Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95892.t1 | XP_003631073.1 | 98 | 611 | 12 | 0 | 1 | 611 | 1 | 611 | 0.00E+00 | 1122.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95892.t1 | Q9LV35 | 74.8 | 608 | 152 | 1 | 4 | 610 | 1 | 608 | 7.0e-251 | 867.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95892.t1 | Q1SN19 | 98.0 | 611 | 12 | 0 | 1 | 611 | 1 | 611 | 0.0e+00 | 1122.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene95892 | MS.gene47297 | PPI |
| MS.gene75846 | MS.gene95892 | PPI |
| MS.gene95892 | MS.gene55829 | PPI |
| MS.gene061659 | MS.gene95892 | PPI |
| MS.gene042491 | MS.gene95892 | PPI |
| MS.gene033840 | MS.gene95892 | PPI |
| MS.gene95892 | MS.gene048963 | PPI |
| MS.gene007355 | MS.gene95892 | PPI |
| MS.gene95892 | MS.gene80320 | PPI |
| MS.gene040852 | MS.gene95892 | PPI |
| MS.gene49831 | MS.gene95892 | PPI |
| MS.gene95892 | MS.gene020596 | PPI |
| MS.gene06110 | MS.gene95892 | PPI |
| MS.gene95892 | MS.gene026418 | PPI |
| MS.gene007592 | MS.gene95892 | PPI |
| MS.gene20209 | MS.gene95892 | PPI |
| MS.gene061041 | MS.gene95892 | PPI |
| MS.gene95892 | MS.gene41795 | PPI |
| MS.gene95892 | MS.gene22354 | PPI |
| MS.gene95892 | MS.gene08137 | PPI |
| MS.gene95892 | MS.gene069541 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95892.t1 | MTR_8g106820 | 98.036 | 611 | 12 | 0 | 1 | 611 | 1 | 611 | 0.0 | 1224 |
| MS.gene95892.t1 | MTR_1g107560 | 72.968 | 603 | 163 | 0 | 6 | 608 | 4 | 606 | 0.0 | 926 |
| MS.gene95892.t1 | MTR_1g054300 | 22.535 | 426 | 262 | 16 | 145 | 563 | 117 | 481 | 1.92e-14 | 76.6 |
| MS.gene95892.t1 | MTR_3g449990 | 24.302 | 358 | 216 | 13 | 179 | 531 | 259 | 566 | 7.48e-12 | 68.6 |
| MS.gene95892.t1 | MTR_1g072140 | 22.989 | 348 | 211 | 13 | 179 | 520 | 16 | 312 | 4.88e-11 | 64.7 |
| MS.gene95892.t1 | MTR_5g016370 | 23.237 | 241 | 162 | 8 | 53 | 284 | 341 | 567 | 7.16e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95892.t1 | AT3G18060 | 74.671 | 608 | 153 | 1 | 4 | 610 | 1 | 608 | 0.0 | 952 |
| MS.gene95892.t1 | AT2G01330 | 67.980 | 609 | 191 | 4 | 5 | 610 | 3 | 610 | 0.0 | 864 |
| MS.gene95892.t1 | AT5G52820 | 22.529 | 435 | 277 | 14 | 148 | 564 | 80 | 472 | 1.53e-12 | 70.5 |
| MS.gene95892.t1 | AT2G43770 | 25.839 | 298 | 200 | 10 | 58 | 348 | 52 | 335 | 5.71e-12 | 67.8 |
| MS.gene95892.t1 | AT4G02730 | 24.138 | 348 | 203 | 12 | 51 | 392 | 35 | 327 | 1.35e-11 | 66.6 |
| MS.gene95892.t1 | AT5G67320 | 23.967 | 242 | 161 | 8 | 52 | 284 | 358 | 585 | 1.85e-11 | 67.4 |
| MS.gene95892.t1 | AT2G41500 | 23.653 | 334 | 222 | 14 | 47 | 372 | 244 | 552 | 8.88e-11 | 65.1 |
| MS.gene95892.t1 | AT2G41500 | 23.653 | 334 | 222 | 14 | 47 | 372 | 244 | 552 | 8.88e-11 | 65.1 |
Find 165 sgRNAs with CRISPR-Local
Find 417 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCACTTAGGTGGGGTTTA+TGG | 0.082114 | 4.3:+598073 | MS.gene95892:CDS |
| AAGGAGTTTCGTGTTCTTTC+TGG | 0.134342 | 4.3:+592080 | MS.gene95892:CDS |
| CTGCACATATATTCTATTTC+TGG | 0.164431 | 4.3:+597487 | MS.gene95892:CDS |
| ACCTAAGTGAGCACCCTTTA+TGG | 0.179066 | 4.3:-598062 | None:intergenic |
| CTCACTTAGGTGGGGTTTAT+GGG | 0.206529 | 4.3:+598074 | MS.gene95892:CDS |
| AACCGTTAGTTCTGACAAAA+AGG | 0.227495 | 4.3:+594758 | MS.gene95892:CDS |
| GCTCTAGTTTCAATTGATTC+AGG | 0.239679 | 4.3:+597346 | MS.gene95892:CDS |
| GCAATGGATAGGTGGGATTC+TGG | 0.264908 | 4.3:+592745 | MS.gene95892:intron |
| GTAGCAATCCTACTGCTATC+AGG | 0.285417 | 4.3:-597977 | None:intergenic |
| CTGACAAGTCTGCAAAAGTA+TGG | 0.313171 | 4.3:+596048 | MS.gene95892:CDS |
| CCCCTTCATGTCTCCGTCTA+TGG | 0.323756 | 4.3:+591939 | MS.gene95892:CDS |
| ACCATCCTGACCACCAATAA+TGG | 0.326504 | 4.3:-597461 | None:intergenic |
| TGTCAGGTACCGTGAGGATC+TGG | 0.337070 | 4.3:+592030 | MS.gene95892:CDS |
| GTTGTGTCAATCATTAATCT+TGG | 0.338589 | 4.3:+597394 | MS.gene95892:CDS |
| GTAGGTGATGGTGTTGGATT+TGG | 0.348835 | 4.3:-591877 | None:intergenic |
| ATTCACTGATGAATATAGTT+TGG | 0.351324 | 4.3:+598102 | MS.gene95892:CDS |
| GATGCTGAAGCCGTTGATAT+CGG | 0.358907 | 4.3:+597277 | MS.gene95892:CDS |
| GAAAATCGAGCGACGGTGGC+AGG | 0.372098 | 4.3:-591975 | None:intergenic |
| CAGCATAAATACTGCCAGTA+TGG | 0.381490 | 4.3:-594839 | None:intergenic |
| GGCTAATAGAAATACCATAA+AGG | 0.390095 | 4.3:+598048 | MS.gene95892:CDS |
| TATCTTGTCACTGTTTCTCT+TGG | 0.401428 | 4.3:+596173 | MS.gene95892:CDS |
| GTTACTTCTGAGAATGGTTA+AGG | 0.405078 | 4.3:-596276 | None:intergenic |
| CTTGTCACTGTTTCTCTTGG+TGG | 0.406048 | 4.3:+596176 | MS.gene95892:CDS |
| GAAGAAGAGATTGTTATGTC+TGG | 0.410474 | 4.3:+596419 | MS.gene95892:CDS |
| GCTAATAGAAATACCATAAA+GGG | 0.416716 | 4.3:+598049 | MS.gene95892:CDS |
| TCTTCTGAAGGTGGCCATAC+TGG | 0.418434 | 4.3:+594825 | MS.gene95892:CDS |
| TAATCGAGAAGCTGTTGTTT+GGG | 0.419514 | 4.3:+597609 | MS.gene95892:CDS |
| TTAATCGAGAAGCTGTTGTT+TGG | 0.423105 | 4.3:+597608 | MS.gene95892:CDS |
| ACATTGATTTGTTCTGCCTC+TGG | 0.424474 | 4.3:+596107 | MS.gene95892:CDS |
| ACAATGCGAAAAGGCCTTGT+AGG | 0.425304 | 4.3:-592826 | None:intergenic |
| CTCCTGTCTTGTAGTTATGA+TGG | 0.428145 | 4.3:+596308 | MS.gene95892:CDS |
| GACAATTTATCCGTGCAGTA+TGG | 0.435214 | 4.3:-597943 | None:intergenic |
| CAATGGATAGGTGGGATTCT+GGG | 0.435336 | 4.3:+592746 | MS.gene95892:intron |
| CTCTTCTTCTGCAGCTGCTA+AGG | 0.435458 | 4.3:-596405 | None:intergenic |
| CTACAAGACAGGAGCACTCT+AGG | 0.437677 | 4.3:-596299 | None:intergenic |
| GATGAGCTCGGTGGAGTTGA+CGG | 0.438057 | 4.3:+591794 | None:intergenic |
| GAAAGACTGGAGAGAAGATC+GGG | 0.439749 | 4.3:+594796 | MS.gene95892:CDS |
| CGAGATTGCTTAAATCTAAA+GGG | 0.439758 | 4.3:-592892 | None:intergenic |
| GGTATCAGAATTGTCGCTTC+TGG | 0.440339 | 4.3:+592134 | MS.gene95892:CDS |
| CACGGATAAATTGTCTTGCT+TGG | 0.442191 | 4.3:+597951 | MS.gene95892:CDS |
| TGAAGCCATTATTGGTGGTC+AGG | 0.444420 | 4.3:+597456 | MS.gene95892:CDS |
| AGTGCAACACTAAAATCCTT+TGG | 0.445789 | 4.3:-597307 | None:intergenic |
| GTTACAAATTTACTGCCATC+TGG | 0.447597 | 4.3:-594738 | None:intergenic |
| GATGGAAGTGAAGCCATTAT+TGG | 0.448281 | 4.3:+597448 | MS.gene95892:CDS |
| TTAATAGTTAAGTGGATTCA+AGG | 0.455728 | 4.3:+596332 | MS.gene95892:CDS |
| TTGTCACTGTTTCTCTTGGT+GGG | 0.456402 | 4.3:+596177 | MS.gene95892:CDS |
| GCGAGATTGCTTAAATCTAA+AGG | 0.459551 | 4.3:-592893 | None:intergenic |
| ATTGAAACTAGAGCAAGTTC+AGG | 0.463321 | 4.3:-597337 | None:intergenic |
| TTAAGGCGGGTTTCTTTACA+TGG | 0.468205 | 4.3:+597241 | MS.gene95892:CDS |
| GTTAAGTGGATTCAAGGGAT+TGG | 0.468346 | 4.3:+596338 | MS.gene95892:CDS |
| GTCAGGTACCGTGAGGATCT+GGG | 0.468616 | 4.3:+592031 | MS.gene95892:CDS |
| GAATATAGTTTGGTTAGCTC+AGG | 0.471315 | 4.3:+598112 | MS.gene95892:CDS |
| ACTAATGTTGGTGAATTTGA+TGG | 0.472283 | 4.3:+592769 | MS.gene95892:CDS |
| CGCCATAGACGGAGACATGA+AGG | 0.472952 | 4.3:-591941 | None:intergenic |
| TAATCTTGGATTTACTGTTA+CGG | 0.474705 | 4.3:+597408 | MS.gene95892:CDS |
| CCACGGCCACGTTCTGTTGA+AGG | 0.475561 | 4.3:-591834 | None:intergenic |
| GCATCTGTTGTCTCGTCTGA+TGG | 0.480001 | 4.3:+597430 | MS.gene95892:CDS |
| AGGCTGTCCTTGAGAAACAT+AGG | 0.481006 | 4.3:+597527 | MS.gene95892:CDS |
| GCAGTATTTATGCTGTTAGC+TGG | 0.481308 | 4.3:+594847 | MS.gene95892:CDS |
| ATCATATTCGATGGAAAGAC+TGG | 0.482024 | 4.3:+594783 | MS.gene95892:CDS |
| TTGATTTGTTCTGCCTCTGG+TGG | 0.491775 | 4.3:+596110 | MS.gene95892:CDS |
| GGAGTTGAAGACATGCTTGT+AGG | 0.493315 | 4.3:+596131 | MS.gene95892:CDS |
| ATTCATCATGATAACCGATC+TGG | 0.494504 | 4.3:-591907 | None:intergenic |
| GTTGCATCTGCTGACGTGTC+AGG | 0.496526 | 4.3:+592014 | MS.gene95892:CDS |
| TATGTCCTGAAAACGATGCC+AGG | 0.503518 | 4.3:-596238 | None:intergenic |
| GCCATTATTGGTGGTCAGGA+TGG | 0.505715 | 4.3:+597460 | MS.gene95892:CDS |
| TCTAGGGTTACTTCTGAGAA+TGG | 0.505822 | 4.3:-596282 | None:intergenic |
| ATGATGGCTTAATAGTTAAG+TGG | 0.506182 | 4.3:+596324 | MS.gene95892:CDS |
| GATGCAACCCATTCACCGTT+GGG | 0.506443 | 4.3:-591999 | None:intergenic |
| ACGTTCTGTTGAAGGCGTGC+AGG | 0.508737 | 4.3:-591826 | None:intergenic |
| CTTGGTCCCCTGATAGCAGT+AGG | 0.509910 | 4.3:+597969 | MS.gene95892:CDS |
| TAGCAATCCTACTGCTATCA+GGG | 0.510406 | 4.3:-597976 | None:intergenic |
| ATGGTATTTCTATTAGCCAC+AGG | 0.512733 | 4.3:-598043 | None:intergenic |
| CATGATAACCGATCTGGCAT+TGG | 0.515012 | 4.3:-591901 | None:intergenic |
| CCACAGGTGACAATGCGAAA+AGG | 0.517474 | 4.3:-592835 | None:intergenic |
| GGCCGTGGTATTCTCATCTC+CGG | 0.518010 | 4.3:+591849 | MS.gene95892:CDS |
| GGCTGTCCTTGAGAAACATA+GGG | 0.519095 | 4.3:+597528 | MS.gene95892:CDS |
| GTCGCTTCTGGTGAAGCTAA+AGG | 0.520427 | 4.3:+592146 | MS.gene95892:CDS |
| GGAAAGACTGGAGAGAAGAT+CGG | 0.524099 | 4.3:+594795 | MS.gene95892:CDS |
| TTCTGACAACCAGTTAAGGC+GGG | 0.529350 | 4.3:+597228 | MS.gene95892:intron |
| TAAAGGGTGCTCACTTAGGT+GGG | 0.536033 | 4.3:+598065 | MS.gene95892:CDS |
| AGATGCAACCCATTCACCGT+TGG | 0.537671 | 4.3:-592000 | None:intergenic |
| TCTATCTTTCAAGATGAGCT+CGG | 0.538842 | 4.3:+591782 | None:intergenic |
| GAGTTGAAGACATGCTTGTA+GGG | 0.539058 | 4.3:+596132 | MS.gene95892:CDS |
| GCGACAATTCTGATACCATC+AGG | 0.539289 | 4.3:-592128 | None:intergenic |
| ACATATCTGAGGATAACATT+GGG | 0.539910 | 4.3:+596072 | MS.gene95892:CDS |
| GACATATCTGAGGATAACAT+TGG | 0.541920 | 4.3:+596071 | MS.gene95892:CDS |
| GATAGCAGTAGGATTGCTAC+AGG | 0.543234 | 4.3:+597980 | MS.gene95892:CDS |
| TACAAGACAGGAGCACTCTA+GGG | 0.546231 | 4.3:-596298 | None:intergenic |
| TACTCACATCTCGGGAGGCA+CGG | 0.546800 | 4.3:-597633 | None:intergenic |
| GCTGTTAGCTGGAGTCCTGA+TGG | 0.548585 | 4.3:+594858 | MS.gene95892:CDS |
| AGTACTAGTACTCACATCTC+GGG | 0.551436 | 4.3:-597641 | None:intergenic |
| TAGCGGTAAATTACAAAGGA+AGG | 0.551726 | 4.3:+596364 | MS.gene95892:CDS |
| AGCCATCATAACTACAAGAC+AGG | 0.557501 | 4.3:-596310 | None:intergenic |
| GTAAGCATGTTCGCCATAGA+CGG | 0.558880 | 4.3:-591952 | None:intergenic |
| CACCTACACCAATGCCAGAT+CGG | 0.562580 | 4.3:+591893 | MS.gene95892:CDS |
| ACCATAAAGGGTGCTCACTT+AGG | 0.564151 | 4.3:+598061 | MS.gene95892:CDS |
| TGGTGATACACTTGTTGAAG+AGG | 0.566707 | 4.3:+597507 | MS.gene95892:CDS |
| ATTGGTGTAGGTGATGGTGT+TGG | 0.567354 | 4.3:-591883 | None:intergenic |
| ATAAAGGGTGCTCACTTAGG+TGG | 0.568101 | 4.3:+598064 | MS.gene95892:CDS |
| GGTGTTGGATTTGGAGTCGC+CGG | 0.568267 | 4.3:-591868 | None:intergenic |
| TGGGATTCTGGGACTAATGT+TGG | 0.568712 | 4.3:+592757 | MS.gene95892:CDS |
| TCGCATTGTCACCTGTGGAG+AGG | 0.571600 | 4.3:+592840 | MS.gene95892:CDS |
| TAATAGTTAAGTGGATTCAA+GGG | 0.572072 | 4.3:+596333 | MS.gene95892:CDS |
| ATCGGGGAGTTGTCTTCTGA+AGG | 0.572411 | 4.3:+594813 | MS.gene95892:CDS |
| CCTTCAACAGAACGTGGCCG+TGG | 0.572710 | 4.3:+591834 | MS.gene95892:CDS |
| CAAGATAATCGTTCAACCAC+AGG | 0.574023 | 4.3:-596157 | None:intergenic |
| GACAAGAAAATCCTCTCCAC+AGG | 0.576600 | 4.3:-592851 | None:intergenic |
| AACTCAAAACTCGTCTTGAG+TGG | 0.584201 | 4.3:-592792 | None:intergenic |
| GATCTTCAGTGGTCTCCTGA+TGG | 0.585210 | 4.3:+592113 | MS.gene95892:CDS |
| TACAACTTGATCTTCACGGA+GGG | 0.586215 | 4.3:-598168 | None:intergenic |
| TGGTTGACTTCCGATATCAA+CGG | 0.596580 | 4.3:-597287 | None:intergenic |
| ACATGCTTGTAGGGTGCCTG+TGG | 0.597201 | 4.3:+596141 | MS.gene95892:CDS |
| TGACAAGTCTGCAAAAGTAT+GGG | 0.598045 | 4.3:+596049 | MS.gene95892:CDS |
| AGTTTCGTGTTCTTTCTGGA+AGG | 0.598240 | 4.3:+592084 | MS.gene95892:CDS |
| GCCATAGACGGAGACATGAA+GGG | 0.598923 | 4.3:-591940 | None:intergenic |
| AAAATCGAGCGACGGTGGCA+GGG | 0.599251 | 4.3:-591974 | None:intergenic |
| CTTCTGACAACCAGTTAAGG+CGG | 0.599398 | 4.3:+597227 | MS.gene95892:intron |
| AAGTGATCTTGATAAAGCCC+TGG | 0.602761 | 4.3:+596220 | MS.gene95892:CDS |
| TAAGGCGGGTTTCTTTACAT+GGG | 0.605205 | 4.3:+597242 | MS.gene95892:CDS |
| TATTTCTATTAGCCACAGGT+TGG | 0.608800 | 4.3:-598039 | None:intergenic |
| AAGGCGGGTTTCTTTACATG+GGG | 0.609622 | 4.3:+597243 | MS.gene95892:CDS |
| AAAGGGTGCTCACTTAGGTG+GGG | 0.609702 | 4.3:+598066 | MS.gene95892:CDS |
| GGGGAGTTGTCTTCTGAAGG+TGG | 0.609767 | 4.3:+594816 | MS.gene95892:CDS |
| ACAACTTGATCTTCACGGAG+GGG | 0.609851 | 4.3:-598167 | None:intergenic |
| TAGCACCCCTATGTTTCTCA+AGG | 0.610582 | 4.3:-597534 | None:intergenic |
| ATGTCCTGAAAACGATGCCA+GGG | 0.617314 | 4.3:-596237 | None:intergenic |
| TCTGGCATTGGTGTAGGTGA+TGG | 0.618379 | 4.3:-591889 | None:intergenic |
| GATATAGCGGTAAATTACAA+AGG | 0.618475 | 4.3:+596360 | MS.gene95892:CDS |
| GGGGTGCTATTAGTGTCATA+CGG | 0.622185 | 4.3:+597548 | MS.gene95892:CDS |
| TGTGTGAGATATTCTCCAGA+TGG | 0.622541 | 4.3:+594723 | MS.gene95892:CDS |
| ATCTGAGGATAACATTGGGA+AGG | 0.622877 | 4.3:+596076 | MS.gene95892:CDS |
| TAGTTTGGTTAGCTCAGGCG+AGG | 0.625931 | 4.3:+598117 | MS.gene95892:CDS |
| GGGTGAAAATCGAGCGACGG+TGG | 0.626749 | 4.3:-591979 | None:intergenic |
| TCAGGTACCGTGAGGATCTG+GGG | 0.627630 | 4.3:+592032 | MS.gene95892:CDS |
| TTAGATTTAAGCAATCTCGC+AGG | 0.628883 | 4.3:+592896 | MS.gene95892:CDS |
| ACTTCTGAGAATGGTTAAGG+AGG | 0.628997 | 4.3:-596273 | None:intergenic |
| GTTGTGCTTATAAACCTACA+AGG | 0.629807 | 4.3:+592812 | MS.gene95892:CDS |
| CCATAGACGGAGACATGAAG+GGG | 0.633505 | 4.3:-591939 | None:intergenic |
| GAAGGATCGATGATCTTCAG+TGG | 0.639646 | 4.3:+592102 | MS.gene95892:CDS |
| ATACATAAAAGCGCGAACAA+AGG | 0.644313 | 4.3:-592174 | None:intergenic |
| CATGTCTTCAACTCCACCAG+AGG | 0.652652 | 4.3:-596123 | None:intergenic |
| ATCTTTCAAGATGAGCTCGG+TGG | 0.653857 | 4.3:+591785 | None:intergenic |
| GCGAGTTCCCCAGATCCTCA+CGG | 0.657058 | 4.3:-592039 | None:intergenic |
| AAAAGTATGGGACATATCTG+AGG | 0.658576 | 4.3:+596061 | MS.gene95892:CDS |
| GGAAGTGAAGCCATTATTGG+TGG | 0.661612 | 4.3:+597451 | MS.gene95892:CDS |
| ACATGCTGTACCATACTGCA+CGG | 0.663929 | 4.3:+597933 | MS.gene95892:CDS |
| AACCGATCTGGCATTGGTGT+AGG | 0.664335 | 4.3:-591895 | None:intergenic |
| TGATATCGGAAGTCAACCAA+AGG | 0.668544 | 4.3:+597291 | MS.gene95892:CDS |
| TGCACGCCTTCAACAGAACG+TGG | 0.678162 | 4.3:+591828 | MS.gene95892:CDS |
| TCTTTACATGGGGATCAGTG+CGG | 0.680969 | 4.3:+597253 | MS.gene95892:CDS |
| ATATGAGATTGACCAACCTG+TGG | 0.696248 | 4.3:+598027 | MS.gene95892:CDS |
| TCAGGAGTTGTCATGCTGCG+TGG | 0.701235 | 4.3:+597364 | MS.gene95892:CDS |
| ATTCAAGGGATTGGATATAG+CGG | 0.701405 | 4.3:+596347 | MS.gene95892:CDS |
| GTTGGGTGAAAATCGAGCGA+CGG | 0.702331 | 4.3:-591982 | None:intergenic |
| GATTGCTTAAATCTAAAGGG+AGG | 0.704673 | 4.3:-592889 | None:intergenic |
| ACTAGTACTCACATCTCGGG+AGG | 0.705295 | 4.3:-597638 | None:intergenic |
| GAGGGGTTATCTTCCAGACA+CGG | 0.708079 | 4.3:-598150 | None:intergenic |
| CTGACGTGTCAGGTACCGTG+AGG | 0.722749 | 4.3:+592024 | MS.gene95892:CDS |
| AAAGACTGGAGAGAAGATCG+GGG | 0.725207 | 4.3:+594797 | MS.gene95892:CDS |
| AGCAATCCTACTGCTATCAG+GGG | 0.726822 | 4.3:-597975 | None:intergenic |
| GCTGTCCTTGAGAAACATAG+GGG | 0.728721 | 4.3:+597529 | MS.gene95892:CDS |
| CGCCGGAGATGAGAATACCA+CGG | 0.738636 | 4.3:-591851 | None:intergenic |
| TTACAACTTGATCTTCACGG+AGG | 0.742051 | 4.3:-598169 | None:intergenic |
| CATAGACGGAGACATGAAGG+GGG | 0.769626 | 4.3:-591938 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTAGTATACTTTTTAT+GGG | + | chr4.3:596576-596595 | MS.gene95892:intron | 10.0% |
| !!! | TTGATTTTAAAATTTCAAAT+AGG | - | chr4.3:595382-595401 | None:intergenic | 10.0% |
| !!! | TTTAATTAGTATACTTTTTA+TGG | + | chr4.3:596575-596594 | MS.gene95892:intron | 10.0% |
| !! | ATAATACTTTCGTTATTTAA+AGG | - | chr4.3:597816-597835 | None:intergenic | 15.0% |
| !! | ATCAAGAAAAAAATTAGAAT+TGG | + | chr4.3:593652-593671 | MS.gene95892:intron | 15.0% |
| !! | TCACTTTACTATATTTATAT+AGG | + | chr4.3:592241-592260 | MS.gene95892:intron | 15.0% |
| !! | TGTTATCTATTTAAGTATAT+TGG | + | chr4.3:596621-596640 | MS.gene95892:intron | 15.0% |
| !! | TTACTATATTTATATAGGAT+AGG | + | chr4.3:592246-592265 | MS.gene95892:intron | 15.0% |
| !!! | AAATTAATCAGTTAGTTTTA+TGG | - | chr4.3:593872-593891 | None:intergenic | 15.0% |
| !!! | ATGTTATAACTTGTTTTTAT+AGG | + | chr4.3:592535-592554 | MS.gene95892:intron | 15.0% |
| !!! | GATAAAACATAAAAAGTATA+TGG | - | chr4.3:593181-593200 | None:intergenic | 15.0% |
| !!! | GTATTAATTAATTTTAAGTG+AGG | - | chr4.3:594416-594435 | None:intergenic | 15.0% |
| !!! | GTCAAATGAAATTAATTTTT+GGG | - | chr4.3:596936-596955 | None:intergenic | 15.0% |
| !!! | TAATTAGACACATATTTTTA+AGG | - | chr4.3:593128-593147 | None:intergenic | 15.0% |
| !!! | TGAGTATTTTTTATTGATTA+TGG | + | chr4.3:594901-594920 | MS.gene95892:intron | 15.0% |
| !!! | TGGTTTTATAAATTATAGAT+AGG | - | chr4.3:593513-593532 | None:intergenic | 15.0% |
| !!! | TTGAAGATATTTTTAAAATG+TGG | - | chr4.3:594485-594504 | None:intergenic | 15.0% |
| !!! | TTTTGCAATTAAAATGAAAA+GGG | + | chr4.3:597767-597786 | MS.gene95892:intron | 15.0% |
| !!! | TTTTTTTTTTTGTAACAAAC+AGG | + | chr4.3:597719-597738 | MS.gene95892:intron | 15.0% |
| !! | AATAAGTGTTTATACATGAT+AGG | - | chr4.3:592413-592432 | None:intergenic | 20.0% |
| !! | AATTAAATCAACTAAGTTGT+TGG | - | chr4.3:593557-593576 | None:intergenic | 20.0% |
| !! | AATTACTACTGCTTATTTAA+TGG | - | chr4.3:596694-596713 | None:intergenic | 20.0% |
| !! | ACAAAATATATCGAACATTT+AGG | - | chr4.3:595841-595860 | None:intergenic | 20.0% |
| !! | ACTATAAACTAAGAAATATG+TGG | + | chr4.3:595037-595056 | MS.gene95892:intron | 20.0% |
| !! | AGAATAATAAATCTCATTCA+AGG | + | chr4.3:595726-595745 | MS.gene95892:intron | 20.0% |
| !! | ATATTATAAGTTAGCAATTG+AGG | + | chr4.3:597040-597059 | MS.gene95892:intron | 20.0% |
| !! | ATTACTACTGCTTATTTAAT+GGG | - | chr4.3:596693-596712 | None:intergenic | 20.0% |
| !! | ATTGCTAACTTATAATATCT+TGG | - | chr4.3:597038-597057 | None:intergenic | 20.0% |
| !! | CTTTAAACATAAAGAGAAAA+GGG | - | chr4.3:594565-594584 | None:intergenic | 20.0% |
| !! | GTGCAAATCTATATAAAATA+TGG | + | chr4.3:593594-593613 | MS.gene95892:intron | 20.0% |
| !! | TAAATGAGAATATTGATCTT+TGG | - | chr4.3:593678-593697 | None:intergenic | 20.0% |
| !! | TCTTTAAACATAAAGAGAAA+AGG | - | chr4.3:594566-594585 | None:intergenic | 20.0% |
| !! | TGAGATTTATTATTCTACAT+TGG | - | chr4.3:595722-595741 | None:intergenic | 20.0% |
| !! | TTGATATATTACAAAATCTG+TGG | - | chr4.3:593637-593656 | None:intergenic | 20.0% |
| !! | TTGCTAACTTATAATATCTT+GGG | - | chr4.3:597037-597056 | None:intergenic | 20.0% |
| !! | TTTAAACATAAAGAGAAAAG+GGG | - | chr4.3:594564-594583 | None:intergenic | 20.0% |
| !! | TTTCATTTGACCAATTAATA+CGG | + | chr4.3:596945-596964 | MS.gene95892:intron | 20.0% |
| !! | TTTGAAAGAAAAGAAAAGAA+AGG | - | chr4.3:592210-592229 | None:intergenic | 20.0% |
| !! | TTTGTTTATCCAAATCAAAT+TGG | - | chr4.3:596533-596552 | None:intergenic | 20.0% |
| !!! | AAGACATTTTTCTTTATAGA+AGG | - | chr4.3:593203-593222 | None:intergenic | 20.0% |
| !!! | ACGATAATTTGTTTATGTAT+AGG | + | chr4.3:594679-594698 | MS.gene95892:intron | 20.0% |
| !!! | ATGTTTGAGTGAATATTTTT+TGG | + | chr4.3:592656-592675 | MS.gene95892:intron | 20.0% |
| !!! | CGATAATTTGTTTATGTATA+GGG | + | chr4.3:594680-594699 | MS.gene95892:intron | 20.0% |
| !!! | GATGAAATAAATCATTTTCT+CGG | + | chr4.3:596598-596617 | MS.gene95892:intron | 20.0% |
| !!! | GGTCAAATGAAATTAATTTT+TGG | - | chr4.3:596937-596956 | None:intergenic | 20.0% |
| !!! | GTTTTGCAATTAAAATGAAA+AGG | + | chr4.3:597766-597785 | MS.gene95892:intron | 20.0% |
| !!! | TATTTTTTATTGATTATGGC+AGG | + | chr4.3:594905-594924 | MS.gene95892:intron | 20.0% |
| !!! | TTCATTTTAATTGCAAAACT+GGG | - | chr4.3:597765-597784 | None:intergenic | 20.0% |
| !!! | TTCTCATTTATTTTATAGCA+AGG | + | chr4.3:593688-593707 | MS.gene95892:intron | 20.0% |
| !!! | TTGATGAATTTTCAAAACAT+TGG | + | chr4.3:593225-593244 | MS.gene95892:intron | 20.0% |
| !!! | TTTCATTTTAATTGCAAAAC+TGG | - | chr4.3:597766-597785 | None:intergenic | 20.0% |
| !!! | TTTTATATATGTTATTGTGC+AGG | + | chr4.3:597898-597917 | MS.gene95892:intron | 20.0% |
| ! | AAAAAATTGTCTAGACTTGA+AGG | - | chr4.3:595341-595360 | None:intergenic | 25.0% |
| ! | AAAATGTTCTTGAACAAAAC+CGG | - | chr4.3:597676-597695 | None:intergenic | 25.0% |
| ! | AAGCATCAAAATCAGATATA+GGG | - | chr4.3:592627-592646 | None:intergenic | 25.0% |
| ! | ACTAAAACTCTCCAATATAT+GGG | - | chr4.3:595699-595718 | None:intergenic | 25.0% |
| ! | ACTTGAATCATACATAAAGT+TGG | - | chr4.3:593714-593733 | None:intergenic | 25.0% |
| ! | ATAATAAATCTCATTCAAGG+TGG | + | chr4.3:595729-595748 | MS.gene95892:intron | 25.0% |
| ! | ATAGAAGTTATTCAAGCTAA+GGG | + | chr4.3:595147-595166 | MS.gene95892:intron | 25.0% |
| ! | ATTCACTGATGAATATAGTT+TGG | + | chr4.3:598102-598121 | MS.gene95892:CDS | 25.0% |
| ! | CAACATCATATAGATTGAAA+AGG | - | chr4.3:594979-594998 | None:intergenic | 25.0% |
| ! | CACACTTCAAAAATCAAAAT+TGG | - | chr4.3:594111-594130 | None:intergenic | 25.0% |
| ! | CGAAAATCGTTTATAACTAA+TGG | + | chr4.3:597173-597192 | MS.gene95892:intron | 25.0% |
| ! | CTTTCATTTACAACTAATCA+TGG | + | chr4.3:592317-592336 | MS.gene95892:intron | 25.0% |
| ! | GAAATATGTGGTAAAGTAAA+AGG | + | chr4.3:595049-595068 | MS.gene95892:intron | 25.0% |
| ! | GCTAATAGAAATACCATAAA+GGG | + | chr4.3:598049-598068 | MS.gene95892:CDS | 25.0% |
| ! | GGAAATACAAAAATACTAAC+CGG | + | chr4.3:594300-594319 | MS.gene95892:intron | 25.0% |
| ! | TAATAAATCTCATTCAAGGT+GGG | + | chr4.3:595730-595749 | MS.gene95892:intron | 25.0% |
| ! | TAATCTTGGATTTACTGTTA+CGG | + | chr4.3:597408-597427 | MS.gene95892:CDS | 25.0% |
| ! | TAATGAGAATTCAGTATTTG+CGG | - | chr4.3:593369-593388 | None:intergenic | 25.0% |
| ! | TAGAAAAGTGAATATAAGTC+AGG | - | chr4.3:595253-595272 | None:intergenic | 25.0% |
| ! | TGATTTGAATGAATGATTCA+TGG | - | chr4.3:593938-593957 | None:intergenic | 25.0% |
| !! | AAAGCATCAAAATCAGATAT+AGG | - | chr4.3:592628-592647 | None:intergenic | 25.0% |
| !! | ATGGCAATATGCAAAATTTT+GGG | - | chr4.3:593162-593181 | None:intergenic | 25.0% |
| !! | ATTTAATTTCGATACTCTGT+TGG | - | chr4.3:596805-596824 | None:intergenic | 25.0% |
| !! | CATCTAGATAAACTATTTTC+AGG | - | chr4.3:592518-592537 | None:intergenic | 25.0% |
| !! | TAATAGTTAAGTGGATTCAA+GGG | + | chr4.3:596333-596352 | MS.gene95892:CDS | 25.0% |
| !! | TATGGCAATATGCAAAATTT+TGG | - | chr4.3:593163-593182 | None:intergenic | 25.0% |
| !! | TTAATAGTTAAGTGGATTCA+AGG | + | chr4.3:596332-596351 | MS.gene95892:CDS | 25.0% |
| !! | TTTCTTGTCAACTTTTATGA+AGG | + | chr4.3:592865-592884 | MS.gene95892:CDS | 25.0% |
| !! | TTTTTACTTTACTGATGACA+CGG | - | chr4.3:594217-594236 | None:intergenic | 25.0% |
| !!! | ATATTTTTAAGGACATGCAA+GGG | - | chr4.3:593117-593136 | None:intergenic | 25.0% |
| !!! | ATTTTTAGATTATGCTCACT+TGG | - | chr4.3:593900-593919 | None:intergenic | 25.0% |
| !!! | ATTTTTCAATGTTTGCATCA+GGG | + | chr4.3:597581-597600 | MS.gene95892:CDS | 25.0% |
| !!! | GTCACAACAATATTAGTTTT+TGG | - | chr4.3:596901-596920 | None:intergenic | 25.0% |
| !!! | TATGTCTGGTTTTGATAATA+AGG | + | chr4.3:596433-596452 | MS.gene95892:CDS | 25.0% |
| !!! | TCATTTTAACTTGTAGGTTA+TGG | + | chr4.3:595284-595303 | MS.gene95892:intron | 25.0% |
| !!! | TTGCGGATATTTTTAAAATG+TGG | - | chr4.3:593352-593371 | None:intergenic | 25.0% |
| AAATGACTAGTATAGCAAAG+GGG | - | chr4.3:595946-595965 | None:intergenic | 30.0% | |
| AATAAATCTCATTCAAGGTG+GGG | + | chr4.3:595731-595750 | MS.gene95892:intron | 30.0% | |
| AATCAGATATAGGGAATGTT+TGG | - | chr4.3:592618-592637 | None:intergenic | 30.0% | |
| ACGATCTAGTAAAGAGAAAA+GGG | - | chr4.3:593432-593451 | None:intergenic | 30.0% | |
| AGAAATGACTAGTATAGCAA+AGG | - | chr4.3:595948-595967 | None:intergenic | 30.0% | |
| AGAGACAAATACGTGAAAAT+GGG | - | chr4.3:594948-594967 | None:intergenic | 30.0% | |
| ATAACAAAAGACACACACAT+AGG | + | chr4.3:594001-594020 | MS.gene95892:intron | 30.0% | |
| ATAAGAACAAACCAAAACAG+AGG | - | chr4.3:594611-594630 | None:intergenic | 30.0% | |
| ATAATATCTTGGGACTAAGA+AGG | - | chr4.3:597027-597046 | None:intergenic | 30.0% | |
| ATATGTGTATGTCTTGAACT+GGG | - | chr4.3:593983-594002 | None:intergenic | 30.0% | |
| ATATTTAGCAATTAGTGTGC+GGG | + | chr4.3:597125-597144 | MS.gene95892:intron | 30.0% | |
| ATGATGGCTTAATAGTTAAG+TGG | + | chr4.3:596324-596343 | MS.gene95892:CDS | 30.0% | |
| CATAGAAGTTATTCAAGCTA+AGG | + | chr4.3:595146-595165 | MS.gene95892:intron | 30.0% | |
| CATATAGATTGAAAAGGAGA+TGG | - | chr4.3:594973-594992 | None:intergenic | 30.0% | |
| CATTCATTACTAGATCAGTT+TGG | + | chr4.3:596874-596893 | MS.gene95892:intron | 30.0% | |
| CCAAATCAAATTGGAGAAAA+TGG | - | chr4.3:596524-596543 | None:intergenic | 30.0% | |
| CGAGATTGCTTAAATCTAAA+GGG | - | chr4.3:592895-592914 | None:intergenic | 30.0% | |
| CTATATCGTAGTTCTTTAGT+TGG | + | chr4.3:592698-592717 | MS.gene95892:intron | 30.0% | |
| CTGCACATATATTCTATTTC+TGG | + | chr4.3:597487-597506 | MS.gene95892:CDS | 30.0% | |
| GAAATGACTAGTATAGCAAA+GGG | - | chr4.3:595947-595966 | None:intergenic | 30.0% | |
| GACTAAAACTCTCCAATATA+TGG | - | chr4.3:595700-595719 | None:intergenic | 30.0% | |
| GAGAAATGTTCCGTATTAAT+TGG | - | chr4.3:596958-596977 | None:intergenic | 30.0% | |
| GATATAGCGGTAAATTACAA+AGG | + | chr4.3:596360-596379 | MS.gene95892:CDS | 30.0% | |
| GATATTTAGCAATTAGTGTG+CGG | + | chr4.3:597124-597143 | MS.gene95892:intron | 30.0% | |
| GATGCAAACATTGAAAAATC+TGG | - | chr4.3:597580-597599 | None:intergenic | 30.0% | |
| GCTAACTTATGATCGTTATT+TGG | - | chr4.3:594268-594287 | None:intergenic | 30.0% | |
| GGAGAGAAACTTATATAAGT+CGG | - | chr4.3:593040-593059 | None:intergenic | 30.0% | |
| GGCTAATAGAAATACCATAA+AGG | + | chr4.3:598048-598067 | MS.gene95892:CDS | 30.0% | |
| GTTGTGTCAATCATTAATCT+TGG | + | chr4.3:597394-597413 | MS.gene95892:CDS | 30.0% | |
| TAGAAGTTATTCAAGCTAAG+GGG | + | chr4.3:595148-595167 | MS.gene95892:intron | 30.0% | |
| TATATGTGTATGTCTTGAAC+TGG | - | chr4.3:593984-594003 | None:intergenic | 30.0% | |
| TCAGTTGTAATGTTATCGTT+AGG | + | chr4.3:596010-596029 | MS.gene95892:intron | 30.0% | |
| TGAATGATTCATGGATACTT+TGG | - | chr4.3:593929-593948 | None:intergenic | 30.0% | |
| TGAATTCTCATTAGACGTTA+GGG | + | chr4.3:593376-593395 | MS.gene95892:intron | 30.0% | |
| TGCATCTATGATATTCTAAC+CGG | - | chr4.3:594322-594341 | None:intergenic | 30.0% | |
| ! | ACTAATGTTGGTGAATTTGA+TGG | + | chr4.3:592769-592788 | MS.gene95892:CDS | 30.0% |
| ! | CACATTTTGAATGCAAACTA+TGG | + | chr4.3:595121-595140 | MS.gene95892:intron | 30.0% |
| ! | CATTGGTTGTTTGAGTTTAT+TGG | + | chr4.3:593242-593261 | MS.gene95892:intron | 30.0% |
| ! | CCATTTTCTCCAATTTGATT+TGG | + | chr4.3:596521-596540 | MS.gene95892:intron | 30.0% |
| ! | CTTTTCATATTCCTCTGTTT+TGG | + | chr4.3:594597-594616 | MS.gene95892:intron | 30.0% |
| ! | CTTTTGGATTTCCCATATAT+TGG | + | chr4.3:595685-595704 | MS.gene95892:intron | 30.0% |
| ! | GAAATCCAAAAGTACATTCA+CGG | - | chr4.3:595677-595696 | None:intergenic | 30.0% |
| ! | GTTTTGCTTATACTCTTTGA+CGG | + | chr4.3:596461-596480 | MS.gene95892:intron | 30.0% |
| ! | TTTGGAGTTGATTCTTTCAA+AGG | - | chr4.3:594250-594269 | None:intergenic | 30.0% |
| ! | TTTTACTTTACTGATGACAC+GGG | - | chr4.3:594216-594235 | None:intergenic | 30.0% |
| !! | AAAAAGGGTATCATATTCGA+TGG | + | chr4.3:594774-594793 | MS.gene95892:CDS | 30.0% |
| !! | ATAACATTGATAGTGTAGTG+TGG | - | chr4.3:594054-594073 | None:intergenic | 30.0% |
| !! | CATATTTTTAAGGACATGCA+AGG | - | chr4.3:593118-593137 | None:intergenic | 30.0% |
| !! | GATTTTTCAATGTTTGCATC+AGG | + | chr4.3:597580-597599 | MS.gene95892:CDS | 30.0% |
| !! | GTTATGGTTTGTTTGTTATC+TGG | + | chr4.3:595300-595319 | MS.gene95892:intron | 30.0% |
| !! | GTTGTTTTCATAAGTTATCC+TGG | + | chr4.3:592475-592494 | MS.gene95892:intron | 30.0% |
| !! | TACTAGTACTACTTTTGAAC+CGG | + | chr4.3:597654-597673 | MS.gene95892:intron | 30.0% |
| !! | TAGTGTGGTCTTTTGTTATA+TGG | - | chr4.3:594039-594058 | None:intergenic | 30.0% |
| !! | TGCTAGTTTACTGAGATTTT+TGG | + | chr4.3:595444-595463 | MS.gene95892:intron | 30.0% |
| !! | TTTGGGAGAATGTTTTTGAA+GGG | + | chr4.3:595552-595571 | MS.gene95892:intron | 30.0% |
| !! | TTTTGGGAGAATGTTTTTGA+AGG | + | chr4.3:595551-595570 | MS.gene95892:intron | 30.0% |
| !! | TTTTTCAATGTTTGCATCAG+GGG | + | chr4.3:597582-597601 | MS.gene95892:CDS | 30.0% |
| !!! | CAATGAATTCGTTTTGAAGA+AGG | + | chr4.3:592061-592080 | MS.gene95892:CDS | 30.0% |
| !!! | GAGAAGTCTTCACTTTTTTT+GGG | + | chr4.3:595535-595554 | MS.gene95892:intron | 30.0% |
| !!! | GATTTGCACATTTGTTTTGA+AGG | - | chr4.3:593583-593602 | None:intergenic | 30.0% |
| !!! | GTTATTTTTATAAGCTGTCC+AGG | - | chr4.3:592496-592515 | None:intergenic | 30.0% |
| !!! | TGTTTGTTATCTGGTCTTTT+GGG | + | chr4.3:595309-595328 | MS.gene95892:intron | 30.0% |
| !!! | TTAGGTTTTGTTTGAGAGTT+TGG | - | chr4.3:595823-595842 | None:intergenic | 30.0% |
| !!! | TTGCTCTCATTTTAACTTGT+AGG | + | chr4.3:595278-595297 | MS.gene95892:intron | 30.0% |
| !!! | TTGTTTGTTATCTGGTCTTT+TGG | + | chr4.3:595308-595327 | MS.gene95892:intron | 30.0% |
| AAAAATGTATATGACCCGTG+CGG | - | chr4.3:593467-593486 | None:intergenic | 35.0% | |
| AAAGGAAATGAAGGAGTAAG+AGG | - | chr4.3:597205-597224 | None:intergenic | 35.0% | |
| AAGTGAGGATGATGTACAAT+CGG | - | chr4.3:594401-594420 | None:intergenic | 35.0% | |
| AATGACTAGTATAGCAAAGG+GGG | - | chr4.3:595945-595964 | None:intergenic | 35.0% | |
| AATTGCACCATGAAATTGGA+GGG | - | chr4.3:594151-594170 | None:intergenic | 35.0% | |
| AATTTCTGCAATGGATAGGT+GGG | + | chr4.3:592738-592757 | MS.gene95892:intron | 35.0% | |
| ACGGAACATTTCTCTCTATA+CGG | + | chr4.3:596964-596983 | MS.gene95892:intron | 35.0% | |
| ACTGTGATCAATTTCTGCAA+TGG | + | chr4.3:592729-592748 | MS.gene95892:intron | 35.0% | |
| AGTGCAACACTAAAATCCTT+TGG | - | chr4.3:597310-597329 | None:intergenic | 35.0% | |
| ATAAATCTCATTCAAGGTGG+GGG | + | chr4.3:595732-595751 | MS.gene95892:intron | 35.0% | |
| ATCATATTCGATGGAAAGAC+TGG | + | chr4.3:594783-594802 | MS.gene95892:CDS | 35.0% | |
| ATCATGGCTATGTCATTCTT+TGG | + | chr4.3:592333-592352 | MS.gene95892:intron | 35.0% | |
| ATGCATGTCTTGATATTACG+TGG | + | chr4.3:597068-597087 | MS.gene95892:intron | 35.0% | |
| ATTAGACGTTAGGGTAAAAC+TGG | + | chr4.3:593385-593404 | MS.gene95892:intron | 35.0% | |
| ATTCAAGGGATTGGATATAG+CGG | + | chr4.3:596347-596366 | MS.gene95892:CDS | 35.0% | |
| ATTCATCATGATAACCGATC+TGG | - | chr4.3:591910-591929 | None:intergenic | 35.0% | |
| ATTGAAACTAGAGCAAGTTC+AGG | - | chr4.3:597340-597359 | None:intergenic | 35.0% | |
| CAATTTCATGGTGCAATTCA+GGG | + | chr4.3:594153-594172 | MS.gene95892:intron | 35.0% | |
| CAGGAAACAAAGTGAAAACA+CGG | + | chr4.3:597738-597757 | MS.gene95892:intron | 35.0% | |
| CGATCTAGTAAAGAGAAAAG+GGG | - | chr4.3:593431-593450 | None:intergenic | 35.0% | |
| CTATGTCATTCTTTGGACTT+TGG | + | chr4.3:592340-592359 | MS.gene95892:intron | 35.0% | |
| CTGAATTCTCATTAGACGTT+AGG | + | chr4.3:593375-593394 | MS.gene95892:intron | 35.0% | |
| GAAGAAGAGATTGTTATGTC+TGG | + | chr4.3:596419-596438 | MS.gene95892:CDS | 35.0% | |
| GAAGATAAAGGAGGAGTAAA+GGG | - | chr4.3:595778-595797 | None:intergenic | 35.0% | |
| GACATATCTGAGGATAACAT+TGG | + | chr4.3:596071-596090 | MS.gene95892:CDS | 35.0% | |
| GACGATCTAGTAAAGAGAAA+AGG | - | chr4.3:593433-593452 | None:intergenic | 35.0% | |
| GAGAGACAAATACGTGAAAA+TGG | - | chr4.3:594949-594968 | None:intergenic | 35.0% | |
| GATATAGGGAATGTTTGGAT+TGG | - | chr4.3:592613-592632 | None:intergenic | 35.0% | |
| GATCAATTTCTGCAATGGAT+AGG | + | chr4.3:592734-592753 | MS.gene95892:intron | 35.0% | |
| GATTGCTTAAATCTAAAGGG+AGG | - | chr4.3:592892-592911 | None:intergenic | 35.0% | |
| GCGAGATTGCTTAAATCTAA+AGG | - | chr4.3:592896-592915 | None:intergenic | 35.0% | |
| GTTACAAATTTACTGCCATC+TGG | - | chr4.3:594741-594760 | None:intergenic | 35.0% | |
| GTTCTCATTAGATGTTGTGT+TGG | - | chr4.3:593297-593316 | None:intergenic | 35.0% | |
| GTTGTGCTTATAAACCTACA+AGG | + | chr4.3:592812-592831 | MS.gene95892:CDS | 35.0% | |
| TAGCGGTAAATTACAAAGGA+AGG | + | chr4.3:596364-596383 | MS.gene95892:CDS | 35.0% | |
| TAGTACTAGTACTCACATCT+CGG | - | chr4.3:597645-597664 | None:intergenic | 35.0% | |
| TCAGAAGAGAAAGGAAATGA+AGG | - | chr4.3:597214-597233 | None:intergenic | 35.0% | |
| TCGTTATTTAAAGGTCAGCT+TGG | - | chr4.3:597807-597826 | None:intergenic | 35.0% | |
| TGAAGATAAAGGAGGAGTAA+AGG | - | chr4.3:595779-595798 | None:intergenic | 35.0% | |
| TGAAGATCAGATGTCTAACA+GGG | - | chr4.3:595993-596012 | None:intergenic | 35.0% | |
| TGAATTCTCATTAGACGTCA+GGG | + | chr4.3:594509-594528 | MS.gene95892:intron | 35.0% | |
| TGATTCTTTCAAAGGACACA+AGG | - | chr4.3:594242-594261 | None:intergenic | 35.0% | |
| TTAAATGCAAACGACAAGCA+AGG | - | chr4.3:596560-596579 | None:intergenic | 35.0% | |
| TTAATCGAGAAGCTGTTGTT+TGG | + | chr4.3:597608-597627 | MS.gene95892:CDS | 35.0% | |
| TTAGACGTTAGGGTAAAACT+GGG | + | chr4.3:593386-593405 | MS.gene95892:intron | 35.0% | |
| TTAGATTTAAGCAATCTCGC+AGG | + | chr4.3:592896-592915 | MS.gene95892:CDS | 35.0% | |
| TTTCCCTTCACAAAAATGCA+TGG | - | chr4.3:593061-593080 | None:intergenic | 35.0% | |
| ! | AAAAGTATGGGACATATCTG+AGG | + | chr4.3:596061-596080 | MS.gene95892:CDS | 35.0% |
| ! | ACCCTTTTTGTCAGAACTAA+CGG | - | chr4.3:594763-594782 | None:intergenic | 35.0% |
| ! | ATACATAAAAGCGCGAACAA+AGG | - | chr4.3:592177-592196 | None:intergenic | 35.0% |
| ! | ATGGTATTTCTATTAGCCAC+AGG | - | chr4.3:598046-598065 | None:intergenic | 35.0% |
| ! | GAATATAGTTTGGTTAGCTC+AGG | + | chr4.3:598112-598131 | MS.gene95892:CDS | 35.0% |
| ! | GCTCTAGTTTCAATTGATTC+AGG | + | chr4.3:597346-597365 | MS.gene95892:CDS | 35.0% |
| ! | GTTACTTCTGAGAATGGTTA+AGG | - | chr4.3:596279-596298 | None:intergenic | 35.0% |
| ! | GTTGTTTGAGTTTATTGGAG+TGG | + | chr4.3:593247-593266 | MS.gene95892:intron | 35.0% |
| ! | TAATCGAGAAGCTGTTGTTT+GGG | + | chr4.3:597609-597628 | MS.gene95892:CDS | 35.0% |
| ! | TATCTTGTCACTGTTTCTCT+TGG | + | chr4.3:596173-596192 | MS.gene95892:CDS | 35.0% |
| ! | TATTTCTATTAGCCACAGGT+TGG | - | chr4.3:598042-598061 | None:intergenic | 35.0% |
| ! | TCTCCATGCATTTTTGTGAA+GGG | + | chr4.3:593055-593074 | MS.gene95892:intron | 35.0% |
| ! | TGACAAGTCTGCAAAAGTAT+GGG | + | chr4.3:596049-596068 | MS.gene95892:CDS | 35.0% |
| ! | TGATGTACAATCGGATTTTC+TGG | - | chr4.3:594392-594411 | None:intergenic | 35.0% |
| ! | TTTATTGATTATGGCAGGTC+TGG | + | chr4.3:594910-594929 | MS.gene95892:intron | 35.0% |
| ! | TTTGTTATATGGAGTGTACC+AGG | - | chr4.3:594028-594047 | None:intergenic | 35.0% |
| !! | AACCGTTAGTTCTGACAAAA+AGG | + | chr4.3:594758-594777 | MS.gene95892:CDS | 35.0% |
| !! | ACCGTTAGTTCTGACAAAAA+GGG | + | chr4.3:594759-594778 | MS.gene95892:CDS | 35.0% |
| !! | TAGCTTACTTGTTTTCCATC+AGG | - | chr4.3:594876-594895 | None:intergenic | 35.0% |
| !!! | AACAGTCTAAGGCTTTGTTT+TGG | + | chr4.3:595470-595489 | MS.gene95892:intron | 35.0% |
| !!! | ATTTTTGGCACAACAGTCTA+AGG | + | chr4.3:595459-595478 | MS.gene95892:intron | 35.0% |
| !!! | GGAGAAGTCTTCACTTTTTT+TGG | + | chr4.3:595534-595553 | MS.gene95892:intron | 35.0% |
| !!! | GTTTTGTTTGAGAGTTTGGA+GGG | - | chr4.3:595819-595838 | None:intergenic | 35.0% |
| !!! | TAAGGCTTTGTTTTGGAGTT+TGG | + | chr4.3:595477-595496 | MS.gene95892:intron | 35.0% |
| AACTCAAAACTCGTCTTGAG+TGG | - | chr4.3:592795-592814 | None:intergenic | 40.0% | |
| AACTGGTTGTCAGAAGAGAA+AGG | - | chr4.3:597223-597242 | None:intergenic | 40.0% | |
| AAGGAGTTTCGTGTTCTTTC+TGG | + | chr4.3:592080-592099 | MS.gene95892:CDS | 40.0% | |
| AAGTGATCTTGATAAAGCCC+TGG | + | chr4.3:596220-596239 | MS.gene95892:CDS | 40.0% | |
| ACGTCGCAATGATGTACAAT+CGG | - | chr4.3:594447-594466 | None:intergenic | 40.0% | |
| AGCCATCATAACTACAAGAC+AGG | - | chr4.3:596313-596332 | None:intergenic | 40.0% | |
| AGTACTAGTACTCACATCTC+GGG | - | chr4.3:597644-597663 | None:intergenic | 40.0% | |
| AGTGCTTCATGGAGATTTCT+AGG | - | chr4.3:596657-596676 | None:intergenic | 40.0% | |
| AGTTATTCAAGCTAAGGGGT+AGG | + | chr4.3:595152-595171 | MS.gene95892:intron | 40.0% | |
| AGTTTCGTGTTCTTTCTGGA+AGG | + | chr4.3:592084-592103 | MS.gene95892:CDS | 40.0% | |
| ATAAAGGAGGAGTAAAGGGA+AGG | - | chr4.3:595774-595793 | None:intergenic | 40.0% | |
| ATATGAGATTGACCAACCTG+TGG | + | chr4.3:598027-598046 | MS.gene95892:CDS | 40.0% | |
| ATTAGACGTCAGGGTAAAAC+TGG | + | chr4.3:594518-594537 | MS.gene95892:intron | 40.0% | |
| ATTGCACCATGAAATTGGAG+GGG | - | chr4.3:594150-594169 | None:intergenic | 40.0% | |
| CAAGATAATCGTTCAACCAC+AGG | - | chr4.3:596160-596179 | None:intergenic | 40.0% | |
| CAATTTCTGCAATGGATAGG+TGG | + | chr4.3:592737-592756 | MS.gene95892:intron | 40.0% | |
| CACACGAGACAATTTCTGAT+TGG | + | chr4.3:596759-596778 | MS.gene95892:intron | 40.0% | |
| CACGGATAAATTGTCTTGCT+TGG | + | chr4.3:597951-597970 | MS.gene95892:CDS | 40.0% | |
| CAGCATAAATACTGCCAGTA+TGG | - | chr4.3:594842-594861 | None:intergenic | 40.0% | |
| CCAATTTCATGGTGCAATTC+AGG | + | chr4.3:594152-594171 | MS.gene95892:intron | 40.0% | |
| CCTGAATTGCACCATGAAAT+TGG | - | chr4.3:594155-594174 | None:intergenic | 40.0% | |
| CGGAACATTTCTCTCTATAC+GGG | + | chr4.3:596965-596984 | MS.gene95892:intron | 40.0% | |
| CTCCTGTCTTGTAGTTATGA+TGG | + | chr4.3:596308-596327 | MS.gene95892:CDS | 40.0% | |
| CTGAAGATCAGATGTCTAAC+AGG | - | chr4.3:595994-596013 | None:intergenic | 40.0% | |
| CTGAATTCTCATTAGACGTC+AGG | + | chr4.3:594508-594527 | MS.gene95892:intron | 40.0% | |
| CTGACAAGTCTGCAAAAGTA+TGG | + | chr4.3:596048-596067 | MS.gene95892:CDS | 40.0% | |
| GAATTGCACCATGAAATTGG+AGG | - | chr4.3:594152-594171 | None:intergenic | 40.0% | |
| GACAATTTATCCGTGCAGTA+TGG | - | chr4.3:597946-597965 | None:intergenic | 40.0% | |
| GAGTTGAAGACATGCTTGTA+GGG | + | chr4.3:596132-596151 | MS.gene95892:CDS | 40.0% | |
| GATGGAAGTGAAGCCATTAT+TGG | + | chr4.3:597448-597467 | MS.gene95892:CDS | 40.0% | |
| GCAGTATTTATGCTGTTAGC+TGG | + | chr4.3:594847-594866 | MS.gene95892:CDS | 40.0% | |
| GGATCCTTCTTGTATCGTTA+CGG | + | chr4.3:593830-593849 | MS.gene95892:intron | 40.0% | |
| GTATGGTGTGAGAAACTCAA+TGG | + | chr4.3:592918-592937 | MS.gene95892:intron | 40.0% | |
| TAAAGGAGGAGTAAAGGGAA+GGG | - | chr4.3:595773-595792 | None:intergenic | 40.0% | |
| TAAGTTAGCGTCTGTGATGA+AGG | + | chr4.3:594279-594298 | MS.gene95892:intron | 40.0% | |
| TAGCAATCCTACTGCTATCA+GGG | - | chr4.3:597979-597998 | None:intergenic | 40.0% | |
| TCATCCGTAACGATACAAGA+AGG | - | chr4.3:593837-593856 | None:intergenic | 40.0% | |
| TCTCTTCTGACAACCAGTTA+AGG | + | chr4.3:597224-597243 | MS.gene95892:intron | 40.0% | |
| TGATATCGGAAGTCAACCAA+AGG | + | chr4.3:597291-597310 | MS.gene95892:CDS | 40.0% | |
| TGTGTGAGATATTCTCCAGA+TGG | + | chr4.3:594723-594742 | MS.gene95892:CDS | 40.0% | |
| TTAGACGTCAGGGTAAAACT+GGG | + | chr4.3:594519-594538 | MS.gene95892:intron | 40.0% | |
| TTTAAGCAATCTCGCAGGTA+TGG | + | chr4.3:592901-592920 | MS.gene95892:intron | 40.0% | |
| ! | ACTTCTGAGAATGGTTAAGG+AGG | - | chr4.3:596276-596295 | None:intergenic | 40.0% |
| ! | AGAAATCTCCATGAAGCACT+TGG | + | chr4.3:596657-596676 | MS.gene95892:intron | 40.0% |
| ! | ATCCAAAAGTACATTCACGG+AGG | - | chr4.3:595674-595693 | None:intergenic | 40.0% |
| ! | ATTTTCACCCAACGGTGAAT+GGG | + | chr4.3:591992-592011 | MS.gene95892:CDS | 40.0% |
| ! | CTCTCCATGCATTTTTGTGA+AGG | + | chr4.3:593054-593073 | MS.gene95892:intron | 40.0% |
| ! | GTTAAGTGGATTCAAGGGAT+TGG | + | chr4.3:596338-596357 | MS.gene95892:CDS | 40.0% |
| ! | TAAGGCGGGTTTCTTTACAT+GGG | + | chr4.3:597242-597261 | MS.gene95892:CDS | 40.0% |
| ! | TCCAAAAGTACATTCACGGA+GGG | - | chr4.3:595673-595692 | None:intergenic | 40.0% |
| ! | TCTAGGGTTACTTCTGAGAA+TGG | - | chr4.3:596285-596304 | None:intergenic | 40.0% |
| ! | TGGTGATACACTTGTTGAAG+AGG | + | chr4.3:597507-597526 | MS.gene95892:CDS | 40.0% |
| ! | TGGTTGACTTCCGATATCAA+CGG | - | chr4.3:597290-597309 | None:intergenic | 40.0% |
| ! | TTAAGGCGGGTTTCTTTACA+TGG | + | chr4.3:597241-597260 | MS.gene95892:CDS | 40.0% |
| ! | TTGTCACTGTTTCTCTTGGT+GGG | + | chr4.3:596177-596196 | MS.gene95892:CDS | 40.0% |
| !! | AAAATTGGTGCTACAGCAGT+TGG | - | chr4.3:594096-594115 | None:intergenic | 40.0% |
| !! | AAATTGGTGCTACAGCAGTT+GGG | - | chr4.3:594095-594114 | None:intergenic | 40.0% |
| !! | ACATTGATTTGTTCTGCCTC+TGG | + | chr4.3:596107-596126 | MS.gene95892:CDS | 40.0% |
| !!! | GGTTTTGTTTGAGAGTTTGG+AGG | - | chr4.3:595820-595839 | None:intergenic | 40.0% |
| AAAGACACACACATAGGACC+TGG | + | chr4.3:594007-594026 | MS.gene95892:intron | 45.0% | |
| AAAGACTGGAGAGAAGATCG+GGG | + | chr4.3:594797-594816 | MS.gene95892:CDS | 45.0% | |
| ACATGCTGTACCATACTGCA+CGG | + | chr4.3:597933-597952 | MS.gene95892:CDS | 45.0% | |
| ACCATCCTGACCACCAATAA+TGG | - | chr4.3:597464-597483 | None:intergenic | 45.0% | |
| ACCTAAGTGAGCACCCTTTA+TGG | - | chr4.3:598065-598084 | None:intergenic | 45.0% | |
| AGCAATCCTACTGCTATCAG+GGG | - | chr4.3:597978-597997 | None:intergenic | 45.0% | |
| AGGCTGTCCTTGAGAAACAT+AGG | + | chr4.3:597527-597546 | MS.gene95892:CDS | 45.0% | |
| AGTGTGCGGGACAAATTTCA+TGG | + | chr4.3:597138-597157 | MS.gene95892:intron | 45.0% | |
| ATGTCCTGAAAACGATGCCA+GGG | - | chr4.3:596240-596259 | None:intergenic | 45.0% | |
| CAATGGATAGGTGGGATTCT+GGG | + | chr4.3:592746-592765 | MS.gene95892:intron | 45.0% | |
| CATGATAACCGATCTGGCAT+TGG | - | chr4.3:591904-591923 | None:intergenic | 45.0% | |
| CTCACTTAGGTGGGGTTTAT+GGG | + | chr4.3:598074-598093 | MS.gene95892:CDS | 45.0% | |
| CTTCTGACAACCAGTTAAGG+CGG | + | chr4.3:597227-597246 | MS.gene95892:intron | 45.0% | |
| GAAAGACTGGAGAGAAGATC+GGG | + | chr4.3:594796-594815 | MS.gene95892:CDS | 45.0% | |
| GAAGGATCGATGATCTTCAG+TGG | + | chr4.3:592102-592121 | MS.gene95892:CDS | 45.0% | |
| GACAAGAAAATCCTCTCCAC+AGG | - | chr4.3:592854-592873 | None:intergenic | 45.0% | |
| GATAGCAGTAGGATTGCTAC+AGG | + | chr4.3:597980-597999 | MS.gene95892:CDS | 45.0% | |
| GATGCTGAAGCCGTTGATAT+CGG | + | chr4.3:597277-597296 | MS.gene95892:CDS | 45.0% | |
| GCGACAATTCTGATACCATC+AGG | - | chr4.3:592131-592150 | None:intergenic | 45.0% | |
| GCTGTCCTTGAGAAACATAG+GGG | + | chr4.3:597529-597548 | MS.gene95892:CDS | 45.0% | |
| GGAAAGACTGGAGAGAAGAT+CGG | + | chr4.3:594795-594814 | MS.gene95892:CDS | 45.0% | |
| GGAAGTGAAGCCATTATTGG+TGG | + | chr4.3:597451-597470 | MS.gene95892:CDS | 45.0% | |
| GGAGTTGAAGACATGCTTGT+AGG | + | chr4.3:596131-596150 | MS.gene95892:CDS | 45.0% | |
| GGAGTTTGGAGGAAAACAGT+GGG | + | chr4.3:595491-595510 | MS.gene95892:intron | 45.0% | |
| GGCTGTCCTTGAGAAACATA+GGG | + | chr4.3:597528-597547 | MS.gene95892:CDS | 45.0% | |
| GTAAAGAAACCCGCCTTAAC+TGG | - | chr4.3:597240-597259 | None:intergenic | 45.0% | |
| GTAAGCATGTTCGCCATAGA+CGG | - | chr4.3:591955-591974 | None:intergenic | 45.0% | |
| GTAGCAATCCTACTGCTATC+AGG | - | chr4.3:597980-597999 | None:intergenic | 45.0% | |
| TAGCACCCCTATGTTTCTCA+AGG | - | chr4.3:597537-597556 | None:intergenic | 45.0% | |
| TATGTCCTGAAAACGATGCC+AGG | - | chr4.3:596241-596260 | None:intergenic | 45.0% | |
| TCTAACCCCCTCCAATTTCA+TGG | + | chr4.3:594141-594160 | MS.gene95892:intron | 45.0% | |
| TCTTTACATGGGGATCAGTG+CGG | + | chr4.3:597253-597272 | MS.gene95892:CDS | 45.0% | |
| TGGAGTTTGGAGGAAAACAG+TGG | + | chr4.3:595490-595509 | MS.gene95892:intron | 45.0% | |
| TGGTGTGAGAAACTCAATGG+CGG | + | chr4.3:592921-592940 | MS.gene95892:intron | 45.0% | |
| TGTTTGAGAGTTTGGAGGGA+GGG | - | chr4.3:595815-595834 | None:intergenic | 45.0% | |
| TTCTGACAACCAGTTAAGGC+GGG | + | chr4.3:597228-597247 | MS.gene95892:intron | 45.0% | |
| TTGCACCATGAAATTGGAGG+GGG | - | chr4.3:594149-594168 | None:intergenic | 45.0% | |
| TTGTTTGAGAGTTTGGAGGG+AGG | - | chr4.3:595816-595835 | None:intergenic | 45.0% | |
| TTTGGAGGAAAACAGTGGGA+GGG | + | chr4.3:595495-595514 | MS.gene95892:intron | 45.0% | |
| ! | AAGGCGGGTTTCTTTACATG+GGG | + | chr4.3:597243-597262 | MS.gene95892:CDS | 45.0% |
| ! | ACAATGCGAAAAGGCCTTGT+AGG | - | chr4.3:592829-592848 | None:intergenic | 45.0% |
| ! | AGGATGCTTTTATCCGTGTC+TGG | + | chr4.3:598137-598156 | MS.gene95892:CDS | 45.0% |
| ! | ATTGGTGTAGGTGATGGTGT+TGG | - | chr4.3:591886-591905 | None:intergenic | 45.0% |
| ! | CTTGTCACTGTTTCTCTTGG+TGG | + | chr4.3:596176-596195 | MS.gene95892:CDS | 45.0% |
| ! | GATTTTCACCCAACGGTGAA+TGG | + | chr4.3:591991-592010 | MS.gene95892:CDS | 45.0% |
| ! | GGTATCAGAATTGTCGCTTC+TGG | + | chr4.3:592134-592153 | MS.gene95892:CDS | 45.0% |
| ! | GTAGGTGATGGTGTTGGATT+TGG | - | chr4.3:591880-591899 | None:intergenic | 45.0% |
| ! | TGAAGCCATTATTGGTGGTC+AGG | + | chr4.3:597456-597475 | MS.gene95892:CDS | 45.0% |
| !! | ACCATAAAGGGTGCTCACTT+AGG | + | chr4.3:598061-598080 | MS.gene95892:CDS | 45.0% |
| !! | ATAAAGGGTGCTCACTTAGG+TGG | + | chr4.3:598064-598083 | MS.gene95892:CDS | 45.0% |
| !! | GGGGTGCTATTAGTGTCATA+CGG | + | chr4.3:597548-597567 | MS.gene95892:CDS | 45.0% |
| !! | TAAAGGGTGCTCACTTAGGT+GGG | + | chr4.3:598065-598084 | MS.gene95892:CDS | 45.0% |
| !! | TACAAGACAGGAGCACTCTA+GGG | - | chr4.3:596301-596320 | None:intergenic | 45.0% |
| !! | TGGGATTCTGGGACTAATGT+TGG | + | chr4.3:592757-592776 | MS.gene95892:CDS | 45.0% |
| !! | TTGATTTGTTCTGCCTCTGG+TGG | + | chr4.3:596110-596129 | MS.gene95892:CDS | 45.0% |
| !!! | GGCTTTGTTTTGGAGTTTGG+AGG | + | chr4.3:595480-595499 | MS.gene95892:intron | 45.0% |
| !! | TTTATAAAAAAAAAAGTTAT+TGG | - | chr4.3:593533-593552 | None:intergenic | 5.0% |
| !!! | AAATTATTTTTTAAAAAACA+TGG | + | chr4.3:593809-593828 | MS.gene95892:intron | 5.0% |
| ACTAGTACTCACATCTCGGG+AGG | - | chr4.3:597641-597660 | None:intergenic | 50.0% | |
| AGATGCAACCCATTCACCGT+TGG | - | chr4.3:592003-592022 | None:intergenic | 50.0% | |
| AGTACATTCACGGAGGGCTT+TGG | - | chr4.3:595667-595686 | None:intergenic | 50.0% | |
| ATCGGGGAGTTGTCTTCTGA+AGG | + | chr4.3:594813-594832 | MS.gene95892:CDS | 50.0% | |
| CACCTACACCAATGCCAGAT+CGG | + | chr4.3:591893-591912 | MS.gene95892:CDS | 50.0% | |
| CATAGACGGAGACATGAAGG+GGG | - | chr4.3:591941-591960 | None:intergenic | 50.0% | |
| CATGTCTTCAACTCCACCAG+AGG | - | chr4.3:596126-596145 | None:intergenic | 50.0% | |
| CCACAGGTGACAATGCGAAA+AGG | - | chr4.3:592838-592857 | None:intergenic | 50.0% | |
| CCATAGACGGAGACATGAAG+GGG | - | chr4.3:591942-591961 | None:intergenic | 50.0% | |
| CTCTTCTTCTGCAGCTGCTA+AGG | - | chr4.3:596408-596427 | None:intergenic | 50.0% | |
| CTGATGACACGGGACATGTA+TGG | - | chr4.3:594206-594225 | None:intergenic | 50.0% | |
| GAGGAGTAAAGGGAAGGGAA+AGG | - | chr4.3:595768-595787 | None:intergenic | 50.0% | |
| GAGGGGAGGAAAGAAAAGGT+AGG | + | chr4.3:595513-595532 | MS.gene95892:intron | 50.0% | |
| GAGGGGTTATCTTCCAGACA+CGG | - | chr4.3:598153-598172 | None:intergenic | 50.0% | |
| GATCTTCAGTGGTCTCCTGA+TGG | + | chr4.3:592113-592132 | MS.gene95892:CDS | 50.0% | |
| GATGCAACCCATTCACCGTT+GGG | - | chr4.3:592002-592021 | None:intergenic | 50.0% | |
| GCAATGGATAGGTGGGATTC+TGG | + | chr4.3:592745-592764 | MS.gene95892:intron | 50.0% | |
| GCATCTGTTGTCTCGTCTGA+TGG | + | chr4.3:597430-597449 | MS.gene95892:CDS | 50.0% | |
| GCCATAGACGGAGACATGAA+GGG | - | chr4.3:591943-591962 | None:intergenic | 50.0% | |
| GCTCACTTAGGTGGGGTTTA+TGG | + | chr4.3:598073-598092 | MS.gene95892:CDS | 50.0% | |
| GGTAGCAAAGTGAGCTTACG+TGG | - | chr4.3:593331-593350 | None:intergenic | 50.0% | |
| GTCGCTTCTGGTGAAGCTAA+AGG | + | chr4.3:592146-592165 | MS.gene95892:CDS | 50.0% | |
| GTTGGGTGAAAATCGAGCGA+CGG | - | chr4.3:591985-592004 | None:intergenic | 50.0% | |
| GTTTGAGAGTTTGGAGGGAG+GGG | - | chr4.3:595814-595833 | None:intergenic | 50.0% | |
| GTTTGGAGGAAAACAGTGGG+AGG | + | chr4.3:595494-595513 | MS.gene95892:intron | 50.0% | |
| TGCACTAGCCAAGTGCTTCA+TGG | - | chr4.3:596668-596687 | None:intergenic | 50.0% | |
| TTGGAGGAAAACAGTGGGAG+GGG | + | chr4.3:595496-595515 | MS.gene95892:intron | 50.0% | |
| ! | AAAGCCCTGGCATCGTTTTC+AGG | + | chr4.3:596233-596252 | MS.gene95892:CDS | 50.0% |
| ! | CCTTTTCGCATTGTCACCTG+TGG | + | chr4.3:592835-592854 | MS.gene95892:CDS | 50.0% |
| ! | GCCATTATTGGTGGTCAGGA+TGG | + | chr4.3:597460-597479 | MS.gene95892:CDS | 50.0% |
| ! | GCCCTCCGTGAATGTACTTT+TGG | + | chr4.3:595669-595688 | MS.gene95892:intron | 50.0% |
| ! | GTCGCTCGATTTTCACCCAA+CGG | + | chr4.3:591984-592003 | MS.gene95892:CDS | 50.0% |
| ! | TAGTTTGGTTAGCTCAGGCG+AGG | + | chr4.3:598117-598136 | MS.gene95892:CDS | 50.0% |
| ! | TCTTCTGAAGGTGGCCATAC+TGG | + | chr4.3:594825-594844 | MS.gene95892:CDS | 50.0% |
| !! | AAAGGGTGCTCACTTAGGTG+GGG | + | chr4.3:598066-598085 | MS.gene95892:CDS | 50.0% |
| !! | AACCGATCTGGCATTGGTGT+AGG | - | chr4.3:591898-591917 | None:intergenic | 50.0% |
| !! | CTACAAGACAGGAGCACTCT+AGG | - | chr4.3:596302-596321 | None:intergenic | 50.0% |
| !! | GAGGGCTCTGAAGATAAAGG+AGG | - | chr4.3:595787-595806 | None:intergenic | 50.0% |
| !! | TCTGGCATTGGTGTAGGTGA+TGG | - | chr4.3:591892-591911 | None:intergenic | 50.0% |
| AAAATCGAGCGACGGTGGCA+GGG | - | chr4.3:591977-591996 | None:intergenic | 55.0% | |
| CCCCTTCATGTCTCCGTCTA+TGG | + | chr4.3:591939-591958 | MS.gene95892:CDS | 55.0% | |
| CGCCATAGACGGAGACATGA+AGG | - | chr4.3:591944-591963 | None:intergenic | 55.0% | |
| CGCCGGAGATGAGAATACCA+CGG | - | chr4.3:591854-591873 | None:intergenic | 55.0% | |
| CGGAGACATGAAGGGGGTTA+TGG | - | chr4.3:591935-591954 | None:intergenic | 55.0% | |
| CTTGGTCCCCTGATAGCAGT+AGG | + | chr4.3:597969-597988 | MS.gene95892:CDS | 55.0% | |
| GCTGTTAGCTGGAGTCCTGA+TGG | + | chr4.3:594858-594877 | MS.gene95892:CDS | 55.0% | |
| GGCCGTGGTATTCTCATCTC+CGG | + | chr4.3:591849-591868 | MS.gene95892:CDS | 55.0% | |
| GTGGGAGGGGAGGAAAGAAA+AGG | + | chr4.3:595509-595528 | MS.gene95892:intron | 55.0% | |
| GTTGCATCTGCTGACGTGTC+AGG | + | chr4.3:592014-592033 | MS.gene95892:CDS | 55.0% | |
| TACTCACATCTCGGGAGGCA+CGG | - | chr4.3:597636-597655 | None:intergenic | 55.0% | |
| TCAGGAGTTGTCATGCTGCG+TGG | + | chr4.3:597364-597383 | MS.gene95892:CDS | 55.0% | |
| TCGCATTGTCACCTGTGGAG+AGG | + | chr4.3:592840-592859 | MS.gene95892:CDS | 55.0% | |
| TGCACGCCTTCAACAGAACG+TGG | + | chr4.3:591828-591847 | MS.gene95892:CDS | 55.0% | |
| ! | ACATGCTTGTAGGGTGCCTG+TGG | + | chr4.3:596141-596160 | MS.gene95892:CDS | 55.0% |
| ! | ACGTTCTGTTGAAGGCGTGC+AGG | - | chr4.3:591829-591848 | None:intergenic | 55.0% |
| ! | GGGGAGTTGTCTTCTGAAGG+TGG | + | chr4.3:594816-594835 | MS.gene95892:CDS | 55.0% |
| ! | GGTGTTGGATTTGGAGTCGC+CGG | - | chr4.3:591871-591890 | None:intergenic | 55.0% |
| ! | GTCAGGTACCGTGAGGATCT+GGG | + | chr4.3:592031-592050 | MS.gene95892:CDS | 55.0% |
| ! | TCAGGTACCGTGAGGATCTG+GGG | + | chr4.3:592032-592051 | MS.gene95892:CDS | 55.0% |
| ! | TGTCAGGTACCGTGAGGATC+TGG | + | chr4.3:592030-592049 | MS.gene95892:CDS | 55.0% |
| !! | GGGGAGGGCTCTGAAGATAA+AGG | - | chr4.3:595790-595809 | None:intergenic | 55.0% |
| AGAGTTTGGAGGGAGGGGAG+GGG | - | chr4.3:595809-595828 | None:intergenic | 60.0% | |
| CCACGGCCACGTTCTGTTGA+AGG | - | chr4.3:591837-591856 | None:intergenic | 60.0% | |
| CCTTCAACAGAACGTGGCCG+TGG | + | chr4.3:591834-591853 | MS.gene95892:CDS | 60.0% | |
| CGTCTACCTATGCTGCCGCA+CGG | + | chr4.3:593449-593468 | MS.gene95892:intron | 60.0% | |
| GAAAATCGAGCGACGGTGGC+AGG | - | chr4.3:591978-591997 | None:intergenic | 60.0% | |
| GAGAGTTTGGAGGGAGGGGA+GGG | - | chr4.3:595810-595829 | None:intergenic | 60.0% | |
| GAGGAAAACAGTGGGAGGGG+AGG | + | chr4.3:595499-595518 | MS.gene95892:intron | 60.0% | |
| GCGAGTTCCCCAGATCCTCA+CGG | - | chr4.3:592042-592061 | None:intergenic | 60.0% | |
| GGGTGAAAATCGAGCGACGG+TGG | - | chr4.3:591982-592001 | None:intergenic | 60.0% | |
| GTCTACCTATGCTGCCGCAC+GGG | + | chr4.3:593450-593469 | MS.gene95892:intron | 60.0% | |
| TATGACCCGTGCGGCAGCAT+AGG | - | chr4.3:593458-593477 | None:intergenic | 60.0% | |
| TGAGAGTTTGGAGGGAGGGG+AGG | - | chr4.3:595811-595830 | None:intergenic | 60.0% | |
| ! | CTGACGTGTCAGGTACCGTG+AGG | + | chr4.3:592024-592043 | MS.gene95892:CDS | 60.0% |
| TTTGGAGGGAGGGGAGGGGA+GGG | - | chr4.3:595805-595824 | None:intergenic | 65.0% | |
| GTTTGGAGGGAGGGGAGGGG+AGG | - | chr4.3:595806-595825 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 591795 | 598177 | 591795 | ID=MS.gene95892 |
| chr4.3 | mRNA | 591795 | 598177 | 591795 | ID=MS.gene95892.t1;Parent=MS.gene95892 |
| chr4.3 | exon | 591795 | 592192 | 591795 | ID=MS.gene95892.t1.exon1;Parent=MS.gene95892.t1 |
| chr4.3 | CDS | 591795 | 592192 | 591795 | ID=cds.MS.gene95892.t1;Parent=MS.gene95892.t1 |
| chr4.3 | exon | 592756 | 592917 | 592756 | ID=MS.gene95892.t1.exon2;Parent=MS.gene95892.t1 |
| chr4.3 | CDS | 592756 | 592917 | 592756 | ID=cds.MS.gene95892.t1;Parent=MS.gene95892.t1 |
| chr4.3 | exon | 594701 | 594887 | 594701 | ID=MS.gene95892.t1.exon3;Parent=MS.gene95892.t1 |
| chr4.3 | CDS | 594701 | 594887 | 594701 | ID=cds.MS.gene95892.t1;Parent=MS.gene95892.t1 |
| chr4.3 | exon | 596032 | 596454 | 596032 | ID=MS.gene95892.t1.exon4;Parent=MS.gene95892.t1 |
| chr4.3 | CDS | 596032 | 596454 | 596032 | ID=cds.MS.gene95892.t1;Parent=MS.gene95892.t1 |
| chr4.3 | exon | 597241 | 597648 | 597241 | ID=MS.gene95892.t1.exon5;Parent=MS.gene95892.t1 |
| chr4.3 | CDS | 597241 | 597648 | 597241 | ID=cds.MS.gene95892.t1;Parent=MS.gene95892.t1 |
| chr4.3 | exon | 597920 | 598177 | 597920 | ID=MS.gene95892.t1.exon6;Parent=MS.gene95892.t1 |
| chr4.3 | CDS | 597920 | 598177 | 597920 | ID=cds.MS.gene95892.t1;Parent=MS.gene95892.t1 |
| Gene Sequence |
| Protein sequence |
