AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene049696

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049696.t1 MTR_3g064580 97.474 673 16 1 1 673 1 672 0.0 1377
MS.gene049696.t1 MTR_5g076850 63.704 675 206 20 1 668 1 643 0.0 811
MS.gene049696.t1 MTR_2g064090 51.582 316 127 8 1 300 1 306 1.40e-91 288
MS.gene049696.t1 MTR_6g477900 75.309 162 39 1 1 162 1 161 5.56e-89 278
MS.gene049696.t1 MTR_5g014300 64.634 164 47 2 1 157 1 160 2.84e-70 232
MS.gene049696.t1 MTR_4g098630 53.368 193 75 4 1 180 1 191 6.28e-64 214
MS.gene049696.t1 MTR_8g076110 47.619 189 89 3 1 188 1 180 4.21e-59 201
MS.gene049696.t1 MTR_1g097300 60.494 162 62 2 8 169 21 180 8.19e-59 208
MS.gene049696.t1 MTR_3g093040 57.962 157 65 1 1 157 103 258 1.61e-58 200
MS.gene049696.t1 MTR_3g093050 62.092 153 57 1 5 157 21 172 2.34e-58 207
MS.gene049696.t1 MTR_5g069030 62.500 152 56 1 6 157 25 175 2.39e-58 208
MS.gene049696.t1 MTR_3g093050 62.092 153 57 1 5 157 21 172 3.56e-58 207
MS.gene049696.t1 MTR_0036s0150 60.123 163 61 3 8 169 7 166 2.10e-57 203
MS.gene049696.t1 MTR_4g036030 54.902 153 65 2 6 157 7 156 2.44e-57 198
MS.gene049696.t1 MTR_2g079990 56.604 159 66 2 1 159 11 166 5.91e-57 197
MS.gene049696.t1 MTR_3g096140 55.215 163 69 3 8 169 9 168 2.02e-56 193
MS.gene049696.t1 MTR_1g090723 58.896 163 63 3 8 169 10 169 2.22e-56 202
MS.gene049696.t1 MTR_4g101680 51.829 164 73 3 6 167 7 166 2.96e-56 196
MS.gene049696.t1 MTR_1g090723 58.896 163 63 3 8 169 10 169 3.22e-56 202
MS.gene049696.t1 MTR_1g090720 58.721 172 65 2 4 170 40 210 3.84e-56 198
MS.gene049696.t1 MTR_1g096430 56.129 155 64 2 6 159 7 158 4.18e-56 194
MS.gene049696.t1 MTR_3g088110 53.409 176 77 3 4 177 5 177 1.05e-55 191
MS.gene049696.t1 MTR_5g021710 53.205 156 69 2 6 160 8 160 1.35e-55 193
MS.gene049696.t1 MTR_3g096140 55.215 163 69 3 8 169 9 168 1.89e-55 193
MS.gene049696.t1 MTR_2g062730 53.846 156 67 3 4 157 8 160 2.21e-55 192
MS.gene049696.t1 MTR_8g059170 56.875 160 66 2 1 159 9 166 2.58e-55 192
MS.gene049696.t1 MTR_4g035590 48.128 187 88 5 5 188 7 187 3.88e-55 192
MS.gene049696.t1 MTR_7g005280 57.988 169 60 5 4 170 13 172 8.05e-55 188
MS.gene049696.t1 MTR_1g090723 58.537 164 63 4 8 169 10 170 1.47e-54 197
MS.gene049696.t1 MTR_5g012080 54.839 155 64 4 6 157 7 158 1.66e-54 190
MS.gene049696.t1 MTR_6g084430 56.442 163 64 3 6 168 5 160 1.74e-54 189
MS.gene049696.t1 MTR_2g080010 54.545 165 61 3 6 158 15 177 6.52e-54 189
MS.gene049696.t1 MTR_8g063550 52.071 169 79 2 1 169 1 167 7.13e-54 188
MS.gene049696.t1 MTR_8g063550 52.071 169 79 2 1 169 1 167 1.12e-53 191
MS.gene049696.t1 MTR_8g063550 52.071 169 79 2 1 169 1 167 1.44e-53 191
MS.gene049696.t1 MTR_8g094580 46.296 216 93 6 4 199 5 217 1.82e-53 185
MS.gene049696.t1 MTR_4g108760 54.430 158 69 2 4 160 15 170 1.98e-53 187
MS.gene049696.t1 MTR_6g012670 55.128 156 67 2 6 160 20 173 2.98e-53 186
MS.gene049696.t1 MTR_4g081870 52.830 159 70 3 2 157 5 161 3.49e-53 184
MS.gene049696.t1 MTR_5g041940 52.500 160 71 3 4 160 1 158 7.90e-53 183
MS.gene049696.t1 MTR_1g008740 56.051 157 62 4 5 158 12 164 1.61e-52 185
MS.gene049696.t1 MTR_8g024480 49.693 163 69 3 6 157 15 175 2.11e-52 187
MS.gene049696.t1 MTR_1g008740 56.051 157 62 4 5 158 26 178 2.51e-52 185
MS.gene049696.t1 MTR_2g079990 47.849 186 68 2 1 159 11 194 3.00e-52 185
MS.gene049696.t1 MTR_3g435150 56.494 154 64 2 6 158 16 167 3.93e-52 182
MS.gene049696.t1 MTR_7g085220 51.765 170 62 4 4 158 6 170 5.23e-52 183
MS.gene049696.t1 MTR_6g032770 50.898 167 75 4 3 165 15 178 6.20e-52 184
MS.gene049696.t1 MTR_2g078700 57.692 156 61 4 6 158 23 176 1.20e-51 183
MS.gene049696.t1 MTR_3g109340 55.769 156 63 3 5 158 21 172 1.44e-51 182
MS.gene049696.t1 MTR_3g096920 54.375 160 68 3 4 161 5 161 3.09e-51 179
MS.gene049696.t1 MTR_3g109340 55.128 156 63 3 5 158 21 171 5.82e-51 181
MS.gene049696.t1 MTR_2157s0010 51.829 164 66 4 6 158 8 169 8.72e-51 177
MS.gene049696.t1 MTR_6g011860 49.398 166 73 3 6 162 15 178 9.84e-51 181
MS.gene049696.t1 MTR_8g093580 49.112 169 84 2 1 169 1 167 3.07e-50 182
MS.gene049696.t1 MTR_2g064470 51.163 172 77 3 1 169 6 173 3.82e-50 177
MS.gene049696.t1 MTR_2g086880 41.860 258 115 7 1 258 13 235 5.14e-50 182
MS.gene049696.t1 MTR_7g085260 51.190 168 74 4 4 165 15 180 5.26e-50 179
MS.gene049696.t1 MTR_4g134460 52.597 154 67 3 8 160 56 204 7.52e-50 180
MS.gene049696.t1 MTR_1g069805 43.868 212 85 5 4 188 8 212 8.40e-50 175
MS.gene049696.t1 MTR_2g086880 41.860 258 115 7 1 258 13 235 1.17e-49 183
MS.gene049696.t1 MTR_4g089135 48.168 191 70 5 6 169 15 203 1.93e-49 176
MS.gene049696.t1 MTR_3g070030 45.699 186 90 3 4 187 17 193 4.79e-49 176
MS.gene049696.t1 MTR_8g467490 40.086 232 114 7 8 225 16 236 7.40e-49 176
MS.gene049696.t1 MTR_7g097090 54.545 154 61 3 4 155 8 154 1.13e-48 172
MS.gene049696.t1 MTR_3g096920 54.967 151 62 3 4 154 5 149 1.50e-48 173
MS.gene049696.t1 MTR_5g040420 40.075 267 122 11 8 254 16 264 2.64e-48 174
MS.gene049696.t1 MTR_7g100990 49.686 159 73 5 4 157 9 165 5.23e-48 172
MS.gene049696.t1 MTR_2g093810 51.266 158 70 4 5 157 13 168 7.38e-48 171
MS.gene049696.t1 MTR_3g096140 52.349 149 67 3 22 169 2 147 3.71e-46 167
MS.gene049696.t1 MTR_3g116070 59.542 131 48 4 6 133 23 151 8.48e-45 164
MS.gene049696.t1 MTR_7g011130 54.962 131 57 1 4 134 17 145 2.10e-44 162
MS.gene049696.t1 MTR_2g068880 47.879 165 71 4 8 158 24 187 5.90e-44 160
MS.gene049696.t1 MTR_2g068920 45.402 174 80 3 8 167 23 195 1.84e-43 158
MS.gene049696.t1 MTR_4g075980 46.341 164 75 4 8 168 17 170 7.16e-43 157
MS.gene049696.t1 MTR_5g090970 48.447 161 70 4 8 157 20 178 1.48e-42 156
MS.gene049696.t1 MTR_5g090970 47.205 161 71 4 8 157 20 177 7.98e-42 154
MS.gene049696.t1 MTR_7g011120 53.435 131 59 1 4 134 6 134 2.22e-41 153
MS.gene049696.t1 MTR_3g070040 44.970 169 85 3 4 169 6 169 3.76e-41 153
MS.gene049696.t1 MTR_8g023840 43.350 203 97 6 6 202 11 201 6.28e-41 154
MS.gene049696.t1 MTR_8g099750 49.677 155 68 3 6 154 14 164 1.04e-40 149
MS.gene049696.t1 MTR_8g023860 45.109 184 91 4 6 186 12 188 2.80e-38 147
MS.gene049696.t1 MTR_3g098810 47.826 161 71 4 6 157 14 170 1.15e-37 140
MS.gene049696.t1 MTR_3g098810 52.273 132 55 2 6 133 14 141 4.14e-37 137
MS.gene049696.t1 MTR_4g052620 34.766 256 133 9 6 236 5 251 2.22e-36 137
MS.gene049696.t1 MTR_8g023900 45.625 160 77 5 5 160 11 164 1.98e-35 140
MS.gene049696.t1 MTR_8g023900 42.424 165 79 6 1 157 184 340 1.64e-32 131
MS.gene049696.t1 MTR_8g023930 39.444 180 99 4 6 182 24 196 1.37e-34 137
MS.gene049696.t1 MTR_2g086690 41.772 158 81 5 7 155 5 160 3.75e-34 131
MS.gene049696.t1 MTR_7g105170 35.961 203 110 8 6 190 4 204 4.38e-34 131
MS.gene049696.t1 MTR_8g094580 43.312 157 68 5 63 199 8 163 1.49e-32 125
MS.gene049696.t1 MTR_4g094302 43.846 130 61 3 6 133 11 130 2.54e-29 114
MS.gene049696.t1 MTR_4g094302 43.846 130 61 3 6 133 11 130 3.12e-29 115
MS.gene049696.t1 MTR_8g023880 39.766 171 75 7 4 157 5 164 5.41e-27 111
MS.gene049696.t1 MTR_7g070140 59.259 81 31 2 56 134 12 92 2.77e-25 102
MS.gene049696.t1 MTR_8g093790 37.662 154 73 6 4 157 8 138 1.80e-20 90.1
MS.gene049696.t1 MTR_3g096400 30.556 180 106 5 4 172 5 176 3.42e-19 87.0
MS.gene049696.t1 MTR_7g083330 34.884 129 80 3 4 131 16 141 2.11e-18 84.3
MS.gene049696.t1 MTR_7g083360 32.692 156 97 5 2 156 6 154 7.08e-17 78.6
MS.gene049696.t1 MTR_7g083370 32.061 131 85 3 6 135 10 137 1.57e-15 74.3
MS.gene049696.t1 MTR_7g070150 57.377 61 21 3 98 157 1 57 1.80e-15 72.8
MS.gene049696.t1 MTR_1g087190 58.696 46 18 1 8 52 7 52 3.15e-13 65.1
MS.gene049696.t1 MTR_7g116460 31.250 160 91 9 12 161 11 161 4.55e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049696.t1 AT1G65910 43.732 686 306 22 1 664 1 628 5.32e-164 485
MS.gene049696.t1 AT5G17260 40.348 575 205 19 1 563 1 449 3.28e-120 367
MS.gene049696.t1 AT3G03200 49.573 351 143 8 1 343 1 325 5.86e-105 328
MS.gene049696.t1 AT3G17730 76.543 162 37 1 1 162 1 161 3.91e-91 283
MS.gene049696.t1 AT1G54330 72.892 166 41 1 1 166 1 162 1.62e-81 260
MS.gene049696.t1 AT4G17980 64.375 160 54 2 1 157 1 160 3.63e-68 224
MS.gene049696.t1 AT4G17980 64.375 160 54 2 1 157 1 160 3.93e-68 225
MS.gene049696.t1 AT5G46590 59.006 161 65 1 1 160 1 161 9.37e-67 221
MS.gene049696.t1 AT5G04410 63.473 167 57 3 4 169 7 170 1.36e-63 221
MS.gene049696.t1 AT3G10500 62.651 166 60 2 4 169 7 170 2.08e-63 220
MS.gene049696.t1 AT1G32510 54.839 186 70 2 1 172 1 186 2.37e-63 212
MS.gene049696.t1 AT5G46590 62.500 144 49 2 1 143 1 140 3.20e-62 209
MS.gene049696.t1 AT3G10480 59.412 170 68 1 1 170 22 190 3.52e-62 214
MS.gene049696.t1 AT1G33060 60.784 153 59 1 5 157 23 174 1.44e-61 217
MS.gene049696.t1 AT1G33060 60.784 153 59 1 5 157 23 174 1.62e-61 217
MS.gene049696.t1 AT3G10490 59.639 166 66 1 5 170 26 190 3.22e-61 204
MS.gene049696.t1 AT1G34190 60.000 165 58 3 8 169 18 177 6.58e-61 213
MS.gene049696.t1 AT4G35580 61.438 153 58 1 5 157 8 159 1.19e-60 212
MS.gene049696.t1 AT4G35580 61.438 153 58 1 5 157 8 159 1.29e-60 212
MS.gene049696.t1 AT4G35580 61.438 153 58 1 5 157 8 159 1.35e-60 212
MS.gene049696.t1 AT3G10480 58.824 170 68 2 1 170 22 189 3.06e-60 209
MS.gene049696.t1 AT3G10490 59.281 167 67 1 4 170 25 190 1.89e-59 207
MS.gene049696.t1 AT4G27410 58.491 159 63 2 1 159 9 164 5.19e-59 201
MS.gene049696.t1 AT1G34180 57.576 165 62 3 8 169 18 177 2.62e-58 203
MS.gene049696.t1 AT1G33280 54.118 170 71 4 6 174 8 171 3.12e-58 199
MS.gene049696.t1 AT4G10350 50.000 190 89 5 6 192 9 195 7.81e-58 199
MS.gene049696.t1 AT1G34180 57.576 165 62 3 8 169 18 177 2.04e-57 204
MS.gene049696.t1 AT3G15500 59.119 159 62 2 1 159 9 164 2.15e-57 197
MS.gene049696.t1 AT3G18400 56.774 155 63 2 6 160 5 155 2.95e-57 197
MS.gene049696.t1 AT5G24590 54.938 162 71 2 1 161 8 168 4.91e-57 200
MS.gene049696.t1 AT3G10480 50.246 203 67 2 1 170 22 223 7.24e-57 202
MS.gene049696.t1 AT5G66300 54.321 162 71 2 4 164 10 169 9.06e-57 194
MS.gene049696.t1 AT1G12260 50.307 163 77 2 6 167 7 166 1.19e-56 196
MS.gene049696.t1 AT1G52890 52.514 179 82 2 1 179 9 184 1.33e-56 195
MS.gene049696.t1 AT2G18060 50.588 170 80 2 1 169 4 170 2.13e-56 196
MS.gene049696.t1 AT2G18060 50.588 170 80 2 1 169 4 170 2.13e-56 196
MS.gene049696.t1 AT1G71930 43.231 229 107 4 5 218 8 228 2.49e-56 194
MS.gene049696.t1 AT1G71930 43.231 229 107 4 5 218 8 228 2.49e-56 194
MS.gene049696.t1 AT1G12260 50.307 163 77 2 6 167 7 166 2.74e-56 196
MS.gene049696.t1 AT4G27410 53.409 176 62 3 1 159 9 181 8.10e-56 193
MS.gene049696.t1 AT2G24430 58.974 156 58 3 5 158 15 166 9.11e-56 192
MS.gene049696.t1 AT2G24430 58.974 156 58 3 5 158 15 166 9.11e-56 192
MS.gene049696.t1 AT1G62700 49.419 172 83 2 6 176 7 175 1.21e-55 195
MS.gene049696.t1 AT1G62700 49.419 172 83 2 6 176 7 175 1.21e-55 195
MS.gene049696.t1 AT5G39610 43.644 236 125 5 4 238 18 246 3.20e-55 190
MS.gene049696.t1 AT1G34180 53.672 177 62 4 8 169 18 189 3.34e-55 195
MS.gene049696.t1 AT4G36160 52.903 155 69 2 4 157 8 159 3.72e-55 193
MS.gene049696.t1 AT4G36160 52.903 155 69 2 4 157 8 159 3.72e-55 193
MS.gene049696.t1 AT4G36160 52.903 155 69 2 4 157 12 163 3.84e-55 193
MS.gene049696.t1 AT5G64060 51.479 169 80 2 1 169 1 167 2.27e-54 190
MS.gene049696.t1 AT1G34180 53.672 177 62 4 8 169 18 189 2.32e-54 196
MS.gene049696.t1 AT3G49530 53.797 158 71 2 5 161 12 168 3.40e-54 191
MS.gene049696.t1 AT3G49530 53.797 158 71 2 5 161 12 168 6.76e-54 192
MS.gene049696.t1 AT3G04070 52.000 175 69 5 5 166 9 181 8.87e-54 188
MS.gene049696.t1 AT5G62380 53.548 155 64 3 6 157 7 156 1.43e-53 188
MS.gene049696.t1 AT5G62380 53.548 155 64 3 6 157 7 156 1.43e-53 188
MS.gene049696.t1 AT1G69490 55.769 156 64 4 5 157 8 161 2.22e-53 184
MS.gene049696.t1 AT5G18270 55.758 165 66 4 4 163 19 181 4.11e-53 186
MS.gene049696.t1 AT5G07680 55.414 157 67 2 4 159 1 155 6.71e-53 185
MS.gene049696.t1 AT1G79580 53.846 156 66 3 4 157 15 166 7.33e-53 186
MS.gene049696.t1 AT1G79580 53.846 156 66 3 4 157 15 166 7.33e-53 186
MS.gene049696.t1 AT1G79580 53.846 156 66 3 4 157 15 166 7.33e-53 186
MS.gene049696.t1 AT1G79580 53.846 156 66 3 4 157 15 166 7.33e-53 186
MS.gene049696.t1 AT1G79580 53.846 156 66 3 4 157 15 166 7.33e-53 186
MS.gene049696.t1 AT5G07680 55.414 157 67 2 4 159 15 169 7.92e-53 185
MS.gene049696.t1 AT1G32770 49.390 164 69 3 6 157 16 177 8.67e-53 186
MS.gene049696.t1 AT5G61430 55.128 156 67 2 4 158 14 167 1.42e-52 185
MS.gene049696.t1 AT5G18270 55.152 165 67 4 4 163 19 181 1.47e-52 184
MS.gene049696.t1 AT3G29035 56.688 157 65 2 4 159 22 176 1.74e-52 184
MS.gene049696.t1 AT5G53950 56.875 160 64 4 6 162 17 174 2.66e-52 185
MS.gene049696.t1 AT3G12977 47.253 182 88 2 1 182 13 186 2.79e-52 182
MS.gene049696.t1 AT1G01720 56.688 157 62 4 4 157 5 158 4.11e-52 182
MS.gene049696.t1 AT2G02450 50.276 181 78 6 8 185 53 224 5.93e-52 184
MS.gene049696.t1 AT3G15170 54.375 160 68 4 6 162 20 177 7.07e-52 182
MS.gene049696.t1 AT5G09330 53.254 169 77 2 1 169 1 167 7.59e-52 187
MS.gene049696.t1 AT5G09330 53.254 169 77 2 1 169 1 167 7.59e-52 187
MS.gene049696.t1 AT5G09330 53.254 169 77 2 1 169 1 167 7.59e-52 187
MS.gene049696.t1 AT5G09330 53.254 169 77 2 1 169 1 167 7.59e-52 187
MS.gene049696.t1 AT5G09330 53.254 169 77 2 1 169 1 167 7.59e-52 187
MS.gene049696.t1 AT2G02450 49.444 180 81 5 8 185 53 224 7.64e-52 185
MS.gene049696.t1 AT3G61910 47.399 173 70 4 6 161 11 179 8.44e-52 182
MS.gene049696.t1 AT3G04070 47.644 191 69 5 5 166 9 197 2.63e-51 182
MS.gene049696.t1 AT1G77450 54.321 162 69 3 2 161 6 164 3.80e-51 178
MS.gene049696.t1 AT5G08790 49.468 188 83 5 4 187 5 184 4.45e-51 179
MS.gene049696.t1 AT2G46770 49.102 167 68 3 6 157 16 180 7.77e-51 181
MS.gene049696.t1 AT2G33480 53.896 154 65 2 4 157 13 160 8.22e-51 177
MS.gene049696.t1 AT2G33480 53.247 154 64 2 4 157 13 158 4.18e-50 176
MS.gene049696.t1 AT1G56010 54.268 164 66 5 1 159 14 173 6.22e-50 177
MS.gene049696.t1 AT3G04060 55.769 156 65 3 4 157 18 171 2.06e-49 176
MS.gene049696.t1 AT1G76420 53.846 156 66 3 5 158 21 172 2.16e-49 176
MS.gene049696.t1 AT5G39820 42.411 224 97 6 8 201 22 243 2.41e-49 176
MS.gene049696.t1 AT5G13180 55.769 156 60 3 4 157 12 160 2.42e-49 173
MS.gene049696.t1 AT5G63790 47.396 192 87 5 2 182 46 234 3.23e-49 175
MS.gene049696.t1 AT5G63790 47.396 192 87 5 2 182 56 244 3.89e-49 175
MS.gene049696.t1 AT1G26870 32.041 387 221 9 6 378 16 374 4.12e-49 177
MS.gene049696.t1 AT1G61110 49.419 172 73 3 6 165 16 185 4.60e-49 175
MS.gene049696.t1 AT3G15510 49.724 181 64 4 10 178 21 186 9.33e-49 175
MS.gene049696.t1 AT1G32870 57.576 165 66 3 6 169 10 171 1.28e-48 179
MS.gene049696.t1 AT1G32870 57.576 165 66 3 6 169 10 171 1.44e-48 179
MS.gene049696.t1 AT1G32870 57.576 165 66 3 6 169 46 207 2.14e-48 179
MS.gene049696.t1 AT3G44290 51.235 162 63 4 8 163 16 167 2.24e-48 170
MS.gene049696.t1 AT5G22290 50.000 154 69 2 1 154 16 161 3.82e-48 172
MS.gene049696.t1 AT3G44290 51.235 162 63 4 8 163 16 167 9.61e-48 171
MS.gene049696.t1 AT2G27300 50.633 158 69 2 1 158 9 157 2.66e-47 170
MS.gene049696.t1 AT2G17040 51.220 164 67 5 8 168 8 161 2.71e-47 168
MS.gene049696.t1 AT2G43000 52.632 152 70 1 8 159 20 169 3.07e-47 168
MS.gene049696.t1 AT4G28530 52.047 171 55 7 6 157 10 172 8.95e-46 166
MS.gene049696.t1 AT1G52880 51.807 166 67 5 10 164 21 184 1.52e-43 159
MS.gene049696.t1 AT5G04395 48.630 146 61 2 2 133 24 169 7.67e-39 142
MS.gene049696.t1 AT3G12910 44.910 167 73 5 8 158 23 186 1.62e-36 139
MS.gene049696.t1 AT4G10350 47.727 132 64 4 63 192 20 148 3.82e-35 135
MS.gene049696.t1 AT5G61430 58.763 97 39 1 63 158 8 104 4.45e-33 129
MS.gene049696.t1 AT3G12977 47.500 120 57 1 63 182 20 133 3.21e-32 125
MS.gene049696.t1 AT4G01520 46.212 132 66 3 7 133 5 136 1.01e-30 122
MS.gene049696.t1 AT3G44350 39.610 154 89 3 9 158 8 161 2.38e-30 120
MS.gene049696.t1 AT5G22380 40.523 153 85 4 9 155 8 160 2.61e-30 119
MS.gene049696.t1 AT1G56010 53.704 108 44 3 55 159 2 106 3.98e-30 120
MS.gene049696.t1 AT4G01540 45.385 130 66 3 9 133 7 136 6.46e-29 120
MS.gene049696.t1 AT4G01550 36.408 206 109 6 9 202 7 202 7.58e-29 120
MS.gene049696.t1 AT4G01540 45.385 130 66 3 9 133 7 136 7.95e-29 119
MS.gene049696.t1 AT4G01540 45.385 130 66 3 9 133 7 136 9.47e-29 119
MS.gene049696.t1 AT2G33480 54.737 95 42 1 63 157 10 103 1.09e-28 114
MS.gene049696.t1 AT4G01540 45.385 130 66 3 9 133 7 136 1.24e-28 120
MS.gene049696.t1 AT5G64530 41.791 134 62 4 4 135 1 120 3.68e-28 111
MS.gene049696.t1 AT4G28530 51.695 118 36 4 6 105 10 124 4.35e-28 115
MS.gene049696.t1 AT3G04420 37.821 156 89 3 7 160 4 153 2.20e-27 113
MS.gene049696.t1 AT3G44350 41.985 131 72 3 9 135 8 138 4.54e-27 108
MS.gene049696.t1 AT5G64530 42.424 132 60 4 4 133 1 118 5.30e-27 108
MS.gene049696.t1 AT3G04420 37.821 156 89 3 7 160 4 153 1.01e-26 112
MS.gene049696.t1 AT1G02230 43.846 130 65 4 7 131 4 130 5.32e-26 110
MS.gene049696.t1 AT3G10490 56.667 90 38 1 81 170 2 90 1.79e-25 108
MS.gene049696.t1 AT3G10490 56.667 90 38 1 81 170 2 90 1.79e-25 108
MS.gene049696.t1 AT1G02250 37.662 154 81 6 7 154 4 148 3.28e-23 102
MS.gene049696.t1 AT1G02220 39.370 127 72 2 7 131 4 127 2.72e-22 100
MS.gene049696.t1 AT1G01010 36.943 157 79 5 9 154 6 153 2.42e-21 97.8
MS.gene049696.t1 AT2G43000 48.889 90 46 0 70 159 2 91 5.30e-21 92.0
MS.gene049696.t1 AT3G56530 33.117 154 97 3 4 155 50 199 2.48e-19 90.1
MS.gene049696.t1 AT3G55210 34.356 163 88 4 6 155 11 167 3.20e-19 89.0
MS.gene049696.t1 AT2G18060 44.048 84 44 1 86 169 2 82 5.01e-19 88.2
MS.gene049696.t1 AT5G14000 34.091 132 81 2 4 133 13 140 4.24e-18 82.4
MS.gene049696.t1 AT5G50820 35.821 134 72 4 4 133 15 138 5.97e-18 83.2
MS.gene049696.t1 AT5G14000 34.091 132 81 2 4 133 13 140 3.89e-17 80.9
MS.gene049696.t1 AT5G22290 30.332 211 97 10 87 283 2 176 6.56e-15 75.5
MS.gene049696.t1 AT3G04430 33.083 133 75 5 12 132 6 136 2.80e-13 69.7
MS.gene049696.t1 AT5G56620 26.667 285 141 13 4 241 41 304 3.92e-11 65.9
MS.gene049696.t1 AT5G56620 26.667 285 141 13 4 241 41 304 3.94e-11 65.9
MS.gene049696.t1 AT5G56620 26.667 285 141 13 4 241 41 304 4.23e-11 65.9

Find 152 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCATCATTTCCCAATTA+TGG 0.131333 3.3:+58232825 MS.gene049696:CDS
AACACAAGATCAATTGAAAT+TGG 0.178255 3.3:+58233772 MS.gene049696:CDS
CTCTCTCTTAAGGAAGTTTA+AGG 0.184664 3.3:+58234820 MS.gene049696:CDS
TTTCATTGCCTCCTGGATTT+AGG 0.185491 3.3:+58231079 MS.gene049696:CDS
ATTAGGTGTGGATCCATAAT+TGG 0.210005 3.3:-58232838 None:intergenic
GGAATGAGCAAGAGAAAATT+TGG 0.218277 3.3:+58235026 MS.gene049696:CDS
TTGACTTCTTTGTTGATATT+TGG 0.231733 3.3:-58234506 None:intergenic
AGAGAGTATCCTTGATTCTT+TGG 0.242721 3.3:-58234803 None:intergenic
GCACTTGCTATTATCTTTGA+TGG 0.248482 3.3:-58234869 None:intergenic
CAATCCTTCCGCCGGTTTGC+AGG 0.250082 3.3:+58232290 MS.gene049696:CDS
TACCTCAAAAGAAAGATTAA+TGG 0.252239 3.3:+58231135 MS.gene049696:CDS
ACATATTGCTCCCCAACTTT+TGG 0.262023 3.3:-58232564 None:intergenic
GAAGGAAGAGATGAAGTTAT+AGG 0.266178 3.3:+58232654 MS.gene049696:CDS
TCACAAGGGATGATGGAATT+TGG 0.272379 3.3:+58232763 MS.gene049696:CDS
TCATCTATAAAATTCTCATT+AGG 0.282892 3.3:-58234578 None:intergenic
TATTAGTCCCATTCGTGTTT+TGG 0.290824 3.3:-58232716 None:intergenic
AAGCTTGAAATTTCCTCAAT+TGG 0.293235 3.3:-58234315 None:intergenic
ATTTCAATTGATCTTGTGTT+TGG 0.306451 3.3:-58233769 None:intergenic
GAGCAACAAAATCTGGATAT+TGG 0.309075 3.3:+58232118 MS.gene049696:CDS
CTATTGGTTCTTGACCCATT+TGG 0.316548 3.3:-58232096 None:intergenic
CTGTACTCTTCTTGAATATA+CGG 0.326332 3.3:-58232533 None:intergenic
ACCAATAGAGCAACAAAATC+TGG 0.328796 3.3:+58232111 MS.gene049696:CDS
CAAGAGAAAATTTGGTTTGT+TGG 0.331645 3.3:+58235034 MS.gene049696:CDS
AGTTCAACTCAATCCAATTC+TGG 0.331873 3.3:+58234739 MS.gene049696:CDS
ATTGCTACCGGGAAAAGATT+TGG 0.335984 3.3:+58232038 MS.gene049696:CDS
AACATTGATAATTTCTCAAT+GGG 0.339152 3.3:+58234536 MS.gene049696:CDS
TTGGGAAATGATGAAGATAT+TGG 0.344729 3.3:-58232819 None:intergenic
TTGTTTGTGAAGGTGTTATT+TGG 0.349202 3.3:-58234712 None:intergenic
ACCTTGGATGGAGGGTAATT+AGG 0.353293 3.3:-58232855 None:intergenic
ACACAAGATCAATTGAAATT+GGG 0.359406 3.3:+58233773 MS.gene049696:CDS
TTCAATAACAAACTATCATA+TGG 0.377945 3.3:-58235147 None:intergenic
AAAGAGCCAAAGATATAGTT+AGG 0.384447 3.3:-58235108 None:intergenic
AAGGAAGAGATGAAGTTATA+GGG 0.388525 3.3:+58232655 MS.gene049696:CDS
ATCAAGGATACTCTCTCTTA+AGG 0.390216 3.3:+58234810 MS.gene049696:CDS
CATCTATAAAATTCTCATTA+GGG 0.392715 3.3:-58234577 None:intergenic
GCACCTGTTTCATTGCCTCC+TGG 0.396749 3.3:+58231072 MS.gene049696:CDS
CTCTTCCTCTATAGTAAACT+AGG 0.397058 3.3:-58232203 None:intergenic
CAGTGATTGCTCCAAAAGTT+GGG 0.399593 3.3:+58232553 MS.gene049696:CDS
TTTGGATATTTCCTATCTCT+AGG 0.400001 3.3:-58232078 None:intergenic
ATAGCATGAAGAAAATCATT+TGG 0.409581 3.3:+58235005 MS.gene049696:CDS
AAATGAAACAGATATCTTGC+AGG 0.410733 3.3:+58233555 MS.gene049696:CDS
TCTGGATATTGGAAGGCAAC+TGG 0.416015 3.3:+58232129 MS.gene049696:CDS
CCATGGATCTCGTACGGGTT+GGG 0.416544 3.3:+58232230 MS.gene049696:CDS
CACTTGTAGAGATCAACTTC+AGG 0.419704 3.3:-58231183 None:intergenic
TTCTTTGCCTCCCTTGGAGG+TGG 0.430580 3.3:+58233456 MS.gene049696:CDS
TCAAAAGGTTGTTCCAATTG+AGG 0.434799 3.3:+58234302 MS.gene049696:CDS
GTTGGTATCAAAAGTGGTAA+AGG 0.438741 3.3:+58235052 MS.gene049696:CDS
GGTGCTTTGTGTTTATTTGA+AGG 0.441954 3.3:+58234919 MS.gene049696:CDS
AATCCAGGAGGCAATGAAAC+AGG 0.443707 3.3:-58231075 None:intergenic
GGATCTTGATAATGAATTCA+AGG 0.446485 3.3:+58233795 MS.gene049696:CDS
ACAGTGATTGCTCCAAAAGT+TGG 0.449271 3.3:+58232552 MS.gene049696:CDS
TAACATTGATAATTTCTCAA+TGG 0.456609 3.3:+58234535 MS.gene049696:CDS
TCAAACTACTCACATGCATT+TGG 0.457307 3.3:+58233622 MS.gene049696:CDS
TTTCTTCATTCCAACGGCGC+GGG 0.461408 3.3:-58232178 None:intergenic
TTGGATATTTCCTATCTCTA+GGG 0.464224 3.3:-58232077 None:intergenic
AGAGATAGGAAATATCCAAA+TGG 0.470144 3.3:+58232081 MS.gene049696:CDS
GAGGTGGTCTTGAAGAAGAT+AGG 0.470778 3.3:+58235079 MS.gene049696:CDS
AAAACCCTAGTTTACTATAG+AGG 0.471807 3.3:+58232198 MS.gene049696:CDS
TGGTTTGTTGGTATCAAAAG+TGG 0.479971 3.3:+58235046 MS.gene049696:CDS
GTAGAGAATTTAAGATGGGT+TGG 0.480908 3.3:+58233829 MS.gene049696:CDS
TTAGGTGTGGATCCATAATT+GGG 0.482044 3.3:-58232837 None:intergenic
TGGGATGTGCTTGGATCCCA+TGG 0.482178 3.3:-58232696 None:intergenic
GCTCAAATTATTTGATGCCA+TGG 0.482678 3.3:+58232679 MS.gene049696:CDS
GGGAATGTCACAAGGGATGA+TGG 0.484358 3.3:+58232756 MS.gene049696:CDS
CAAAGTCAGAATATGTGAAA+AGG 0.488239 3.3:+58234963 MS.gene049696:CDS
GAGATAGGAAATATCCAAAT+GGG 0.489979 3.3:+58232082 MS.gene049696:CDS
CCCATGGATCTCGTACGGGT+TGG 0.491599 3.3:+58232229 MS.gene049696:CDS
CTTTGGCTCTTTGTACCATG+TGG 0.492296 3.3:+58235119 MS.gene049696:CDS
ATGCATGTGAGTAGTTTGAT+TGG 0.498766 3.3:-58233618 None:intergenic
GCACATCCCAAAACACGAAT+GGG 0.508585 3.3:+58232709 MS.gene049696:CDS
CATGGTTCAAACCTGCAAAC+CGG 0.510471 3.3:-58232301 None:intergenic
GATGGTAGAGAATTTAAGAT+GGG 0.510921 3.3:+58233825 MS.gene049696:CDS
TTCATTTCTAGTTCCACTCA+TGG 0.517202 3.3:-58233539 None:intergenic
CTCAAATTATTTGATGCCAT+GGG 0.519092 3.3:+58232680 MS.gene049696:CDS
GAAAGAATGTGTCTGCTACT+TGG 0.522837 3.3:-58234688 None:intergenic
AATGCTCAGACCCGCGCCGT+TGG 0.523934 3.3:+58232168 MS.gene049696:CDS
CAGAATTCATACCAACTTGA+GGG 0.526968 3.3:-58233486 None:intergenic
TATAGGGAAGTCATTGCTAC+CGG 0.528788 3.3:+58232026 MS.gene049696:intron
TTTGGCTCTTTGTACCATGT+GGG 0.528855 3.3:+58235120 MS.gene049696:CDS
CACAAGATCAATTGAAATTG+GGG 0.530743 3.3:+58233774 MS.gene049696:CDS
CACATTCTCTTTCATCAAGA+CGG 0.530791 3.3:-58232266 None:intergenic
AACAAAATCTGGATATTGGA+AGG 0.532279 3.3:+58232122 MS.gene049696:CDS
TAATGGCCGTAGGATTGAGT+TGG 0.534104 3.3:+58231152 MS.gene049696:CDS
AGCACCCCATGGATCTCGTA+CGG 0.534764 3.3:+58232224 MS.gene049696:CDS
AGGGAAGTCTTCCACCTCCA+AGG 0.535115 3.3:-58233467 None:intergenic
CCCAACCCGTACGAGATCCA+TGG 0.535480 3.3:-58232230 None:intergenic
GATATATTGATGACAAAGCA+TGG 0.540219 3.3:+58233740 MS.gene049696:CDS
ATGATTATACCAAAGAATCA+AGG 0.544952 3.3:+58234794 MS.gene049696:CDS
TTTCAAGCTTCAAAACAAAG+AGG 0.547034 3.3:+58234328 MS.gene049696:CDS
GGATGGTAGAGAATTTAAGA+TGG 0.547842 3.3:+58233824 MS.gene049696:CDS
AAGATGACACAATTAGTCTC+AGG 0.549948 3.3:+58233514 MS.gene049696:CDS
TGTGAACCATGGGACTTGCC+AGG 0.552299 3.3:+58231204 MS.gene049696:CDS
GAAACAAGTTCTTCATCGGT+GGG 0.553122 3.3:-58231108 None:intergenic
TTAACTAGTAGTACCTTGGA+TGG 0.553196 3.3:-58232867 None:intergenic
ACTTGTAGAGATCAACTTCA+GGG 0.553531 3.3:-58231182 None:intergenic
TACAAGCTATGAAGTTGTTG+AGG 0.553873 3.3:+58234625 MS.gene049696:CDS
AACTACTCACATGCATTTGG+TGG 0.556142 3.3:+58233625 MS.gene049696:CDS
ATAATGAATTCAAGGCTGAA+AGG 0.558323 3.3:+58233803 MS.gene049696:CDS
TGAATTCAAGGCTGAAAGGA+TGG 0.559338 3.3:+58233807 MS.gene049696:CDS
GTGAAAAGGAAATATAGCTA+TGG 0.559403 3.3:+58234977 MS.gene049696:CDS
TTTGTCATCAATATATCTCA+TGG 0.559559 3.3:-58233734 None:intergenic
GAATGTGACAATCCTTCCGC+CGG 0.560777 3.3:+58232282 MS.gene049696:CDS
AACAAAGAGGAAAGAGAATG+AGG 0.560950 3.3:+58234341 MS.gene049696:CDS
TGAACTTTGATTGTTTGTGA+AGG 0.561663 3.3:-58234722 None:intergenic
ATACTCTCAATAACAATGGT+GGG 0.561919 3.3:+58232736 MS.gene049696:CDS
ATAAGAAACAAGTTCTTCAT+CGG 0.563741 3.3:-58231112 None:intergenic
CCAACCCGTACGAGATCCAT+GGG 0.564145 3.3:-58232229 None:intergenic
GAAACAACAAAAGTTAGTCA+TGG 0.565828 3.3:+58234647 MS.gene049696:CDS
TATCATATGGTTAGCCCACA+TGG 0.566918 3.3:-58235134 None:intergenic
AGCACATCCCAAAACACGAA+TGG 0.568064 3.3:+58232708 MS.gene049696:CDS
AATACTCTCAATAACAATGG+TGG 0.568121 3.3:+58232735 MS.gene049696:CDS
CTAGTAGTACCTTGGATGGA+GGG 0.569534 3.3:-58232863 None:intergenic
AGCATTGAGTTGTACTCTGA+AGG 0.569905 3.3:+58232636 MS.gene049696:CDS
AGGAAAGAGAATGAGGTGCA+AGG 0.570770 3.3:+58234348 MS.gene049696:CDS
ACCTAATTACCCTCCATCCA+AGG 0.571030 3.3:+58232854 MS.gene049696:CDS
TGTTTATTTGAAGGAGCAAG+TGG 0.572910 3.3:+58234928 MS.gene049696:CDS
TACCGGGAAAAGATTTGGAA+TGG 0.574832 3.3:+58232043 MS.gene049696:CDS
AGTGTGCAAGGATGCAACAT+AGG 0.574842 3.3:+58233431 MS.gene049696:CDS
CAAGTTCTTCATCGGTGGGG+TGG 0.575721 3.3:-58231104 None:intergenic
AGAAACAAGTTCTTCATCGG+TGG 0.583246 3.3:-58231109 None:intergenic
GGGAAGTCTTCCACCTCCAA+GGG 0.583549 3.3:-58233466 None:intergenic
GCACCCCATGGATCTCGTAC+GGG 0.587091 3.3:+58232225 MS.gene049696:CDS
GTGGAAGACTTCCCTCAAGT+TGG 0.590146 3.3:+58233475 MS.gene049696:CDS
GTGGGGTGGAACCTAAATCC+AGG 0.594805 3.3:-58231090 None:intergenic
ATTATACCTGGCAAGTCCCA+TGG 0.597224 3.3:-58231210 None:intergenic
GTCAAGCAATGATTTAGAGA+AGG 0.598075 3.3:+58233855 MS.gene049696:CDS
TGATCTCCAACTCAATCCTA+CGG 0.598596 3.3:-58231158 None:intergenic
TCTCTACAAGTGTGAACCAT+GGG 0.599917 3.3:+58231194 MS.gene049696:CDS
TTAGTCTCAGGTTCCATGAG+TGG 0.599941 3.3:+58233526 MS.gene049696:CDS
TCAGAATTCATACCAACTTG+AGG 0.601198 3.3:-58233487 None:intergenic
TCTTCCTCTATAGTAAACTA+GGG 0.609079 3.3:-58232202 None:intergenic
ACTAGTAGTACCTTGGATGG+AGG 0.611789 3.3:-58232864 None:intergenic
ATATAGCACTAGAGTGTGCA+AGG 0.612154 3.3:+58233419 MS.gene049696:CDS
GGATGGAGGGTAATTAGGTG+TGG 0.613754 3.3:-58232850 None:intergenic
ACAATGGTGGGAATGTCACA+AGG 0.618508 3.3:+58232748 MS.gene049696:CDS
CAAACCTGCAAACCGGCGGA+AGG 0.621776 3.3:-58232294 None:intergenic
GGCAACTGGAAAAGATCGCA+AGG 0.625272 3.3:+58232143 MS.gene049696:CDS
ATATATTGATGACAAAGCAT+GGG 0.629524 3.3:+58233741 MS.gene049696:CDS
ACTAATACTCTCAATAACAA+TGG 0.632242 3.3:+58232732 MS.gene049696:CDS
AGTGATTGCTCCAAAAGTTG+GGG 0.636145 3.3:+58232554 MS.gene049696:CDS
ATAGGGAAGTCATTGCTACC+GGG 0.636793 3.3:+58232027 MS.gene049696:intron
ATCTCTACAAGTGTGAACCA+TGG 0.647017 3.3:+58231193 MS.gene049696:CDS
AAGTCTTCCACCTCCAAGGG+AGG 0.647983 3.3:-58233463 None:intergenic
ACATTGATAATTTCTCAATG+GGG 0.649885 3.3:+58234537 MS.gene049696:CDS
AAAGAAAGATTAATGGCCGT+AGG 0.654666 3.3:+58231142 MS.gene049696:CDS
AAACAAGTTCTTCATCGGTG+GGG 0.664766 3.3:-58231107 None:intergenic
TATAGAGGAAGAGCACCCCA+TGG 0.664795 3.3:+58232213 MS.gene049696:CDS
GGTTCAAACCTGCAAACCGG+CGG 0.672780 3.3:-58232298 None:intergenic
AATATGTTAATAATGTGACT+AGG 0.676521 3.3:+58232580 MS.gene049696:CDS
CAATGGTGGGAATGTCACAA+GGG 0.721046 3.3:+58232749 MS.gene049696:CDS
GGGTGGAACCTAAATCCAGG+AGG 0.759574 3.3:-58231087 None:intergenic
CAACCCGTACGAGATCCATG+GGG 0.805597 3.3:-58232228 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAATAAAAAATGATCAAT+AGG - chr3.3:58232457-58232476 None:intergenic 10.0%
!! TTAAAATCTTTATTATTGTA+CGG - chr3.3:58233294-58233313 None:intergenic 10.0%
!! ACAATTTCCTATAATTTATT+TGG + chr3.3:58233354-58233373 MS.gene049696:intron 15.0%
!! AGTATACTTAATAAAATTCT+AGG - chr3.3:58234032-58234051 None:intergenic 15.0%
!! GTATACTTAATAAAATTCTA+GGG - chr3.3:58234031-58234050 None:intergenic 15.0%
!! TAAGAAATCTTCTTTAATAT+GGG - chr3.3:58231900-58231919 None:intergenic 15.0%
!! TACAGATTTAAAAAACAATA+AGG - chr3.3:58233167-58233186 None:intergenic 15.0%
!! TCTTCTTATAAAATTATCTT+TGG - chr3.3:58231502-58231521 None:intergenic 15.0%
!! TTAAAAAAATAAGAATCTGA+AGG + chr3.3:58233025-58233044 MS.gene049696:intron 15.0%
!! TTAAGAAATCTTCTTTAATA+TGG - chr3.3:58231901-58231920 None:intergenic 15.0%
!!! AAAGATAATTTTATAAGAAG+AGG + chr3.3:58231501-58231520 MS.gene049696:intron 15.0%
!!! AACTTTTACCTTTTAAATTT+TGG + chr3.3:58233267-58233286 MS.gene049696:intron 15.0%
!!! AATAATTTTACAGAGTTTTA+TGG + chr3.3:58234272-58234291 MS.gene049696:intron 15.0%
!!! ATTTAATAAGAAATTTTGAG+AGG + chr3.3:58232393-58232412 MS.gene049696:intron 15.0%
!!! ATTTTTATGTGATTATTGTA+CGG + chr3.3:58232999-58233018 MS.gene049696:intron 15.0%
!!! CATTTTTAAAATCCATTTTT+GGG - chr3.3:58233994-58234013 None:intergenic 15.0%
!!! TGAAAATGATTTTACTTTTA+TGG + chr3.3:58233672-58233691 MS.gene049696:CDS 15.0%
!! AAACATGCAAATATATAACT+AGG + chr3.3:58231935-58231954 MS.gene049696:intron 20.0%
!! AAAGAATCTTAAAAAAGTGA+AGG + chr3.3:58231632-58231651 MS.gene049696:intron 20.0%
!! AATAAAAAATGATCAATAGG+TGG - chr3.3:58232454-58232473 None:intergenic 20.0%
!! AATATGTTAATAATGTGACT+AGG + chr3.3:58232580-58232599 MS.gene049696:CDS 20.0%
!! AATTCTTCTTAATTATTTGC+AGG + chr3.3:58233393-58233412 MS.gene049696:intron 20.0%
!! ACACCAAAACTTAATTAAAT+AGG + chr3.3:58232898-58232917 MS.gene049696:intron 20.0%
!! AGTAAGTTAAAAAAAATCCA+AGG - chr3.3:58234422-58234441 None:intergenic 20.0%
!! ATATTATAAAGTCCCAAAAA+TGG + chr3.3:58233979-58233998 MS.gene049696:intron 20.0%
!! ATGTCATATAATATTATACC+TGG - chr3.3:58231225-58231244 None:intergenic 20.0%
!! ATTACTAACTAGTATATGAT+TGG + chr3.3:58232335-58232354 MS.gene049696:intron 20.0%
!! ATTATGCATGAAATCATTAT+AGG + chr3.3:58232009-58232028 MS.gene049696:intron 20.0%
!! CATCTATAAAATTCTCATTA+GGG - chr3.3:58234580-58234599 None:intergenic 20.0%
!! TACTAGTTAGTAATAAAGTT+AGG - chr3.3:58232329-58232348 None:intergenic 20.0%
!! TATTCAATATTATAGGGTTT+AGG - chr3.3:58234215-58234234 None:intergenic 20.0%
!! TCATCTATAAAATTCTCATT+AGG - chr3.3:58234581-58234600 None:intergenic 20.0%
!! TTATGCATGAAATCATTATA+GGG + chr3.3:58232010-58232029 MS.gene049696:intron 20.0%
!! TTCATGACCAAATAAATTAT+AGG - chr3.3:58233364-58233383 None:intergenic 20.0%
!! TTGAAAAAAATTGTGATTTC+AGG + chr3.3:58232494-58232513 MS.gene049696:intron 20.0%
!!! AAAATCATTATTGGTTAATG+TGG + chr3.3:58231567-58231586 MS.gene049696:intron 20.0%
!!! AACATTGATAATTTCTCAAT+GGG + chr3.3:58234536-58234555 MS.gene049696:CDS 20.0%
!!! AATGAGAATTTTATAGATGA+TGG + chr3.3:58234581-58234600 MS.gene049696:CDS 20.0%
!!! AATGATTTTACTTTTATGGT+TGG + chr3.3:58233676-58233695 MS.gene049696:CDS 20.0%
!!! AATTTTCCTAACTATATCTT+TGG + chr3.3:58235102-58235121 MS.gene049696:CDS 20.0%
!!! AGTATATTTTTTTTCCACTT+TGG + chr3.3:58231733-58231752 MS.gene049696:intron 20.0%
!!! ATATATTTGCATGTTTTGAA+AGG - chr3.3:58231931-58231950 None:intergenic 20.0%
!!! GATTTTTTATTTTCCAGAAT+TGG - chr3.3:58234755-58234774 None:intergenic 20.0%
!!! GCATTTTTAAAATCCATTTT+TGG - chr3.3:58233995-58234014 None:intergenic 20.0%
!!! TAACATTGATAATTTCTCAA+TGG + chr3.3:58234535-58234554 MS.gene049696:CDS 20.0%
!!! TAATGTTATCTTTTGAGTAT+TGG + chr3.3:58234134-58234153 MS.gene049696:intron 20.0%
!!! TCTAGAATTATTTTACATTG+TGG - chr3.3:58233322-58233341 None:intergenic 20.0%
!!! TTAATAAAATTCTAGGGTAT+GGG - chr3.3:58234025-58234044 None:intergenic 20.0%
!!! TTTATTTTTGTAATTGACCT+TGG + chr3.3:58234402-58234421 MS.gene049696:intron 20.0%
! AAAGCTATTGTTAGTCAATT+TGG - chr3.3:58234460-58234479 None:intergenic 25.0%
! AACACAAGATCAATTGAAAT+TGG + chr3.3:58233772-58233791 MS.gene049696:CDS 25.0%
! ACACAAGATCAATTGAAATT+GGG + chr3.3:58233773-58233792 MS.gene049696:CDS 25.0%
! ACCAAAAATCTGTAACAAAT+TGG - chr3.3:58232924-58232943 None:intergenic 25.0%
! ACTAATACTCTCAATAACAA+TGG + chr3.3:58232732-58232751 MS.gene049696:CDS 25.0%
! ATAAGAAACAAGTTCTTCAT+CGG - chr3.3:58231115-58231134 None:intergenic 25.0%
! ATAGCATGAAGAAAATCATT+TGG + chr3.3:58235005-58235024 MS.gene049696:CDS 25.0%
! ATGATTATACCAAAGAATCA+AGG + chr3.3:58234794-58234813 MS.gene049696:CDS 25.0%
! ATTTCAATTGATCTTGTGTT+TGG - chr3.3:58233772-58233791 None:intergenic 25.0%
! CCAAATAAAAAGTTGTTTAG+AGG + chr3.3:58233067-58233086 MS.gene049696:intron 25.0%
! CTGATTGACAAAATCATTAT+TGG + chr3.3:58231558-58231577 MS.gene049696:intron 25.0%
! CTTTGGCATAAAATATTTAG+AGG + chr3.3:58231750-58231769 MS.gene049696:intron 25.0%
! TACCTCAAAAGAAAGATTAA+TGG + chr3.3:58231135-58231154 MS.gene049696:CDS 25.0%
! TAGTAATAAAGTTAGGTTCA+TGG - chr3.3:58232322-58232341 None:intergenic 25.0%
! TATTCTTATGAGTACTATCA+AGG + chr3.3:58234166-58234185 MS.gene049696:intron 25.0%
! TTGACTTCTTTGTTGATATT+TGG - chr3.3:58234509-58234528 None:intergenic 25.0%
! TTTGTCATCAATATATCTCA+TGG - chr3.3:58233737-58233756 None:intergenic 25.0%
!! ACATTGATAATTTCTCAATG+GGG + chr3.3:58234537-58234556 MS.gene049696:CDS 25.0%
!! ATATATTGATGACAAAGCAT+GGG + chr3.3:58233741-58233760 MS.gene049696:CDS 25.0%
!! CCTCTAAACAACTTTTTATT+TGG - chr3.3:58233070-58233089 None:intergenic 25.0%
!! CTAAATATTTTATGCCAAAG+TGG - chr3.3:58231750-58231769 None:intergenic 25.0%
!! TAGTATATGATTGGTTAATG+TGG + chr3.3:58232344-58232363 MS.gene049696:intron 25.0%
!! TGGCCTATTTAATTAAGTTT+TGG - chr3.3:58232904-58232923 None:intergenic 25.0%
!!! AGAATTATTTTACATTGTGG+AGG - chr3.3:58233319-58233338 None:intergenic 25.0%
!!! CTTAATAAAATTCTAGGGTA+TGG - chr3.3:58234026-58234045 None:intergenic 25.0%
!!! GTTCATATTTGCACTTTTTT+TGG + chr3.3:58234898-58234917 MS.gene049696:CDS 25.0%
AAAACAGTCAACAAAAGGAA+AGG + chr3.3:58231872-58231891 MS.gene049696:intron 30.0%
AAAACCCTAGTTTACTATAG+AGG + chr3.3:58232198-58232217 MS.gene049696:CDS 30.0%
AAAAGATAGCCTATATATGG+TGG - chr3.3:58233956-58233975 None:intergenic 30.0%
AAAGAGCCAAAGATATAGTT+AGG - chr3.3:58235111-58235130 None:intergenic 30.0%
AAATGAAACAGATATCTTGC+AGG + chr3.3:58233555-58233574 MS.gene049696:CDS 30.0%
AACAAAATCTGGATATTGGA+AGG + chr3.3:58232122-58232141 MS.gene049696:CDS 30.0%
AAGCTTGAAATTTCCTCAAT+TGG - chr3.3:58234318-58234337 None:intergenic 30.0%
AAGGAAGAGATGAAGTTATA+GGG + chr3.3:58232655-58232674 MS.gene049696:CDS 30.0%
AATACTCTCAATAACAATGG+TGG + chr3.3:58232735-58232754 MS.gene049696:CDS 30.0%
ACATCAAATGATTGGATGTT+AGG - chr3.3:58234056-58234075 None:intergenic 30.0%
ACCAAAAGATAGCCTATATA+TGG - chr3.3:58233959-58233978 None:intergenic 30.0%
ACTCAAAAACAGTCAACAAA+AGG + chr3.3:58231867-58231886 MS.gene049696:intron 30.0%
ACTTAACATATTAGGGAGAA+TGG + chr3.3:58231776-58231795 MS.gene049696:intron 30.0%
AGAGATAGGAAATATCCAAA+TGG + chr3.3:58232081-58232100 MS.gene049696:CDS 30.0%
ATAATGAATTCAAGGCTGAA+AGG + chr3.3:58233803-58233822 MS.gene049696:CDS 30.0%
ATACTCTCAATAACAATGGT+GGG + chr3.3:58232736-58232755 MS.gene049696:CDS 30.0%
ATCCATGCAAACAAAAATAG+AGG + chr3.3:58231437-58231456 MS.gene049696:intron 30.0%
CAAAGTCAGAATATGTGAAA+AGG + chr3.3:58234963-58234982 MS.gene049696:CDS 30.0%
CACAAGATCAATTGAAATTG+GGG + chr3.3:58233774-58233793 MS.gene049696:CDS 30.0%
CATAGAAATCCACCATATAT+AGG + chr3.3:58233944-58233963 MS.gene049696:intron 30.0%
CATAGTAATGAGGAAATAGT+TGG + chr3.3:58231837-58231856 MS.gene049696:intron 30.0%
CTCAAATTATTTGATGCCAT+GGG + chr3.3:58232680-58232699 MS.gene049696:CDS 30.0%
CTGTACTCTTCTTGAATATA+CGG - chr3.3:58232536-58232555 None:intergenic 30.0%
GAAACAACAAAAGTTAGTCA+TGG + chr3.3:58234647-58234666 MS.gene049696:CDS 30.0%
GAAATTAACTAGTAGTACCT+TGG - chr3.3:58232874-58232893 None:intergenic 30.0%
GAGATAGGAAATATCCAAAT+GGG + chr3.3:58232082-58232101 MS.gene049696:CDS 30.0%
GTCAATCAGAACAAAATAAG+AGG - chr3.3:58231547-58231566 None:intergenic 30.0%
GTGAAAAGGAAATATAGCTA+TGG + chr3.3:58234977-58234996 MS.gene049696:CDS 30.0%
TACATGTGACATCAAATGAT+TGG - chr3.3:58234064-58234083 None:intergenic 30.0%
TCTTCATCATTTCCCAATTA+TGG + chr3.3:58232825-58232844 MS.gene049696:CDS 30.0%
TCTTCCTCTATAGTAAACTA+GGG - chr3.3:58232205-58232224 None:intergenic 30.0%
TCTTCTTAATTATTTGCAGG+TGG + chr3.3:58233396-58233415 MS.gene049696:intron 30.0%
TGAACTTTGATTGTTTGTGA+AGG - chr3.3:58234725-58234744 None:intergenic 30.0%
TGTACGGACCAAAATTTAAA+AGG - chr3.3:58233278-58233297 None:intergenic 30.0%
TTGGATATTTCCTATCTCTA+GGG - chr3.3:58232080-58232099 None:intergenic 30.0%
TTGGGAAATGATGAAGATAT+TGG - chr3.3:58232822-58232841 None:intergenic 30.0%
TTTCAAGCTTCAAAACAAAG+AGG + chr3.3:58234328-58234347 MS.gene049696:CDS 30.0%
TTTGGATATTTCCTATCTCT+AGG - chr3.3:58232081-58232100 None:intergenic 30.0%
! ACCATATATAGGCTATCTTT+TGG + chr3.3:58233955-58233974 MS.gene049696:intron 30.0%
! ATATGATTGGTTAATGTGGA+CGG + chr3.3:58232348-58232367 MS.gene049696:intron 30.0%
! CTTTTCACATATTCTGACTT+TGG - chr3.3:58234965-58234984 None:intergenic 30.0%
! GATATATTGATGACAAAGCA+TGG + chr3.3:58233740-58233759 MS.gene049696:CDS 30.0%
! GATGGTAGAGAATTTAAGAT+GGG + chr3.3:58233825-58233844 MS.gene049696:CDS 30.0%
!! CAAGAGAAAATTTGGTTTGT+TGG + chr3.3:58235034-58235053 MS.gene049696:CDS 30.0%
!! GGATCTTGATAATGAATTCA+AGG + chr3.3:58233795-58233814 MS.gene049696:CDS 30.0%
!! TTGTTTGTGAAGGTGTTATT+TGG - chr3.3:58234715-58234734 None:intergenic 30.0%
!!! AACCTCTATTTTTGTTTGCA+TGG - chr3.3:58231442-58231461 None:intergenic 30.0%
!!! GCCAATTTGTTACAGATTTT+TGG + chr3.3:58232920-58232939 MS.gene049696:intron 30.0%
!!! TTGTTGACTGTTTTTGAGTT+GGG - chr3.3:58231866-58231885 None:intergenic 30.0%
!!! TTTGTTGACTGTTTTTGAGT+TGG - chr3.3:58231867-58231886 None:intergenic 30.0%
!!! TTTTATGGAAGAGCATCAAA+AGG + chr3.3:58234287-58234306 MS.gene049696:CDS 30.0%
AAAGAAAGATTAATGGCCGT+AGG + chr3.3:58231142-58231161 MS.gene049696:CDS 35.0%
AACAAAGAGGAAAGAGAATG+AGG + chr3.3:58234341-58234360 MS.gene049696:CDS 35.0%
ACCAATAGAGCAACAAAATC+TGG + chr3.3:58232111-58232130 MS.gene049696:CDS 35.0%
ACTTGTAGAGATCAACTTCA+GGG - chr3.3:58231185-58231204 None:intergenic 35.0%
AGTTCAACTCAATCCAATTC+TGG + chr3.3:58234739-58234758 MS.gene049696:CDS 35.0%
ATCAAGGATACTCTCTCTTA+AGG + chr3.3:58234810-58234829 MS.gene049696:CDS 35.0%
ATGCATGTGAGTAGTTTGAT+TGG - chr3.3:58233621-58233640 None:intergenic 35.0%
ATTAGGTGTGGATCCATAAT+TGG - chr3.3:58232841-58232860 None:intergenic 35.0%
CACATTCTCTTTCATCAAGA+CGG - chr3.3:58232269-58232288 None:intergenic 35.0%
CAGAATTCATACCAACTTGA+GGG - chr3.3:58233489-58233508 None:intergenic 35.0%
CTCTCTCTTAAGGAAGTTTA+AGG + chr3.3:58234820-58234839 MS.gene049696:CDS 35.0%
CTCTTCCTCTATAGTAAACT+AGG - chr3.3:58232206-58232225 None:intergenic 35.0%
GAAACACATGCTTGCTTTAT+TGG + chr3.3:58231707-58231726 MS.gene049696:intron 35.0%
GAAGGAAGAGATGAAGTTAT+AGG + chr3.3:58232654-58232673 MS.gene049696:CDS 35.0%
GAGAATGGTCCTTCAAAATA+GGG + chr3.3:58231791-58231810 MS.gene049696:intron 35.0%
GAGCAACAAAATCTGGATAT+TGG + chr3.3:58232118-58232137 MS.gene049696:CDS 35.0%
GAGGCGTACTTAACATATTA+GGG + chr3.3:58231769-58231788 MS.gene049696:intron 35.0%
GCAAATATATAACTAGGTCG+AGG + chr3.3:58231941-58231960 MS.gene049696:intron 35.0%
GCTCAAATTATTTGATGCCA+TGG + chr3.3:58232679-58232698 MS.gene049696:CDS 35.0%
GGAATGAGCAAGAGAAAATT+TGG + chr3.3:58235026-58235045 MS.gene049696:CDS 35.0%
GGATGGTAGAGAATTTAAGA+TGG + chr3.3:58233824-58233843 MS.gene049696:CDS 35.0%
GGTGCTTTGTGTTTATTTGA+AGG + chr3.3:58234919-58234938 MS.gene049696:CDS 35.0%
GTCAAGCAATGATTTAGAGA+AGG + chr3.3:58233855-58233874 MS.gene049696:CDS 35.0%
TACAAGCTATGAAGTTGTTG+AGG + chr3.3:58234625-58234644 MS.gene049696:CDS 35.0%
TCAAAAGGTTGTTCCAATTG+AGG + chr3.3:58234302-58234321 MS.gene049696:CDS 35.0%
TCAAACTACTCACATGCATT+TGG + chr3.3:58233622-58233641 MS.gene049696:CDS 35.0%
TCAGAATTCATACCAACTTG+AGG - chr3.3:58233490-58233509 None:intergenic 35.0%
TGTTTATTTGAAGGAGCAAG+TGG + chr3.3:58234928-58234947 MS.gene049696:CDS 35.0%
TTAACTAGTAGTACCTTGGA+TGG - chr3.3:58232870-58232889 None:intergenic 35.0%
TTAGGTGTGGATCCATAATT+GGG - chr3.3:58232840-58232859 None:intergenic 35.0%
TTGGTCAGTGTTCAAAACTA+AGG - chr3.3:58231483-58231502 None:intergenic 35.0%
! AAGATGACACAATTAGTCTC+AGG + chr3.3:58233514-58233533 MS.gene049696:CDS 35.0%
! AGAGGCGTACTTAACATATT+AGG + chr3.3:58231768-58231787 MS.gene049696:intron 35.0%
! ATTAGTCCCATTCGTGTTTT+GGG - chr3.3:58232718-58232737 None:intergenic 35.0%
! GGCCATTAATCTTTCTTTTG+AGG - chr3.3:58231140-58231159 None:intergenic 35.0%
! GTAGAGAATTTAAGATGGGT+TGG + chr3.3:58233829-58233848 MS.gene049696:CDS 35.0%
! TACCATTCCAAATCTTTTCC+CGG - chr3.3:58232048-58232067 None:intergenic 35.0%
! TAGGGTTTTCTTCATTCCAA+CGG - chr3.3:58232187-58232206 None:intergenic 35.0%
! TATTAGTCCCATTCGTGTTT+TGG - chr3.3:58232719-58232738 None:intergenic 35.0%
! TCCAGATTTTGTTGCTCTAT+TGG - chr3.3:58232115-58232134 None:intergenic 35.0%
!! AGAGAGTATCCTTGATTCTT+TGG - chr3.3:58234806-58234825 None:intergenic 35.0%
!! AGGTTGATCTTTTCATCTCA+AGG - chr3.3:58231527-58231546 None:intergenic 35.0%
!! CAACAGTAACCCTATTTTGA+AGG - chr3.3:58231803-58231822 None:intergenic 35.0%
!! GCACTTGCTATTATCTTTGA+TGG - chr3.3:58234872-58234891 None:intergenic 35.0%
!! TTCATTTCTAGTTCCACTCA+TGG - chr3.3:58233542-58233561 None:intergenic 35.0%
!!! ATTTTTTCAGCCCTAGAGAT+AGG + chr3.3:58232067-58232086 MS.gene049696:CDS 35.0%
AAACAAGTTCTTCATCGGTG+GGG - chr3.3:58231110-58231129 None:intergenic 40.0%
AACTACTCACATGCATTTGG+TGG + chr3.3:58233625-58233644 MS.gene049696:CDS 40.0%
ACAGTGATTGCTCCAAAAGT+TGG + chr3.3:58232552-58232571 MS.gene049696:CDS 40.0%
AGAAACAAGTTCTTCATCGG+TGG - chr3.3:58231112-58231131 None:intergenic 40.0%
AGTGATTGCTCCAAAAGTTG+GGG + chr3.3:58232554-58232573 MS.gene049696:CDS 40.0%
ATATAGCACTAGAGTGTGCA+AGG + chr3.3:58233419-58233438 MS.gene049696:CDS 40.0%
ATCTCTACAAGTGTGAACCA+TGG + chr3.3:58231193-58231212 MS.gene049696:CDS 40.0%
ATTGCTACCGGGAAAAGATT+TGG + chr3.3:58232038-58232057 MS.gene049696:CDS 40.0%
CACTTGTAGAGATCAACTTC+AGG - chr3.3:58231186-58231205 None:intergenic 40.0%
CAGTGATTGCTCCAAAAGTT+GGG + chr3.3:58232553-58232572 MS.gene049696:CDS 40.0%
CGTCAAGGTACATAGTAATG+AGG + chr3.3:58231827-58231846 MS.gene049696:intron 40.0%
GAAACAAGTTCTTCATCGGT+GGG - chr3.3:58231111-58231130 None:intergenic 40.0%
GAAAGAATGTGTCTGCTACT+TGG - chr3.3:58234691-58234710 None:intergenic 40.0%
GGAGAATGGTCCTTCAAAAT+AGG + chr3.3:58231790-58231809 MS.gene049696:intron 40.0%
TACCGGGAAAAGATTTGGAA+TGG + chr3.3:58232043-58232062 MS.gene049696:CDS 40.0%
TATAGGGAAGTCATTGCTAC+CGG + chr3.3:58232026-58232045 MS.gene049696:intron 40.0%
TCTCTACAAGTGTGAACCAT+GGG + chr3.3:58231194-58231213 MS.gene049696:CDS 40.0%
TGAATTCAAGGCTGAAAGGA+TGG + chr3.3:58233807-58233826 MS.gene049696:CDS 40.0%
TGATCTCCAACTCAATCCTA+CGG - chr3.3:58231161-58231180 None:intergenic 40.0%
TTTCATTGCCTCCTGGATTT+AGG + chr3.3:58231079-58231098 MS.gene049696:CDS 40.0%
! ACATATTGCTCCCCAACTTT+TGG - chr3.3:58232567-58232586 None:intergenic 40.0%
! AGCATTGAGTTGTACTCTGA+AGG + chr3.3:58232636-58232655 MS.gene049696:CDS 40.0%
! TATCATATGGTTAGCCCACA+TGG - chr3.3:58235137-58235156 None:intergenic 40.0%
!! CTATTGGTTCTTGACCCATT+TGG - chr3.3:58232099-58232118 None:intergenic 40.0%
!! TCACAAGGGATGATGGAATT+TGG + chr3.3:58232763-58232782 MS.gene049696:CDS 40.0%
!! TTTGGCTCTTTGTACCATGT+GGG + chr3.3:58235120-58235139 MS.gene049696:CDS 40.0%
AATCCAGGAGGCAATGAAAC+AGG - chr3.3:58231078-58231097 None:intergenic 45.0%
ACCTAATTACCCTCCATCCA+AGG + chr3.3:58232854-58232873 MS.gene049696:CDS 45.0%
ACCTTGGATGGAGGGTAATT+AGG - chr3.3:58232858-58232877 None:intergenic 45.0%
ACTAGTAGTACCTTGGATGG+AGG - chr3.3:58232867-58232886 None:intergenic 45.0%
AGCACATCCCAAAACACGAA+TGG + chr3.3:58232708-58232727 MS.gene049696:CDS 45.0%
AGGAAAGAGAATGAGGTGCA+AGG + chr3.3:58234348-58234367 MS.gene049696:CDS 45.0%
AGTGTGCAAGGATGCAACAT+AGG + chr3.3:58233431-58233450 MS.gene049696:CDS 45.0%
ATAGGGAAGTCATTGCTACC+GGG + chr3.3:58232027-58232046 MS.gene049696:intron 45.0%
ATTATACCTGGCAAGTCCCA+TGG - chr3.3:58231213-58231232 None:intergenic 45.0%
CATGGTTCAAACCTGCAAAC+CGG - chr3.3:58232304-58232323 None:intergenic 45.0%
CTAGTAGTACCTTGGATGGA+GGG - chr3.3:58232866-58232885 None:intergenic 45.0%
GCACATCCCAAAACACGAAT+GGG + chr3.3:58232709-58232728 MS.gene049696:CDS 45.0%
GGTTACTGTTGTGAACGTCA+AGG + chr3.3:58231812-58231831 MS.gene049696:intron 45.0%
TAATGGCCGTAGGATTGAGT+TGG + chr3.3:58231152-58231171 MS.gene049696:CDS 45.0%
TCTGGATATTGGAAGGCAAC+TGG + chr3.3:58232129-58232148 MS.gene049696:CDS 45.0%
TTAGTCTCAGGTTCCATGAG+TGG + chr3.3:58233526-58233545 MS.gene049696:CDS 45.0%
! ACAATGGTGGGAATGTCACA+AGG + chr3.3:58232748-58232767 MS.gene049696:CDS 45.0%
! CAATGGTGGGAATGTCACAA+GGG + chr3.3:58232749-58232768 MS.gene049696:CDS 45.0%
! GAGGTGGTCTTGAAGAAGAT+AGG + chr3.3:58235079-58235098 MS.gene049696:CDS 45.0%
! TAGGTTTTCTTTGCCTCCCT+TGG + chr3.3:58233450-58233469 MS.gene049696:CDS 45.0%
! TTTTCTTCATTCCAACGGCG+CGG - chr3.3:58232182-58232201 None:intergenic 45.0%
!! CTTTGGCTCTTTGTACCATG+TGG + chr3.3:58235119-58235138 MS.gene049696:CDS 45.0%
!!! TTCGTGTTTTGGGATGTGCT+TGG - chr3.3:58232708-58232727 None:intergenic 45.0%
!! AATATTTAATAAATTAACAT+TGG + chr3.3:58234231-58234250 MS.gene049696:intron 5.0%
!! ATTAAATATTCAATATTATA+GGG - chr3.3:58234221-58234240 None:intergenic 5.0%
!! TATTAAATATTCAATATTAT+AGG - chr3.3:58234222-58234241 None:intergenic 5.0%
!!! TTTTTTAATAAAAATAGTAA+AGG + chr3.3:58232427-58232446 MS.gene049696:intron 5.0%
GAATGTGACAATCCTTCCGC+CGG + chr3.3:58232282-58232301 MS.gene049696:CDS 50.0%
GGATGGAGGGTAATTAGGTG+TGG - chr3.3:58232853-58232872 None:intergenic 50.0%
GGCAACTGGAAAAGATCGCA+AGG + chr3.3:58232143-58232162 MS.gene049696:CDS 50.0%
GGGAATGTCACAAGGGATGA+TGG + chr3.3:58232756-58232775 MS.gene049696:CDS 50.0%
GTGGAAGACTTCCCTCAAGT+TGG + chr3.3:58233475-58233494 MS.gene049696:CDS 50.0%
TTTCTTCATTCCAACGGCGC+GGG - chr3.3:58232181-58232200 None:intergenic 50.0%
! GTTTTCTTTGCCTCCCTTGG+AGG + chr3.3:58233453-58233472 MS.gene049696:CDS 50.0%
!! TATAGAGGAAGAGCACCCCA+TGG + chr3.3:58232213-58232232 MS.gene049696:CDS 50.0%
AAGTCTTCCACCTCCAAGGG+AGG - chr3.3:58233466-58233485 None:intergenic 55.0%
AGCACCCCATGGATCTCGTA+CGG + chr3.3:58232224-58232243 MS.gene049696:CDS 55.0%
AGGGAAGTCTTCCACCTCCA+AGG - chr3.3:58233470-58233489 None:intergenic 55.0%
CAACCCGTACGAGATCCATG+GGG - chr3.3:58232231-58232250 None:intergenic 55.0%
CAAGTTCTTCATCGGTGGGG+TGG - chr3.3:58231107-58231126 None:intergenic 55.0%
CCAACCCGTACGAGATCCAT+GGG - chr3.3:58232232-58232251 None:intergenic 55.0%
CCATGGATCTCGTACGGGTT+GGG + chr3.3:58232230-58232249 MS.gene049696:CDS 55.0%
GCACCTGTTTCATTGCCTCC+TGG + chr3.3:58231072-58231091 MS.gene049696:CDS 55.0%
GGGAAGTCTTCCACCTCCAA+GGG - chr3.3:58233469-58233488 None:intergenic 55.0%
GGGTGGAACCTAAATCCAGG+AGG - chr3.3:58231090-58231109 None:intergenic 55.0%
GGTTCAAACCTGCAAACCGG+CGG - chr3.3:58232301-58232320 None:intergenic 55.0%
GTGGGGTGGAACCTAAATCC+AGG - chr3.3:58231093-58231112 None:intergenic 55.0%
TGGGATGTGCTTGGATCCCA+TGG - chr3.3:58232699-58232718 None:intergenic 55.0%
TGTGAACCATGGGACTTGCC+AGG + chr3.3:58231204-58231223 MS.gene049696:CDS 55.0%
TTCTTTGCCTCCCTTGGAGG+TGG + chr3.3:58233456-58233475 MS.gene049696:CDS 55.0%
CAAACCTGCAAACCGGCGGA+AGG - chr3.3:58232297-58232316 None:intergenic 60.0%
CCCAACCCGTACGAGATCCA+TGG - chr3.3:58232233-58232252 None:intergenic 60.0%
CCCATGGATCTCGTACGGGT+TGG + chr3.3:58232229-58232248 MS.gene049696:CDS 60.0%
GCACCCCATGGATCTCGTAC+GGG + chr3.3:58232225-58232244 MS.gene049696:CDS 60.0%
!! CAATCCTTCCGCCGGTTTGC+AGG + chr3.3:58232290-58232309 MS.gene049696:CDS 60.0%
AATGCTCAGACCCGCGCCGT+TGG + chr3.3:58232168-58232187 MS.gene049696:CDS 65.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 58231069 58235168 58231069 ID=MS.gene049696
chr3.3 mRNA 58231069 58235168 58231069 ID=MS.gene049696.t1;Parent=MS.gene049696
chr3.3 exon 58231069 58231225 58231069 ID=MS.gene049696.t1.exon1;Parent=MS.gene049696.t1
chr3.3 CDS 58231069 58231225 58231069 ID=cds.MS.gene049696.t1;Parent=MS.gene049696.t1
chr3.3 exon 58232031 58232311 58232031 ID=MS.gene049696.t1.exon2;Parent=MS.gene049696.t1
chr3.3 CDS 58232031 58232311 58232031 ID=cds.MS.gene049696.t1;Parent=MS.gene049696.t1
chr3.3 exon 58232516 58232875 58232516 ID=MS.gene049696.t1.exon3;Parent=MS.gene049696.t1
chr3.3 CDS 58232516 58232875 58232516 ID=cds.MS.gene049696.t1;Parent=MS.gene049696.t1
chr3.3 exon 58233415 58233876 58233415 ID=MS.gene049696.t1.exon4;Parent=MS.gene049696.t1
chr3.3 CDS 58233415 58233876 58233415 ID=cds.MS.gene049696.t1;Parent=MS.gene049696.t1
chr3.3 exon 58234285 58234369 58234285 ID=MS.gene049696.t1.exon5;Parent=MS.gene049696.t1
chr3.3 CDS 58234285 58234369 58234285 ID=cds.MS.gene049696.t1;Parent=MS.gene049696.t1
chr3.3 exon 58234492 58235168 58234492 ID=MS.gene049696.t1.exon6;Parent=MS.gene049696.t1
chr3.3 CDS 58234492 58235168 58234492 ID=cds.MS.gene049696.t1;Parent=MS.gene049696.t1
Gene Sequence

>MS.gene049696

ATGGCACCTGTTTCATTGCCTCCTGGATTTAGGTTCCACCCCACCGATGAAGAACTTGTTTCTTATTACCTCAAAAGAAAGATTAATGGCCGTAGGATTGAGTTGGAGATCATCCCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAGGTATAATATTATATGACATGAGTTTAATTTTTATGATTGTCAATTTTTTTCTTCTATATATCTTCATTTAATTTTTATGATTGTCAATTTTTTTCTTATATATATCTTCAAACAATCACAATCATTTTTATCTGTGACTTTTATAAGTTAGTTTTAAAATCAAATATTTTTAATGATTTATAAAAGTGACATTGTGTAACATCTTTCATCAATCCATGCAAACAAAAATAGAGGTTTCAAAATTCATTTTTTGACCTTAGTTTTGAACACTGACCAAAGATAATTTTATAAGAAGAGGCCTTGAGATGAAAAGATCAACCTCTTATTTTGTTCTGATTGACAAAATCATTATTGGTTAATGTGGCTTGCAATATTCAGAAGTGCTTTTAACAATCAAAACAAATTAAAAGAATCTTAAAAAAGTGAAGGCACATTTCTTTAGACACGATTTGCTTCTAATCATCTTTATTCTTCAATATACGAAACACATGCTTGCTTTATTGGTCAAGTATATTTTTTTTCCACTTTGGCATAAAATATTTAGAGGCGTACTTAACATATTAGGGAGAATGGTCCTTCAAAATAGGGTTACTGTTGTGAACGTCAAGGTACATAGTAATGAGGAAATAGTTGGATTCCCAACTCAAAAACAGTCAACAAAAGGAAAGGATCCCATATTAAAGAAGATTTCTTAATTTTCAGCCTTTCAAAACATGCAAATATATAACTAGGTCGAGGTGTTTTTAAAAAGTGTTATGATTTTAACGAATTGTTATTATTATTATTATGCATGAAATCATTATAGGGAAGTCATTGCTACCGGGAAAAGATTTGGAATGGTATTTTTTCAGCCCTAGAGATAGGAAATATCCAAATGGGTCAAGAACCAATAGAGCAACAAAATCTGGATATTGGAAGGCAACTGGAAAAGATCGCAAGGTGAATGCTCAGACCCGCGCCGTTGGAATGAAGAAAACCCTAGTTTACTATAGAGGAAGAGCACCCCATGGATCTCGTACGGGTTGGGTTATGCATGAGTACCGTCTTGATGAAAGAGAATGTGACAATCCTTCCGCCGGTTTGCAGGTTTGAACCATGAACCTAACTTTATTACTAACTAGTATATGATTGGTTAATGTGGACGGTAGACTCTATTATTTTTAGTAAATTTAATAAGAAATTTTGAGAGGAATAAAATTATTTTTTTAATAAAAATAGTAAAGGTCCACCTATTGATCATTTTTTATTATATACAATAATATGTTTGATTGAAAAAAATTGTGATTTCAGGATGCATATGCTCTTTGCCGTATATTCAAGAAGAGTACAGTGATTGCTCCAAAAGTTGGGGAGCAATATGTTAATAATGTGACTAGGCATGCAAATCATATGACAAGTGATCAATCATCAAGCATTGAGTTGTACTCTGAAGGAAGAGATGAAGTTATAGGGAGCTCAAATTATTTGATGCCATGGGATCCAAGCACATCCCAAAACACGAATGGGACTAATACTCTCAATAACAATGGTGGGAATGTCACAAGGGATGATGGAATTTGGACACAATTCTTATCAGAAGACTTACTCAGTCTTCCAATATCTTCATCATTTCCCAATTATGGATCCACACCTAATTACCCTCCATCCAAGGTACTACTAGTTAATTTCTTTTACACCAAAACTTAATTAAATAGGCCAATTTGTTACAGATTTTTGGTGAAAAATAAAATCACTTTTATGAGTTTTTTTTTGACAAAGCTTTTATGATTTTTTATTTTTATGTGATTATTGTACGGATTTTAAAAAAATAAGAATCTGAAGGAAAAAAAATATAAAAAGCTCCAAATAAAAAGTTGTTTAGAGGAGTTTCTCTTGAAAATCATTTTTGATAGATATTTTAGAATAAATTTGAATCATTATGATAAGAAATACAAAATACCTTATTGTTTTTTAAATCTGTAAACTATTGAATATTATAATGATATTTTTTACTATTTTTTTTTTTTTTTTTATAATTTGTAATAAACACAAGTTATAAATTAACTTTTACCTTTTAAATTTTGGTCCGTACAATAATAAAGATTTTAAAGCCTCCACAATGTAAAATAATTCTAGATTCAATGTCATTACAATTTCCTATAATTTATTTGGTCATGAATTTTAAAAAAATTCTTCTTAATTATTTGCAGGTGGATATAGCACTAGAGTGTGCAAGGATGCAACATAGGTTTTCTTTGCCTCCCTTGGAGGTGGAAGACTTCCCTCAAGTTGGTATGAATTCTGAGCTGAAGATGACACAATTAGTCTCAGGTTCCATGAGTGGAACTAGAAATGAAACAGATATCTTGCAGGAAATTCTATCTGTAGCTCAAGCTTCTCAAGAATTGATAAACCAATCAAACTACTCACATGCATTTGGTGGCAATGAAAATTATGCTACTGATCATGAAAATGATTTTACTTTTATGGTTGGAAATAATTACAATCATGTGACTGATCATATGAATTCCATGAGATATATTGATGACAAAGCATGGGAAGATCCAAACACAAGATCAATTGAAATTGGGGATCTTGATAATGAATTCAAGGCTGAAAGGATGGTAGAGAATTTAAGATGGGTTGGAATGTCAAGCAATGATTTAGAGAAGGTATGCTAGCTATATTGCTAATATATAAATTTAAAGTGTCATTTAAGATAAGATCTTATATGTCAATCATAGAAATCCACCATATATAGGCTATCTTTTGGTATATTATAAAGTCCCAAAAATGGATTTTAAAAATGCGACAACTCCCATACCCTAGAATTTTATTAAGTATACTACCTAACATCCAATCATTTGATGTCACATGTACTCTTTAATATTTAATTATTTTTAAGTGAATAATTTAATTTTTTTTTTATTAATGTTATCTTTTGAGTATTGGTATCTTTATTATTCTTATGAGTACTATCAAGGAATTCTTCTTTTGAAATTGCTAGCCTAAACCCTATAATATTGAATATTTAATAAATTAACATTGGACTTTATATGATTATTTGAATAATTTTACAGAGTTTTATGGAAGAGCATCAAAAGGTTGTTCCAATTGAGGAAATTTCAAGCTTCAAAACAAAGAGGAAAGAGAATGAGGTGCAAGGTATTATTATTAATTAAAAATTAAATGCATGATTTATTTTTGTAATTGACCTTGGATTTTTTTTAACTTACTATTTATTTTTATAAACCAAATTGACTAACAATAGCTTTTGTACTTTACAGTAGAATCTGAGCAACCAAATATCAACAAAGAAGTCAATGATGCTAACATTGATAATTTCTCAATGGGGTTTATCAATGATAATGACCCTAATGAGAATTTTATAGATGATGGTAACATTGATTATTCAAATTCTACAAGCTATGAAGTTGTTGAGGAAACAACAAAAGTTAGTCATGGAATGTTTGTTGCTACACGCCAAGTAGCAGACACATTCTTTCACCAAATAACACCTTCACAAACAATCAAAGTTCAACTCAATCCAATTCTGGAAAATAAAAAATCTATAGAGAATGCAGAGACAATGATTATACCAAAGAATCAAGGATACTCTCTCTTAAGGAAGTTTAAGGCTAATTTGATGAAGTACATGAAAAATCCATCAAAGATAATAGCAAGTGCAATTGTGTTCATATTTGCACTTTTTTTGGTGCTTTGTGTTTATTTGAAGGAGCAAGTGGAAGATATGAAACCAAAGTCAGAATATGTGAAAAGGAAATATAGCTATGGAGCTAATAGCATGAAGAAAATCATTTGGAATGAGCAAGAGAAAATTTGGTTTGTTGGTATCAAAAGTGGTAAAGGTTTTGAGGTGGTCTTGAAGAAGATAGGAATTTTCCTAACTATATCTTTGGCTCTTTGTACCATGTGGGCTAACCATATGATAGTTTGTTATTGA
Protein sequence

>MS.gene049696.t1

MAPVSLPPGFRFHPTDEELVSYYLKRKINGRRIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNAQTRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRLDERECDNPSAGLQDAYALCRIFKKSTVIAPKVGEQYVNNVTRHANHMTSDQSSSIELYSEGRDEVIGSSNYLMPWDPSTSQNTNGTNTLNNNGGNVTRDDGIWTQFLSEDLLSLPISSSFPNYGSTPNYPPSKVDIALECARMQHRFSLPPLEVEDFPQVGMNSELKMTQLVSGSMSGTRNETDILQEILSVAQASQELINQSNYSHAFGGNENYATDHENDFTFMVGNNYNHVTDHMNSMRYIDDKAWEDPNTRSIEIGDLDNEFKAERMVENLRWVGMSSNDLEKSFMEEHQKVVPIEEISSFKTKRKENEVQVESEQPNINKEVNDANIDNFSMGFINDNDPNENFIDDGNIDYSNSTSYEVVEETTKVSHGMFVATRQVADTFFHQITPSQTIKVQLNPILENKKSIENAETMIIPKNQGYSLLRKFKANLMKYMKNPSKIIASAIVFIFALFLVLCVYLKEQVEDMKPKSEYVKRKYSYGANSMKKIIWNEQEKIWFVGIKSGKGFEVVLKKIGIFLTISLALCTMWANHMIVCY