGTAGTG+TGG | - | chr4.4:591450-591469 | None:intergenic | 30.0% |
| !! | ATTTTGTTTGAGAGTTTGGA+GGG | - | chr4.4:593205-593224 | None:intergenic | 30.0% |
| !! | CATATTTTTAAGGACATGCA+AGG | - | chr4.4:590518-590537 | None:intergenic | 30.0% |
| !! | GATTTTTCAATGTTTGCATC+AGG | + | chr4.4:594968-594987 | MS.gene040149:CDS | 30.0% |
| !! | GTTATGGTTTGTTTGTTATC+TGG | + | chr4.4:592686-592705 | MS.gene040149:intron | 30.0% |
| !! | GTTCTAGTTTCAATTGATTC+AGG | + | chr4.4:594734-594753 | MS.gene040149:CDS | 30.0% |
| !! | TACTAGTACTACTTTTGAAC+CGG | + | chr4.4:595042-595061 | MS.gene040149:intron | 30.0% |
| !! | TAGTGTGGTCTTTTGTTATA+TGG | - | chr4.4:591435-591454 | None:intergenic | 30.0% |
| !! | TGCTAGTTTACTGAGATTTT+TGG | + | chr4.4:592830-592849 | MS.gene040149:intron | 30.0% |
| !! | TTTGGGAGAATGTTTTTGAA+GGG | + | chr4.4:592938-592957 | MS.gene040149:intron | 30.0% |
| !! | TTTTGGGAGAATGTTTTTGA+AGG | + | chr4.4:592937-592956 | MS.gene040149:intron | 30.0% |
| !! | TTTTTACTGTACTGATGACA+CGG | - | chr4.4:591613-591632 | None:intergenic | 30.0% |
| !! | TTTTTCAATGTTTGCATCAG+GGG | + | chr4.4:594970-594989 | MS.gene040149:CDS | 30.0% |
| !!! | ATTTTTGGCATAACAGTCTA+AGG | + | chr4.4:592845-592864 | MS.gene040149:intron | 30.0% |
| !!! | CAATGAATTCGTTTTGAAGA+AGG | + | chr4.4:589472-589491 | MS.gene040149:CDS | 30.0% |
| !!! | GATTTGCACATTTGTTTTGA+AGG | - | chr4.4:590976-590995 | None:intergenic | 30.0% |
| !!! | GGAGAATTCTTCACTTTTTT+TGG | + | chr4.4:592920-592939 | MS.gene040149:intron | 30.0% |
| !!! | GTTATTTTTATAAGCTGTCC+AGG | - | chr4.4:589911-589930 | None:intergenic | 30.0% |
| !!! | TGTTTGTTATCTGGTCTTTT+GGG | + | chr4.4:592695-592714 | MS.gene040149:intron | 30.0% |
| !!! | TTGCTCTCATTTTAACTTGT+AGG | + | chr4.4:592664-592683 | MS.gene040149:intron | 30.0% |
| !!! | TTGTTTGTTATCTGGTCTTT+TGG | + | chr4.4:592694-592713 | MS.gene040149:intron | 30.0% |
| AAAAATGTATATGACCGCAC+GGG | - | chr4.4:590858-590877 | None:intergenic | 35.0% | |
| AAAGGAAATGAAGGAGTAAG+AGG | - | chr4.4:594593-594612 | None:intergenic | 35.0% | |
| AAGTGAGGATGATGTACAAT+CGG | - | chr4.4:591795-591814 | None:intergenic | 35.0% | |
| AATGACTAGTATAGCAAAGG+GGG | - | chr4.4:593331-593350 | None:intergenic | 35.0% | |
| AATTGCACCATGAAATTGGA+GGG | - | chr4.4:591547-591566 | None:intergenic | 35.0% | |
| AATTTCTGCAATGGATAGGT+GGG | + | chr4.4:590133-590152 | MS.gene040149:intron | 35.0% | |
| ACAGAAGAGAAAGGAAATGA+AGG | - | chr4.4:594602-594621 | None:intergenic | 35.0% | |
| ACGATCTAGTAAAGAGAAAG+GGG | - | chr4.4:590832-590851 | None:intergenic | 35.0% | |
| ACTGTGATCAATTTCTGCAA+TGG | + | chr4.4:590124-590143 | MS.gene040149:intron | 35.0% | |
| AGACGATCTAGTAAAGAGAA+AGG | - | chr4.4:590834-590853 | None:intergenic | 35.0% | |
| AGTGCAACACTAAAATCCTT+TGG | - | chr4.4:594698-594717 | None:intergenic | 35.0% | |
| ATAAATCTCATTCAAGGTGG+GGG | + | chr4.4:593118-593137 | MS.gene040149:intron | 35.0% | |
| ATATGTCCTGAAAACGATGT+CGG | - | chr4.4:593628-593647 | None:intergenic | 35.0% | |
| ATCATATTCGATGGAAAGAC+TGG | + | chr4.4:592171-592190 | MS.gene040149:CDS | 35.0% | |
| ATCATGGCTATGTCATTCTT+TGG | + | chr4.4:589748-589767 | MS.gene040149:intron | 35.0% | |
| ATCTAGTTGACAGAAGAGAA+AGG | - | chr4.4:594611-594630 | None:intergenic | 35.0% | |
| ATGCATGTCTTGATATTACG+TGG | + | chr4.4:594456-594475 | MS.gene040149:intron | 35.0% | |
| ATTAGATGTCAGGGTAAAAC+TGG | + | chr4.4:590785-590804 | MS.gene040149:intron | 35.0% | |
| ATTCAAGGGATTGGATATAG+CGG | + | chr4.4:593733-593752 | MS.gene040149:CDS | 35.0% | |
| ATTCATCATGATAACCGATC+TGG | - | chr4.4:589321-589340 | None:intergenic | 35.0% | |
| CAATTTCATGGTGCAATTCA+GGG | + | chr4.4:591549-591568 | MS.gene040149:intron | 35.0% | |
| CAGGAAACAAAGTGAAAACA+CGG | + | chr4.4:595187-595206 | MS.gene040149:intron | 35.0% | |
| CATAGAAGTTATTCGAGCTA+AGG | + | chr4.4:592532-592551 | MS.gene040149:intron | 35.0% | |
| CGAAACATTTCTCTCTATAC+GGG | + | chr4.4:594353-594372 | MS.gene040149:intron | 35.0% | |
| CTATGTCATTCTTTGGACTT+TGG | + | chr4.4:589755-589774 | MS.gene040149:intron | 35.0% | |
| GAAGAAGAGATTGTTATGTC+TGG | + | chr4.4:593805-593824 | MS.gene040149:CDS | 35.0% | |
| GAAGATAAAGGAGGAGTAAA+GGG | - | chr4.4:593164-593183 | None:intergenic | 35.0% | |
| GACATATCTGAGGATAATAG+TGG | + | chr4.4:593457-593476 | MS.gene040149:CDS | 35.0% | |
| GACGATCTAGTAAAGAGAAA+GGG | - | chr4.4:590833-590852 | None:intergenic | 35.0% | |
| GAGAGACAAATACGTGAAAA+TGG | - | chr4.4:592337-592356 | None:intergenic | 35.0% | |
| GATCAATTTCTGCAATGGAT+AGG | + | chr4.4:590129-590148 | MS.gene040149:intron | 35.0% | |
| GATTGCTTAAATCTAAAGGG+AGG | - | chr4.4:590287-590306 | None:intergenic | 35.0% | |
| GCGAGATTGCTTAAATCTAA+AGG | - | chr4.4:590291-590310 | None:intergenic | 35.0% | |
| GGATCCTTCTTGTATCATTA+CGG | + | chr4.4:591225-591244 | MS.gene040149:intron | 35.0% | |
| GTTACAAATTTACTGCCATC+TGG | - | chr4.4:592129-592148 | None:intergenic | 35.0% | |
| GTTCTCATTAGATGTTGTGT+TGG | - | chr4.4:590697-590716 | None:intergenic | 35.0% | |
| TAGCGGTAAATTACAAAGGA+AGG | + | chr4.4:593750-593769 | MS.gene040149:CDS | 35.0% | |
| TAGTACTAGTACTCACATCT+CGG | - | chr4.4:595033-595052 | None:intergenic | 35.0% | |
| TCATCCGTAATGATACAAGA+AGG | - | chr4.4:591232-591251 | None:intergenic | 35.0% | |
| TCGTTATTTAAAGGTCAGCT+TGG | - | chr4.4:595256-595275 | None:intergenic | 35.0% | |
| TCTCTTCTGTCAACTAGATA+AGG | + | chr4.4:594612-594631 | MS.gene040149:intron | 35.0% | |
| TGAAGATAAAGGAGGAGTAA+AGG | - | chr4.4:593165-593184 | None:intergenic | 35.0% | |
| TGAAGATCAGATGTCTAACA+GGG | - | chr4.4:593379-593398 | None:intergenic | 35.0% | |
| TGAATTCTCATTAGACGTCA+GGG | + | chr4.4:591897-591916 | MS.gene040149:intron | 35.0% | |
| TGATTCTTTCAAAGGACACA+AGG | - | chr4.4:591638-591657 | None:intergenic | 35.0% | |
| TTAAATGCAAACGACAAGCA+AGG | - | chr4.4:593946-593965 | None:intergenic | 35.0% | |
| TTAATCGAGAAGCTGTTGTT+TGG | + | chr4.4:594996-595015 | MS.gene040149:CDS | 35.0% | |
| TTAGATGTCAGGGTAAAACT+GGG | + | chr4.4:590786-590805 | MS.gene040149:intron | 35.0% | |
| TTAGATTTAAGCAATCTCGC+AGG | + | chr4.4:590291-590310 | MS.gene040149:CDS | 35.0% | |
| TTTCCCTTCACAAAAATGCA+TGG | - | chr4.4:590461-590480 | None:intergenic | 35.0% | |
| ! | AAAAGTATGGGACATATCTG+AGG | + | chr4.4:593447-593466 | MS.gene040149:CDS | 35.0% |
| ! | ACCCTTTTTGTCAGAACTAA+CGG | - | chr4.4:592151-592170 | None:intergenic | 35.0% |
| ! | ATACATAAAAGCGCGAACAA+AGG | - | chr4.4:589588-589607 | None:intergenic | 35.0% |
| ! | ATGGTATTTCTATTAGCCAC+AGG | - | chr4.4:595495-595514 | None:intergenic | 35.0% |
| ! | CATAAGTTAGTCTGTGATGA+AGG | + | chr4.4:591673-591692 | MS.gene040149:intron | 35.0% |
| ! | GAACTCCAAAAGTACATTGA+CGG | - | chr4.4:593063-593082 | None:intergenic | 35.0% |
| ! | GAATATAGTTTGGTTAGCTC+AGG | + | chr4.4:595561-595580 | MS.gene040149:CDS | 35.0% |
| ! | GTTGTTTGAGTTTATTGGAG+TGG | + | chr4.4:590647-590666 | MS.gene040149:intron | 35.0% |
| ! | TAATCGAGAAGCTGTTGTTT+GGG | + | chr4.4:594997-595016 | MS.gene040149:CDS | 35.0% |
| ! | TATCTTGTCACTGTTTCTCT+TGG | + | chr4.4:593559-593578 | MS.gene040149:CDS | 35.0% |
| ! | TATTTCTATTAGCCACAGGT+TGG | - | chr4.4:595491-595510 | None:intergenic | 35.0% |
| ! | TCTCCATGCATTTTTGTGAA+GGG | + | chr4.4:590455-590474 | MS.gene040149:intron | 35.0% |
| ! | TGACAAGTCTGCAAAAGTAT+GGG | + | chr4.4:593435-593454 | MS.gene040149:CDS | 35.0% |
| ! | TGATGTACAATCGGATTTTC+TGG | - | chr4.4:591786-591805 | None:intergenic | 35.0% |
| ! | TTTATTGATTATGGCAGGTC+TGG | + | chr4.4:592298-592317 | MS.gene040149:intron | 35.0% |
| ! | TTTGTTATATGGAGTGTACC+AGG | - | chr4.4:591424-591443 | None:intergenic | 35.0% |
| !! | AACCGTTAGTTCTGACAAAA+AGG | + | chr4.4:592146-592165 | MS.gene040149:CDS | 35.0% |
| !! | ACCGTTAGTTCTGACAAAAA+GGG | + | chr4.4:592147-592166 | MS.gene040149:CDS | 35.0% |
| !! | GATTTTGTTTGAGAGTTTGG+AGG | - | chr4.4:593206-593225 | None:intergenic | 35.0% |
| !! | GTTGTTTTCACAAGTTATCC+TGG | + | chr4.4:589890-589909 | MS.gene040149:intron | 35.0% |
| !! | TAGCTTACTTGTTTTCCATC+AGG | - | chr4.4:592264-592283 | None:intergenic | 35.0% |
| !! | TTTTACTGTACTGATGACAC+GGG | - | chr4.4:591612-591631 | None:intergenic | 35.0% |
| !!! | AACAGTCTAAGGCTTTGTTT+TGG | + | chr4.4:592856-592875 | MS.gene040149:intron | 35.0% |
| !!! | CTTTTGGAGTTCCCATATAT+TGG | + | chr4.4:593071-593090 | MS.gene040149:intron | 35.0% |
| !!! | TAAGGCTTTGTTTTGGAGTT+TGG | + | chr4.4:592863-592882 | MS.gene040149:intron | 35.0% |
| AACTCAAAACTCGTCTTGAG+TGG | - | chr4.4:590190-590209 | None:intergenic | 40.0% | |
| AAGGAGTTTCGTGTTCTTTC+TGG | + | chr4.4:589491-589510 | MS.gene040149:CDS | 40.0% | |
| ACTGTCCTTGAGAAACATAG+GGG | + | chr4.4:594917-594936 | MS.gene040149:CDS | 40.0% | |
| AGACTGTCCTTGAGAAACAT+AGG | + | chr4.4:594915-594934 | MS.gene040149:CDS | 40.0% | |
| AGCCATCATAACTACAAGAC+AGG | - | chr4.4:593699-593718 | None:intergenic | 40.0% | |
| AGGAGTTTCGTGTTCTTTCT+GGG | + | chr4.4:589492-589511 | MS.gene040149:CDS | 40.0% | |
| AGTACTAGTACTCACATCTC+GGG | - | chr4.4:595032-595051 | None:intergenic | 40.0% | |
| AGTGCTTCATGGAGATTTCT+AGG | - | chr4.4:594043-594062 | None:intergenic | 40.0% | |
| AGTTATTCGAGCTAAGGGAT+AGG | + | chr4.4:592538-592557 | MS.gene040149:intron | 40.0% | |
| ATAAAGGAGGAGTAAAGGGA+AGG | - | chr4.4:593160-593179 | None:intergenic | 40.0% | |
| ATATGAGATTGACCAACCTG+TGG | + | chr4.4:595476-595495 | MS.gene040149:CDS | 40.0% | |
| ATCGGTGAGTTATCTTCTGA+AGG | + | chr4.4:592201-592220 | MS.gene040149:CDS | 40.0% | |
| ATTAGACGTCAGGGTAAAAC+TGG | + | chr4.4:591906-591925 | MS.gene040149:intron | 40.0% | |
| ATTGCACCATGAAATTGGAG+GGG | - | chr4.4:591546-591565 | None:intergenic | 40.0% | |
| CAAGATAATCGTTCAACCAC+AGG | - | chr4.4:593546-593565 | None:intergenic | 40.0% | |
| CAATTTCTGCAATGGATAGG+TGG | + | chr4.4:590132-590151 | MS.gene040149:intron | 40.0% | |
| CACACGAGACAATTTCTGAT+TGG | + | chr4.4:594145-594164 | MS.gene040149:intron | 40.0% | |
| CACGGATAAATTGTCTTGCT+TGG | + | chr4.4:595400-595419 | MS.gene040149:CDS | 40.0% | |
| CAGCATAAATACTGCCAGTA+TGG | - | chr4.4:592230-592249 | None:intergenic | 40.0% | |
| CCAATTTCATGGTGCAATTC+AGG | + | chr4.4:591548-591567 | MS.gene040149:intron | 40.0% | |
| CCTGAATTGCACCATGAAAT+TGG | - | chr4.4:591551-591570 | None:intergenic | 40.0% | |
| CGATCTAGTAAAGAGAAAGG+GGG | - | chr4.4:590831-590850 | None:intergenic | 40.0% | |
| CTCCTGTCTTGTAGTTATGA+TGG | + | chr4.4:593694-593713 | MS.gene040149:CDS | 40.0% | |
| CTGAAGATCAGATGTCTAAC+AGG | - | chr4.4:593380-593399 | None:intergenic | 40.0% | |
| CTGAATTCTCATTAGACGTC+AGG | + | chr4.4:591896-591915 | MS.gene040149:intron | 40.0% | |
| CTGACAAGTCTGCAAAAGTA+TGG | + | chr4.4:593434-593453 | MS.gene040149:CDS | 40.0% | |
| CTTCTGTCAACTAGATAAGG+CGG | + | chr4.4:594615-594634 | MS.gene040149:intron | 40.0% | |
| GAATTGCACCATGAAATTGG+AGG | - | chr4.4:591548-591567 | None:intergenic | 40.0% | |
| GACAATTTATCCGTGCAGTA+TGG | - | chr4.4:595395-595414 | None:intergenic | 40.0% | |
| GACTGTCCTTGAGAAACATA+GGG | + | chr4.4:594916-594935 | MS.gene040149:CDS | 40.0% | |
| GAGTTGAAGACATGCTTGTA+GGG | + | chr4.4:593518-593537 | MS.gene040149:CDS | 40.0% | |
| GATGCTGAAGCCATTGATAT+CGG | + | chr4.4:594665-594684 | MS.gene040149:CDS | 40.0% | |
| GATGGAAGTGAAGCCATTAT+TGG | + | chr4.4:594836-594855 | MS.gene040149:CDS | 40.0% | |
| GCAGTATTTATGCTGTTAGC+TGG | + | chr4.4:592235-592254 | MS.gene040149:CDS | 40.0% | |
| GTATGGTGTGAGAAACTCAA+TGG | + | chr4.4:590313-590332 | MS.gene040149:intron | 40.0% | |
| GTTGTGCTTATAAACCGACA+AGG | + | chr4.4:590207-590226 | MS.gene040149:CDS | 40.0% | |
| TAAAGGAGGAGTAAAGGGAA+GGG | - | chr4.4:593159-593178 | None:intergenic | 40.0% | |
| TAGCAATCCTACTGCTATCA+GGG | - | chr4.4:595428-595447 | None:intergenic | 40.0% | |
| TATGTCCTGAAAACGATGTC+GGG | - | chr4.4:593627-593646 | None:intergenic | 40.0% | |
| TGATATCGGAAGTCAACCAA+AGG | + | chr4.4:594679-594698 | MS.gene040149:CDS | 40.0% | |
| TGTGTGAGATATTCTCCAGA+TGG | + | chr4.4:592111-592130 | MS.gene040149:CDS | 40.0% | |
| TTAGACGTCAGGGTAAAACT+GGG | + | chr4.4:591907-591926 | MS.gene040149:intron | 40.0% | |
| TTCTGTCAACTAGATAAGGC+GGG | + | chr4.4:594616-594635 | MS.gene040149:intron | 40.0% | |
| TTTAAGCAATCTCGCAGGTA+TGG | + | chr4.4:590296-590315 | MS.gene040149:intron | 40.0% | |
| ! | AGAAATCTCCATGAAGCACT+TGG | + | chr4.4:594043-594062 | MS.gene040149:intron | 40.0% |
| ! | ATAAGGCGGGTTTCTTTACA+TGG | + | chr4.4:594629-594648 | MS.gene040149:CDS | 40.0% |
| ! | ATCTGAGGATAATAGTGGGA+AGG | + | chr4.4:593462-593481 | MS.gene040149:CDS | 40.0% |
| ! | ATTTTCACCCAACGGTGAAT+GGG | + | chr4.4:589403-589422 | MS.gene040149:CDS | 40.0% |
| ! | CTCTCCATGCATTTTTGTGA+AGG | + | chr4.4:590454-590473 | MS.gene040149:intron | 40.0% |
| ! | GTTAAGTGGATTCAAGGGAT+TGG | + | chr4.4:593724-593743 | MS.gene040149:CDS | 40.0% |
| ! | GTTACTTCTGAGAATGGTCA+AGG | - | chr4.4:593665-593684 | None:intergenic | 40.0% |
| ! | TAAGGCGGGTTTCTTTACAT+GGG | + | chr4.4:594630-594649 | MS.gene040149:CDS | 40.0% |
| ! | TCCAAAAGTACATTGACGGA+GGG | - | chr4.4:593059-593078 | None:intergenic | 40.0% |
| ! | TCTAGGGTTACTTCTGAGAA+TGG | - | chr4.4:593671-593690 | None:intergenic | 40.0% |
| ! | TGGCAATGATGAGGATTTTC+TGG | - | chr4.4:591832-591851 | None:intergenic | 40.0% |
| ! | TGGTTGACTTCCGATATCAA+TGG | - | chr4.4:594678-594697 | None:intergenic | 40.0% |
| ! | TTGTCACTGTTTCTCTTGGT+GGG | + | chr4.4:593563-593582 | MS.gene040149:CDS | 40.0% |
| !! | AAAATTGGTGCTACAGCAGT+TGG | - | chr4.4:591492-591511 | None:intergenic | 40.0% |
| !! | AAATTGGTGCTACAGCAGTT+GGG | - | chr4.4:591491-591510 | None:intergenic | 40.0% |
| AAAGACACACACATAGGACC+TGG | + | chr4.4:591403-591422 | MS.gene040149:intron | 45.0% | |
| AAGGGGTTATCTTCCAGACA+CGG | - | chr4.4:595602-595621 | None:intergenic | 45.0% | |
| ACATGCTGTACCATACTGCA+CGG | + | chr4.4:595382-595401 | MS.gene040149:CDS | 45.0% | |
| ACCATCCTGACCACCAATAA+TGG | - | chr4.4:594852-594871 | None:intergenic | 45.0% | |
| ACCTAAGTGAGCACCCTTTA+TGG | - | chr4.4:595514-595533 | None:intergenic | 45.0% | |
| AGCAATCCTACTGCTATCAG+GGG | - | chr4.4:595427-595446 | None:intergenic | 45.0% | |
| AGTGTGCGGGACAAATTTCA+TGG | + | chr4.4:594526-594545 | MS.gene040149:intron | 45.0% | |
| AGTTTCGTGTTCTTTCTGGG+AGG | + | chr4.4:589495-589514 | MS.gene040149:CDS | 45.0% | |
| ATGTCCTGAAAACGATGTCG+GGG | - | chr4.4:593626-593645 | None:intergenic | 45.0% | |
| CAATGGATAGGTGGGATTCT+GGG | + | chr4.4:590141-590160 | MS.gene040149:intron | 45.0% | |
| CATGATAACCGATCTGGCAT+TGG | - | chr4.4:589315-589334 | None:intergenic | 45.0% | |
| CTCACTTAGGTGGGGTTTAT+GGG | + | chr4.4:595523-595542 | MS.gene040149:CDS | 45.0% | |
| GACAAGAAAATCCTCTCCAC+AGG | - | chr4.4:590249-590268 | None:intergenic | 45.0% | |
| GATAGCAGTAGGATTGCTAC+AGG | + | chr4.4:595429-595448 | MS.gene040149:CDS | 45.0% | |
| GCGACAATTCTGATACCATC+AGG | - | chr4.4:589542-589561 | None:intergenic | 45.0% | |
| GGAAAGACTGGAGAGAAGAT+CGG | + | chr4.4:592183-592202 | MS.gene040149:CDS | 45.0% | |
| GGAAGTGAAGCCATTATTGG+TGG | + | chr4.4:594839-594858 | MS.gene040149:CDS | 45.0% | |
| GGAGTTGAAGACATGCTTGT+AGG | + | chr4.4:593517-593536 | MS.gene040149:CDS | 45.0% | |
| GGAGTTTGGAGGAAAACAGT+GGG | + | chr4.4:592877-592896 | MS.gene040149:intron | 45.0% | |
| GTAAGCATGTTCGCCATAGA+CGG | - | chr4.4:589366-589385 | None:intergenic | 45.0% | |
| GTAGCAATCCTACTGCTATC+AGG | - | chr4.4:595429-595448 | None:intergenic | 45.0% | |
| TAGCACCCCTATGTTTCTCA+AGG | - | chr4.4:594925-594944 | None:intergenic | 45.0% | |
| TCTAACCCCCTCCAATTTCA+TGG | + | chr4.4:591537-591556 | MS.gene040149:intron | 45.0% | |
| TCTTTACATGGGGATCAGTG+CGG | + | chr4.4:594641-594660 | MS.gene040149:CDS | 45.0% | |
| TGGAGTTTGGAGGAAAACAG+TGG | + | chr4.4:592876-592895 | MS.gene040149:intron | 45.0% | |
| TGGTGTGAGAAACTCAATGG+CGG | + | chr4.4:590316-590335 | MS.gene040149:intron | 45.0% | |
| TGTTTGAGAGTTTGGAGGGA+GGG | - | chr4.4:593201-593220 | None:intergenic | 45.0% | |
| TTGCACCATGAAATTGGAGG+GGG | - | chr4.4:591545-591564 | None:intergenic | 45.0% | |
| TTGTTTGAGAGTTTGGAGGG+AGG | - | chr4.4:593202-593221 | None:intergenic | 45.0% | |
| TTTGGAGGAAAACAGTGGGA+GGG | + | chr4.4:592881-592900 | MS.gene040149:intron | 45.0% | |
| ! | AAGGCGGGTTTCTTTACATG+GGG | + | chr4.4:594631-594650 | MS.gene040149:CDS | 45.0% |
| ! | ACAATGCGAAAAGGCCTTGT+CGG | - | chr4.4:590224-590243 | None:intergenic | 45.0% |
| ! | ACTTCTGAGAATGGTCAAGG+AGG | - | chr4.4:593662-593681 | None:intergenic | 45.0% |
| ! | AGGATGCTTTTATCCGTGTC+TGG | + | chr4.4:595586-595605 | MS.gene040149:CDS | 45.0% |
| ! | ATTGGTGTAGGTGATGGTGT+TGG | - | chr4.4:589297-589316 | None:intergenic | 45.0% |
| ! | CTCCAAAAGTACATTGACGG+AGG | - | chr4.4:593060-593079 | None:intergenic | 45.0% |
| ! | CTTGTCACTGTTTCTCTTGG+TGG | + | chr4.4:593562-593581 | MS.gene040149:CDS | 45.0% |
| ! | GATTTTCACCCAACGGTGAA+TGG | + | chr4.4:589402-589421 | MS.gene040149:CDS | 45.0% |
| ! | GGTATCAGAATTGTCGCTTC+TGG | + | chr4.4:589545-589564 | MS.gene040149:CDS | 45.0% |
| ! | GGTGAGTTATCTTCTGAAGG+TGG | + | chr4.4:592204-592223 | MS.gene040149:CDS | 45.0% |
| ! | GTAGGTGATGGTGTTGGATT+TGG | - | chr4.4:589291-589310 | None:intergenic | 45.0% |
| ! | TGAAGCCATTATTGGTGGTC+AGG | + | chr4.4:594844-594863 | MS.gene040149:CDS | 45.0% |
| !! | ACCATAAAGGGTGCTCACTT+AGG | + | chr4.4:595510-595529 | MS.gene040149:CDS | 45.0% |
| !! | ATAAAGGGTGCTCACTTAGG+TGG | + | chr4.4:595513-595532 | MS.gene040149:CDS | 45.0% |
| !! | TAAAGGGTGCTCACTTAGGT+GGG | + | chr4.4:595514-595533 | MS.gene040149:CDS | 45.0% |
| !! | TACAAGACAGGAGCACTCTA+GGG | - | chr4.4:593687-593706 | None:intergenic | 45.0% |
| !! | TGGGATTCTGGGACTAATGT+TGG | + | chr4.4:590152-590171 | MS.gene040149:CDS | 45.0% |
| !!! | GGCTTTGTTTTGGAGTTTGG+AGG | + | chr4.4:592866-592885 | MS.gene040149:intron | 45.0% |
| !! | TACTATATATATATATATAT+AGG | + | chr4.4:589658-589677 | MS.gene040149:intron | 5.0% |
| !! | TATAAAAAAAAAAAAGTTAT+TGG | - | chr4.4:590924-590943 | None:intergenic | 5.0% |
| !!! | ATATTATTTTTAAAAAAACA+TGG | + | chr4.4:591204-591223 | MS.gene040149:intron | 5.0% |
| ACTAGTACTCACATCTCGGG+AGG | - | chr4.4:595029-595048 | None:intergenic | 50.0% | |
| AGATGCAACCCATTCACCGT+TGG | - | chr4.4:589414-589433 | None:intergenic | 50.0% | |
| AGTACATTGACGGAGGGCTT+TGG | - | chr4.4:593053-593072 | None:intergenic | 50.0% | |
| CACCTACACCAATGCCAGAT+CGG | + | chr4.4:589304-589323 | MS.gene040149:CDS | 50.0% | |
| CATAGACGGAGACATGAAGG+GGG | - | chr4.4:589352-589371 | None:intergenic | 50.0% | |
| CATGTCTTCAACTCCACCAG+AGG | - | chr4.4:593512-593531 | None:intergenic | 50.0% | |
| CCACAGGTGACAATGCGAAA+AGG | - | chr4.4:590233-590252 | None:intergenic | 50.0% | |
| CCATAGACGGAGACATGAAG+GGG | - | chr4.4:589353-589372 | None:intergenic | 50.0% | |
| CTCTTCTTCTGCAGCTGCTA+AGG | - | chr4.4:593794-593813 | None:intergenic | 50.0% | |
| CTGATGACACGGGACATGTA+TGG | - | chr4.4:591602-591621 | None:intergenic | 50.0% | |
| GAGCTTACGTGGCAATGATG+AGG | - | chr4.4:591841-591860 | None:intergenic | 50.0% | |
| GAGGAGTAAAGGGAAGGGAA+AGG | - | chr4.4:593154-593173 | None:intergenic | 50.0% | |
| GAGGGGAGGAAAGAAAAGGT+AGG | + | chr4.4:592899-592918 | MS.gene040149:intron | 50.0% | |
| GATCTTCAGTGGTCTCCTGA+TGG | + | chr4.4:589524-589543 | MS.gene040149:CDS | 50.0% | |
| GATGCAACCCATTCACCGTT+GGG | - | chr4.4:589413-589432 | None:intergenic | 50.0% | |
| GCAATGGATAGGTGGGATTC+TGG | + | chr4.4:590140-590159 | MS.gene040149:intron | 50.0% | |
| GCATCTGTTGTCTCGTCTGA+TGG | + | chr4.4:594818-594837 | MS.gene040149:CDS | 50.0% | |
| GCCATAGACGGAGACATGAA+GGG | - | chr4.4:589354-589373 | None:intergenic | 50.0% | |
| GCTCACTTAGGTGGGGTTTA+TGG | + | chr4.4:595522-595541 | MS.gene040149:CDS | 50.0% | |
| GGAGGATCGATGATCTTCAG+TGG | + | chr4.4:589513-589532 | MS.gene040149:CDS | 50.0% | |
| GGTAGCAAAGTGAGCTTACG+TGG | - | chr4.4:590731-590750 | None:intergenic | 50.0% | |
| GTCGCTTCTGGTGAAGCTAA+AGG | + | chr4.4:589557-589576 | MS.gene040149:CDS | 50.0% | |
| GTTGGGTGAAAATCGAGCGA+CGG | - | chr4.4:589396-589415 | None:intergenic | 50.0% | |
| GTTTGAGAGTTTGGAGGGAG+GGG | - | chr4.4:593200-593219 | None:intergenic | 50.0% | |
| GTTTGGAGGAAAACAGTGGG+AGG | + | chr4.4:592880-592899 | MS.gene040149:intron | 50.0% | |
| TACTAGATCGTCTACCCGTG+CGG | + | chr4.4:590841-590860 | MS.gene040149:intron | 50.0% | |
| TGCACTAGCCAAGTGCTTCA+TGG | - | chr4.4:594054-594073 | None:intergenic | 50.0% | |
| TTGGAGGAAAACAGTGGGAG+GGG | + | chr4.4:592882-592901 | MS.gene040149:intron | 50.0% | |
| ! | AAAGCCCCGACATCGTTTTC+AGG | + | chr4.4:593619-593638 | MS.gene040149:CDS | 50.0% |
| ! | CCTTTTCGCATTGTCACCTG+TGG | + | chr4.4:590230-590249 | MS.gene040149:CDS | 50.0% |
| ! | GCCATTATTGGTGGTCAGGA+TGG | + | chr4.4:594848-594867 | MS.gene040149:CDS | 50.0% |
| ! | GCCCTCCGTCAATGTACTTT+TGG | + | chr4.4:593055-593074 | MS.gene040149:intron | 50.0% |
| ! | GTCGCTCGATTTTCACCCAA+CGG | + | chr4.4:589395-589414 | MS.gene040149:CDS | 50.0% |
| ! | TAGTTTGGTTAGCTCAGGCG+AGG | + | chr4.4:595566-595585 | MS.gene040149:CDS | 50.0% |
| ! | TCTTCTGAAGGTGGCCATAC+TGG | + | chr4.4:592213-592232 | MS.gene040149:CDS | 50.0% |
| !! | AAAGGGTGCTCACTTAGGTG+GGG | + | chr4.4:595515-595534 | MS.gene040149:CDS | 50.0% |
| !! | AACCGATCTGGCATTGGTGT+AGG | - | chr4.4:589309-589328 | None:intergenic | 50.0% |
| !! | CTACAAGACAGGAGCACTCT+AGG | - | chr4.4:593688-593707 | None:intergenic | 50.0% |
| !! | GAGGGCTCTGAAGATAAAGG+AGG | - | chr4.4:593173-593192 | None:intergenic | 50.0% |
| !! | TCTGGCATTGGTGTAGGTGA+TGG | - | chr4.4:589303-589322 | None:intergenic | 50.0% |
| AAAATCGAGCGACGGTGGCA+GGG | - | chr4.4:589388-589407 | None:intergenic | 55.0% | |
| CCCCTTCATGTCTCCGTCTA+TGG | + | chr4.4:589350-589369 | MS.gene040149:CDS | 55.0% | |
| CGCCATAGACGGAGACATGA+AGG | - | chr4.4:589355-589374 | None:intergenic | 55.0% | |
| CGCCGGAGATGAGAATACCA+CGG | - | chr4.4:589265-589284 | None:intergenic | 55.0% | |
| CGGAGACATGAAGGGGGTTA+TGG | - | chr4.4:589346-589365 | None:intergenic | 55.0% | |
| CTTGGTCCCCTGATAGCAGT+AGG | + | chr4.4:595418-595437 | MS.gene040149:CDS | 55.0% | |
| GCTGTTAGCTGGAGTCCTGA+TGG | + | chr4.4:592246-592265 | MS.gene040149:CDS | 55.0% | |
| GGCCGTGGTATTCTCATCTC+CGG | + | chr4.4:589260-589279 | MS.gene040149:CDS | 55.0% | |
| GTGGGAGGGGAGGAAAGAAA+AGG | + | chr4.4:592895-592914 | MS.gene040149:intron | 55.0% | |
| GTTGCATCTGCTGACGTGTC+AGG | + | chr4.4:589425-589444 | MS.gene040149:CDS | 55.0% | |
| TACTCACATCTCGGGAGGCA+CGG | - | chr4.4:595024-595043 | None:intergenic | 55.0% | |
| TCAGGAGTTGTCATGCTGCG+TGG | + | chr4.4:594752-594771 | MS.gene040149:CDS | 55.0% | |
| TCGCATTGTCACCTGTGGAG+AGG | + | chr4.4:590235-590254 | MS.gene040149:CDS | 55.0% | |
| TGCACGCCTTCAACAGAACG+TGG | + | chr4.4:589239-589258 | MS.gene040149:CDS | 55.0% | |
| ! | ACATGCTTGTAGGGTGCCTG+TGG | + | chr4.4:593527-593546 | MS.gene040149:CDS | 55.0% |
| ! | ACGTTCTGTTGAAGGCGTGC+AGG | - | chr4.4:589240-589259 | None:intergenic | 55.0% |
| ! | GGTGTTGGATTTGGAGTCGC+CGG | - | chr4.4:589282-589301 | None:intergenic | 55.0% |
| ! | GTCAGGTACCGTGAGGATCT+GGG | + | chr4.4:589442-589461 | MS.gene040149:CDS | 55.0% |
| ! | TCAGGTACCGTGAGGATCTG+GGG | + | chr4.4:589443-589462 | MS.gene040149:CDS | 55.0% |
| ! | TGTCAGGTACCGTGAGGATC+TGG | + | chr4.4:589441-589460 | MS.gene040149:CDS | 55.0% |
| !! | GGGGAGGGCTCTGAAGATAA+AGG | - | chr4.4:593176-593195 | None:intergenic | 55.0% |
| AGAGTTTGGAGGGAGGGGAG+GGG | - | chr4.4:593195-593214 | None:intergenic | 60.0% | |
| CCACGGCCACGTTCTGTTGA+AGG | - | chr4.4:589248-589267 | None:intergenic | 60.0% | |
| CCTTCAACAGAACGTGGCCG+TGG | + | chr4.4:589245-589264 | MS.gene040149:CDS | 60.0% | |
| GAAAATCGAGCGACGGTGGC+AGG | - | chr4.4:589389-589408 | None:intergenic | 60.0% | |
| GAGAGTTTGGAGGGAGGGGA+GGG | - | chr4.4:593196-593215 | None:intergenic | 60.0% | |
| GAGGAAAACAGTGGGAGGGG+AGG | + | chr4.4:592885-592904 | MS.gene040149:intron | 60.0% | |
| GCGAGTTCCCCAGATCCTCA+CGG | - | chr4.4:589453-589472 | None:intergenic | 60.0% | |
| GGGTGAAAATCGAGCGACGG+TGG | - | chr4.4:589393-589412 | None:intergenic | 60.0% | |
| TGAGAGTTTGGAGGGAGGGG+AGG | - | chr4.4:593197-593216 | None:intergenic | 60.0% | |
| ! | CTGACGTGTCAGGTACCGTG+AGG | + | chr4.4:589435-589454 | MS.gene040149:CDS | 60.0% |
| TTTGGAGGGAGGGGAGGGGA+GGG | - | chr4.4:593191-593210 | None:intergenic | 65.0% | |
| GTTTGGAGGGAGGGGAGGGG+AGG | - | chr4.4:593192-593211 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 589206 | 595626 | 589206 | ID=MS.gene040149 |
| chr4.4 | mRNA | 589206 | 595626 | 589206 | ID=MS.gene040149.t1;Parent=MS.gene040149 |
| chr4.4 | exon | 589206 | 589603 | 589206 | ID=MS.gene040149.t1.exon1;Parent=MS.gene040149.t1 |
| chr4.4 | CDS | 589206 | 589603 | 589206 | ID=cds.MS.gene040149.t1;Parent=MS.gene040149.t1 |
| chr4.4 | exon | 590151 | 590312 | 590151 | ID=MS.gene040149.t1.exon2;Parent=MS.gene040149.t1 |
| chr4.4 | CDS | 590151 | 590312 | 590151 | ID=cds.MS.gene040149.t1;Parent=MS.gene040149.t1 |
| chr4.4 | exon | 592089 | 592275 | 592089 | ID=MS.gene040149.t1.exon3;Parent=MS.gene040149.t1 |
| chr4.4 | CDS | 592089 | 592275 | 592089 | ID=cds.MS.gene040149.t1;Parent=MS.gene040149.t1 |
| chr4.4 | exon | 593418 | 593840 | 593418 | ID=MS.gene040149.t1.exon4;Parent=MS.gene040149.t1 |
| chr4.4 | CDS | 593418 | 593840 | 593418 | ID=cds.MS.gene040149.t1;Parent=MS.gene040149.t1 |
| chr4.4 | exon | 594629 | 595036 | 594629 | ID=MS.gene040149.t1.exon5;Parent=MS.gene040149.t1 |
| chr4.4 | CDS | 594629 | 595036 | 594629 | ID=cds.MS.gene040149.t1;Parent=MS.gene040149.t1 |
| chr4.4 | exon | 595369 | 595626 | 595369 | ID=MS.gene040149.t1.exon6;Parent=MS.gene040149.t1 |
| chr4.4 | CDS | 595369 | 595626 | 595369 | ID=cds.MS.gene040149.t1;Parent=MS.gene040149.t1 |
| Gene Sequence |
| Protein sequence |
