Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051287.t1 | XP_013448512.1 | 99.1 | 459 | 4 | 0 | 1 | 459 | 1 | 459 | 5.90E-254 | 886.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051287.t1 | Q9SRT0 | 49.1 | 464 | 227 | 5 | 1 | 459 | 1 | 460 | 4.9e-108 | 392.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051287.t1 | A0A072TYF9 | 99.1 | 459 | 4 | 0 | 1 | 459 | 1 | 459 | 4.3e-254 | 886.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene051287 | MS.gene016580 | PPI |
MS.gene88463 | MS.gene051287 | PPI |
MS.gene61080 | MS.gene051287 | PPI |
MS.gene61746 | MS.gene051287 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051287.t1 | MTR_7g053260 | 99.129 | 459 | 4 | 0 | 1 | 459 | 1 | 459 | 0.0 | 932 |
MS.gene051287.t1 | MTR_7g116600 | 55.361 | 457 | 191 | 4 | 14 | 459 | 6 | 460 | 1.26e-163 | 469 |
MS.gene051287.t1 | MTR_1g079450 | 48.980 | 441 | 214 | 6 | 21 | 457 | 11 | 444 | 1.03e-124 | 370 |
MS.gene051287.t1 | MTR_4g485520 | 38.250 | 400 | 231 | 9 | 62 | 452 | 89 | 481 | 6.12e-85 | 269 |
MS.gene051287.t1 | MTR_4g485520 | 38.250 | 400 | 231 | 9 | 62 | 452 | 257 | 649 | 7.70e-83 | 268 |
MS.gene051287.t1 | MTR_4g063800 | 39.005 | 382 | 219 | 8 | 78 | 452 | 255 | 629 | 1.46e-79 | 260 |
MS.gene051287.t1 | MTR_1g094215 | 40.052 | 387 | 218 | 8 | 73 | 452 | 59 | 438 | 4.53e-76 | 245 |
MS.gene051287.t1 | MTR_1g094215 | 36.717 | 463 | 268 | 10 | 8 | 452 | 166 | 621 | 3.06e-74 | 245 |
MS.gene051287.t1 | MTR_7g078330 | 36.053 | 380 | 232 | 8 | 75 | 451 | 271 | 642 | 1.14e-63 | 217 |
MS.gene051287.t1 | MTR_7g059405 | 35.958 | 381 | 221 | 9 | 79 | 449 | 265 | 632 | 1.46e-63 | 217 |
MS.gene051287.t1 | MTR_5g083030 | 34.559 | 408 | 234 | 14 | 76 | 457 | 291 | 691 | 8.64e-57 | 199 |
MS.gene051287.t1 | MTR_2g018010 | 33.838 | 396 | 238 | 11 | 76 | 454 | 290 | 678 | 4.70e-54 | 192 |
MS.gene051287.t1 | MTR_4g028960 | 32.759 | 406 | 251 | 11 | 64 | 451 | 264 | 665 | 3.78e-46 | 170 |
MS.gene051287.t1 | MTR_4g107010 | 27.595 | 395 | 266 | 7 | 72 | 450 | 274 | 664 | 3.97e-39 | 150 |
MS.gene051287.t1 | MTR_3g078160 | 29.714 | 350 | 222 | 9 | 75 | 408 | 272 | 613 | 6.35e-39 | 149 |
MS.gene051287.t1 | MTR_3g078160 | 29.714 | 350 | 222 | 9 | 75 | 408 | 272 | 613 | 7.25e-39 | 149 |
MS.gene051287.t1 | MTR_5g034440 | 29.949 | 394 | 243 | 12 | 80 | 450 | 282 | 665 | 5.48e-37 | 144 |
MS.gene051287.t1 | MTR_1g018180 | 35.273 | 275 | 167 | 7 | 180 | 451 | 70 | 336 | 2.13e-35 | 134 |
MS.gene051287.t1 | MTR_3g466220 | 35.971 | 278 | 169 | 7 | 174 | 449 | 534 | 804 | 6.32e-35 | 138 |
MS.gene051287.t1 | MTR_3g466220 | 39.216 | 153 | 76 | 4 | 7 | 156 | 152 | 290 | 2.64e-22 | 100 |
MS.gene051287.t1 | MTR_3g466220 | 35.971 | 278 | 169 | 7 | 174 | 449 | 555 | 825 | 6.34e-35 | 138 |
MS.gene051287.t1 | MTR_3g466220 | 39.216 | 153 | 76 | 4 | 7 | 156 | 173 | 311 | 2.61e-22 | 100 |
MS.gene051287.t1 | MTR_1g069845 | 33.904 | 292 | 181 | 8 | 159 | 446 | 309 | 592 | 9.08e-35 | 137 |
MS.gene051287.t1 | MTR_1g069845 | 41.905 | 105 | 54 | 1 | 40 | 144 | 93 | 190 | 1.72e-21 | 97.8 |
MS.gene051287.t1 | MTR_1g069845 | 33.559 | 295 | 184 | 8 | 159 | 449 | 426 | 712 | 3.07e-34 | 136 |
MS.gene051287.t1 | MTR_1g069845 | 41.905 | 105 | 54 | 1 | 40 | 144 | 210 | 307 | 2.92e-21 | 97.4 |
MS.gene051287.t1 | MTR_1g069845 | 33.904 | 292 | 181 | 8 | 159 | 446 | 430 | 713 | 4.12e-34 | 135 |
MS.gene051287.t1 | MTR_1g069845 | 41.905 | 105 | 54 | 1 | 40 | 144 | 214 | 311 | 2.86e-21 | 97.4 |
MS.gene051287.t1 | MTR_2g011140 | 29.155 | 367 | 218 | 14 | 80 | 435 | 17 | 352 | 9.95e-33 | 128 |
MS.gene051287.t1 | MTR_7g097020 | 33.893 | 298 | 188 | 7 | 154 | 449 | 464 | 754 | 8.10e-32 | 129 |
MS.gene051287.t1 | MTR_7g097020 | 36.691 | 139 | 78 | 3 | 14 | 152 | 187 | 315 | 9.84e-21 | 95.9 |
MS.gene051287.t1 | MTR_3g078160 | 31.365 | 271 | 167 | 7 | 75 | 333 | 272 | 535 | 4.09e-31 | 126 |
MS.gene051287.t1 | MTR_3g103050 | 31.900 | 279 | 185 | 4 | 175 | 451 | 55 | 330 | 2.62e-30 | 120 |
MS.gene051287.t1 | MTR_4g091880 | 28.218 | 404 | 227 | 14 | 78 | 452 | 5 | 374 | 6.53e-27 | 111 |
MS.gene051287.t1 | MTR_8g080280 | 24.724 | 453 | 258 | 15 | 66 | 446 | 264 | 705 | 1.19e-26 | 114 |
MS.gene051287.t1 | MTR_4g091880 | 25.385 | 390 | 228 | 12 | 78 | 452 | 5 | 346 | 1.27e-26 | 110 |
MS.gene051287.t1 | MTR_3g085610 | 23.380 | 432 | 258 | 12 | 79 | 446 | 281 | 703 | 2.55e-25 | 109 |
MS.gene051287.t1 | MTR_1g093965 | 29.707 | 239 | 115 | 6 | 91 | 329 | 1 | 186 | 5.01e-24 | 99.8 |
MS.gene051287.t1 | MTR_5g020570 | 25.446 | 448 | 234 | 16 | 63 | 446 | 251 | 662 | 2.58e-23 | 103 |
MS.gene051287.t1 | MTR_5g020570 | 25.446 | 448 | 234 | 16 | 63 | 446 | 266 | 677 | 4.20e-23 | 103 |
MS.gene051287.t1 | MTR_3g078340 | 29.032 | 279 | 187 | 6 | 175 | 449 | 214 | 485 | 1.05e-22 | 101 |
MS.gene051287.t1 | MTR_1g093995 | 29.289 | 239 | 116 | 6 | 91 | 329 | 1 | 186 | 1.15e-22 | 95.9 |
MS.gene051287.t1 | MTR_4g085720 | 26.087 | 391 | 267 | 10 | 72 | 449 | 8 | 389 | 4.00e-22 | 98.6 |
MS.gene051287.t1 | MTR_2g026130 | 30.496 | 282 | 183 | 8 | 173 | 450 | 177 | 449 | 1.10e-20 | 94.7 |
MS.gene051287.t1 | MTR_5g048050 | 36.885 | 122 | 62 | 2 | 73 | 179 | 20 | 141 | 2.39e-20 | 93.6 |
MS.gene051287.t1 | MTR_8g077205 | 46.835 | 79 | 42 | 0 | 76 | 154 | 273 | 351 | 4.16e-20 | 94.0 |
MS.gene051287.t1 | MTR_8g077205 | 46.835 | 79 | 42 | 0 | 76 | 154 | 161 | 239 | 4.68e-20 | 93.6 |
MS.gene051287.t1 | MTR_3g065080 | 52.174 | 69 | 33 | 0 | 76 | 144 | 34 | 102 | 9.70e-20 | 91.7 |
MS.gene051287.t1 | MTR_5g015210 | 25.816 | 337 | 226 | 10 | 79 | 407 | 68 | 388 | 1.13e-19 | 91.7 |
MS.gene051287.t1 | MTR_6g071340 | 36.134 | 119 | 61 | 2 | 76 | 179 | 3 | 121 | 1.33e-19 | 90.9 |
MS.gene051287.t1 | MTR_8g092870 | 25.628 | 398 | 269 | 10 | 76 | 452 | 8 | 399 | 1.28e-18 | 88.2 |
MS.gene051287.t1 | MTR_3g096370 | 44.595 | 74 | 41 | 0 | 71 | 144 | 3 | 76 | 4.31e-18 | 86.3 |
MS.gene051287.t1 | MTR_1g017770 | 28.636 | 220 | 139 | 6 | 79 | 294 | 46 | 251 | 9.26e-18 | 85.5 |
MS.gene051287.t1 | MTR_7g117890 | 29.680 | 219 | 125 | 8 | 82 | 296 | 259 | 452 | 1.15e-17 | 86.7 |
MS.gene051287.t1 | MTR_6g008170 | 27.354 | 223 | 158 | 3 | 226 | 446 | 289 | 509 | 1.54e-16 | 82.4 |
MS.gene051287.t1 | MTR_5g077510 | 42.029 | 69 | 40 | 0 | 76 | 144 | 33 | 101 | 1.96e-16 | 81.6 |
MS.gene051287.t1 | MTR_1g056880 | 43.038 | 79 | 39 | 2 | 72 | 144 | 1 | 79 | 2.43e-16 | 81.3 |
MS.gene051287.t1 | MTR_1g056840 | 25.070 | 355 | 225 | 11 | 72 | 391 | 1 | 349 | 3.37e-16 | 80.9 |
MS.gene051287.t1 | MTR_7g106340 | 47.561 | 82 | 37 | 3 | 76 | 151 | 6 | 87 | 4.19e-16 | 80.5 |
MS.gene051287.t1 | MTR_3g095730 | 44.286 | 70 | 39 | 0 | 76 | 145 | 11 | 80 | 7.01e-16 | 79.7 |
MS.gene051287.t1 | MTR_1g056870 | 43.038 | 79 | 39 | 2 | 72 | 144 | 1 | 79 | 7.05e-16 | 79.7 |
MS.gene051287.t1 | MTR_8g027140 | 24.556 | 338 | 222 | 10 | 82 | 391 | 263 | 595 | 1.19e-14 | 77.0 |
MS.gene051287.t1 | MTR_3g115670 | 25.397 | 315 | 185 | 10 | 62 | 337 | 14 | 317 | 1.54e-14 | 76.6 |
MS.gene051287.t1 | MTR_4g051515 | 26.010 | 396 | 218 | 17 | 76 | 404 | 4 | 391 | 1.75e-13 | 72.4 |
MS.gene051287.t1 | MTR_2g087350 | 43.836 | 73 | 37 | 2 | 76 | 144 | 4 | 76 | 2.27e-13 | 72.0 |
MS.gene051287.t1 | MTR_1g090320 | 41.250 | 80 | 45 | 2 | 79 | 157 | 514 | 592 | 2.91e-13 | 72.8 |
MS.gene051287.t1 | MTR_1g090320 | 41.250 | 80 | 45 | 2 | 79 | 157 | 516 | 594 | 2.98e-13 | 72.8 |
MS.gene051287.t1 | MTR_5g032010 | 40.909 | 66 | 39 | 0 | 79 | 144 | 733 | 798 | 1.49e-12 | 70.5 |
MS.gene051287.t1 | MTR_7g077780 | 35.632 | 87 | 56 | 0 | 58 | 144 | 806 | 892 | 1.90e-12 | 70.1 |
MS.gene051287.t1 | MTR_1g056910 | 47.059 | 68 | 34 | 2 | 79 | 144 | 7 | 74 | 2.99e-12 | 68.6 |
MS.gene051287.t1 | MTR_7g005940 | 40.580 | 69 | 40 | 1 | 77 | 144 | 594 | 662 | 6.49e-12 | 68.6 |
MS.gene051287.t1 | MTR_7g005940 | 40.580 | 69 | 40 | 1 | 77 | 144 | 594 | 662 | 6.76e-12 | 68.6 |
MS.gene051287.t1 | MTR_2g096850 | 46.970 | 66 | 35 | 0 | 79 | 144 | 590 | 655 | 7.64e-12 | 67.8 |
MS.gene051287.t1 | MTR_2g096850 | 46.970 | 66 | 35 | 0 | 79 | 144 | 741 | 806 | 8.97e-12 | 67.8 |
MS.gene051287.t1 | MTR_1g100820 | 39.706 | 68 | 41 | 0 | 79 | 146 | 647 | 714 | 3.68e-11 | 65.9 |
MS.gene051287.t1 | MTR_1g100820 | 39.706 | 68 | 41 | 0 | 79 | 146 | 649 | 716 | 3.68e-11 | 65.9 |
MS.gene051287.t1 | MTR_8g103227 | 40.580 | 69 | 40 | 1 | 77 | 144 | 394 | 462 | 3.89e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051287.t1 | AT3G07360 | 57.759 | 464 | 187 | 5 | 1 | 459 | 1 | 460 | 0.0 | 519 |
MS.gene051287.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.92e-124 | 364 |
MS.gene051287.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.92e-124 | 364 |
MS.gene051287.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.92e-124 | 364 |
MS.gene051287.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.92e-124 | 364 |
MS.gene051287.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.92e-124 | 364 |
MS.gene051287.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.92e-124 | 364 |
MS.gene051287.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.92e-124 | 364 |
MS.gene051287.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.92e-124 | 364 |
MS.gene051287.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.92e-124 | 364 |
MS.gene051287.t1 | AT5G18320 | 42.763 | 456 | 221 | 12 | 21 | 453 | 12 | 450 | 3.42e-99 | 305 |
MS.gene051287.t1 | AT1G23030 | 38.718 | 390 | 226 | 8 | 66 | 451 | 229 | 609 | 1.26e-80 | 261 |
MS.gene051287.t1 | AT3G54850 | 36.575 | 473 | 272 | 11 | 6 | 458 | 165 | 629 | 3.24e-80 | 261 |
MS.gene051287.t1 | AT5G18340 | 38.681 | 455 | 235 | 14 | 19 | 447 | 16 | 452 | 1.09e-79 | 254 |
MS.gene051287.t1 | AT3G46510 | 38.155 | 401 | 231 | 9 | 59 | 452 | 240 | 630 | 7.85e-77 | 253 |
MS.gene051287.t1 | AT1G71020 | 37.221 | 403 | 235 | 10 | 60 | 451 | 77 | 472 | 1.28e-76 | 247 |
MS.gene051287.t1 | AT1G71020 | 37.221 | 403 | 235 | 10 | 60 | 451 | 225 | 620 | 5.86e-75 | 247 |
MS.gene051287.t1 | AT2G28830 | 38.120 | 383 | 222 | 7 | 79 | 451 | 185 | 562 | 2.76e-74 | 244 |
MS.gene051287.t1 | AT5G18330 | 37.018 | 389 | 226 | 7 | 76 | 451 | 63 | 445 | 2.97e-65 | 217 |
MS.gene051287.t1 | AT5G42340 | 34.961 | 389 | 234 | 10 | 72 | 451 | 278 | 656 | 2.46e-58 | 203 |
MS.gene051287.t1 | AT5G01830 | 29.130 | 460 | 285 | 15 | 12 | 451 | 207 | 645 | 3.18e-45 | 167 |
MS.gene051287.t1 | AT1G29340 | 31.486 | 397 | 239 | 13 | 76 | 451 | 303 | 687 | 6.28e-43 | 161 |
MS.gene051287.t1 | AT2G23140 | 36.496 | 274 | 165 | 7 | 175 | 446 | 357 | 623 | 3.42e-39 | 150 |
MS.gene051287.t1 | AT2G23140 | 53.125 | 64 | 30 | 0 | 81 | 144 | 44 | 107 | 8.39e-19 | 89.7 |
MS.gene051287.t1 | AT2G23140 | 36.496 | 274 | 165 | 7 | 175 | 446 | 357 | 623 | 3.42e-39 | 150 |
MS.gene051287.t1 | AT2G23140 | 53.125 | 64 | 30 | 0 | 81 | 144 | 44 | 107 | 8.39e-19 | 89.7 |
MS.gene051287.t1 | AT2G23140 | 36.496 | 274 | 165 | 7 | 175 | 446 | 549 | 815 | 5.52e-39 | 150 |
MS.gene051287.t1 | AT2G23140 | 48.611 | 72 | 37 | 0 | 81 | 152 | 236 | 307 | 9.60e-19 | 89.7 |
MS.gene051287.t1 | AT2G23140 | 36.496 | 274 | 165 | 7 | 175 | 446 | 546 | 812 | 6.56e-39 | 150 |
MS.gene051287.t1 | AT2G23140 | 48.611 | 72 | 37 | 0 | 81 | 152 | 233 | 304 | 9.93e-19 | 89.7 |
MS.gene051287.t1 | AT2G23140 | 36.496 | 274 | 165 | 7 | 175 | 446 | 546 | 812 | 6.56e-39 | 150 |
MS.gene051287.t1 | AT2G23140 | 48.611 | 72 | 37 | 0 | 81 | 152 | 233 | 304 | 9.93e-19 | 89.7 |
MS.gene051287.t1 | AT5G67340 | 27.542 | 472 | 243 | 14 | 76 | 454 | 238 | 703 | 3.85e-38 | 147 |
MS.gene051287.t1 | AT5G67340 | 27.542 | 472 | 243 | 14 | 76 | 454 | 238 | 703 | 3.85e-38 | 147 |
MS.gene051287.t1 | AT3G01400 | 33.562 | 292 | 184 | 7 | 170 | 459 | 65 | 348 | 1.56e-35 | 135 |
MS.gene051287.t1 | AT4G21350 | 30.347 | 346 | 227 | 9 | 78 | 420 | 5 | 339 | 5.09e-33 | 129 |
MS.gene051287.t1 | AT5G58680 | 34.545 | 275 | 170 | 7 | 180 | 451 | 72 | 339 | 4.69e-31 | 123 |
MS.gene051287.t1 | AT1G60190 | 27.342 | 395 | 252 | 14 | 80 | 450 | 280 | 663 | 1.85e-30 | 125 |
MS.gene051287.t1 | AT3G54790 | 36.406 | 217 | 133 | 5 | 232 | 446 | 495 | 708 | 8.84e-28 | 117 |
MS.gene051287.t1 | AT3G54790 | 49.333 | 75 | 38 | 0 | 70 | 144 | 194 | 268 | 1.12e-20 | 95.5 |
MS.gene051287.t1 | AT3G54790 | 36.406 | 217 | 133 | 5 | 232 | 446 | 531 | 744 | 9.47e-28 | 117 |
MS.gene051287.t1 | AT3G54790 | 49.333 | 75 | 38 | 0 | 70 | 144 | 230 | 304 | 1.48e-20 | 95.1 |
MS.gene051287.t1 | AT3G54790 | 36.406 | 217 | 133 | 5 | 232 | 446 | 531 | 744 | 9.47e-28 | 117 |
MS.gene051287.t1 | AT3G54790 | 49.333 | 75 | 38 | 0 | 70 | 144 | 230 | 304 | 1.48e-20 | 95.1 |
MS.gene051287.t1 | AT3G19380 | 28.056 | 360 | 222 | 14 | 72 | 407 | 8 | 354 | 1.09e-27 | 114 |
MS.gene051287.t1 | AT1G10560 | 26.718 | 393 | 258 | 14 | 80 | 450 | 290 | 674 | 7.81e-27 | 114 |
MS.gene051287.t1 | AT1G49780 | 26.303 | 403 | 262 | 11 | 72 | 450 | 8 | 399 | 1.28e-25 | 108 |
MS.gene051287.t1 | AT1G27910 | 27.526 | 287 | 142 | 9 | 79 | 307 | 280 | 558 | 1.09e-23 | 104 |
MS.gene051287.t1 | AT5G40140 | 27.477 | 222 | 158 | 2 | 231 | 450 | 286 | 506 | 4.96e-22 | 99.4 |
MS.gene051287.t1 | AT1G66160 | 53.623 | 69 | 32 | 0 | 76 | 144 | 31 | 99 | 4.34e-21 | 95.5 |
MS.gene051287.t1 | AT5G37490 | 48.148 | 81 | 42 | 0 | 76 | 156 | 29 | 109 | 1.25e-20 | 94.4 |
MS.gene051287.t1 | AT4G16490 | 30.851 | 282 | 184 | 7 | 173 | 450 | 187 | 461 | 1.70e-19 | 91.3 |
MS.gene051287.t1 | AT1G67530 | 47.297 | 74 | 39 | 0 | 79 | 152 | 273 | 346 | 1.96e-19 | 91.3 |
MS.gene051287.t1 | AT1G24330 | 47.222 | 72 | 38 | 0 | 79 | 150 | 276 | 347 | 1.97e-19 | 92.0 |
MS.gene051287.t1 | AT1G24330 | 47.222 | 72 | 38 | 0 | 79 | 150 | 276 | 347 | 1.97e-19 | 92.0 |
MS.gene051287.t1 | AT1G67530 | 47.297 | 74 | 39 | 0 | 79 | 152 | 273 | 346 | 2.31e-19 | 91.7 |
MS.gene051287.t1 | AT1G67530 | 47.297 | 74 | 39 | 0 | 79 | 152 | 273 | 346 | 2.31e-19 | 91.7 |
MS.gene051287.t1 | AT1G67530 | 47.297 | 74 | 39 | 0 | 79 | 152 | 273 | 346 | 2.31e-19 | 91.7 |
MS.gene051287.t1 | AT5G62560 | 29.091 | 220 | 150 | 4 | 231 | 446 | 292 | 509 | 2.71e-19 | 90.9 |
MS.gene051287.t1 | AT5G65200 | 26.882 | 279 | 186 | 6 | 180 | 447 | 235 | 506 | 2.32e-18 | 88.2 |
MS.gene051287.t1 | AT5G65920 | 25.588 | 340 | 197 | 11 | 78 | 414 | 60 | 346 | 3.76e-18 | 87.0 |
MS.gene051287.t1 | AT5G65920 | 25.588 | 340 | 197 | 11 | 78 | 414 | 60 | 346 | 3.76e-18 | 87.0 |
MS.gene051287.t1 | AT2G35930 | 25.357 | 280 | 197 | 6 | 72 | 345 | 6 | 279 | 7.23e-18 | 85.9 |
MS.gene051287.t1 | AT5G64660 | 45.714 | 70 | 38 | 0 | 76 | 145 | 8 | 77 | 2.19e-17 | 84.3 |
MS.gene051287.t1 | AT3G18710 | 45.946 | 74 | 40 | 0 | 76 | 149 | 10 | 83 | 3.92e-17 | 83.6 |
MS.gene051287.t1 | AT3G52450 | 44.595 | 74 | 40 | 1 | 72 | 144 | 1 | 74 | 5.44e-17 | 83.2 |
MS.gene051287.t1 | AT3G47820 | 26.838 | 272 | 186 | 7 | 185 | 449 | 221 | 486 | 1.78e-16 | 82.4 |
MS.gene051287.t1 | AT5G09800 | 46.377 | 69 | 37 | 0 | 77 | 145 | 10 | 78 | 8.12e-16 | 79.7 |
MS.gene051287.t1 | AT4G36550 | 42.308 | 78 | 45 | 0 | 75 | 152 | 216 | 293 | 1.11e-15 | 80.1 |
MS.gene051287.t1 | AT3G49810 | 24.920 | 313 | 180 | 8 | 78 | 387 | 64 | 324 | 7.81e-15 | 76.6 |
MS.gene051287.t1 | AT1G76390 | 23.562 | 365 | 223 | 13 | 62 | 384 | 10 | 360 | 1.11e-13 | 73.9 |
MS.gene051287.t1 | AT1G76390 | 23.562 | 365 | 223 | 13 | 62 | 384 | 10 | 360 | 1.11e-13 | 73.9 |
MS.gene051287.t1 | AT1G01680 | 43.077 | 65 | 37 | 0 | 80 | 144 | 235 | 299 | 5.13e-13 | 70.1 |
MS.gene051287.t1 | AT5G57035 | 35.000 | 100 | 65 | 0 | 58 | 157 | 688 | 787 | 7.50e-13 | 71.2 |
MS.gene051287.t1 | AT1G01660 | 40.909 | 66 | 39 | 0 | 79 | 144 | 499 | 564 | 9.26e-13 | 70.9 |
MS.gene051287.t1 | AT1G01660 | 40.909 | 66 | 39 | 0 | 79 | 144 | 498 | 563 | 9.58e-13 | 70.9 |
MS.gene051287.t1 | AT2G45910 | 34.862 | 109 | 69 | 1 | 36 | 144 | 723 | 829 | 1.76e-12 | 70.1 |
MS.gene051287.t1 | AT2G45910 | 34.862 | 109 | 69 | 1 | 36 | 144 | 723 | 829 | 1.76e-12 | 70.1 |
MS.gene051287.t1 | AT2G45920 | 30.952 | 126 | 71 | 2 | 28 | 144 | 273 | 391 | 2.90e-12 | 68.6 |
MS.gene051287.t1 | AT1G20780 | 22.255 | 337 | 227 | 9 | 80 | 384 | 25 | 358 | 4.60e-12 | 68.9 |
MS.gene051287.t1 | AT1G20780 | 22.255 | 337 | 227 | 9 | 80 | 384 | 25 | 358 | 4.60e-12 | 68.9 |
MS.gene051287.t1 | AT1G20780 | 22.255 | 337 | 227 | 9 | 80 | 384 | 25 | 358 | 4.60e-12 | 68.9 |
MS.gene051287.t1 | AT3G61390 | 40.909 | 66 | 39 | 0 | 79 | 144 | 279 | 344 | 8.87e-12 | 67.0 |
MS.gene051287.t1 | AT3G61390 | 40.909 | 66 | 39 | 0 | 79 | 144 | 354 | 419 | 1.13e-11 | 67.0 |
MS.gene051287.t1 | AT3G11840 | 44.286 | 70 | 37 | 2 | 76 | 144 | 8 | 76 | 1.36e-11 | 66.6 |
MS.gene051287.t1 | AT5G65500 | 39.394 | 66 | 40 | 0 | 79 | 144 | 716 | 781 | 1.43e-11 | 67.4 |
MS.gene051287.t1 | AT5G65500 | 39.394 | 66 | 40 | 0 | 79 | 144 | 724 | 789 | 1.46e-11 | 67.4 |
MS.gene051287.t1 | AT1G56040 | 41.538 | 65 | 38 | 0 | 79 | 143 | 354 | 418 | 3.77e-11 | 65.1 |
MS.gene051287.t1 | AT1G56030 | 41.538 | 65 | 38 | 0 | 79 | 143 | 324 | 388 | 5.45e-11 | 64.7 |
MS.gene051287.t1 | AT1G01670 | 27.972 | 143 | 91 | 2 | 12 | 144 | 136 | 276 | 8.68e-11 | 63.2 |
Find 75 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCTATCATTTCCCTTATA+AGG | 0.199602 | 7.3:-50744913 | None:intergenic |
TTACTCCAAATCACCTTATA+AGG | 0.206871 | 7.3:+50744900 | MS.gene051287:CDS |
GATCCTGTCATTGTTGCTTC+TGG | 0.279652 | 7.3:+50743550 | MS.gene051287:CDS |
CAACTCCTTCTTCAACTCTA+AGG | 0.282213 | 7.3:-50743326 | None:intergenic |
ATACTATCTCCTTCACAAAT+TGG | 0.282392 | 7.3:-50745166 | None:intergenic |
ATTTCCCTTATAAGGTGATT+TGG | 0.303420 | 7.3:-50744905 | None:intergenic |
TCACATCTTCTTGAAGTTCA+TGG | 0.317630 | 7.3:-50745192 | None:intergenic |
GATGGTTTAATGCTGGAAAT+AGG | 0.321814 | 7.3:+50744837 | MS.gene051287:CDS |
AGTGGACATTTGAATTCATC+TGG | 0.326095 | 7.3:-50743508 | None:intergenic |
GACTCAAACAAAGAACTTAT+AGG | 0.331498 | 7.3:+50745370 | MS.gene051287:CDS |
CGGTGCGGTTAGAGTGATTA+TGG | 0.334739 | 7.3:+50745522 | MS.gene051287:CDS |
AAAACCACTTATCGACCTAT+TGG | 0.362631 | 7.3:+50745408 | MS.gene051287:CDS |
ATCCAAGTTGAGGGAAATAA+AGG | 0.367050 | 7.3:+50745741 | MS.gene051287:CDS |
CAAATTGGCTTAAGCAATTG+AGG | 0.379491 | 7.3:-50745151 | None:intergenic |
AGGGATTCCCTTCTTCCAAT+AGG | 0.395833 | 7.3:-50745423 | None:intergenic |
TTCCTTTATTTCCCTCAACT+TGG | 0.403611 | 7.3:-50745743 | None:intergenic |
CTCCAAGCTCTGCCATTTCA+AGG | 0.408039 | 7.3:-50745621 | None:intergenic |
TGTCATTGTTGCTTCTGGTC+AGG | 0.408833 | 7.3:+50743555 | MS.gene051287:CDS |
CATAAAGACATATAGTTTGA+AGG | 0.418853 | 7.3:-50745714 | None:intergenic |
GAGCTCGTGTGAACGCAATA+AGG | 0.419696 | 7.3:+50745675 | MS.gene051287:CDS |
ATTCAAAGATGGTTTAATGC+TGG | 0.420712 | 7.3:+50744830 | MS.gene051287:CDS |
CTCAATGCCTTCATGAGGAT+TGG | 0.426057 | 7.3:-50745286 | None:intergenic |
CGCATAATGCTTAGCAAACA+AGG | 0.449211 | 7.3:-50745649 | None:intergenic |
CTAGTGCTGATAACGTGAAA+AGG | 0.450231 | 7.3:-50745348 | None:intergenic |
AGTTGAAGAAGGAGTTGAAG+AGG | 0.452412 | 7.3:+50743332 | MS.gene051287:CDS |
AGGATCTCTCATAAATTCCT+TGG | 0.453978 | 7.3:-50743533 | None:intergenic |
ATTAGTTACATTAGTGATGA+AGG | 0.459084 | 7.3:+50744974 | MS.gene051287:CDS |
TCAGAAGGCTGTCCTTGAAA+TGG | 0.461901 | 7.3:+50745609 | MS.gene051287:CDS |
GTCCTTGAAATGGCAGAGCT+TGG | 0.465269 | 7.3:+50745619 | MS.gene051287:CDS |
TACTCCAAATCACCTTATAA+GGG | 0.467565 | 7.3:+50744901 | MS.gene051287:CDS |
ATGAGGATTGGAATTACCAT+TGG | 0.468277 | 7.3:-50745274 | None:intergenic |
TTAAACCATCTTTGAATGAA+AGG | 0.473997 | 7.3:-50744824 | None:intergenic |
ATAGACCTTTCATTCAAAGA+TGG | 0.475990 | 7.3:+50744819 | MS.gene051287:CDS |
GCTTTCTTCAACATAACCTC+TGG | 0.479400 | 7.3:-50743304 | None:intergenic |
CTCATAAATTCCTTGGAAAG+TGG | 0.479852 | 7.3:-50743526 | None:intergenic |
GAGAGAACTTGATGAGTTTG+AGG | 0.482799 | 7.3:-50744866 | None:intergenic |
CCTTCTGATGAGTAGAAAGT+AGG | 0.485382 | 7.3:-50745594 | None:intergenic |
AGCAACATCCTTCATAGCTA+AGG | 0.487743 | 7.3:-50745443 | None:intergenic |
AGGGAATCCCTTAGCTATGA+AGG | 0.488930 | 7.3:+50745435 | MS.gene051287:CDS |
ATCATAAACATGGCAAAACC+AGG | 0.492884 | 7.3:+50743265 | None:intergenic |
GAAAGCCTTAGAGTTGAAGA+AGG | 0.502406 | 7.3:+50743321 | MS.gene051287:CDS |
GTGATTCGTCGACGTGAACT+CGG | 0.504524 | 7.3:-50745558 | None:intergenic |
TGTCATGAATCGAGATATTG+AGG | 0.522241 | 7.3:-50745225 | None:intergenic |
GAAAAGGGTTGCTGCAGCGT+TGG | 0.522819 | 7.3:-50745332 | None:intergenic |
ATTCAAATGTCCACTTTCCA+AGG | 0.523076 | 7.3:+50743516 | MS.gene051287:CDS |
CTTATCGACCTATTGGAAGA+AGG | 0.525172 | 7.3:+50745415 | MS.gene051287:CDS |
GTTGAGGGAAATAAAGGAAG+AGG | 0.528465 | 7.3:+50745747 | MS.gene051287:CDS |
TCTTCCAATAGGTCGATAAG+TGG | 0.532091 | 7.3:-50745412 | None:intergenic |
GATTTGGAGTAAGCAGAGTG+TGG | 0.532624 | 7.3:-50744889 | None:intergenic |
TAGTGCTGATAACGTGAAAA+GGG | 0.532860 | 7.3:-50745347 | None:intergenic |
TGACCAGAAGCAACAATGAC+AGG | 0.534069 | 7.3:-50743553 | None:intergenic |
TTATGATAGATCCAAGTTGA+GGG | 0.541455 | 7.3:+50745732 | MS.gene051287:CDS |
ATTTGGAGTAAGCAGAGTGT+GGG | 0.550004 | 7.3:-50744888 | None:intergenic |
AATTCTTGAGAGATTGCATA+GGG | 0.552673 | 7.3:+50745840 | MS.gene051287:CDS |
TTTATGATAGATCCAAGTTG+AGG | 0.556104 | 7.3:+50745731 | MS.gene051287:CDS |
TTGCTTAAGCCAATTTGTGA+AGG | 0.557316 | 7.3:+50745157 | MS.gene051287:CDS |
TTATCGACCTATTGGAAGAA+GGG | 0.563909 | 7.3:+50745416 | MS.gene051287:CDS |
CTTCTGATGAGTAGAAAGTA+GGG | 0.564541 | 7.3:-50745593 | None:intergenic |
GGTAATTCCAATCCTCATGA+AGG | 0.566880 | 7.3:+50745279 | MS.gene051287:CDS |
GCAACATCCTTCATAGCTAA+GGG | 0.568346 | 7.3:-50745442 | None:intergenic |
GGATCAGAATCTAACACCCC+TGG | 0.581678 | 7.3:-50743283 | None:intergenic |
GTGGACATTTGAATTCATCT+GGG | 0.582625 | 7.3:-50743507 | None:intergenic |
CCTACTTTCTACTCATCAGA+AGG | 0.582674 | 7.3:+50745594 | MS.gene051287:CDS |
CTCATGAAGGCATTGAGATG+TGG | 0.589595 | 7.3:+50745292 | MS.gene051287:CDS |
TATATCTTCATCATCAACAA+TGG | 0.598977 | 7.3:-50743365 | None:intergenic |
CACATCTCAATGCCTTCATG+AGG | 0.603776 | 7.3:-50745291 | None:intergenic |
GAATTCTTGAGAGATTGCAT+AGG | 0.617412 | 7.3:+50745839 | MS.gene051287:CDS |
ACAAGTAGCTGAAATTCCAA+TGG | 0.625745 | 7.3:+50745258 | MS.gene051287:CDS |
GGTGTTAGATTCTGATCCAG+AGG | 0.628475 | 7.3:+50743288 | MS.gene051287:CDS |
TCATAAACATGGCAAAACCA+GGG | 0.631769 | 7.3:+50743266 | None:intergenic |
GATGAGTAGAAAGTAGGGCA+AGG | 0.637340 | 7.3:-50745588 | None:intergenic |
AGGGCTAAGAGAAAAGCTAG+TGG | 0.642044 | 7.3:+50745817 | MS.gene051287:CDS |
AAAGCAATAGCAGTGAAAGA+CGG | 0.662494 | 7.3:+50745502 | MS.gene051287:CDS |
CATAAACATGGCAAAACCAG+GGG | 0.671437 | 7.3:+50743267 | None:intergenic |
AATAGCAGTGAAAGACGGTG+CGG | 0.724317 | 7.3:+50745507 | MS.gene051287:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTGAATTAAAATTAACTAA+AGG | + | chr7.3:50743839-50743858 | MS.gene051287:intron | 10.0% |
!! | TATATAAATAAATTCAGAAA+AGG | - | chr7.3:50744188-50744207 | None:intergenic | 10.0% |
!! | TTGAATTAAAATTAACTAAA+GGG | + | chr7.3:50743840-50743859 | MS.gene051287:intron | 10.0% |
!!! | TATTTTTTTTTTTTTTTTGG+TGG | + | chr7.3:50744577-50744596 | MS.gene051287:intron | 10.0% |
!! | TATAGAAATATACATTTCTA+AGG | - | chr7.3:50744012-50744031 | None:intergenic | 15.0% |
!! | TTCATTAATTATCATACATT+AGG | + | chr7.3:50743763-50743782 | MS.gene051287:intron | 15.0% |
!!! | AAGGAAAAAAAAATCTATTT+TGG | - | chr7.3:50744092-50744111 | None:intergenic | 15.0% |
!!! | TTTATATTGTTTACCTTTTA+TGG | + | chr7.3:50744543-50744562 | MS.gene051287:intron | 15.0% |
!! | AAAAATGGTCTAAAAATCAA+GGG | + | chr7.3:50744933-50744952 | MS.gene051287:CDS | 20.0% |
!! | AATAATGACTTCAAACAAAT+TGG | + | chr7.3:50744495-50744514 | MS.gene051287:intron | 20.0% |
!! | ATAAAAAATCCATTTCTGTT+AGG | - | chr7.3:50743808-50743827 | None:intergenic | 20.0% |
!! | TATCATACATTAGGAAAAAT+GGG | + | chr7.3:50743772-50743791 | MS.gene051287:intron | 20.0% |
!! | TATCATGTATTAACCATAAA+AGG | - | chr7.3:50744559-50744578 | None:intergenic | 20.0% |
!! | TATTATTACTGAGAAAATGT+TGG | + | chr7.3:50743647-50743666 | MS.gene051287:intron | 20.0% |
!! | TCTAATAATCACAAATTGTT+CGG | + | chr7.3:50744630-50744649 | MS.gene051287:intron | 20.0% |
!! | TTATCATACATTAGGAAAAA+TGG | + | chr7.3:50743771-50743790 | MS.gene051287:intron | 20.0% |
!!! | ATACATGATATTTTAACAAG+TGG | + | chr7.3:50744607-50744626 | MS.gene051287:intron | 20.0% |
!!! | GATATATAAGATATTGATTC+TGG | + | chr7.3:50743868-50743887 | MS.gene051287:intron | 20.0% |
!!! | GTTTTTTTTTACTTAACCAT+CGG | - | chr7.3:50744757-50744776 | None:intergenic | 20.0% |
!!! | TTTTTTTTTACTTAACCATC+GGG | - | chr7.3:50744756-50744775 | None:intergenic | 20.0% |
! | ATATATAATGTGTGTGTAGA+TGG | + | chr7.3:50744205-50744224 | MS.gene051287:intron | 25.0% |
! | ATTAAACAACAAAAACAGGA+AGG | - | chr7.3:50744111-50744130 | None:intergenic | 25.0% |
! | ATTAGTTACATTAGTGATGA+AGG | + | chr7.3:50744974-50744993 | MS.gene051287:CDS | 25.0% |
! | CATAAAGACATATAGTTTGA+AGG | - | chr7.3:50745717-50745736 | None:intergenic | 25.0% |
! | CTAATAATCACAAATTGTTC+GGG | + | chr7.3:50744631-50744650 | MS.gene051287:intron | 25.0% |
! | CTATAAGTCATTTCATTGTT+TGG | + | chr7.3:50744027-50744046 | MS.gene051287:intron | 25.0% |
! | GAAAAATGGTCTAAAAATCA+AGG | + | chr7.3:50744932-50744951 | MS.gene051287:CDS | 25.0% |
! | TAAAATGTTCCTAACAGAAA+TGG | + | chr7.3:50743796-50743815 | MS.gene051287:intron | 25.0% |
! | TAAGGGAAATGATAGAAAAA+TGG | + | chr7.3:50744918-50744937 | MS.gene051287:CDS | 25.0% |
! | TATATCTTCATCATCAACAA+TGG | - | chr7.3:50743368-50743387 | None:intergenic | 25.0% |
! | TTAAACCATCTTTGAATGAA+AGG | - | chr7.3:50744827-50744846 | None:intergenic | 25.0% |
! | TTGGTACTTTATTCTATGTT+TGG | + | chr7.3:50743925-50743944 | MS.gene051287:intron | 25.0% |
! | TTTCTATCATTTCCCTTATA+AGG | - | chr7.3:50744916-50744935 | None:intergenic | 25.0% |
!! | AAACAAATTGGAGATTTTTC+TGG | + | chr7.3:50744507-50744526 | MS.gene051287:intron | 25.0% |
!! | AAGGCATCAATGTTAAAATT+GGG | - | chr7.3:50744392-50744411 | None:intergenic | 25.0% |
!! | ACAATACATGACATTTTTGT+TGG | + | chr7.3:50744775-50744794 | MS.gene051287:intron | 25.0% |
!!! | TAAGATATTGATTCTGGTTT+TGG | + | chr7.3:50743874-50743893 | MS.gene051287:intron | 25.0% |
!!! | TTTGACTGATTTTCTCAAAA+GGG | + | chr7.3:50744327-50744346 | MS.gene051287:intron | 25.0% |
!!! | TTTTGACTGATTTTCTCAAA+AGG | + | chr7.3:50744326-50744345 | MS.gene051287:intron | 25.0% |
AATTCTTGAGAGATTGCATA+GGG | + | chr7.3:50745840-50745859 | MS.gene051287:CDS | 30.0% | |
ATACTATCTCCTTCACAAAT+TGG | - | chr7.3:50745169-50745188 | None:intergenic | 30.0% | |
ATAGACCTTTCATTCAAAGA+TGG | + | chr7.3:50744819-50744838 | MS.gene051287:CDS | 30.0% | |
ATTCAAAGATGGTTTAATGC+TGG | + | chr7.3:50744830-50744849 | MS.gene051287:CDS | 30.0% | |
ATTTCCCTTATAAGGTGATT+TGG | - | chr7.3:50744908-50744927 | None:intergenic | 30.0% | |
ATTTCTGAACTTGCAAAAAG+TGG | + | chr7.3:50745787-50745806 | MS.gene051287:CDS | 30.0% | |
CAATGTTAAAATTGGGAGAA+AGG | - | chr7.3:50744385-50744404 | None:intergenic | 30.0% | |
GACTCAAACAAAGAACTTAT+AGG | + | chr7.3:50745370-50745389 | MS.gene051287:CDS | 30.0% | |
GAGAAAATGTTGGAAACATA+AGG | + | chr7.3:50743657-50743676 | MS.gene051287:intron | 30.0% | |
GAGCATTAAACAACAAAAAC+AGG | - | chr7.3:50744115-50744134 | None:intergenic | 30.0% | |
TACTCCAAATCACCTTATAA+GGG | + | chr7.3:50744901-50744920 | MS.gene051287:CDS | 30.0% | |
TTACTCCAAATCACCTTATA+AGG | + | chr7.3:50744900-50744919 | MS.gene051287:CDS | 30.0% | |
TTTATGATAGATCCAAGTTG+AGG | + | chr7.3:50745731-50745750 | MS.gene051287:CDS | 30.0% | |
! | GAGAAAAGAAAAGGTAGTTT+TGG | - | chr7.3:50744420-50744439 | None:intergenic | 30.0% |
! | TATCTCTTTTGCTGGAATTT+TGG | + | chr7.3:50743906-50743925 | MS.gene051287:intron | 30.0% |
! | TTATGATAGATCCAAGTTGA+GGG | + | chr7.3:50745732-50745751 | MS.gene051287:CDS | 30.0% |
! | TTTTTGTCTATCTCTTTTGC+TGG | + | chr7.3:50743898-50743917 | MS.gene051287:intron | 30.0% |
!! | CAAAAAAGTACTCGAAAACA+AGG | - | chr7.3:50745112-50745131 | None:intergenic | 30.0% |
!! | CTGGTAATCCAAAGTTTTAT+CGG | - | chr7.3:50744713-50744732 | None:intergenic | 30.0% |
!! | GAAGGCATCAATGTTAAAAT+TGG | - | chr7.3:50744393-50744412 | None:intergenic | 30.0% |
!!! | AAAAGAAAAGGTAGTTTTGG+TGG | - | chr7.3:50744417-50744436 | None:intergenic | 30.0% |
!!! | AAAGAAAAGGTAGTTTTGGT+GGG | - | chr7.3:50744416-50744435 | None:intergenic | 30.0% |
AAAACCACTTATCGACCTAT+TGG | + | chr7.3:50745408-50745427 | MS.gene051287:CDS | 35.0% | |
AAAGCAATAGCAGTGAAAGA+CGG | + | chr7.3:50745502-50745521 | MS.gene051287:CDS | 35.0% | |
AACTCGAGTTTGAATCTTGA+TGG | + | chr7.3:50744656-50744675 | MS.gene051287:intron | 35.0% | |
AATAGTTCTTGGTCTGACTA+TGG | + | chr7.3:50744680-50744699 | MS.gene051287:intron | 35.0% | |
ACAAGTAGCTGAAATTCCAA+TGG | + | chr7.3:50745258-50745277 | MS.gene051287:CDS | 35.0% | |
ACTCGAGTTTGAATCTTGAT+GGG | + | chr7.3:50744657-50744676 | MS.gene051287:intron | 35.0% | |
AGGATCTCTCATAAATTCCT+TGG | - | chr7.3:50743536-50743555 | None:intergenic | 35.0% | |
AGGTGTGGTAAAGATAGAAA+AGG | + | chr7.3:50743957-50743976 | MS.gene051287:intron | 35.0% | |
AGTGAGACAGAGAAAAGAAA+AGG | - | chr7.3:50744429-50744448 | None:intergenic | 35.0% | |
AGTGGACATTTGAATTCATC+TGG | - | chr7.3:50743511-50743530 | None:intergenic | 35.0% | |
ATCTTGATGGGAATAGTTCT+TGG | + | chr7.3:50744669-50744688 | MS.gene051287:intron | 35.0% | |
ATGAGGATTGGAATTACCAT+TGG | - | chr7.3:50745277-50745296 | None:intergenic | 35.0% | |
ATTCAAATGTCCACTTTCCA+AGG | + | chr7.3:50743516-50743535 | MS.gene051287:CDS | 35.0% | |
CTATCTTTACCACACCTTTA+TGG | - | chr7.3:50743954-50743973 | None:intergenic | 35.0% | |
CTCATAAATTCCTTGGAAAG+TGG | - | chr7.3:50743529-50743548 | None:intergenic | 35.0% | |
CTTCTGATGAGTAGAAAGTA+GGG | - | chr7.3:50745596-50745615 | None:intergenic | 35.0% | |
GAATTCTTGAGAGATTGCAT+AGG | + | chr7.3:50745839-50745858 | MS.gene051287:CDS | 35.0% | |
GATGGTTTAATGCTGGAAAT+AGG | + | chr7.3:50744837-50744856 | MS.gene051287:CDS | 35.0% | |
GTGGACATTTGAATTCATCT+GGG | - | chr7.3:50743510-50743529 | None:intergenic | 35.0% | |
TAGATGGAAAGAGAAAGAGT+GGG | + | chr7.3:50744221-50744240 | MS.gene051287:intron | 35.0% | |
TCACATCTTCTTGAAGTTCA+TGG | - | chr7.3:50745195-50745214 | None:intergenic | 35.0% | |
TCAGGTTAGTGTCACAAATT+TGG | + | chr7.3:50743573-50743592 | MS.gene051287:intron | 35.0% | |
TGCAAAAAGTGGAACTTCAA+GGG | + | chr7.3:50745798-50745817 | MS.gene051287:CDS | 35.0% | |
TGTCATGAATCGAGATATTG+AGG | - | chr7.3:50745228-50745247 | None:intergenic | 35.0% | |
TTATCGACCTATTGGAAGAA+GGG | + | chr7.3:50745416-50745435 | MS.gene051287:CDS | 35.0% | |
TTGCAAAAAGTGGAACTTCA+AGG | + | chr7.3:50745797-50745816 | MS.gene051287:CDS | 35.0% | |
TTGCTTAAGCCAATTTGTGA+AGG | + | chr7.3:50745157-50745176 | MS.gene051287:CDS | 35.0% | |
! | ATCCAAGTTGAGGGAAATAA+AGG | + | chr7.3:50745741-50745760 | MS.gene051287:CDS | 35.0% |
! | CAAATTGGCTTAAGCAATTG+AGG | - | chr7.3:50745154-50745173 | None:intergenic | 35.0% |
! | TCTATGTTTGGTGACCATAA+AGG | + | chr7.3:50743937-50743956 | MS.gene051287:intron | 35.0% |
! | TTCCTTTATTTCCCTCAACT+TGG | - | chr7.3:50745746-50745765 | None:intergenic | 35.0% |
!! | TAATCCAAAGTTTTATCGGC+AGG | - | chr7.3:50744709-50744728 | None:intergenic | 35.0% |
!! | TAGGTCGATAAGTGGTTTTA+AGG | - | chr7.3:50745407-50745426 | None:intergenic | 35.0% |
!! | TAGTGCTGATAACGTGAAAA+GGG | - | chr7.3:50745350-50745369 | None:intergenic | 35.0% |
!!! | AAGAAAAGGTAGTTTTGGTG+GGG | - | chr7.3:50744415-50744434 | None:intergenic | 35.0% |
ACTTAACCATCGGGTTTCTA+GGG | - | chr7.3:50744747-50744766 | None:intergenic | 40.0% | |
AGCAACATCCTTCATAGCTA+AGG | - | chr7.3:50745446-50745465 | None:intergenic | 40.0% | |
AGTTGAAGAAGGAGTTGAAG+AGG | + | chr7.3:50743332-50743351 | MS.gene051287:CDS | 40.0% | |
CAACTCCTTCTTCAACTCTA+AGG | - | chr7.3:50743329-50743348 | None:intergenic | 40.0% | |
CCTACTTTCTACTCATCAGA+AGG | + | chr7.3:50745594-50745613 | MS.gene051287:CDS | 40.0% | |
CCTTCTGATGAGTAGAAAGT+AGG | - | chr7.3:50745597-50745616 | None:intergenic | 40.0% | |
CGCATAATGCTTAGCAAACA+AGG | - | chr7.3:50745652-50745671 | None:intergenic | 40.0% | |
CTTATCGACCTATTGGAAGA+AGG | + | chr7.3:50745415-50745434 | MS.gene051287:CDS | 40.0% | |
GAAAGCCTTAGAGTTGAAGA+AGG | + | chr7.3:50743321-50743340 | MS.gene051287:CDS | 40.0% | |
GAGAGAACTTGATGAGTTTG+AGG | - | chr7.3:50744869-50744888 | None:intergenic | 40.0% | |
GCAACATCCTTCATAGCTAA+GGG | - | chr7.3:50745445-50745464 | None:intergenic | 40.0% | |
GCTTTCTTCAACATAACCTC+TGG | - | chr7.3:50743307-50743326 | None:intergenic | 40.0% | |
GGTAATTCCAATCCTCATGA+AGG | + | chr7.3:50745279-50745298 | MS.gene051287:CDS | 40.0% | |
GTAGATGGAAAGAGAAAGAG+TGG | + | chr7.3:50744220-50744239 | MS.gene051287:intron | 40.0% | |
GTTACCTGCCGATAAAACTT+TGG | + | chr7.3:50744702-50744721 | MS.gene051287:intron | 40.0% | |
GTTGAGGGAAATAAAGGAAG+AGG | + | chr7.3:50745747-50745766 | MS.gene051287:CDS | 40.0% | |
TACTTAACCATCGGGTTTCT+AGG | - | chr7.3:50744748-50744767 | None:intergenic | 40.0% | |
TCTTCCAATAGGTCGATAAG+TGG | - | chr7.3:50745415-50745434 | None:intergenic | 40.0% | |
! | ATTTGGAGTAAGCAGAGTGT+GGG | - | chr7.3:50744891-50744910 | None:intergenic | 40.0% |
!! | CTAGTGCTGATAACGTGAAA+AGG | - | chr7.3:50745351-50745370 | None:intergenic | 40.0% |
!!! | GATAAGTGGTTTTAAGGCGT+TGG | - | chr7.3:50745401-50745420 | None:intergenic | 40.0% |
AATAGCAGTGAAAGACGGTG+CGG | + | chr7.3:50745507-50745526 | MS.gene051287:CDS | 45.0% | |
AGACACTCTTGAGTGAGTAG+TGG | + | chr7.3:50744278-50744297 | MS.gene051287:intron | 45.0% | |
AGGGAATCCCTTAGCTATGA+AGG | + | chr7.3:50745435-50745454 | MS.gene051287:CDS | 45.0% | |
AGGGATTCCCTTCTTCCAAT+AGG | - | chr7.3:50745426-50745445 | None:intergenic | 45.0% | |
AGGGCTAAGAGAAAAGCTAG+TGG | + | chr7.3:50745817-50745836 | MS.gene051287:CDS | 45.0% | |
CACATCTCAATGCCTTCATG+AGG | - | chr7.3:50745294-50745313 | None:intergenic | 45.0% | |
CTCAATGCCTTCATGAGGAT+TGG | - | chr7.3:50745289-50745308 | None:intergenic | 45.0% | |
GATGAGTAGAAAGTAGGGCA+AGG | - | chr7.3:50745591-50745610 | None:intergenic | 45.0% | |
GGTGTTAGATTCTGATCCAG+AGG | + | chr7.3:50743288-50743307 | MS.gene051287:CDS | 45.0% | |
TCAGAAGGCTGTCCTTGAAA+TGG | + | chr7.3:50745609-50745628 | MS.gene051287:CDS | 45.0% | |
TGACCAGAAGCAACAATGAC+AGG | - | chr7.3:50743556-50743575 | None:intergenic | 45.0% | |
! | CTTAACCATCGGGTTTCTAG+GGG | - | chr7.3:50744746-50744765 | None:intergenic | 45.0% |
! | GATCCTGTCATTGTTGCTTC+TGG | + | chr7.3:50743550-50743569 | MS.gene051287:CDS | 45.0% |
! | GATTTGGAGTAAGCAGAGTG+TGG | - | chr7.3:50744892-50744911 | None:intergenic | 45.0% |
! | GTTTGGTGACCATAAAGGTG+TGG | + | chr7.3:50743942-50743961 | MS.gene051287:intron | 45.0% |
! | TGTCATTGTTGCTTCTGGTC+AGG | + | chr7.3:50743555-50743574 | MS.gene051287:CDS | 45.0% |
!! | CTCATGAAGGCATTGAGATG+TGG | + | chr7.3:50745292-50745311 | MS.gene051287:CDS | 45.0% |
!!! | AAAGGTAGTTTTGGTGGGGA+AGG | - | chr7.3:50744411-50744430 | None:intergenic | 45.0% |
!! | TAATTAAATTTCATTAAAAT+TGG | + | chr7.3:50743690-50743709 | MS.gene051287:intron | 5.0% |
!!! | TGATATTTTTTTTTTTTTTT+TGG | + | chr7.3:50744574-50744593 | MS.gene051287:intron | 5.0% |
CACTCTTGAGTGAGTAGTGG+TGG | + | chr7.3:50744281-50744300 | MS.gene051287:intron | 50.0% | |
CGGTGCGGTTAGAGTGATTA+TGG | + | chr7.3:50745522-50745541 | MS.gene051287:CDS | 50.0% | |
GAGCTCGTGTGAACGCAATA+AGG | + | chr7.3:50745675-50745694 | MS.gene051287:CDS | 50.0% | |
GGATCAGAATCTAACACCCC+TGG | - | chr7.3:50743286-50743305 | None:intergenic | 50.0% | |
GTCCTTGAAATGGCAGAGCT+TGG | + | chr7.3:50745619-50745638 | MS.gene051287:CDS | 50.0% | |
GTGATTCGTCGACGTGAACT+CGG | - | chr7.3:50745561-50745580 | None:intergenic | 50.0% | |
! | ATCGGGTTTCTAGGGGACAA+GGG | - | chr7.3:50744739-50744758 | None:intergenic | 50.0% |
! | CTCCAAGCTCTGCCATTTCA+AGG | - | chr7.3:50745624-50745643 | None:intergenic | 50.0% |
CTTGTCCCCTAGAAACCCGA+TGG | + | chr7.3:50744738-50744757 | MS.gene051287:intron | 55.0% | |
GAAAAGGGTTGCTGCAGCGT+TGG | - | chr7.3:50745335-50745354 | None:intergenic | 55.0% | |
! | CATCGGGTTTCTAGGGGACA+AGG | - | chr7.3:50744740-50744759 | None:intergenic | 55.0% |
! | TCGGGTTTCTAGGGGACAAG+GGG | - | chr7.3:50744738-50744757 | None:intergenic | 55.0% |
! | TTCTAGGGGACAAGGGGCTC+TGG | - | chr7.3:50744732-50744751 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 50743274 | 50745888 | 50743274 | ID=MS.gene051287 |
chr7.3 | mRNA | 50743274 | 50745888 | 50743274 | ID=MS.gene051287.t1;Parent=MS.gene051287 |
chr7.3 | exon | 50743274 | 50743576 | 50743274 | ID=MS.gene051287.t1.exon1;Parent=MS.gene051287.t1 |
chr7.3 | CDS | 50743274 | 50743576 | 50743274 | ID=cds.MS.gene051287.t1;Parent=MS.gene051287.t1 |
chr7.3 | exon | 50744812 | 50745888 | 50744812 | ID=MS.gene051287.t1.exon2;Parent=MS.gene051287.t1 |
chr7.3 | CDS | 50744812 | 50745888 | 50744812 | ID=cds.MS.gene051287.t1;Parent=MS.gene051287.t1 |
Gene Sequence |
Protein sequence |