Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051329.t1 | XP_013457224.1 | 99.2 | 482 | 4 | 0 | 1 | 482 | 1 | 482 | 7.80E-289 | 1002.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051329.t1 | Q9CWH5 | 38.2 | 471 | 251 | 10 | 3 | 462 | 10 | 451 | 3.9e-87 | 323.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051329.t1 | A0A072UZG5 | 99.2 | 482 | 4 | 0 | 1 | 482 | 1 | 482 | 5.6e-289 | 1002.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051329 | MS.gene056257 | 0.818964 | 1.49E-52 | -1.69E-46 |
| MS.gene051329 | MS.gene058030 | 0.832527 | 8.98E-56 | -1.69E-46 |
| MS.gene051329 | MS.gene35047 | 0.944581 | 1.50E-103 | -1.69E-46 |
| MS.gene051329 | MS.gene48376 | 0.802329 | 5.91E-49 | -1.69E-46 |
| MS.gene051329 | MS.gene58439 | 0.805693 | 1.18E-49 | -1.69E-46 |
| MS.gene051329 | MS.gene65812 | -0.807056 | 6.09E-50 | -1.69E-46 |
| MS.gene051329 | MS.gene68170 | 0.805628 | 1.22E-49 | -1.69E-46 |
| MS.gene051329 | MS.gene68766 | 0.809615 | 1.73E-50 | -1.69E-46 |
| MS.gene051329 | MS.gene70397 | 0.926616 | 3.67E-91 | -1.69E-46 |
| MS.gene051329 | MS.gene79881 | 0.862821 | 3.86E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051329.t1 | MTR_4g094315 | 99.170 | 482 | 4 | 0 | 1 | 482 | 1 | 482 | 0.0 | 991 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051329.t1 | AT3G26410 | 73.444 | 482 | 123 | 2 | 1 | 482 | 1 | 477 | 0.0 | 751 |
Find 136 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGCAACACCTTGAATTTA+AGG | 0.147556 | 4.1:+19324610 | MS.gene051329:CDS |
| TGGAATCTAACAGCACTTTC+AGG | 0.261458 | 4.1:+19321319 | MS.gene051329:CDS |
| ATCAAAAGCTCCAAACAATT+TGG | 0.282090 | 4.1:-19320800 | None:intergenic |
| GAATGGCGATTATAAGATTA+AGG | 0.285901 | 4.1:+19324709 | MS.gene051329:CDS |
| CTTGTTGCAGCAGCTCATTT+TGG | 0.299821 | 4.1:+19322782 | MS.gene051329:CDS |
| TCCAGTGGATGCTCAGTTAA+AGG | 0.304687 | 4.1:+19324685 | MS.gene051329:CDS |
| AGGATTACTGTTGATACCTT+TGG | 0.304749 | 4.1:+19321339 | MS.gene051329:CDS |
| CTCTTTCAGCCCCGGACGCC+AGG | 0.306574 | 4.1:-19323280 | None:intergenic |
| GGGGATGAACGTCGTCGTTT+TGG | 0.306689 | 4.1:-19320828 | None:intergenic |
| ACCAAATGGAAAGGAGAATC+TGG | 0.336337 | 4.1:-19320883 | None:intergenic |
| TTGGCTAAAGATTCGACTTC+GGG | 0.336501 | 4.1:-19320781 | None:intergenic |
| TTGAAAAGCCGTACTTATCT+TGG | 0.337225 | 4.1:+19322656 | MS.gene051329:CDS |
| ATAATATGTGACCCTCCTTA+TGG | 0.341218 | 4.1:+19324227 | MS.gene051329:CDS |
| AGCTTAAAACATGGATGCTC+CGG | 0.349016 | 4.1:-19324485 | None:intergenic |
| AACCTTCCTCCCTGGCGTCC+GGG | 0.349511 | 4.1:+19323270 | MS.gene051329:CDS |
| TTCTTAGTTCACGATATTGC+AGG | 0.351630 | 4.1:+19324528 | MS.gene051329:CDS |
| CAACCTTCCTCCCTGGCGTC+CGG | 0.354356 | 4.1:+19323269 | MS.gene051329:CDS |
| CCCAGATTCTCCTTTCCATT+TGG | 0.355570 | 4.1:+19320882 | MS.gene051329:CDS |
| GAAAACCAGAGCACAACTTC+TGG | 0.364397 | 4.1:+19322516 | MS.gene051329:CDS |
| CATCTTCTAGCCACTTTACA+TGG | 0.371871 | 4.1:-19324637 | None:intergenic |
| GAATCTTTAGCCAAATTGTT+TGG | 0.372629 | 4.1:+19320790 | MS.gene051329:CDS |
| AGGGTGCTGACATTGACATT+AGG | 0.374088 | 4.1:+19322980 | MS.gene051329:intron |
| TATGGCAACTTTCTCTCATC+TGG | 0.376539 | 4.1:-19321294 | None:intergenic |
| CGAGCCGGAGGACGCAAATC+TGG | 0.377832 | 4.1:+19324254 | MS.gene051329:CDS |
| GGGTGCTGACATTGACATTA+GGG | 0.379288 | 4.1:+19322981 | MS.gene051329:intron |
| TAAAATTACTCCAAACATTA+CGG | 0.379933 | 4.1:-19323029 | None:intergenic |
| GCTGCCAAGATGCTTGTATT+GGG | 0.380400 | 4.1:+19324401 | MS.gene051329:CDS |
| TGCTGCCAAGATGCTTGTAT+TGG | 0.383669 | 4.1:+19324400 | MS.gene051329:CDS |
| GTGCTGTTAGATTCCAAGTA+TGG | 0.387116 | 4.1:-19321312 | None:intergenic |
| GGATTACTGTTGATACCTTT+GGG | 0.387647 | 4.1:+19321340 | MS.gene051329:CDS |
| GATAATTGTGAAGGTAATAA+TGG | 0.389973 | 4.1:+19322551 | MS.gene051329:CDS |
| GAGGGAGCTTCCATTGCAAC+TGG | 0.392144 | 4.1:-19320849 | None:intergenic |
| CATGGTTATCCTTAAATTCA+AGG | 0.394191 | 4.1:-19324619 | None:intergenic |
| TTACACAGAGGAAATAAGTT+TGG | 0.394825 | 4.1:+19324580 | MS.gene051329:CDS |
| TTGTCGTCCGGAACAATGTA+AGG | 0.408258 | 4.1:-19324308 | None:intergenic |
| TGTGGAGCCTTACATTGTTC+CGG | 0.409333 | 4.1:+19324301 | MS.gene051329:CDS |
| TGTATGAGCTATGGGGTGAA+GGG | 0.410913 | 4.1:+19321232 | MS.gene051329:CDS |
| AAACTTATTTCCTCTGTGTA+AGG | 0.415891 | 4.1:-19324578 | None:intergenic |
| GTTCACTTATATCCCTTTCA+AGG | 0.417672 | 4.1:+19321404 | MS.gene051329:CDS |
| GTCTCCACATAATCATTTCC+CGG | 0.424080 | 4.1:+19324466 | MS.gene051329:CDS |
| TGCTGCAACAAGAATACTTC+CGG | 0.424884 | 4.1:-19322771 | None:intergenic |
| CAACCAAGCACTGGCTACTC+CGG | 0.428014 | 4.1:+19322718 | MS.gene051329:CDS |
| ATACTTCCGGTTCCAACAAA+AGG | 0.429546 | 4.1:-19322758 | None:intergenic |
| GCGGTCCTGACCGTAATGTT+TGG | 0.431493 | 4.1:+19323019 | MS.gene051329:CDS |
| AGGAAATAAGTTTGGCAGCT+AGG | 0.434880 | 4.1:+19324588 | MS.gene051329:CDS |
| ATGTATGAGCTATGGGGTGA+AGG | 0.439043 | 4.1:+19321231 | MS.gene051329:CDS |
| GGTGGTAGGAAGCTACTAAA+GGG | 0.441482 | 4.1:+19324275 | MS.gene051329:CDS |
| AACCAAGCACTGGCTACTCC+GGG | 0.444181 | 4.1:+19322719 | MS.gene051329:CDS |
| TCCTTTAACTGAGCATCCAC+TGG | 0.446225 | 4.1:-19324686 | None:intergenic |
| TGAGAGAAAGTTGCCATACT+TGG | 0.448763 | 4.1:+19321299 | MS.gene051329:CDS |
| CTGAAGGGAGATTGACCAAA+TGG | 0.448856 | 4.1:-19320897 | None:intergenic |
| GAATGAGTTCCTTATGCTCC+TGG | 0.450036 | 4.1:-19321377 | None:intergenic |
| GTGAAGTTGGTGCTGCTGAT+AGG | 0.451208 | 4.1:+19322612 | MS.gene051329:CDS |
| GGGTAGCTATGAGGAGTTGA+AGG | 0.451262 | 4.1:+19321254 | MS.gene051329:CDS |
| ATCAGCCAGAAGTTGTGCTC+TGG | 0.451410 | 4.1:-19322521 | None:intergenic |
| TGGGAAGGTTATTAGTCTCC+AGG | 0.454971 | 4.1:+19321359 | MS.gene051329:CDS |
| TCCCCGGAGTAGCCAGTGCT+TGG | 0.456610 | 4.1:-19322721 | None:intergenic |
| GACTCTTCTTCTCTCAATAC+AGG | 0.466540 | 4.1:-19324446 | None:intergenic |
| TGAAAAGCCGTACTTATCTT+GGG | 0.468843 | 4.1:+19322657 | MS.gene051329:CDS |
| ACCTTCCTCCCTGGCGTCCG+GGG | 0.473468 | 4.1:+19323271 | MS.gene051329:CDS |
| CCTCCGGCTCGCACTCCATA+AGG | 0.474138 | 4.1:-19324242 | None:intergenic |
| TATTAGTCTCCAGGAGCATA+AGG | 0.475181 | 4.1:+19321368 | MS.gene051329:CDS |
| AAGGAGAATCTGGGTGATGA+TGG | 0.479452 | 4.1:-19320873 | None:intergenic |
| AAAGGACACGCAACCTTGAA+AGG | 0.490367 | 4.1:-19321417 | None:intergenic |
| TCAGCCCTTAAAAGACCAAC+TGG | 0.494342 | 4.1:-19323243 | None:intergenic |
| TTACTGACAATGGTTAAGAT+AGG | 0.494959 | 4.1:+19324554 | MS.gene051329:CDS |
| TGGTGGTAGGAAGCTACTAA+AGG | 0.498563 | 4.1:+19324274 | MS.gene051329:CDS |
| CTGGCGTCCGGGGCTGAAAG+AGG | 0.505882 | 4.1:+19323281 | MS.gene051329:CDS |
| GATTCAAACAAGAAATATAG+AGG | 0.507958 | 4.1:+19324731 | MS.gene051329:CDS |
| CGGAGTAGCCAGTGCTTGGT+TGG | 0.508374 | 4.1:-19322717 | None:intergenic |
| TTACGAGCAATTTCTTCTGA+AGG | 0.511567 | 4.1:-19320913 | None:intergenic |
| ACCACCAGATTTGCGTCCTC+CGG | 0.513118 | 4.1:-19324258 | None:intergenic |
| GCCCCGGACGCCAGGGAGGA+AGG | 0.514958 | 4.1:-19323272 | None:intergenic |
| TCTAATGGCCAACCAAGCAC+TGG | 0.516528 | 4.1:+19322709 | MS.gene051329:CDS |
| TCCGCCCAATACAAGCATCT+TGG | 0.517479 | 4.1:-19324405 | None:intergenic |
| GAGCATAAGGAACTCATTCA+AGG | 0.518919 | 4.1:+19321381 | MS.gene051329:CDS |
| CATGTAAAGTGGCTAGAAGA+TGG | 0.524567 | 4.1:+19324638 | MS.gene051329:CDS |
| TACTGTTGATACCTTTGGGA+AGG | 0.526326 | 4.1:+19321344 | MS.gene051329:CDS |
| TACGAGCAATTTCTTCTGAA+GGG | 0.530624 | 4.1:-19320912 | None:intergenic |
| CCGGCTCGCACTCCATAAGG+AGG | 0.532511 | 4.1:-19324239 | None:intergenic |
| CCTCCTTATGGAGTGCGAGC+CGG | 0.533732 | 4.1:+19324239 | MS.gene051329:CDS |
| TCTTTCAGCCCCGGACGCCA+GGG | 0.533800 | 4.1:-19323279 | None:intergenic |
| GAAGGGAATGTATGAGCTAT+GGG | 0.534827 | 4.1:+19321224 | MS.gene051329:CDS |
| TTATCTTGGGCCAACAGCCA+TGG | 0.536034 | 4.1:+19322670 | MS.gene051329:CDS |
| ATCTCCGCATCCATGGCTGT+TGG | 0.537799 | 4.1:-19322680 | None:intergenic |
| GGGTCATAAACTAGTTTCCC+CGG | 0.538697 | 4.1:-19322737 | None:intergenic |
| TACTTCCGGTTCCAACAAAA+GGG | 0.538775 | 4.1:-19322757 | None:intergenic |
| GTATATGTTGCAGTATGGAT+TGG | 0.538931 | 4.1:+19323215 | MS.gene051329:intron |
| ACACACTCAACTAAACTGTA+AGG | 0.540832 | 4.1:-19324359 | None:intergenic |
| GAATCTGGGTGATGATGGAG+AGG | 0.548209 | 4.1:-19320868 | None:intergenic |
| GATGCTCAGTTAAAGGAGAA+TGG | 0.551488 | 4.1:+19324692 | MS.gene051329:CDS |
| AAATTTACCTCTTTCAGCCC+CGG | 0.552977 | 4.1:-19323288 | None:intergenic |
| TGAAGGGAATGTATGAGCTA+TGG | 0.553852 | 4.1:+19321223 | MS.gene051329:CDS |
| TTTGGCTAAAGATTCGACTT+CGG | 0.554968 | 4.1:-19320782 | None:intergenic |
| TTATGTAGGTATACTTGTGA+AGG | 0.555230 | 4.1:+19321206 | MS.gene051329:intron |
| AAGGACACGCAACCTTGAAA+GGG | 0.557597 | 4.1:-19321416 | None:intergenic |
| ACGTTCATCCCCAGTTGCAA+TGG | 0.557926 | 4.1:+19320839 | MS.gene051329:CDS |
| GTATGAGCTATGGGGTGAAG+GGG | 0.562156 | 4.1:+19321233 | MS.gene051329:CDS |
| GCTTAAAACATGGATGCTCC+GGG | 0.564471 | 4.1:-19324484 | None:intergenic |
| CTGACAACAACCTTCCTCCC+TGG | 0.564474 | 4.1:+19323262 | MS.gene051329:CDS |
| TTACTCCAAACATTACGGTC+AGG | 0.565054 | 4.1:-19323024 | None:intergenic |
| TTAAGGATAACCATGTAAAG+TGG | 0.566285 | 4.1:+19324627 | MS.gene051329:CDS |
| TCTTAGTTCACGATATTGCA+GGG | 0.569214 | 4.1:+19324529 | MS.gene051329:CDS |
| AAAAGCTATCTCCGCATCCA+TGG | 0.574264 | 4.1:-19322687 | None:intergenic |
| TGGGCCAACAGCCATGGATG+CGG | 0.579242 | 4.1:+19322676 | MS.gene051329:CDS |
| TATGAGCTATGGGGTGAAGG+GGG | 0.582219 | 4.1:+19321234 | MS.gene051329:CDS |
| CCAAATGGAAAGGAGAATCT+GGG | 0.583278 | 4.1:-19320882 | None:intergenic |
| AGGGAGCTTCCATTGCAACT+GGG | 0.585486 | 4.1:-19320848 | None:intergenic |
| ATAGAAATTGATAATTGTGA+AGG | 0.588940 | 4.1:+19322542 | MS.gene051329:CDS |
| GGGAGCTTCCATTGCAACTG+GGG | 0.597227 | 4.1:-19320847 | None:intergenic |
| CCTTATGGAGTGCGAGCCGG+AGG | 0.597901 | 4.1:+19324242 | MS.gene051329:CDS |
| TTGCAGGGTATTACTGACAA+TGG | 0.611706 | 4.1:+19324544 | MS.gene051329:CDS |
| AGCATAAGGAACTCATTCAA+GGG | 0.616860 | 4.1:+19321382 | MS.gene051329:CDS |
| GCCGGAGGACGCAAATCTGG+TGG | 0.617590 | 4.1:+19324257 | MS.gene051329:CDS |
| GAGGACGCAAATCTGGTGGT+AGG | 0.619730 | 4.1:+19324261 | MS.gene051329:CDS |
| TTCAGCCCCGGACGCCAGGG+AGG | 0.619819 | 4.1:-19323276 | None:intergenic |
| TGCTCCGGGAAATGATTATG+TGG | 0.620117 | 4.1:-19324470 | None:intergenic |
| TATGTAGGTATACTTGTGAA+GGG | 0.620517 | 4.1:+19321207 | MS.gene051329:intron |
| GACATTAGGGTAGTACGTGA+TGG | 0.622739 | 4.1:+19322994 | MS.gene051329:CDS |
| GGGAGATTGACCAAATGGAA+AGG | 0.626339 | 4.1:-19320892 | None:intergenic |
| AAACTGTAAGGTGCAGTCGA+TGG | 0.631902 | 4.1:-19324347 | None:intergenic |
| AGGGTAGTACGTGATGGACG+CGG | 0.642357 | 4.1:+19323000 | MS.gene051329:CDS |
| CGGCTCGCACTCCATAAGGA+GGG | 0.646260 | 4.1:-19324238 | None:intergenic |
| GAAGAAATCAGCTTAAAACA+TGG | 0.646843 | 4.1:-19324494 | None:intergenic |
| CTGTTGGCCCAAGATAAGTA+CGG | 0.648222 | 4.1:-19322664 | None:intergenic |
| TATGGATTGGAAATGCCAGT+TGG | 0.653758 | 4.1:+19323228 | MS.gene051329:CDS |
| AAGGTGCAGTCGATGGTATG+TGG | 0.664482 | 4.1:-19324340 | None:intergenic |
| GCCAAGATGCTTGTATTGGG+CGG | 0.667054 | 4.1:+19324404 | MS.gene051329:CDS |
| GTGGTAGGAAGCTACTAAAG+GGG | 0.679191 | 4.1:+19324276 | MS.gene051329:CDS |
| ACCAAGCACTGGCTACTCCG+GGG | 0.680846 | 4.1:+19322720 | MS.gene051329:CDS |
| GAGACTAATAACCTTCCCAA+AGG | 0.682399 | 4.1:-19321355 | None:intergenic |
| TGGTAGGAAGCTACTAAAGG+GGG | 0.688576 | 4.1:+19324277 | MS.gene051329:CDS |
| AATCTGGGTGATGATGGAGA+GGG | 0.697131 | 4.1:-19320867 | None:intergenic |
| GAAAACACATAGATACCACA+TGG | 0.722516 | 4.1:-19320731 | None:intergenic |
| AAGGGAATGTATGAGCTATG+GGG | 0.749415 | 4.1:+19321225 | MS.gene051329:CDS |
| TAAGATAGGTCCTTACACAG+AGG | 0.768257 | 4.1:+19324568 | MS.gene051329:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATGACAAATAATTAAA+GGG | - | chr4.1:19321014-19321033 | None:intergenic | 10.0% |
| !! | AATAGAAAATTATAAACAAT+AGG | - | chr4.1:19323851-19323870 | None:intergenic | 10.0% |
| !! | CAATAAATAAATCAAATTAA+AGG | - | chr4.1:19321438-19321457 | None:intergenic | 10.0% |
| !! | TAAAAATGACAAATAATTAA+AGG | - | chr4.1:19321015-19321034 | None:intergenic | 10.0% |
| !!! | AAATTTTTGATTTTTTTATG+TGG | + | chr4.1:19321051-19321070 | MS.gene051329:intron | 10.0% |
| !!! | AATTTTATTTTTTTTATGTG+GGG | + | chr4.1:19321177-19321196 | MS.gene051329:intron | 10.0% |
| !!! | AATTTTTGATTTTTTTATGT+GGG | + | chr4.1:19321052-19321071 | MS.gene051329:intron | 10.0% |
| !!! | ATTTTTTCAATTAAGATAAT+AGG | + | chr4.1:19321946-19321965 | MS.gene051329:intron | 10.0% |
| !!! | TTTTTTCAATTAAGATAATA+GGG | + | chr4.1:19321947-19321966 | MS.gene051329:intron | 10.0% |
| !! | AAATTATAAACAATAGGATT+TGG | - | chr4.1:19323845-19323864 | None:intergenic | 15.0% |
| !!! | AAAGTTTCAATTTTTCATAA+TGG | + | chr4.1:19321082-19321101 | MS.gene051329:intron | 15.0% |
| !!! | AAGTTTATCATTTTTTATAG+TGG | + | chr4.1:19321113-19321132 | MS.gene051329:intron | 15.0% |
| !!! | AAGTTTCAATTTTTCATAAT+GGG | + | chr4.1:19321083-19321102 | MS.gene051329:intron | 15.0% |
| !!! | AGTTTATCATTTTTTATAGT+GGG | + | chr4.1:19321114-19321133 | MS.gene051329:intron | 15.0% |
| !!! | ATTTGATTTATTTATTGCAT+TGG | + | chr4.1:19321441-19321460 | MS.gene051329:intron | 15.0% |
| !!! | GGTTGTTATTATATATATAA+TGG | + | chr4.1:19323997-19324016 | MS.gene051329:intron | 15.0% |
| !!! | TTTTTCAATTAAGATAATAG+GGG | + | chr4.1:19321948-19321967 | MS.gene051329:intron | 15.0% |
| !! | AAATGCAAAAATAACTTGAA+TGG | + | chr4.1:19324124-19324143 | MS.gene051329:intron | 20.0% |
| !! | AATTTACAAAGAAATGTACA+AGG | - | chr4.1:19323332-19323351 | None:intergenic | 20.0% |
| !! | AGAGAAAAAAGAAAAAGAAA+AGG | - | chr4.1:19322847-19322866 | None:intergenic | 20.0% |
| !! | ATACTTAATCTAAATTGTTC+AGG | + | chr4.1:19322960-19322979 | MS.gene051329:intron | 20.0% |
| !! | ATCTTTCTGATAAACTTATT+TGG | + | chr4.1:19323190-19323209 | MS.gene051329:intron | 20.0% |
| !! | TAAAATTACTCCAAACATTA+CGG | - | chr4.1:19323032-19323051 | None:intergenic | 20.0% |
| !! | TAAATAGCAATTGATAGATT+GGG | + | chr4.1:19321518-19321537 | MS.gene051329:intron | 20.0% |
| !! | TACTTAATCTAAATTGTTCA+GGG | + | chr4.1:19322961-19322980 | MS.gene051329:intron | 20.0% |
| !!! | AAAAAAGTACAATCAAACAA+AGG | - | chr4.1:19322208-19322227 | None:intergenic | 20.0% |
| !!! | AAAAAGTACAATCAAACAAA+GGG | - | chr4.1:19322207-19322226 | None:intergenic | 20.0% |
| !!! | AATATAATCAACATGTTTTG+TGG | + | chr4.1:19323465-19323484 | MS.gene051329:intron | 20.0% |
| !!! | ATAGAAATTGATAATTGTGA+AGG | + | chr4.1:19322542-19322561 | MS.gene051329:CDS | 20.0% |
| !!! | ATTTGTCATTTTTATTTCGT+GGG | + | chr4.1:19321021-19321040 | MS.gene051329:intron | 20.0% |
| !!! | CAAAACATGTTGATTATATT+CGG | - | chr4.1:19323465-19323484 | None:intergenic | 20.0% |
| !!! | TATTTGTCATTTTTATTTCG+TGG | + | chr4.1:19321020-19321039 | MS.gene051329:intron | 20.0% |
| !!! | TGATAACTTTGTTTTTTACA+AGG | + | chr4.1:19324193-19324212 | MS.gene051329:intron | 20.0% |
| !!! | TTTTGCTTATAAACAAGATT+AGG | - | chr4.1:19324086-19324105 | None:intergenic | 20.0% |
| ! | ATCTCAAATGAAAACATATG+GGG | - | chr4.1:19322339-19322358 | None:intergenic | 25.0% |
| ! | CAAAATCCAAAACACAAAAA+AGG | - | chr4.1:19321630-19321649 | None:intergenic | 25.0% |
| ! | CATCTCAAATGAAAACATAT+GGG | - | chr4.1:19322340-19322359 | None:intergenic | 25.0% |
| ! | GATAATTGTGAAGGTAATAA+TGG | + | chr4.1:19322551-19322570 | MS.gene051329:CDS | 25.0% |
| ! | GCATGATTAAAACTACATTA+TGG | + | chr4.1:19321747-19321766 | MS.gene051329:intron | 25.0% |
| ! | GTAAATAGCAATTGATAGAT+TGG | + | chr4.1:19321517-19321536 | MS.gene051329:intron | 25.0% |
| ! | TACCTAACTGTAAAATTACT+AGG | - | chr4.1:19323600-19323619 | None:intergenic | 25.0% |
| ! | TATAAAGTGCACAAGATAAA+AGG | - | chr4.1:19323667-19323686 | None:intergenic | 25.0% |
| ! | TTAGGTAATAGACTTTATCA+TGG | + | chr4.1:19323613-19323632 | MS.gene051329:intron | 25.0% |
| !! | AAAATTCTCTTTTGTTCAAC+TGG | - | chr4.1:19322584-19322603 | None:intergenic | 25.0% |
| !! | CAAGTTGAATTTGTAATGTT+GGG | + | chr4.1:19321854-19321873 | MS.gene051329:intron | 25.0% |
| !! | GAACAAAAGAGAATTTTCTT+TGG | + | chr4.1:19322587-19322606 | MS.gene051329:CDS | 25.0% |
| !! | GGCTTTACTGATTATAATAT+TGG | + | chr4.1:19323569-19323588 | MS.gene051329:intron | 25.0% |
| !!! | AATTTTGATATGTCTGGATT+TGG | + | chr4.1:19324041-19324060 | MS.gene051329:intron | 25.0% |
| !!! | ATGTTCTTACACTTGTTTTA+TGG | + | chr4.1:19323070-19323089 | MS.gene051329:intron | 25.0% |
| !!! | ATTTTGATATGTCTGGATTT+GGG | + | chr4.1:19324042-19324061 | MS.gene051329:intron | 25.0% |
| !!! | GTCATTTTACAAGTTAATTG+CGG | + | chr4.1:19323534-19323553 | MS.gene051329:intron | 25.0% |
| !!! | TACTTTTTTTGTTAGTATCC+AGG | + | chr4.1:19322219-19322238 | MS.gene051329:intron | 25.0% |
| !!! | TCACTTTTCAGTTAGATAAA+AGG | - | chr4.1:19323442-19323461 | None:intergenic | 25.0% |
| !!! | TTTATTTTTTTTATGTGGGG+TGG | + | chr4.1:19321180-19321199 | MS.gene051329:intron | 25.0% |
| !!! | TTTGGATTTTGTTGATTTGT+GGG | + | chr4.1:19321639-19321658 | MS.gene051329:intron | 25.0% |
| !!! | TTTTGGATTTTGTTGATTTG+TGG | + | chr4.1:19321638-19321657 | MS.gene051329:intron | 25.0% |
| AAAATTAACCTGCAAAATCC+TGG | - | chr4.1:19322240-19322259 | None:intergenic | 30.0% | |
| AAACTTATTTCCTCTGTGTA+AGG | - | chr4.1:19324581-19324600 | None:intergenic | 30.0% | |
| AAGTCAATAGCTGATTGTAT+AGG | + | chr4.1:19323875-19323894 | MS.gene051329:intron | 30.0% | |
| AAGTCCTCTTAAAGATTTGA+GGG | + | chr4.1:19323914-19323933 | MS.gene051329:intron | 30.0% | |
| AATTTCCAACTAGTGAGATA+TGG | - | chr4.1:19323776-19323795 | None:intergenic | 30.0% | |
| ATAATAGGGGTAAAATTGAG+AGG | + | chr4.1:19321961-19321980 | MS.gene051329:intron | 30.0% | |
| ATATTAGGAAAAGACACAAC+TGG | + | chr4.1:19323976-19323995 | MS.gene051329:intron | 30.0% | |
| ATCAAAAGCTCCAAACAATT+TGG | - | chr4.1:19320803-19320822 | None:intergenic | 30.0% | |
| ATTTCCAACTAGTGAGATAT+GGG | - | chr4.1:19323775-19323794 | None:intergenic | 30.0% | |
| CATGGTTATCCTTAAATTCA+AGG | - | chr4.1:19324622-19324641 | None:intergenic | 30.0% | |
| CCATCTCAAATGAAAACATA+TGG | - | chr4.1:19322341-19322360 | None:intergenic | 30.0% | |
| GAAACTGTATCATCTGATTT+GGG | + | chr4.1:19321720-19321739 | MS.gene051329:intron | 30.0% | |
| GAAGAAATCAGCTTAAAACA+TGG | - | chr4.1:19324497-19324516 | None:intergenic | 30.0% | |
| GAATCTTTAGCCAAATTGTT+TGG | + | chr4.1:19320790-19320809 | MS.gene051329:CDS | 30.0% | |
| GAATGGCGATTATAAGATTA+AGG | + | chr4.1:19324709-19324728 | MS.gene051329:CDS | 30.0% | |
| GACAAAAGAAAGATACTTGT+TGG | - | chr4.1:19322452-19322471 | None:intergenic | 30.0% | |
| GACTTCAAAAAGGAATTCTA+TGG | - | chr4.1:19322364-19322383 | None:intergenic | 30.0% | |
| TAATAGACTTTATCATGGAC+TGG | + | chr4.1:19323618-19323637 | MS.gene051329:intron | 30.0% | |
| TAATAGGGGTAAAATTGAGA+GGG | + | chr4.1:19321962-19321981 | MS.gene051329:intron | 30.0% | |
| TAATGCATCTGACTTCAAAA+AGG | - | chr4.1:19322374-19322393 | None:intergenic | 30.0% | |
| TATGTAGGTATACTTGTGAA+GGG | + | chr4.1:19321207-19321226 | MS.gene051329:intron | 30.0% | |
| TCATACAAGCAAAATAGATC+TGG | - | chr4.1:19322083-19322102 | None:intergenic | 30.0% | |
| TGGAAATTAGAACAGACATA+AGG | + | chr4.1:19323788-19323807 | MS.gene051329:intron | 30.0% | |
| TTAAGGATAACCATGTAAAG+TGG | + | chr4.1:19324627-19324646 | MS.gene051329:CDS | 30.0% | |
| TTACACAGAGGAAATAAGTT+TGG | + | chr4.1:19324580-19324599 | MS.gene051329:CDS | 30.0% | |
| TTACTGACAATGGTTAAGAT+AGG | + | chr4.1:19324554-19324573 | MS.gene051329:CDS | 30.0% | |
| TTATGTAGGTATACTTGTGA+AGG | + | chr4.1:19321206-19321225 | MS.gene051329:intron | 30.0% | |
| TTTACAAGTTAATTGCGGAA+GGG | + | chr4.1:19323539-19323558 | MS.gene051329:intron | 30.0% | |
| TTTGATGTTATGTGTGCAAA+GGG | + | chr4.1:19321603-19321622 | MS.gene051329:intron | 30.0% | |
| ! | AACTACATTATGGTTCTGTT+CGG | + | chr4.1:19321757-19321776 | MS.gene051329:intron | 30.0% |
| ! | AATTTTGTCTTGCTAAACAG+AGG | + | chr4.1:19322138-19322157 | MS.gene051329:intron | 30.0% |
| ! | AATTTTTCTTCTGATCCGAA+AGG | + | chr4.1:19323348-19323367 | MS.gene051329:intron | 30.0% |
| ! | ATCTATGTGTTTTCTTTCAC+AGG | + | chr4.1:19320740-19320759 | MS.gene051329:CDS | 30.0% |
| ! | ATTTTTCCAATCTCAGCAAT+TGG | + | chr4.1:19323411-19323430 | MS.gene051329:intron | 30.0% |
| ! | CACCTAGTAATTTTACAGTT+AGG | + | chr4.1:19323595-19323614 | MS.gene051329:intron | 30.0% |
| ! | CCATATGTTTTCATTTGAGA+TGG | + | chr4.1:19322338-19322357 | MS.gene051329:intron | 30.0% |
| ! | GCAAGTTGAATTTGTAATGT+TGG | + | chr4.1:19321853-19321872 | MS.gene051329:intron | 30.0% |
| ! | GTTGATAAACTAGCTTATAG+CGG | + | chr4.1:19321800-19321819 | MS.gene051329:intron | 30.0% |
| ! | TATTGCAATGGATTCTGTTT+AGG | + | chr4.1:19322896-19322915 | MS.gene051329:intron | 30.0% |
| ! | TCTATTCACTGTCATTTCAT+TGG | + | chr4.1:19321698-19321717 | MS.gene051329:intron | 30.0% |
| ! | TGTTTTCTTTCACAGGTTAT+TGG | + | chr4.1:19320747-19320766 | MS.gene051329:CDS | 30.0% |
| ! | TTCTTTTGTCCATCATTGTT+TGG | + | chr4.1:19322462-19322481 | MS.gene051329:intron | 30.0% |
| ! | TTTTACAAGTTAATTGCGGA+AGG | + | chr4.1:19323538-19323557 | MS.gene051329:intron | 30.0% |
| ! | TTTTGATGTTATGTGTGCAA+AGG | + | chr4.1:19321602-19321621 | MS.gene051329:intron | 30.0% |
| !! | CTATCAATTGCTATTTACGT+AGG | - | chr4.1:19321515-19321534 | None:intergenic | 30.0% |
| !! | GGAGTATGAGTTTTTCAAAA+AGG | - | chr4.1:19322431-19322450 | None:intergenic | 30.0% |
| !! | TGTTTGGAGTAATTTTAAGC+AGG | + | chr4.1:19323035-19323054 | MS.gene051329:CDS | 30.0% |
| AAGTGCACAAGATAAAAGGT+AGG | - | chr4.1:19323663-19323682 | None:intergenic | 35.0% | |
| ACAAAGTGACCAAACAATGA+TGG | - | chr4.1:19322474-19322493 | None:intergenic | 35.0% | |
| ACACACTCAACTAAACTGTA+AGG | - | chr4.1:19324362-19324381 | None:intergenic | 35.0% | |
| ACTAGTGAGATATGGGAATA+AGG | - | chr4.1:19323768-19323787 | None:intergenic | 35.0% | |
| AGCATAAGGAACTCATTCAA+GGG | + | chr4.1:19321382-19321401 | MS.gene051329:CDS | 35.0% | |
| AGGATTACTGTTGATACCTT+TGG | + | chr4.1:19321339-19321358 | MS.gene051329:CDS | 35.0% | |
| AGGTGAGTAGGACTAATATT+AGG | + | chr4.1:19323961-19323980 | MS.gene051329:intron | 35.0% | |
| AGTCCTCTTAAAGATTTGAG+GGG | + | chr4.1:19323915-19323934 | MS.gene051329:intron | 35.0% | |
| AGTCTACTACATCATACAAG+TGG | - | chr4.1:19323133-19323152 | None:intergenic | 35.0% | |
| AGTGCACAAGATAAAAGGTA+GGG | - | chr4.1:19323662-19323681 | None:intergenic | 35.0% | |
| ATAATATGTGACCCTCCTTA+TGG | + | chr4.1:19324227-19324246 | MS.gene051329:CDS | 35.0% | |
| ATGGTAGAAATCTTAGTTGC+CGG | + | chr4.1:19324016-19324035 | MS.gene051329:intron | 35.0% | |
| CAAGTCCTCTTAAAGATTTG+AGG | + | chr4.1:19323913-19323932 | MS.gene051329:intron | 35.0% | |
| CATGGTAAATTATGATCACG+AGG | + | chr4.1:19321473-19321492 | MS.gene051329:intron | 35.0% | |
| CCAGACATATCAAAATTTGC+CGG | - | chr4.1:19324038-19324057 | None:intergenic | 35.0% | |
| CTTACTCACTATCATCTACA+AGG | - | chr4.1:19321830-19321849 | None:intergenic | 35.0% | |
| GAAAAGGTGAAGAATGAAGA+AGG | - | chr4.1:19322831-19322850 | None:intergenic | 35.0% | |
| GATGCAACACCTTGAATTTA+AGG | + | chr4.1:19324610-19324629 | MS.gene051329:CDS | 35.0% | |
| GCATTATGTTCTATGTCCAT+TGG | - | chr4.1:19323815-19323834 | None:intergenic | 35.0% | |
| GGAAACTGTATCATCTGATT+TGG | + | chr4.1:19321719-19321738 | MS.gene051329:intron | 35.0% | |
| GGATAGGAAACACATAATTC+CGG | - | chr4.1:19322186-19322205 | None:intergenic | 35.0% | |
| GGATTACTGTTGATACCTTT+GGG | + | chr4.1:19321340-19321359 | MS.gene051329:CDS | 35.0% | |
| GTACAATCAAACAAAGGGAT+AGG | - | chr4.1:19322202-19322221 | None:intergenic | 35.0% | |
| GTATATGTTGCAGTATGGAT+TGG | + | chr4.1:19323215-19323234 | MS.gene051329:intron | 35.0% | |
| GTTCACTTATATCCCTTTCA+AGG | + | chr4.1:19321404-19321423 | MS.gene051329:CDS | 35.0% | |
| TACGAGCAATTTCTTCTGAA+GGG | - | chr4.1:19320915-19320934 | None:intergenic | 35.0% | |
| TAGATCGTGAAAGGATAAGT+TGG | - | chr4.1:19322878-19322897 | None:intergenic | 35.0% | |
| TATTCCCATATCTCACTAGT+TGG | + | chr4.1:19323768-19323787 | MS.gene051329:intron | 35.0% | |
| TCTTAGTTCACGATATTGCA+GGG | + | chr4.1:19324529-19324548 | MS.gene051329:CDS | 35.0% | |
| TGAAAAGCCGTACTTATCTT+GGG | + | chr4.1:19322657-19322676 | MS.gene051329:CDS | 35.0% | |
| TTACGAGCAATTTCTTCTGA+AGG | - | chr4.1:19320916-19320935 | None:intergenic | 35.0% | |
| TTCTTAGTTCACGATATTGC+AGG | + | chr4.1:19324528-19324547 | MS.gene051329:CDS | 35.0% | |
| TTGAAAAGCCGTACTTATCT+TGG | + | chr4.1:19322656-19322675 | MS.gene051329:CDS | 35.0% | |
| TTTGGCTAAAGATTCGACTT+CGG | - | chr4.1:19320785-19320804 | None:intergenic | 35.0% | |
| ! | ATTCTCTTTTGTTCAACTGG+AGG | - | chr4.1:19322581-19322600 | None:intergenic | 35.0% |
| ! | ATTTTCTTTGGTCGTGAAGT+TGG | + | chr4.1:19322599-19322618 | MS.gene051329:CDS | 35.0% |
| ! | CTAGTTTATGACCCTTTTGT+TGG | + | chr4.1:19322746-19322765 | MS.gene051329:CDS | 35.0% |
| !! | TATAAGCATCCGCTTTTGTT+CGG | + | chr4.1:19323683-19323702 | MS.gene051329:intron | 35.0% |
| !! | TGTATCATCTGATTTGGGTT+TGG | + | chr4.1:19321725-19321744 | MS.gene051329:intron | 35.0% |
| !!! | AAATGCCAGTTGGTCTTTTA+AGG | + | chr4.1:19323238-19323257 | MS.gene051329:CDS | 35.0% |
| !!! | AAGGGACCTTTTTTGTGTTT+TGG | + | chr4.1:19321621-19321640 | MS.gene051329:intron | 35.0% |
| !!! | AATGCCAGTTGGTCTTTTAA+GGG | + | chr4.1:19323239-19323258 | MS.gene051329:CDS | 35.0% |
| AAATTTACCTCTTTCAGCCC+CGG | - | chr4.1:19323291-19323310 | None:intergenic | 40.0% | |
| AAGGGAATGTATGAGCTATG+GGG | + | chr4.1:19321225-19321244 | MS.gene051329:CDS | 40.0% | |
| ACCAAATGGAAAGGAGAATC+TGG | - | chr4.1:19320886-19320905 | None:intergenic | 40.0% | |
| AGAACAGACATAAGGTCCAA+TGG | + | chr4.1:19323796-19323815 | MS.gene051329:intron | 40.0% | |
| AGCTTAAAACATGGATGCTC+CGG | - | chr4.1:19324488-19324507 | None:intergenic | 40.0% | |
| AGGAAATAAGTTTGGCAGCT+AGG | + | chr4.1:19324588-19324607 | MS.gene051329:CDS | 40.0% | |
| ATAAAAGGTAGGGTAGGACT+TGG | - | chr4.1:19323652-19323671 | None:intergenic | 40.0% | |
| ATACTTCCGGTTCCAACAAA+AGG | - | chr4.1:19322761-19322780 | None:intergenic | 40.0% | |
| CACAAGATAAAAGGTAGGGT+AGG | - | chr4.1:19323658-19323677 | None:intergenic | 40.0% | |
| CAGCAACACAATTACCGAAA+GGG | - | chr4.1:19323501-19323520 | None:intergenic | 40.0% | |
| CATGTAAAGTGGCTAGAAGA+TGG | + | chr4.1:19324638-19324657 | MS.gene051329:CDS | 40.0% | |
| CCAAATGGAAAGGAGAATCT+GGG | - | chr4.1:19320885-19320904 | None:intergenic | 40.0% | |
| CCATTGCAATAGATCGTGAA+AGG | - | chr4.1:19322887-19322906 | None:intergenic | 40.0% | |
| CCTTTCACGATCTATTGCAA+TGG | + | chr4.1:19322884-19322903 | MS.gene051329:intron | 40.0% | |
| GAAGGGAATGTATGAGCTAT+GGG | + | chr4.1:19321224-19321243 | MS.gene051329:CDS | 40.0% | |
| GACTCTTCTTCTCTCAATAC+AGG | - | chr4.1:19324449-19324468 | None:intergenic | 40.0% | |
| GAGACTAATAACCTTCCCAA+AGG | - | chr4.1:19321358-19321377 | None:intergenic | 40.0% | |
| GAGCATAAGGAACTCATTCA+AGG | + | chr4.1:19321381-19321400 | MS.gene051329:CDS | 40.0% | |
| GATGCTCAGTTAAAGGAGAA+TGG | + | chr4.1:19324692-19324711 | MS.gene051329:CDS | 40.0% | |
| GCAAAACCAATTGCTGAGAT+TGG | - | chr4.1:19323420-19323439 | None:intergenic | 40.0% | |
| GTCTCCACATAATCATTTCC+CGG | + | chr4.1:19324466-19324485 | MS.gene051329:CDS | 40.0% | |
| GTGGTTTATTACCTCCCTTT+CGG | + | chr4.1:19323484-19323503 | MS.gene051329:intron | 40.0% | |
| GTTAAGCAATCTCCTTAGAC+AGG | - | chr4.1:19323732-19323751 | None:intergenic | 40.0% | |
| TAAGATAGGTCCTTACACAG+AGG | + | chr4.1:19324568-19324587 | MS.gene051329:CDS | 40.0% | |
| TAATTGCGGAAGGGATAGAT+TGG | + | chr4.1:19323548-19323567 | MS.gene051329:intron | 40.0% | |
| TACTATGCACCGAACAAAAG+CGG | - | chr4.1:19323695-19323714 | None:intergenic | 40.0% | |
| TACTTCCGGTTCCAACAAAA+GGG | - | chr4.1:19322760-19322779 | None:intergenic | 40.0% | |
| TAGCTTCTATTGAGAGTTGC+CGG | + | chr4.1:19322164-19322183 | MS.gene051329:intron | 40.0% | |
| TATGGCAACTTTCTCTCATC+TGG | - | chr4.1:19321297-19321316 | None:intergenic | 40.0% | |
| TCAATAGTTTCCTGCACTCA+AGG | - | chr4.1:19321570-19321589 | None:intergenic | 40.0% | |
| TCAGCAACACAATTACCGAA+AGG | - | chr4.1:19323502-19323521 | None:intergenic | 40.0% | |
| TCTCCCCTCAAATCTTTAAG+AGG | - | chr4.1:19323921-19323940 | None:intergenic | 40.0% | |
| TCTTAAAGATTTGAGGGGAG+AGG | + | chr4.1:19323920-19323939 | MS.gene051329:intron | 40.0% | |
| TGAAGGGAATGTATGAGCTA+TGG | + | chr4.1:19321223-19321242 | MS.gene051329:CDS | 40.0% | |
| TGAGAGAAAGTTGCCATACT+TGG | + | chr4.1:19321299-19321318 | MS.gene051329:CDS | 40.0% | |
| TGAGATATGGGAATAAGGCT+TGG | - | chr4.1:19323763-19323782 | None:intergenic | 40.0% | |
| TGCTGCAACAAGAATACTTC+CGG | - | chr4.1:19322774-19322793 | None:intergenic | 40.0% | |
| TGGAATCTAACAGCACTTTC+AGG | + | chr4.1:19321319-19321338 | MS.gene051329:CDS | 40.0% | |
| TGGCTGTATATGTTGCAGTA+TGG | + | chr4.1:19323210-19323229 | MS.gene051329:intron | 40.0% | |
| TTACTCCAAACATTACGGTC+AGG | - | chr4.1:19323027-19323046 | None:intergenic | 40.0% | |
| TTAGATTCTTCCTTGAGTGC+AGG | + | chr4.1:19321557-19321576 | MS.gene051329:intron | 40.0% | |
| TTGGCTAAAGATTCGACTTC+GGG | - | chr4.1:19320784-19320803 | None:intergenic | 40.0% | |
| ! | CATCTTCTAGCCACTTTACA+TGG | - | chr4.1:19324640-19324659 | None:intergenic | 40.0% |
| ! | GTGCTGTTAGATTCCAAGTA+TGG | - | chr4.1:19321315-19321334 | None:intergenic | 40.0% |
| ! | GTTAGTATCCAGGATTTTGC+AGG | + | chr4.1:19322229-19322248 | MS.gene051329:intron | 40.0% |
| ! | GTTTGGTCACTTTGTTTGCA+GGG | + | chr4.1:19322479-19322498 | MS.gene051329:intron | 40.0% |
| ! | TACTGTTGATACCTTTGGGA+AGG | + | chr4.1:19321344-19321363 | MS.gene051329:CDS | 40.0% |
| ! | TATGACCCTTTTGTTGGAAC+CGG | + | chr4.1:19322752-19322771 | MS.gene051329:CDS | 40.0% |
| ! | TATTAGTCTCCAGGAGCATA+AGG | + | chr4.1:19321368-19321387 | MS.gene051329:CDS | 40.0% |
| ! | TGCGGAGATAGCTTTTCTAA+TGG | + | chr4.1:19322694-19322713 | MS.gene051329:CDS | 40.0% |
| ! | TGTTTGGTCACTTTGTTTGC+AGG | + | chr4.1:19322478-19322497 | MS.gene051329:intron | 40.0% |
| ! | TTGCAGGGTATTACTGACAA+TGG | + | chr4.1:19324544-19324563 | MS.gene051329:CDS | 40.0% |
| !! | CCGGCAAATTTTGATATGTC+TGG | + | chr4.1:19324035-19324054 | MS.gene051329:intron | 40.0% |
| !! | TATGGATTGGAAATGCCAGT+TGG | + | chr4.1:19323228-19323247 | MS.gene051329:CDS | 40.0% |
| !!! | TCATTTTGGAGCAATGACCA+TGG | + | chr4.1:19322796-19322815 | MS.gene051329:CDS | 40.0% |
| AAAAGCTATCTCCGCATCCA+TGG | - | chr4.1:19322690-19322709 | None:intergenic | 45.0% | |
| AAACTGTAAGGTGCAGTCGA+TGG | - | chr4.1:19324350-19324369 | None:intergenic | 45.0% | |
| AAAGGACACGCAACCTTGAA+AGG | - | chr4.1:19321420-19321439 | None:intergenic | 45.0% | |
| AAGGACACGCAACCTTGAAA+GGG | - | chr4.1:19321419-19321438 | None:intergenic | 45.0% | |
| AAGGAGAATCTGGGTGATGA+TGG | - | chr4.1:19320876-19320895 | None:intergenic | 45.0% | |
| AGCATCTATGTGCTGTGTCT+TGG | + | chr4.1:19323373-19323392 | MS.gene051329:intron | 45.0% | |
| ATGTATGAGCTATGGGGTGA+AGG | + | chr4.1:19321231-19321250 | MS.gene051329:CDS | 45.0% | |
| ATGTGGGGTGGCAATTATGT+AGG | + | chr4.1:19321192-19321211 | MS.gene051329:intron | 45.0% | |
| CAACACAATTACCGAAAGGG+AGG | - | chr4.1:19323498-19323517 | None:intergenic | 45.0% | |
| CCCAGATTCTCCTTTCCATT+TGG | + | chr4.1:19320882-19320901 | MS.gene051329:CDS | 45.0% | |
| CTGAAGGGAGATTGACCAAA+TGG | - | chr4.1:19320900-19320919 | None:intergenic | 45.0% | |
| CTGTTGGCCCAAGATAAGTA+CGG | - | chr4.1:19322667-19322686 | None:intergenic | 45.0% | |
| GAAAACCAGAGCACAACTTC+TGG | + | chr4.1:19322516-19322535 | MS.gene051329:CDS | 45.0% | |
| GAATGAGTTCCTTATGCTCC+TGG | - | chr4.1:19321380-19321399 | None:intergenic | 45.0% | |
| GACATTAGGGTAGTACGTGA+TGG | + | chr4.1:19322994-19323013 | MS.gene051329:CDS | 45.0% | |
| GCACATAGATGCTCTCCTTT+CGG | - | chr4.1:19323366-19323385 | None:intergenic | 45.0% | |
| GCTGCCAAGATGCTTGTATT+GGG | + | chr4.1:19324401-19324420 | MS.gene051329:CDS | 45.0% | |
| GCTTAAAACATGGATGCTCC+GGG | - | chr4.1:19324487-19324506 | None:intergenic | 45.0% | |
| GGACATTAGTATGAGCTCTG+AGG | + | chr4.1:19323941-19323960 | MS.gene051329:intron | 45.0% | |
| GGGAGATTGACCAAATGGAA+AGG | - | chr4.1:19320895-19320914 | None:intergenic | 45.0% | |
| GGTGGTAGGAAGCTACTAAA+GGG | + | chr4.1:19324275-19324294 | MS.gene051329:CDS | 45.0% | |
| GTGGTAGGAAGCTACTAAAG+GGG | + | chr4.1:19324276-19324295 | MS.gene051329:CDS | 45.0% | |
| TCAGCCCTTAAAAGACCAAC+TGG | - | chr4.1:19323246-19323265 | None:intergenic | 45.0% | |
| TCCAGTGGATGCTCAGTTAA+AGG | + | chr4.1:19324685-19324704 | MS.gene051329:CDS | 45.0% | |
| TCCTTTAACTGAGCATCCAC+TGG | - | chr4.1:19324689-19324708 | None:intergenic | 45.0% | |
| TGCTCCGGGAAATGATTATG+TGG | - | chr4.1:19324473-19324492 | None:intergenic | 45.0% | |
| TGCTGCCAAGATGCTTGTAT+TGG | + | chr4.1:19324400-19324419 | MS.gene051329:CDS | 45.0% | |
| TGGTAGGAAGCTACTAAAGG+GGG | + | chr4.1:19324277-19324296 | MS.gene051329:CDS | 45.0% | |
| TGGTGGTAGGAAGCTACTAA+AGG | + | chr4.1:19324274-19324293 | MS.gene051329:CDS | 45.0% | |
| TGTATGAGCTATGGGGTGAA+GGG | + | chr4.1:19321232-19321251 | MS.gene051329:CDS | 45.0% | |
| TGTGGAGCCTTACATTGTTC+CGG | + | chr4.1:19324301-19324320 | MS.gene051329:CDS | 45.0% | |
| TTGTCGTCCGGAACAATGTA+AGG | - | chr4.1:19324311-19324330 | None:intergenic | 45.0% | |
| ! | CGGCTTTTCAACTCGTATGT+CGG | - | chr4.1:19322647-19322666 | None:intergenic | 45.0% |
| ! | CTTGTTGCAGCAGCTCATTT+TGG | + | chr4.1:19322782-19322801 | MS.gene051329:CDS | 45.0% |
| ! | GGGTCATAAACTAGTTTCCC+CGG | - | chr4.1:19322740-19322759 | None:intergenic | 45.0% |
| ! | TGGGAAGGTTATTAGTCTCC+AGG | + | chr4.1:19321359-19321378 | MS.gene051329:CDS | 45.0% |
| ! | TGGTCTGTTCTTTTGTCGTC+CGG | - | chr4.1:19324323-19324342 | None:intergenic | 45.0% |
| ! | TTCTGCAGTTTTCAGTCCAG+TGG | + | chr4.1:19324670-19324689 | MS.gene051329:CDS | 45.0% |
| !! | AATCTGGGTGATGATGGAGA+GGG | - | chr4.1:19320870-19320889 | None:intergenic | 45.0% |
| !! | AGGGTGCTGACATTGACATT+AGG | + | chr4.1:19322980-19322999 | MS.gene051329:intron | 45.0% |
| !! | GGGTGCTGACATTGACATTA+GGG | + | chr4.1:19322981-19323000 | MS.gene051329:intron | 45.0% |
| !! | GGTAATTGTGTTGCTGACTC+TGG | + | chr4.1:19323505-19323524 | MS.gene051329:intron | 45.0% |
| !! | TGAGTGCTGAATCCTGTCTA+AGG | + | chr4.1:19323717-19323736 | MS.gene051329:intron | 45.0% |
| !!! | AAAATTTTATTTTTTTTATG+TGG | + | chr4.1:19321175-19321194 | MS.gene051329:intron | 5.0% |
| !!! | AAATTTTATTTTTTTTATGT+GGG | + | chr4.1:19321176-19321195 | MS.gene051329:intron | 5.0% |
| !!! | AATTTTTTAATTTTTTATAG+TGG | + | chr4.1:19321144-19321163 | MS.gene051329:intron | 5.0% |
| !!! | ATTTTTTAATTTTTTATAGT+GGG | + | chr4.1:19321145-19321164 | MS.gene051329:intron | 5.0% |
| AAGGTGCAGTCGATGGTATG+TGG | - | chr4.1:19324343-19324362 | None:intergenic | 50.0% | |
| ACGTTCATCCCCAGTTGCAA+TGG | + | chr4.1:19320839-19320858 | MS.gene051329:CDS | 50.0% | |
| AGGGAGCTTCCATTGCAACT+GGG | - | chr4.1:19320851-19320870 | None:intergenic | 50.0% | |
| ATCAGCCAGAAGTTGTGCTC+TGG | - | chr4.1:19322524-19322543 | None:intergenic | 50.0% | |
| GAAGAAGGAGAAGCAGACCA+TGG | - | chr4.1:19322816-19322835 | None:intergenic | 50.0% | |
| GCCAAGATGCTTGTATTGGG+CGG | + | chr4.1:19324404-19324423 | MS.gene051329:CDS | 50.0% | |
| GGGGAATAAGAGATGCACAC+AGG | - | chr4.1:19322320-19322339 | None:intergenic | 50.0% | |
| GGGTAGCTATGAGGAGTTGA+AGG | + | chr4.1:19321254-19321273 | MS.gene051329:CDS | 50.0% | |
| GTATGAGCTATGGGGTGAAG+GGG | + | chr4.1:19321233-19321252 | MS.gene051329:CDS | 50.0% | |
| TATGAGCTATGGGGTGAAGG+GGG | + | chr4.1:19321234-19321253 | MS.gene051329:CDS | 50.0% | |
| TCCGCCCAATACAAGCATCT+TGG | - | chr4.1:19324408-19324427 | None:intergenic | 50.0% | |
| TCTAATGGCCAACCAAGCAC+TGG | + | chr4.1:19322709-19322728 | MS.gene051329:CDS | 50.0% | |
| TTATCTTGGGCCAACAGCCA+TGG | + | chr4.1:19322670-19322689 | MS.gene051329:CDS | 50.0% | |
| ! | TTGCATTGGTGCTCTCTGCA+TGG | + | chr4.1:19321455-19321474 | MS.gene051329:intron | 50.0% |
| !! | GAATCTGGGTGATGATGGAG+AGG | - | chr4.1:19320871-19320890 | None:intergenic | 50.0% |
| !! | GTATGAGCTCTGAGGTGAGT+AGG | + | chr4.1:19323949-19323968 | MS.gene051329:intron | 50.0% |
| !! | GTGAAGTTGGTGCTGCTGAT+AGG | + | chr4.1:19322612-19322631 | MS.gene051329:CDS | 50.0% |
| ACCACCAGATTTGCGTCCTC+CGG | - | chr4.1:19324261-19324280 | None:intergenic | 55.0% | |
| ATCTCCGCATCCATGGCTGT+TGG | - | chr4.1:19322683-19322702 | None:intergenic | 55.0% | |
| CTGACAACAACCTTCCTCCC+TGG | + | chr4.1:19323262-19323281 | MS.gene051329:CDS | 55.0% | |
| GAAGCTACTAAAGGGGGCTG+TGG | + | chr4.1:19324283-19324302 | MS.gene051329:CDS | 55.0% | |
| GAGGACGCAAATCTGGTGGT+AGG | + | chr4.1:19324261-19324280 | MS.gene051329:CDS | 55.0% | |
| GAGGGAGCTTCCATTGCAAC+TGG | - | chr4.1:19320852-19320871 | None:intergenic | 55.0% | |
| GCGGTCCTGACCGTAATGTT+TGG | + | chr4.1:19323019-19323038 | MS.gene051329:CDS | 55.0% | |
| GGGAGCTTCCATTGCAACTG+GGG | - | chr4.1:19320850-19320869 | None:intergenic | 55.0% | |
| ! | GGGGATGAACGTCGTCGTTT+TGG | - | chr4.1:19320831-19320850 | None:intergenic | 55.0% |
| !! | AACCAAGCACTGGCTACTCC+GGG | + | chr4.1:19322719-19322738 | MS.gene051329:CDS | 55.0% |
| !! | AGGGTAGTACGTGATGGACG+CGG | + | chr4.1:19323000-19323019 | MS.gene051329:CDS | 55.0% |
| !! | CAACCAAGCACTGGCTACTC+CGG | + | chr4.1:19322718-19322737 | MS.gene051329:CDS | 55.0% |
| CCTCCTTATGGAGTGCGAGC+CGG | + | chr4.1:19324239-19324258 | MS.gene051329:CDS | 60.0% | |
| CGGAGTAGCCAGTGCTTGGT+TGG | - | chr4.1:19322720-19322739 | None:intergenic | 60.0% | |
| CGGCTCGCACTCCATAAGGA+GGG | - | chr4.1:19324241-19324260 | None:intergenic | 60.0% | |
| GGGTGAAGGGGGTAGCTATG+AGG | + | chr4.1:19321245-19321264 | MS.gene051329:CDS | 60.0% | |
| TGGGCCAACAGCCATGGATG+CGG | + | chr4.1:19322676-19322695 | MS.gene051329:CDS | 60.0% | |
| !! | ACCAAGCACTGGCTACTCCG+GGG | + | chr4.1:19322720-19322739 | MS.gene051329:CDS | 60.0% |
| AACCTTCCTCCCTGGCGTCC+GGG | + | chr4.1:19323270-19323289 | MS.gene051329:CDS | 65.0% | |
| CAACCTTCCTCCCTGGCGTC+CGG | + | chr4.1:19323269-19323288 | MS.gene051329:CDS | 65.0% | |
| CCTTATGGAGTGCGAGCCGG+AGG | + | chr4.1:19324242-19324261 | MS.gene051329:CDS | 65.0% | |
| CGAGCCGGAGGACGCAAATC+TGG | + | chr4.1:19324254-19324273 | MS.gene051329:CDS | 65.0% | |
| GCCGGAGGACGCAAATCTGG+TGG | + | chr4.1:19324257-19324276 | MS.gene051329:CDS | 65.0% | |
| TCCCCGGAGTAGCCAGTGCT+TGG | - | chr4.1:19322724-19322743 | None:intergenic | 65.0% | |
| TCTTTCAGCCCCGGACGCCA+GGG | - | chr4.1:19323282-19323301 | None:intergenic | 65.0% | |
| ! | CCGGCTCGCACTCCATAAGG+AGG | - | chr4.1:19324242-19324261 | None:intergenic | 65.0% |
| ! | CCTCCGGCTCGCACTCCATA+AGG | - | chr4.1:19324245-19324264 | None:intergenic | 65.0% |
| ACCTTCCTCCCTGGCGTCCG+GGG | + | chr4.1:19323271-19323290 | MS.gene051329:CDS | 70.0% | |
| CTCTTTCAGCCCCGGACGCC+AGG | - | chr4.1:19323283-19323302 | None:intergenic | 70.0% | |
| CTGGCGTCCGGGGCTGAAAG+AGG | + | chr4.1:19323281-19323300 | MS.gene051329:CDS | 70.0% | |
| TTCAGCCCCGGACGCCAGGG+AGG | - | chr4.1:19323279-19323298 | None:intergenic | 75.0% | |
| ! | GCCCCGGACGCCAGGGAGGA+AGG | - | chr4.1:19323275-19323294 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 19320733 | 19324766 | 19320733 | ID=MS.gene051329 |
| chr4.1 | mRNA | 19320733 | 19324766 | 19320733 | ID=MS.gene051329.t1;Parent=MS.gene051329 |
| chr4.1 | exon | 19320733 | 19320949 | 19320733 | ID=MS.gene051329.t1.exon1;Parent=MS.gene051329.t1 |
| chr4.1 | CDS | 19320733 | 19320949 | 19320733 | ID=cds.MS.gene051329.t1;Parent=MS.gene051329.t1 |
| chr4.1 | exon | 19321214 | 19321425 | 19321214 | ID=MS.gene051329.t1.exon2;Parent=MS.gene051329.t1 |
| chr4.1 | CDS | 19321214 | 19321425 | 19321214 | ID=cds.MS.gene051329.t1;Parent=MS.gene051329.t1 |
| chr4.1 | exon | 19322500 | 19322817 | 19322500 | ID=MS.gene051329.t1.exon3;Parent=MS.gene051329.t1 |
| chr4.1 | CDS | 19322500 | 19322817 | 19322500 | ID=cds.MS.gene051329.t1;Parent=MS.gene051329.t1 |
| chr4.1 | exon | 19322982 | 19323056 | 19322982 | ID=MS.gene051329.t1.exon4;Parent=MS.gene051329.t1 |
| chr4.1 | CDS | 19322982 | 19323056 | 19322982 | ID=cds.MS.gene051329.t1;Parent=MS.gene051329.t1 |
| chr4.1 | exon | 19323228 | 19323302 | 19323228 | ID=MS.gene051329.t1.exon5;Parent=MS.gene051329.t1 |
| chr4.1 | CDS | 19323228 | 19323302 | 19323228 | ID=cds.MS.gene051329.t1;Parent=MS.gene051329.t1 |
| chr4.1 | exon | 19324215 | 19324766 | 19324215 | ID=MS.gene051329.t1.exon6;Parent=MS.gene051329.t1 |
| chr4.1 | CDS | 19324215 | 19324766 | 19324215 | ID=cds.MS.gene051329.t1;Parent=MS.gene051329.t1 |
| Gene Sequence |
| Protein sequence |
