Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65812.t1 | ABD28297.1 | 93.9 | 658 | 28 | 3 | 5 | 661 | 8 | 654 | 0.00E+00 | 1177.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65812.t1 | F4JCX9 | 34.1 | 690 | 365 | 19 | 2 | 646 | 5 | 649 | 1.6e-67 | 258.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65812.t1 | Q2HW86 | 93.9 | 658 | 28 | 3 | 5 | 661 | 8 | 654 | 0.0e+00 | 1177.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051329 | MS.gene65812 | -0.807056 | 6.09E-50 | -1.69E-46 |
| MS.gene053162 | MS.gene65812 | 0.801301 | 9.60E-49 | -1.69E-46 |
| MS.gene053740 | MS.gene65812 | 0.803841 | 2.88E-49 | -1.69E-46 |
| MS.gene056338 | MS.gene65812 | -0.814596 | 1.42E-51 | -1.69E-46 |
| MS.gene057989 | MS.gene65812 | -0.849411 | 3.29E-60 | -1.69E-46 |
| MS.gene057992 | MS.gene65812 | -0.832258 | 1.05E-55 | -1.69E-46 |
| MS.gene061218 | MS.gene65812 | 0.808088 | 3.68E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65812.t1 | MTR_2g084520 | 67.647 | 102 | 24 | 1 | 136 | 228 | 4 | 105 | 1.69e-37 | 142 |
| MS.gene65812.t1 | MTR_2g008750 | 39.007 | 141 | 78 | 2 | 466 | 601 | 490 | 627 | 1.83e-18 | 90.1 |
| MS.gene65812.t1 | MTR_2g008750 | 39.007 | 141 | 78 | 2 | 466 | 601 | 506 | 643 | 1.93e-18 | 90.1 |
| MS.gene65812.t1 | MTR_4g094248 | 47.674 | 86 | 42 | 1 | 487 | 572 | 457 | 539 | 4.04e-15 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65812.t1 | AT3G54500 | 40.510 | 627 | 332 | 18 | 2 | 613 | 5 | 605 | 8.36e-116 | 361 |
| MS.gene65812.t1 | AT3G54500 | 40.510 | 627 | 332 | 18 | 2 | 613 | 5 | 605 | 8.36e-116 | 361 |
| MS.gene65812.t1 | AT3G54500 | 40.159 | 630 | 329 | 17 | 2 | 613 | 5 | 604 | 8.96e-116 | 361 |
| MS.gene65812.t1 | AT3G54500 | 38.520 | 662 | 327 | 19 | 2 | 613 | 5 | 636 | 5.50e-109 | 344 |
| MS.gene65812.t1 | AT3G54500 | 41.091 | 550 | 280 | 16 | 82 | 613 | 2 | 525 | 7.47e-103 | 325 |
| MS.gene65812.t1 | AT3G54500 | 41.091 | 550 | 280 | 16 | 82 | 613 | 2 | 525 | 7.47e-103 | 325 |
| MS.gene65812.t1 | AT3G54500 | 36.834 | 657 | 328 | 20 | 2 | 613 | 5 | 619 | 2.18e-94 | 305 |
| MS.gene65812.t1 | AT3G54500 | 39.048 | 420 | 221 | 13 | 210 | 613 | 9 | 409 | 6.39e-64 | 219 |
| MS.gene65812.t1 | AT5G64170 | 46.226 | 106 | 49 | 1 | 467 | 572 | 417 | 514 | 5.78e-20 | 94.7 |
| MS.gene65812.t1 | AT5G64170 | 46.226 | 106 | 49 | 1 | 467 | 572 | 467 | 564 | 7.34e-20 | 94.4 |
| MS.gene65812.t1 | AT5G64170 | 46.226 | 106 | 49 | 1 | 467 | 572 | 467 | 564 | 7.34e-20 | 94.4 |
Find 140 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAACTACGAAAAGATTTC+TGG | 0.141989 | 3.2:-9145578 | MS.gene65812:CDS |
| TTCAGCTTGCTAATATAATA+TGG | 0.167194 | 3.2:-9147014 | MS.gene65812:CDS |
| ATGATGTTCTGATATGTTTC+AGG | 0.210886 | 3.2:+9144419 | None:intergenic |
| TCATCTCCCTCTTCAATTCT+TGG | 0.243129 | 3.2:-9144464 | MS.gene65812:CDS |
| AGCAATGATGACCCTATATT+TGG | 0.245263 | 3.2:-9145770 | MS.gene65812:CDS |
| CATAGACCTGTGGAGTTAAC+AGG | 0.252015 | 3.2:-9142804 | MS.gene65812:CDS |
| CAAGTCCCACTGATGCTTTA+AGG | 0.257456 | 3.2:-9145664 | MS.gene65812:CDS |
| AGGCATCAGCATGTGCTCTC+TGG | 0.298254 | 3.2:-9144317 | MS.gene65812:CDS |
| AACCATATTGTGCAGGCTTC+AGG | 0.302174 | 3.2:-9143964 | MS.gene65812:CDS |
| TTCGTCTCTGTTTCAATATC+AGG | 0.327150 | 3.2:+9142861 | None:intergenic |
| GAATCATCTTGTTCAATTAG+AGG | 0.333648 | 3.2:+9144029 | None:intergenic |
| AGACTTGCATGGCCAAATAT+AGG | 0.334235 | 3.2:+9145758 | None:intergenic |
| AGTTTCAGTCAGGAAATCTT+AGG | 0.358237 | 3.2:-9144337 | MS.gene65812:CDS |
| TCAGGTCCTAGGAGTTGATT+TGG | 0.365895 | 3.2:+9144437 | None:intergenic |
| ACAAGAGGGGAAAGATTTGC+AGG | 0.375758 | 3.2:-9144564 | MS.gene65812:CDS |
| AGGAAATTATTCTGACAAAC+TGG | 0.382761 | 3.2:-9142784 | MS.gene65812:CDS |
| CATTGAGAGGCTTCAAGCTC+CGG | 0.383942 | 3.2:+9142549 | None:intergenic |
| ATCCTGAAGCCTGCACAATA+TGG | 0.385534 | 3.2:+9143962 | None:intergenic |
| CATCTCCCTCTTCAATTCTT+GGG | 0.389661 | 3.2:-9144463 | MS.gene65812:CDS |
| ATCAACAACTTTCTCACATT+GGG | 0.390601 | 3.2:-9142665 | MS.gene65812:CDS |
| AAGGAATAGATCAGGGCCTT+TGG | 0.396684 | 3.2:-9145645 | MS.gene65812:CDS |
| TCAGCTTGCTAATATAATAT+GGG | 0.399569 | 3.2:-9147013 | MS.gene65812:CDS |
| TGCCGATGAAGGTAAAGAAC+AGG | 0.402038 | 3.2:-9146432 | MS.gene65812:CDS |
| AAACAAGAAAGAAGTGAATC+AGG | 0.402238 | 3.2:-9146929 | MS.gene65812:CDS |
| AGTTCGAACCTTAACAATAA+TGG | 0.402335 | 3.2:-9146832 | MS.gene65812:CDS |
| GAGGCGGCGGCAGCAAATGC+AGG | 0.413237 | 3.2:-9144198 | MS.gene65812:CDS |
| TGTGTTAGCATTGGCATAGC+AGG | 0.424322 | 3.2:+9144359 | None:intergenic |
| GACTTGCATGGCCAAATATA+GGG | 0.428786 | 3.2:+9145759 | None:intergenic |
| TCAAAATCAGCTTTCGTCTC+GGG | 0.429670 | 3.2:+9146871 | None:intergenic |
| CAGGTCTATGAAAGAGTAAA+CGG | 0.431253 | 3.2:+9142817 | None:intergenic |
| GTTGTCCTCCATTATTGTTA+AGG | 0.431483 | 3.2:+9146824 | None:intergenic |
| TAAAACGAAGGTGCCACATA+TGG | 0.437704 | 3.2:+9144392 | None:intergenic |
| CTTAGCAAACTCGGTACATC+AGG | 0.438169 | 3.2:-9146694 | MS.gene65812:CDS |
| TTAAGATCTTCACTTGCCTC+TGG | 0.438774 | 3.2:+9146952 | None:intergenic |
| AAGAAAGCAGTAGCCAAAAC+AGG | 0.439156 | 3.2:-9143687 | MS.gene65812:intron |
| TCCTGAGGAGTCATAGTTTG+AGG | 0.439185 | 3.2:+9144236 | None:intergenic |
| CTAGAATGACTTTGAATTTG+TGG | 0.441648 | 3.2:+9144092 | None:intergenic |
| ACCCTGTTCTTTACCTTCAT+CGG | 0.444276 | 3.2:+9146430 | None:intergenic |
| TCAGAAACAACAGCAAGTAC+TGG | 0.445349 | 3.2:-9144162 | MS.gene65812:CDS |
| GGCATCAGCATGTGCTCTCT+GGG | 0.448646 | 3.2:-9144316 | MS.gene65812:CDS |
| ATCAAAATCAGCTTTCGTCT+CGG | 0.454688 | 3.2:+9146870 | None:intergenic |
| ACCTGCTGCTCGTGACCAAT+AGG | 0.454851 | 3.2:+9145482 | None:intergenic |
| GATGCTTTAAGGAATAGATC+AGG | 0.456030 | 3.2:-9145653 | MS.gene65812:CDS |
| GCATCAGAGATAGCTTGTTC+CGG | 0.460936 | 3.2:-9143801 | MS.gene65812:CDS |
| CTTAAAGCATCAGTGGGACT+TGG | 0.466899 | 3.2:+9145665 | None:intergenic |
| GTTTACTAGTGCAAGGAACT+TGG | 0.467995 | 3.2:+9144135 | None:intergenic |
| TCTTAGTCTGATCCATAGGT+TGG | 0.470108 | 3.2:+9142613 | None:intergenic |
| TTTACCTGAAAATCCGATCA+AGG | 0.472813 | 3.2:+9146363 | None:intergenic |
| CAGAGATAGCTTGTTCCGGC+TGG | 0.473135 | 3.2:-9143797 | MS.gene65812:CDS |
| CAGTGCAGCTAAAATTGATC+AGG | 0.475398 | 3.2:-9146755 | MS.gene65812:CDS |
| TAGAATGACTTTGAATTTGT+GGG | 0.479013 | 3.2:+9144093 | None:intergenic |
| ACGGGCGACAGTTCGATCAA+TGG | 0.480071 | 3.2:+9142836 | None:intergenic |
| TCTTCACTTGCCTCTGGAAA+CGG | 0.482423 | 3.2:+9146958 | None:intergenic |
| TTGAAGAAACCATATTGTGC+AGG | 0.486319 | 3.2:-9143971 | MS.gene65812:CDS |
| GCCTATTGGTCACGAGCAGC+AGG | 0.486485 | 3.2:-9145483 | MS.gene65812:intron |
| CTGTTCTTAGTCTGATCCAT+AGG | 0.489070 | 3.2:+9142609 | None:intergenic |
| TTATTAAGCTTACACACAGC+TGG | 0.490921 | 3.2:+9146904 | None:intergenic |
| TTGATAATTCTGATGACCTC+TGG | 0.501202 | 3.2:-9145736 | MS.gene65812:CDS |
| AATCAACAACTTTCTCACAT+TGG | 0.505289 | 3.2:-9142666 | MS.gene65812:CDS |
| TCTGATATGTTTCAGGTCCT+AGG | 0.507149 | 3.2:+9144426 | None:intergenic |
| GGGTGGCATATTTGAGCGAC+GGG | 0.507311 | 3.2:+9144113 | None:intergenic |
| GCGTTGCACTTTGTGCCAGC+CGG | 0.508304 | 3.2:+9143782 | None:intergenic |
| ATATGGGATGAGGGAGGTGA+GGG | 0.508521 | 3.2:-9146997 | MS.gene65812:CDS |
| TGCTAATATAATATGGGATG+AGG | 0.509213 | 3.2:-9147007 | MS.gene65812:CDS |
| ATTCAAAGTCATTCTAGTGA+TGG | 0.509606 | 3.2:-9144086 | MS.gene65812:CDS |
| TAATTTCCTGTTAACTCCAC+AGG | 0.509907 | 3.2:+9142798 | None:intergenic |
| GGAGATAGAAGTAAGCCTAT+TGG | 0.522652 | 3.2:-9145497 | MS.gene65812:CDS |
| GAACATCTTTCTTCATTGAG+AGG | 0.523735 | 3.2:+9142536 | None:intergenic |
| TTCAAAGTCATTCTAGTGAT+GGG | 0.526023 | 3.2:-9144085 | MS.gene65812:CDS |
| CAGAAACAACAGCAAGTACT+GGG | 0.527304 | 3.2:-9144161 | MS.gene65812:CDS |
| GCCTCAAACTATGACTCCTC+AGG | 0.528024 | 3.2:-9144237 | MS.gene65812:CDS |
| TGAGAGGCTTCAAGCTCCGG+TGG | 0.529498 | 3.2:+9142552 | None:intergenic |
| ATGCTAACACAGTTTCAGTC+AGG | 0.532527 | 3.2:-9144347 | MS.gene65812:CDS |
| AATGGAGGACAACTCGCCTC+AGG | 0.533027 | 3.2:-9146814 | MS.gene65812:CDS |
| ACACACAACCGCTGATAATG+TGG | 0.533964 | 3.2:-9145528 | MS.gene65812:CDS |
| TGTTCTTCTTTGATTTCCAA+AGG | 0.534602 | 3.2:+9145629 | None:intergenic |
| ACAGAAGAGACCACACAGAA+TGG | 0.537046 | 3.2:-9146479 | MS.gene65812:intron |
| CTCCTCTTGTAAGCACCTCA+CGG | 0.538906 | 3.2:+9142701 | None:intergenic |
| CGAGGTGAACTTAGCAAACT+CGG | 0.541278 | 3.2:-9146703 | MS.gene65812:CDS |
| GTGGGACTTGGTGTGTTCAA+TGG | 0.542667 | 3.2:+9145677 | None:intergenic |
| AAGAGACCACACAGAATGGA+AGG | 0.545204 | 3.2:-9146475 | MS.gene65812:CDS |
| GGGCAACCAAATCAACTCCT+AGG | 0.545576 | 3.2:-9144443 | MS.gene65812:CDS |
| AGGTCTATGAAAGAGTAAAC+GGG | 0.548734 | 3.2:+9142818 | None:intergenic |
| AATATGGGATGAGGGAGGTG+AGG | 0.553046 | 3.2:-9146998 | MS.gene65812:CDS |
| TCTGGGTATGAAACATCTGC+TGG | 0.554617 | 3.2:-9144299 | MS.gene65812:CDS |
| TCCTCTTGTAAGCACCTCAC+GGG | 0.556291 | 3.2:+9142702 | None:intergenic |
| TGGGTGGCATATTTGAGCGA+CGG | 0.557181 | 3.2:+9144112 | None:intergenic |
| GGAGTCGCACATTTCAACTA+AGG | 0.558889 | 3.2:-9142763 | MS.gene65812:CDS |
| ACCTCACGGGAAAGTTCACT+TGG | 0.559508 | 3.2:+9142715 | None:intergenic |
| TCCCGTGAGGTGCTTACAAG+AGG | 0.560420 | 3.2:-9142703 | MS.gene65812:CDS |
| TACTAGTGCAAGGAACTTGG+TGG | 0.564162 | 3.2:+9144138 | None:intergenic |
| ATAGGTTGGACCTCAAAAGA+TGG | 0.564515 | 3.2:+9142627 | None:intergenic |
| GATTATGACTGGGCTAACAT+AGG | 0.566174 | 3.2:-9146398 | MS.gene65812:CDS |
| ACAACTCGCCTCAGGATATG+TGG | 0.569743 | 3.2:-9146806 | MS.gene65812:CDS |
| GACTGAAACTGTGTTAGCAT+TGG | 0.570733 | 3.2:+9144350 | None:intergenic |
| TGTTTCAATATCAGGCATCC+TGG | 0.571701 | 3.2:+9142869 | None:intergenic |
| GCTGATAATGTGGAATGTGC+TGG | 0.572272 | 3.2:-9145518 | MS.gene65812:CDS |
| TTGGTCTTCTTCAGCAACAT+CGG | 0.578822 | 3.2:-9144528 | MS.gene65812:CDS |
| GAACATCATAAATCCATATG+TGG | 0.579709 | 3.2:-9144405 | MS.gene65812:CDS |
| AGTCCTTTGAAAAGTTATGC+GGG | 0.588913 | 3.2:-9144269 | MS.gene65812:CDS |
| GCTTCAGGATGTTATATCAA+AGG | 0.593187 | 3.2:-9143949 | MS.gene65812:intron |
| TTTACTCTTTCATAGACCTG+TGG | 0.593278 | 3.2:-9142814 | MS.gene65812:CDS |
| CAGAATTATCAAGACTTGCA+TGG | 0.593394 | 3.2:+9145747 | None:intergenic |
| GCTAATATAATATGGGATGA+GGG | 0.595943 | 3.2:-9147006 | MS.gene65812:CDS |
| AAAGTCAAAGATAAAACAAG+AGG | 0.596219 | 3.2:-9144579 | MS.gene65812:CDS |
| TGGTATCACACAGATATGCC+AGG | 0.598969 | 3.2:-9142887 | MS.gene65812:intron |
| TGGTTGCCCAAGAATTGAAG+AGG | 0.600589 | 3.2:+9144457 | None:intergenic |
| TCTATTCCTTAAAGCATCAG+TGG | 0.602291 | 3.2:+9145658 | None:intergenic |
| GAGTCCTTTGAAAAGTTATG+CGG | 0.609075 | 3.2:-9144270 | MS.gene65812:CDS |
| AGCATCCCTTCCATTCTGTG+TGG | 0.615267 | 3.2:+9146469 | None:intergenic |
| GTGTTAGCATTGGCATAGCA+GGG | 0.616825 | 3.2:+9144360 | None:intergenic |
| AAGTCAAAGATAAAACAAGA+GGG | 0.616841 | 3.2:-9144578 | MS.gene65812:CDS |
| ATGCTTTAAGGAATAGATCA+GGG | 0.618514 | 3.2:-9145652 | MS.gene65812:CDS |
| GGTTGCCCAAGAATTGAAGA+GGG | 0.618924 | 3.2:+9144458 | None:intergenic |
| TCATATTGTGCCGTTTCCAG+AGG | 0.620272 | 3.2:-9146968 | MS.gene65812:CDS |
| AGCAAACTCGGTACATCAGG+AGG | 0.624925 | 3.2:-9146691 | MS.gene65812:intron |
| CTATTCCTTAAAGCATCAGT+GGG | 0.628176 | 3.2:+9145659 | None:intergenic |
| GCGACGGGTTTACTAGTGCA+AGG | 0.628579 | 3.2:+9144128 | None:intergenic |
| TGGCACAAAGTGCAACGCAA+CGG | 0.633011 | 3.2:-9143777 | MS.gene65812:CDS |
| GGAGATGATTGTAACACAGA+AGG | 0.635671 | 3.2:+9144479 | None:intergenic |
| AGAAAATGCATCTAACCCAC+CGG | 0.636962 | 3.2:-9142568 | MS.gene65812:CDS |
| ACTAAGAACAGTCTCAGCAT+AGG | 0.640882 | 3.2:-9142597 | MS.gene65812:CDS |
| AGGAGTCATAGTTTGAGGCA+CGG | 0.641324 | 3.2:+9144241 | None:intergenic |
| GAGAGGCTTCAAGCTCCGGT+GGG | 0.642429 | 3.2:+9142553 | None:intergenic |
| AGCACATTCCACATTATCAG+CGG | 0.644887 | 3.2:+9145520 | None:intergenic |
| CTGTGTGTAAGCTTAATAAG+CGG | 0.656424 | 3.2:-9146900 | MS.gene65812:CDS |
| TCGAACCTTAACAATAATGG+AGG | 0.660791 | 3.2:-9146829 | MS.gene65812:CDS |
| AATATAATATGGGATGAGGG+AGG | 0.660916 | 3.2:-9147003 | MS.gene65812:CDS |
| ACTGAACTTTCTAAATATCG+AGG | 0.661650 | 3.2:-9146721 | MS.gene65812:CDS |
| GCCGATGAAGGTAAAGAACA+GGG | 0.663411 | 3.2:-9146431 | MS.gene65812:CDS |
| AGAGACCACACAGAATGGAA+GGG | 0.665511 | 3.2:-9146474 | MS.gene65812:CDS |
| AATGACTTTGAATTTGTGGG+TGG | 0.666637 | 3.2:+9144096 | None:intergenic |
| TGAGTTTGCCACATATCCTG+AGG | 0.676069 | 3.2:+9146798 | None:intergenic |
| AGTCAAAGATAAAACAAGAG+GGG | 0.681406 | 3.2:-9144577 | MS.gene65812:CDS |
| AAAAGTACCAGTTGAAAACA+CGG | 0.682824 | 3.2:-9144604 | MS.gene65812:CDS |
| TGGACCTCAAAAGATGGACA+AGG | 0.698672 | 3.2:+9142633 | None:intergenic |
| ACCAAGTGAACTTTCCCGTG+AGG | 0.703337 | 3.2:-9142716 | MS.gene65812:CDS |
| TCACATCTTTAGCAGACCAG+AGG | 0.711109 | 3.2:+9145720 | None:intergenic |
| GGGAGGTTACCATAAAACGA+AGG | 0.728180 | 3.2:+9144380 | None:intergenic |
| TTAGCATTGGCATAGCAGGG+AGG | 0.754765 | 3.2:+9144363 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAAAAAAAAAGTTC+CGG | - | chr3.2:9143675-9143694 | MS.gene65812:intron | 10.0% |
| !! | TATTAGATATAGAATAATAT+AGG | + | chr3.2:9143243-9143262 | None:intergenic | 10.0% |
| !!! | AGATTATCAAATAAATTTTA+TGG | + | chr3.2:9146340-9146359 | None:intergenic | 10.0% |
| !! | AAAATAACAGAATAAATTCT+TGG | + | chr3.2:9144926-9144945 | None:intergenic | 15.0% |
| !!! | CATTATTTTTCATATTATGA+CGG | + | chr3.2:9143021-9143040 | None:intergenic | 15.0% |
| !!! | TGGATATCAAATAAATTTTA+TGG | + | chr3.2:9146320-9146339 | None:intergenic | 15.0% |
| !! | AAAATCATTCAAAGTGAAAA+AGG | - | chr3.2:9143499-9143518 | MS.gene65812:intron | 20.0% |
| !! | AACATTTATACAATTAGGAA+TGG | + | chr3.2:9143071-9143090 | None:intergenic | 20.0% |
| !! | ATAAAAGTCTTGGATTTATT+TGG | - | chr3.2:9143299-9143318 | MS.gene65812:intron | 20.0% |
| !! | GTAAGATCCTAAATTTAAAA+TGG | + | chr3.2:9144561-9144580 | None:intergenic | 20.0% |
| !! | TGTCAAACATTTATACAATT+AGG | + | chr3.2:9143076-9143095 | None:intergenic | 20.0% |
| !! | TTCCAAAAGATAAACTTATT+GGG | - | chr3.2:9144339-9144358 | MS.gene65812:CDS | 20.0% |
| !! | TTTCCAAAAGATAAACTTAT+TGG | - | chr3.2:9144338-9144357 | MS.gene65812:CDS | 20.0% |
| !!! | AGTTTATCTTTTGGAAAATT+TGG | + | chr3.2:9144335-9144354 | None:intergenic | 20.0% |
| !!! | TAAATAAGAGTATAAGACAT+TGG | - | chr3.2:9146040-9146059 | MS.gene65812:intron | 20.0% |
| !!! | TCTGATACCATTTTAAATTT+AGG | - | chr3.2:9144551-9144570 | MS.gene65812:CDS | 20.0% |
| ! | AAAGTCAAAGATAAAACAAG+AGG | - | chr3.2:9144993-9145012 | MS.gene65812:intron | 25.0% |
| ! | AAGTCAAAGATAAAACAAGA+GGG | - | chr3.2:9144994-9145013 | MS.gene65812:intron | 25.0% |
| ! | AATATGTTCTATGTATTACC+AGG | + | chr3.2:9146125-9146144 | None:intergenic | 25.0% |
| ! | ACCAAAACAGTGTATATTAT+TGG | - | chr3.2:9146210-9146229 | MS.gene65812:intron | 25.0% |
| ! | ACTTACATTTACATCAGATT+CGG | - | chr3.2:9146391-9146410 | MS.gene65812:CDS | 25.0% |
| ! | AGAAAATTGAAAAATTGAGG+CGG | - | chr3.2:9145358-9145377 | MS.gene65812:intron | 25.0% |
| ! | AGGAGAAAATTGAAAAATTG+AGG | - | chr3.2:9145355-9145374 | MS.gene65812:intron | 25.0% |
| ! | CAGTATGATTACTTTATCTA+TGG | - | chr3.2:9146000-9146019 | MS.gene65812:intron | 25.0% |
| ! | CATTATGATCATAAAAGTCT+TGG | - | chr3.2:9143289-9143308 | MS.gene65812:intron | 25.0% |
| ! | GAAATATTATGAATCACTCT+TGG | + | chr3.2:9146070-9146089 | None:intergenic | 25.0% |
| ! | GTGATAAAATTGCTAATTAC+TGG | - | chr3.2:9142903-9142922 | MS.gene65812:intron | 25.0% |
| ! | TAAACTAGATAGCATAAACT+AGG | + | chr3.2:9144296-9144315 | None:intergenic | 25.0% |
| ! | TAACAGAATAAATTCTTGGA+TGG | + | chr3.2:9144922-9144941 | None:intergenic | 25.0% |
| ! | TAGAATGACTTTGAATTTGT+GGG | + | chr3.2:9145482-9145501 | None:intergenic | 25.0% |
| ! | TCTTATCTAGTTATCTTACA+AGG | + | chr3.2:9144405-9144424 | None:intergenic | 25.0% |
| ! | TGTGATCATTTAAACAACAA+AGG | + | chr3.2:9146488-9146507 | None:intergenic | 25.0% |
| ! | TTACTACTTAAACTAGGAAA+CGG | - | chr3.2:9143553-9143572 | MS.gene65812:intron | 25.0% |
| ! | TTATTGGAATTAAACTGACT+AGG | - | chr3.2:9146226-9146245 | MS.gene65812:intron | 25.0% |
| ! | TTGACACAATATTATGTCAA+GGG | + | chr3.2:9144873-9144892 | None:intergenic | 25.0% |
| ! | TTTCACAGGAATAAATTTGA+AGG | + | chr3.2:9143439-9143458 | None:intergenic | 25.0% |
| ! | TTTCCTAGTTTAAGTAGTAA+AGG | + | chr3.2:9143553-9143572 | None:intergenic | 25.0% |
| !! | AAAGATTTGCAGGATTTTTA+TGG | - | chr3.2:9145018-9145037 | MS.gene65812:intron | 25.0% |
| !! | AACCCAATAAGTTTATCTTT+TGG | + | chr3.2:9144344-9144363 | None:intergenic | 25.0% |
| !! | AGAAATCTTTTCGTAGTTAA+GGG | + | chr3.2:9143995-9144014 | None:intergenic | 25.0% |
| !! | ATACTTTATAAGCTCTTTTC+AGG | - | chr3.2:9144432-9144451 | MS.gene65812:CDS | 25.0% |
| !! | ATTGGGTTATCTTAGATTTT+GGG | - | chr3.2:9144356-9144375 | MS.gene65812:CDS | 25.0% |
| !! | ATTTTTCATATTATGACGGT+GGG | + | chr3.2:9143017-9143036 | None:intergenic | 25.0% |
| !! | GTACTAAGATCTTCAATTTT+AGG | + | chr3.2:9145519-9145538 | None:intergenic | 25.0% |
| !! | TATTGGGTTATCTTAGATTT+TGG | - | chr3.2:9144355-9144374 | MS.gene65812:CDS | 25.0% |
| !! | TATTTTTCATATTATGACGG+TGG | + | chr3.2:9143018-9143037 | None:intergenic | 25.0% |
| !! | TCCAATAATATACACTGTTT+TGG | + | chr3.2:9146214-9146233 | None:intergenic | 25.0% |
| !! | TTTTCTCAATAGATTATGAG+TGG | - | chr3.2:9144674-9144693 | MS.gene65812:intron | 25.0% |
| !!! | AACATATTGATTTTAGTACG+TGG | - | chr3.2:9146137-9146156 | MS.gene65812:intron | 25.0% |
| !!! | AATTTTTCAATTTTCTCCTG+AGG | + | chr3.2:9145354-9145373 | None:intergenic | 25.0% |
| !!! | TCAGCTTGCTAATATAATAT+GGG | - | chr3.2:9142559-9142578 | MS.gene65812:CDS | 25.0% |
| !!! | TCTATGGTTGATAATTTCAA+AGG | - | chr3.2:9146016-9146035 | MS.gene65812:intron | 25.0% |
| !!! | TGAAAATGGGTTTTACTATA+GGG | - | chr3.2:9146267-9146286 | MS.gene65812:intron | 25.0% |
| !!! | TTCAGCTTGCTAATATAATA+TGG | - | chr3.2:9142558-9142577 | MS.gene65812:CDS | 25.0% |
| AAACAAGAAAGAAGTGAATC+AGG | - | chr3.2:9142643-9142662 | MS.gene65812:CDS | 30.0% | |
| AACTAGGAAGCAATTATAGA+AGG | + | chr3.2:9144280-9144299 | None:intergenic | 30.0% | |
| AAGTGATGAATACAACAGTT+AGG | + | chr3.2:9143376-9143395 | None:intergenic | 30.0% | |
| AATCAACAACTTTCTCACAT+TGG | - | chr3.2:9146906-9146925 | MS.gene65812:CDS | 30.0% | |
| AATTGCATTTCAGCATCTTA+TGG | - | chr3.2:9144764-9144783 | MS.gene65812:intron | 30.0% | |
| ACTGAACTTTCTAAATATCG+AGG | - | chr3.2:9142851-9142870 | MS.gene65812:CDS | 30.0% | |
| ACTGTAAAAAAAGTTTGCCT+CGG | + | chr3.2:9145730-9145749 | None:intergenic | 30.0% | |
| AGACCTTTACTACTTAAACT+AGG | - | chr3.2:9143547-9143566 | MS.gene65812:intron | 30.0% | |
| AGGAAATTATTCTGACAAAC+TGG | - | chr3.2:9146788-9146807 | MS.gene65812:CDS | 30.0% | |
| AGTCAAAGATAAAACAAGAG+GGG | - | chr3.2:9144995-9145014 | MS.gene65812:intron | 30.0% | |
| AGTTCGAACCTTAACAATAA+TGG | - | chr3.2:9142740-9142759 | MS.gene65812:CDS | 30.0% | |
| ATAGGGACTAAACTGAAAAT+GGG | - | chr3.2:9146254-9146273 | MS.gene65812:intron | 30.0% | |
| ATCAACAACTTTCTCACATT+GGG | - | chr3.2:9146907-9146926 | MS.gene65812:CDS | 30.0% | |
| ATCTGAATCATACAGTCTAA+AGG | + | chr3.2:9144196-9144215 | None:intergenic | 30.0% | |
| ATGATGTTCTGATATGTTTC+AGG | + | chr3.2:9145156-9145175 | None:intergenic | 30.0% | |
| ATTCAAAGTCATTCTAGTGA+TGG | - | chr3.2:9145486-9145505 | MS.gene65812:CDS | 30.0% | |
| CAATTGTTTACTCTTTACTC+CGG | + | chr3.2:9143697-9143716 | None:intergenic | 30.0% | |
| CACATATAATGAAAGTCAAG+GGG | + | chr3.2:9143634-9143653 | None:intergenic | 30.0% | |
| CTAGAATGACTTTGAATTTG+TGG | + | chr3.2:9145483-9145502 | None:intergenic | 30.0% | |
| CTGTATGATTCAGATATGTT+AGG | - | chr3.2:9144201-9144220 | MS.gene65812:CDS | 30.0% | |
| CTTAACTACGAAAAGATTTC+TGG | - | chr3.2:9143994-9144013 | MS.gene65812:CDS | 30.0% | |
| CTTGACACAATATTATGTCA+AGG | + | chr3.2:9144874-9144893 | None:intergenic | 30.0% | |
| CTTGACATAATATTGTGTCA+AGG | - | chr3.2:9144872-9144891 | MS.gene65812:intron | 30.0% | |
| GAACATCATAAATCCATATG+TGG | - | chr3.2:9145167-9145186 | MS.gene65812:intron | 30.0% | |
| GAATCATCTTGTTCAATTAG+AGG | + | chr3.2:9145546-9145565 | None:intergenic | 30.0% | |
| GAATCTGATGTAAATGTAAG+TGG | + | chr3.2:9146392-9146411 | None:intergenic | 30.0% | |
| GCACATATAATGAAAGTCAA+GGG | + | chr3.2:9143635-9143654 | None:intergenic | 30.0% | |
| GCTAATATAATATGGGATGA+GGG | - | chr3.2:9142566-9142585 | MS.gene65812:CDS | 30.0% | |
| GTTTCCTTGCATACTAATTT+GGG | - | chr3.2:9145691-9145710 | MS.gene65812:CDS | 30.0% | |
| TAAGATGCTGAAATGCAATT+AGG | + | chr3.2:9144764-9144783 | None:intergenic | 30.0% | |
| TACTACTTAAACTAGGAAAC+GGG | - | chr3.2:9143554-9143573 | MS.gene65812:intron | 30.0% | |
| TAGAGAACTGAATAATAGAC+AGG | + | chr3.2:9144137-9144156 | None:intergenic | 30.0% | |
| TATCTAGTTATCTTACAAGG+CGG | + | chr3.2:9144402-9144421 | None:intergenic | 30.0% | |
| TCAGTTCTCTATTTGTATAG+TGG | - | chr3.2:9144146-9144165 | MS.gene65812:CDS | 30.0% | |
| TGAAGGAACTTAAACTAAGA+TGG | + | chr3.2:9143422-9143441 | None:intergenic | 30.0% | |
| TGAATTTCCGAAGTCTAAAA+TGG | - | chr3.2:9143335-9143354 | MS.gene65812:intron | 30.0% | |
| TGCTAATATAATATGGGATG+AGG | - | chr3.2:9142565-9142584 | MS.gene65812:CDS | 30.0% | |
| TGTTTCCTTGCATACTAATT+TGG | - | chr3.2:9145690-9145709 | MS.gene65812:CDS | 30.0% | |
| TTCAAAGTCATTCTAGTGAT+GGG | - | chr3.2:9145487-9145506 | MS.gene65812:CDS | 30.0% | |
| TTGTATGATCCAGATATGTT+AGG | - | chr3.2:9144227-9144246 | MS.gene65812:CDS | 30.0% | |
| ! | AAACTGACTAGGTTTTCATA+GGG | - | chr3.2:9146237-9146256 | MS.gene65812:intron | 30.0% |
| ! | AACACACTTAACAGTTTTAC+TGG | + | chr3.2:9146573-9146592 | None:intergenic | 30.0% |
| ! | AGTAGGTAGTATTTTACTGT+AGG | + | chr3.2:9145919-9145938 | None:intergenic | 30.0% |
| ! | CAGAAATCTTTTCGTAGTTA+AGG | + | chr3.2:9143996-9144015 | None:intergenic | 30.0% |
| ! | TAAACTGACTAGGTTTTCAT+AGG | - | chr3.2:9146236-9146255 | MS.gene65812:intron | 30.0% |
| ! | TAACTTTTCAAAGGACTCAA+CGG | + | chr3.2:9145300-9145319 | None:intergenic | 30.0% |
| ! | TCACACATTGACTATAAAGA+AGG | + | chr3.2:9144645-9144664 | None:intergenic | 30.0% |
| ! | TCACATTTTGTGACTAAAGT+AGG | - | chr3.2:9146503-9146522 | MS.gene65812:intron | 30.0% |
| ! | TGCAGGATTTTTATGGTAAT+TGG | - | chr3.2:9145025-9145044 | MS.gene65812:intron | 30.0% |
| ! | TGTTCTTCTTTGATTTCCAA+AGG | + | chr3.2:9143946-9143965 | None:intergenic | 30.0% |
| ! | TTAGTCTTTGTCTCTTACAA+CGG | - | chr3.2:9143739-9143758 | MS.gene65812:CDS | 30.0% |
| ! | TTTTATCAAAATGCCGATGA+AGG | - | chr3.2:9143129-9143148 | MS.gene65812:intron | 30.0% |
| !! | AAAAGTACCAGTTGAAAACA+CGG | - | chr3.2:9144968-9144987 | MS.gene65812:intron | 30.0% |
| !! | AAAAGTTGATGATTGTCAGT+GGG | - | chr3.2:9143597-9143616 | MS.gene65812:intron | 30.0% |
| !! | ATGCTTTAAGGAATAGATCA+GGG | - | chr3.2:9143920-9143939 | MS.gene65812:intron | 30.0% |
| !! | CTGAAAATGGGTTTTACTAT+AGG | - | chr3.2:9146266-9146285 | MS.gene65812:intron | 30.0% |
| !! | GAAAATGGGTTTTACTATAG+GGG | - | chr3.2:9146268-9146287 | MS.gene65812:intron | 30.0% |
| !! | TAAAAGTTGATGATTGTCAG+TGG | - | chr3.2:9143596-9143615 | MS.gene65812:intron | 30.0% |
| !! | TGATTTTAGTACGTGGAATA+AGG | - | chr3.2:9146144-9146163 | MS.gene65812:intron | 30.0% |
| !! | TGATTTTGCTGATTATGACT+GGG | - | chr3.2:9143164-9143183 | MS.gene65812:intron | 30.0% |
| AAATTGAAAAATTGAGGCGG+CGG | - | chr3.2:9145361-9145380 | MS.gene65812:intron | 35.0% | |
| AACAAGGATCAAAGTACGTT+TGG | - | chr3.2:9146181-9146200 | MS.gene65812:intron | 35.0% | |
| AATATAATATGGGATGAGGG+AGG | - | chr3.2:9142569-9142588 | MS.gene65812:CDS | 35.0% | |
| AATGACTTTGAATTTGTGGG+TGG | + | chr3.2:9145479-9145498 | None:intergenic | 35.0% | |
| AATTCTTACTCTTGCATGAG+AGG | + | chr3.2:9144717-9144736 | None:intergenic | 35.0% | |
| ACAAGGATCAAAGTACGTTT+GGG | - | chr3.2:9146182-9146201 | MS.gene65812:intron | 35.0% | |
| ACTACTTAAACTAGGAAACG+GGG | - | chr3.2:9143555-9143574 | MS.gene65812:intron | 35.0% | |
| AGAACTGAATAATAGACAGG+TGG | + | chr3.2:9144134-9144153 | None:intergenic | 35.0% | |
| AGCAATGATGACCCTATATT+TGG | - | chr3.2:9143802-9143821 | MS.gene65812:CDS | 35.0% | |
| AGGTCTATGAAAGAGTAAAC+GGG | + | chr3.2:9146757-9146776 | None:intergenic | 35.0% | |
| AGTTTACTTAGCCTAGCTAA+CGG | + | chr3.2:9146435-9146454 | None:intergenic | 35.0% | |
| AGTTTCAGTCAGGAAATCTT+AGG | - | chr3.2:9145235-9145254 | MS.gene65812:intron | 35.0% | |
| ATCAAAATCAGCTTTCGTCT+CGG | + | chr3.2:9142705-9142724 | None:intergenic | 35.0% | |
| ATTCTTACTCTTGCATGAGA+GGG | + | chr3.2:9144716-9144735 | None:intergenic | 35.0% | |
| ATTTCCAATGTTACCCATCA+TGG | + | chr3.2:9143658-9143677 | None:intergenic | 35.0% | |
| CAAGCATATGTCTGATAACA+TGG | - | chr3.2:9143263-9143282 | MS.gene65812:intron | 35.0% | |
| CAGAATTATCAAGACTTGCA+TGG | + | chr3.2:9143828-9143847 | None:intergenic | 35.0% | |
| CAGGTCTATGAAAGAGTAAA+CGG | + | chr3.2:9146758-9146777 | None:intergenic | 35.0% | |
| CATAGGGACTAAACTGAAAA+TGG | - | chr3.2:9146253-9146272 | MS.gene65812:intron | 35.0% | |
| CTGTAAAAAAAGTTTGCCTC+GGG | + | chr3.2:9145729-9145748 | None:intergenic | 35.0% | |
| CTGTGTGTAAGCTTAATAAG+CGG | - | chr3.2:9142672-9142691 | MS.gene65812:CDS | 35.0% | |
| CTTTATTGTTGCAGCTACAA+CGG | + | chr3.2:9143478-9143497 | None:intergenic | 35.0% | |
| GATGAATACAACAGTTAGGA+CGG | + | chr3.2:9143372-9143391 | None:intergenic | 35.0% | |
| GCTTCAGGATGTTATATCAA+AGG | - | chr3.2:9145623-9145642 | MS.gene65812:CDS | 35.0% | |
| GCTTTCTTCTCTTGCAAAAA+CGG | + | chr3.2:9145873-9145892 | None:intergenic | 35.0% | |
| GGACTAAAGTCAAAACAACA+AGG | - | chr3.2:9146165-9146184 | MS.gene65812:intron | 35.0% | |
| GGCACATATAATGAAAGTCA+AGG | + | chr3.2:9143636-9143655 | None:intergenic | 35.0% | |
| GTACGGGAAAACTAGTTATT+AGG | + | chr3.2:9146656-9146675 | None:intergenic | 35.0% | |
| GTCACAGTAATTGAAGTAGT+AGG | + | chr3.2:9145936-9145955 | None:intergenic | 35.0% | |
| GTTGTCCTCCATTATTGTTA+AGG | + | chr3.2:9142751-9142770 | None:intergenic | 35.0% | |
| TAATTTCCTGTTAACTCCAC+AGG | + | chr3.2:9146777-9146796 | None:intergenic | 35.0% | |
| TAGATGATTTACCGTTAGCT+AGG | - | chr3.2:9146421-9146440 | MS.gene65812:CDS | 35.0% | |
| TATAATGAAAGTCAAGGGGA+AGG | + | chr3.2:9143630-9143649 | None:intergenic | 35.0% | |
| TCATTATATGTGCCCATGAT+GGG | - | chr3.2:9143642-9143661 | MS.gene65812:intron | 35.0% | |
| TCGAACCTTAACAATAATGG+AGG | - | chr3.2:9142743-9142762 | MS.gene65812:CDS | 35.0% | |
| TGCTCATATTGAATCAATCC+TGG | - | chr3.2:9146104-9146123 | MS.gene65812:intron | 35.0% | |
| TTATTAAGCTTACACACAGC+TGG | + | chr3.2:9142671-9142690 | None:intergenic | 35.0% | |
| TTCATTATATGTGCCCATGA+TGG | - | chr3.2:9143641-9143660 | MS.gene65812:intron | 35.0% | |
| TTCGTCTCTGTTTCAATATC+AGG | + | chr3.2:9146714-9146733 | None:intergenic | 35.0% | |
| TTGAAGAAACCATATTGTGC+AGG | - | chr3.2:9145601-9145620 | MS.gene65812:CDS | 35.0% | |
| TTGTGACTAAAGTAGGACTT+CGG | - | chr3.2:9146510-9146529 | MS.gene65812:intron | 35.0% | |
| TTTACCTGAAAATCCGATCA+AGG | + | chr3.2:9143212-9143231 | None:intergenic | 35.0% | |
| TTTACTCTTTCATAGACCTG+TGG | - | chr3.2:9146758-9146777 | MS.gene65812:CDS | 35.0% | |
| TTTCCAATGTTACCCATCAT+GGG | + | chr3.2:9143657-9143676 | None:intergenic | 35.0% | |
| ! | AGTCCTTTGAAAAGTTATGC+GGG | - | chr3.2:9145303-9145322 | MS.gene65812:intron | 35.0% |
| ! | CATTGACTATAAAGAAGGCT+TGG | + | chr3.2:9144640-9144659 | None:intergenic | 35.0% |
| ! | CTATTCCTTAAAGCATCAGT+GGG | + | chr3.2:9143916-9143935 | None:intergenic | 35.0% |
| ! | GAGTCCTTTGAAAAGTTATG+CGG | - | chr3.2:9145302-9145321 | MS.gene65812:intron | 35.0% |
| ! | GTAGGTTTTCTAACCTGTTT+TGG | + | chr3.2:9145901-9145920 | None:intergenic | 35.0% |
| ! | GTGTTTTCAACTGGTACTTT+TGG | + | chr3.2:9144969-9144988 | None:intergenic | 35.0% |
| ! | GTTTGGTCCATTTTAGACTT+CGG | + | chr3.2:9143345-9143364 | None:intergenic | 35.0% |
| ! | TCTATTCCTTAAAGCATCAG+TGG | + | chr3.2:9143917-9143936 | None:intergenic | 35.0% |
| ! | TTGATAATTCTGATGACCTC+TGG | - | chr3.2:9143836-9143855 | MS.gene65812:intron | 35.0% |
| ! | TTTTCTATACTCTGACAAGC+AGG | + | chr3.2:9144021-9144040 | None:intergenic | 35.0% |
| !! | ACTTTTTCCGTGTTTTCAAC+TGG | + | chr3.2:9144978-9144997 | None:intergenic | 35.0% |
| !! | GAAGTTTTGATGACCTTGAT+CGG | - | chr3.2:9143196-9143215 | MS.gene65812:intron | 35.0% |
| !! | GATGCTTTAAGGAATAGATC+AGG | - | chr3.2:9143919-9143938 | MS.gene65812:intron | 35.0% |
| !! | GCTGATTTTGATGGAAAACT+AGG | - | chr3.2:9142713-9142732 | MS.gene65812:CDS | 35.0% |
| !! | GTGATTTTGCTGATTATGAC+TGG | - | chr3.2:9143163-9143182 | MS.gene65812:intron | 35.0% |
| AAGAAAGCAGTAGCCAAAAC+AGG | - | chr3.2:9145885-9145904 | MS.gene65812:intron | 40.0% | |
| ACCCTGTTCTTTACCTTCAT+CGG | + | chr3.2:9143145-9143164 | None:intergenic | 40.0% | |
| ACTAAGAACAGTCTCAGCAT+AGG | - | chr3.2:9146975-9146994 | MS.gene65812:CDS | 40.0% | |
| AGAAAATGCATCTAACCCAC+CGG | - | chr3.2:9147004-9147023 | MS.gene65812:CDS | 40.0% | |
| AGACAGGTTCCTAACATATC+TGG | + | chr3.2:9144239-9144258 | None:intergenic | 40.0% | |
| AGACTTGCATGGCCAAATAT+AGG | + | chr3.2:9143817-9143836 | None:intergenic | 40.0% | |
| AGCACATTCCACATTATCAG+CGG | + | chr3.2:9144055-9144074 | None:intergenic | 40.0% | |
| AGCTAGGCTAAGTAAACTGT+TGG | - | chr3.2:9146437-9146456 | MS.gene65812:CDS | 40.0% | |
| ATATCTGTGTGATACCAGCA+TGG | + | chr3.2:9146682-9146701 | None:intergenic | 40.0% | |
| ATGCTAACACAGTTTCAGTC+AGG | - | chr3.2:9145225-9145244 | MS.gene65812:intron | 40.0% | |
| ATGTCCAACACTATTGGTGA+GGG | - | chr3.2:9144507-9144526 | MS.gene65812:CDS | 40.0% | |
| CAGAAACAACAGCAAGTACT+GGG | - | chr3.2:9145411-9145430 | MS.gene65812:intron | 40.0% | |
| CAGTGCAGCTAAAATTGATC+AGG | - | chr3.2:9142817-9142836 | MS.gene65812:CDS | 40.0% | |
| CATCTCCCTCTTCAATTCTT+GGG | - | chr3.2:9145109-9145128 | MS.gene65812:intron | 40.0% | |
| CTGCACAAACAAAAACGCAT+AGG | + | chr3.2:9142960-9142979 | None:intergenic | 40.0% | |
| CTGTTCTTAGTCTGATCCAT+AGG | + | chr3.2:9146966-9146985 | None:intergenic | 40.0% | |
| CTTGCATACTAATTTGGGCA+CGG | - | chr3.2:9145696-9145715 | MS.gene65812:CDS | 40.0% | |
| GACTGAAACTGTGTTAGCAT+TGG | + | chr3.2:9145225-9145244 | None:intergenic | 40.0% | |
| GACTTGCATGGCCAAATATA+GGG | + | chr3.2:9143816-9143835 | None:intergenic | 40.0% | |
| GATGCTGAAATGCAATTAGG+AGG | + | chr3.2:9144761-9144780 | None:intergenic | 40.0% | |
| GATTATGACTGGGCTAACAT+AGG | - | chr3.2:9143174-9143193 | MS.gene65812:intron | 40.0% | |
| GCAAAGTGAGCAAAATAGAC+AGG | + | chr3.2:9144255-9144274 | None:intergenic | 40.0% | |
| GGAGATAGAAGTAAGCCTAT+TGG | - | chr3.2:9144075-9144094 | MS.gene65812:CDS | 40.0% | |
| GGAGATGATTGTAACACAGA+AGG | + | chr3.2:9145096-9145115 | None:intergenic | 40.0% | |
| GTTTACTAGTGCAAGGAACT+TGG | + | chr3.2:9145440-9145459 | None:intergenic | 40.0% | |
| TCAAAATCAGCTTTCGTCTC+GGG | + | chr3.2:9142704-9142723 | None:intergenic | 40.0% | |
| TCAAACAGATTGCACACAGA+AGG | + | chr3.2:9144815-9144834 | None:intergenic | 40.0% | |
| TCAGAAACAACAGCAAGTAC+TGG | - | chr3.2:9145410-9145429 | MS.gene65812:intron | 40.0% | |
| TCATCTCCCTCTTCAATTCT+TGG | - | chr3.2:9145108-9145127 | MS.gene65812:intron | 40.0% | |
| TCTTAGTCTGATCCATAGGT+TGG | + | chr3.2:9146962-9146981 | None:intergenic | 40.0% | |
| TGTTTCAATATCAGGCATCC+TGG | + | chr3.2:9146706-9146725 | None:intergenic | 40.0% | |
| TTAAGATCTTCACTTGCCTC+TGG | + | chr3.2:9142623-9142642 | None:intergenic | 40.0% | |
| ! | ATAGGTTGGACCTCAAAAGA+TGG | + | chr3.2:9146948-9146967 | None:intergenic | 40.0% |
| ! | ATGACCTTGATCGGATTTTC+AGG | - | chr3.2:9143205-9143224 | MS.gene65812:intron | 40.0% |
| ! | CAATAGTGTTGGACATGAAC+GGG | + | chr3.2:9144503-9144522 | None:intergenic | 40.0% |
| ! | CCAATAGTGTTGGACATGAA+CGG | + | chr3.2:9144504-9144523 | None:intergenic | 40.0% |
| ! | GAATCCTTGTCCATCTTTTG+AGG | - | chr3.2:9146935-9146954 | MS.gene65812:CDS | 40.0% |
| ! | GGCTAAGTAAACTGTTGGTT+CGG | - | chr3.2:9146442-9146461 | MS.gene65812:CDS | 40.0% |
| ! | TATCTTACAAGGCGGTTTTG+TGG | + | chr3.2:9144394-9144413 | None:intergenic | 40.0% |
| ! | TATGTGGCACCTTCGTTTTA+TGG | - | chr3.2:9145183-9145202 | MS.gene65812:intron | 40.0% |
| ! | TCTGATATGTTTCAGGTCCT+AGG | + | chr3.2:9145149-9145168 | None:intergenic | 40.0% |
| ! | TTGGTCTTCTTCAGCAACAT+CGG | - | chr3.2:9145044-9145063 | MS.gene65812:intron | 40.0% |
| !! | ATCTTACAAGGCGGTTTTGT+GGG | + | chr3.2:9144393-9144412 | None:intergenic | 40.0% |
| !! | ATTCTTGGATGGCTTTGAGA+AGG | + | chr3.2:9144911-9144930 | None:intergenic | 40.0% |
| !! | CTATGCGTTTTTGTTTGTGC+AGG | - | chr3.2:9142958-9142977 | MS.gene65812:intron | 40.0% |
| !! | GAGACGAAAGCTGATTTTGA+TGG | - | chr3.2:9142704-9142723 | MS.gene65812:CDS | 40.0% |
| !! | GCTAAGTAAACTGTTGGTTC+GGG | - | chr3.2:9146443-9146462 | MS.gene65812:CDS | 40.0% |
| !! | TAAAACGAAGGTGCCACATA+TGG | + | chr3.2:9145183-9145202 | None:intergenic | 40.0% |
| !!! | ATCTTTTGAGGTCCAACCTA+TGG | - | chr3.2:9146947-9146966 | MS.gene65812:CDS | 40.0% |
| !!! | CTGATCAATTTTAGCTGCAC+TGG | + | chr3.2:9142819-9142838 | None:intergenic | 40.0% |
| AAAGCCCTCACCAATAGTGT+TGG | + | chr3.2:9144514-9144533 | None:intergenic | 45.0% | |
| AACCATATTGTGCAGGCTTC+AGG | - | chr3.2:9145608-9145627 | MS.gene65812:CDS | 45.0% | |
| AAGAGACCACACAGAATGGA+AGG | - | chr3.2:9143097-9143116 | MS.gene65812:intron | 45.0% | |
| AAGGAATAGATCAGGGCCTT+TGG | - | chr3.2:9143927-9143946 | MS.gene65812:intron | 45.0% | |
| ACAAGAGGGGAAAGATTTGC+AGG | - | chr3.2:9145008-9145027 | MS.gene65812:intron | 45.0% | |
| ACAGAAGAGACCACACAGAA+TGG | - | chr3.2:9143093-9143112 | MS.gene65812:intron | 45.0% | |
| ACATGTTGACAGCGCAATCA+AGG | + | chr3.2:9146630-9146649 | None:intergenic | 45.0% | |
| AGAGACCACACAGAATGGAA+GGG | - | chr3.2:9143098-9143117 | MS.gene65812:intron | 45.0% | |
| ATCCTGAAGCCTGCACAATA+TGG | + | chr3.2:9145613-9145632 | None:intergenic | 45.0% | |
| CAAGTCCCACTGATGCTTTA+AGG | - | chr3.2:9143908-9143927 | MS.gene65812:intron | 45.0% | |
| CATAGACCTGTGGAGTTAAC+AGG | - | chr3.2:9146768-9146787 | MS.gene65812:CDS | 45.0% | |
| CATGTCCAACACTATTGGTG+AGG | - | chr3.2:9144506-9144525 | MS.gene65812:CDS | 45.0% | |
| CCGTTCATGTCCAACACTAT+TGG | - | chr3.2:9144501-9144520 | MS.gene65812:CDS | 45.0% | |
| CGAGGTGAACTTAGCAAACT+CGG | - | chr3.2:9142869-9142888 | MS.gene65812:CDS | 45.0% | |
| CGTGCCCAAATTAGTATGCA+AGG | + | chr3.2:9145698-9145717 | None:intergenic | 45.0% | |
| CTTAGCAAACTCGGTACATC+AGG | - | chr3.2:9142878-9142897 | MS.gene65812:intron | 45.0% | |
| GCCGATGAAGGTAAAGAACA+GGG | - | chr3.2:9143141-9143160 | MS.gene65812:intron | 45.0% | |
| GGAGTCGCACATTTCAACTA+AGG | - | chr3.2:9146809-9146828 | MS.gene65812:CDS | 45.0% | |
| GGGAGGTTACCATAAAACGA+AGG | + | chr3.2:9145195-9145214 | None:intergenic | 45.0% | |
| GGTTGCCCAAGAATTGAAGA+GGG | + | chr3.2:9145117-9145136 | None:intergenic | 45.0% | |
| TACTAGTGCAAGGAACTTGG+TGG | + | chr3.2:9145437-9145456 | None:intergenic | 45.0% | |
| TAGCTGCACATAGGTTTCAC+AGG | + | chr3.2:9143453-9143472 | None:intergenic | 45.0% | |
| TCACATCTTTAGCAGACCAG+AGG | + | chr3.2:9143855-9143874 | None:intergenic | 45.0% | |
| TCCTGAGGAGTCATAGTTTG+AGG | + | chr3.2:9145339-9145358 | None:intergenic | 45.0% | |
| TCTGGGTATGAAACATCTGC+TGG | - | chr3.2:9145273-9145292 | MS.gene65812:intron | 45.0% | |
| TGAGTTTGCCACATATCCTG+AGG | + | chr3.2:9142777-9142796 | None:intergenic | 45.0% | |
| TGATACCAGCATGGTACGTA+CGG | + | chr3.2:9146673-9146692 | None:intergenic | 45.0% | |
| TGCCGATGAAGGTAAAGAAC+AGG | - | chr3.2:9143140-9143159 | MS.gene65812:intron | 45.0% | |
| TGGACCTCAAAAGATGGACA+AGG | + | chr3.2:9146942-9146961 | None:intergenic | 45.0% | |
| TGGTATCACACAGATATGCC+AGG | - | chr3.2:9146685-9146704 | MS.gene65812:intron | 45.0% | |
| TGGTTGCCCAAGAATTGAAG+AGG | + | chr3.2:9145118-9145137 | None:intergenic | 45.0% | |
| ! | ACACACAACCGCTGATAATG+TGG | - | chr3.2:9144044-9144063 | MS.gene65812:CDS | 45.0% |
| ! | AGGAGTCATAGTTTGAGGCA+CGG | + | chr3.2:9145334-9145353 | None:intergenic | 45.0% |
| ! | CTTAAAGCATCAGTGGGACT+TGG | + | chr3.2:9143910-9143929 | None:intergenic | 45.0% |
| ! | GAGCCCGCATAACTTTTCAA+AGG | + | chr3.2:9145309-9145328 | None:intergenic | 45.0% |
| ! | GCTGATAATGTGGAATGTGC+TGG | - | chr3.2:9144054-9144073 | MS.gene65812:CDS | 45.0% |
| ! | GGTGAGGGCTTTATGAATCT+AGG | - | chr3.2:9144522-9144541 | MS.gene65812:CDS | 45.0% |
| ! | TCAGGTCCTAGGAGTTGATT+TGG | + | chr3.2:9145138-9145157 | None:intergenic | 45.0% |
| ! | TCTTCACTTGCCTCTGGAAA+CGG | + | chr3.2:9142617-9142636 | None:intergenic | 45.0% |
| !! | CGGTTTTGTGGGATTGAGTT+AGG | + | chr3.2:9144382-9144401 | None:intergenic | 45.0% |
| !! | GCATCAGAGATAGCTTGTTC+CGG | - | chr3.2:9145771-9145790 | MS.gene65812:CDS | 45.0% |
| !! | GTGTTAGCATTGGCATAGCA+GGG | + | chr3.2:9145215-9145234 | None:intergenic | 45.0% |
| !! | TCATATTGTGCCGTTTCCAG+AGG | - | chr3.2:9142604-9142623 | MS.gene65812:CDS | 45.0% |
| !! | TGTGTTAGCATTGGCATAGC+AGG | + | chr3.2:9145216-9145235 | None:intergenic | 45.0% |
| AATATGGGATGAGGGAGGTG+AGG | - | chr3.2:9142574-9142593 | MS.gene65812:CDS | 50.0% | |
| ACAACGGCATAGCTGCACAT+AGG | + | chr3.2:9143462-9143481 | None:intergenic | 50.0% | |
| ACAACTCGCCTCAGGATATG+TGG | - | chr3.2:9142766-9142785 | MS.gene65812:CDS | 50.0% | |
| ACAGTTAGGACGGCAGAGTT+TGG | + | chr3.2:9143362-9143381 | None:intergenic | 50.0% | |
| ACCAAGTGAACTTTCCCGTG+AGG | - | chr3.2:9146856-9146875 | MS.gene65812:CDS | 50.0% | |
| ACCTCACGGGAAAGTTCACT+TGG | + | chr3.2:9146860-9146879 | None:intergenic | 50.0% | |
| AGCAAACTCGGTACATCAGG+AGG | - | chr3.2:9142881-9142900 | MS.gene65812:intron | 50.0% | |
| AGCATCCCTCACCTACAAGT+CGG | + | chr3.2:9144598-9144617 | None:intergenic | 50.0% | |
| AGCATCCCTTCCATTCTGTG+TGG | + | chr3.2:9143106-9143125 | None:intergenic | 50.0% | |
| ATATGGGATGAGGGAGGTGA+GGG | - | chr3.2:9142575-9142594 | MS.gene65812:CDS | 50.0% | |
| CATTGAGAGGCTTCAAGCTC+CGG | + | chr3.2:9147026-9147045 | None:intergenic | 50.0% | |
| CTCCTCTTGTAAGCACCTCA+CGG | + | chr3.2:9146874-9146893 | None:intergenic | 50.0% | |
| GATACCAGCATGGTACGTAC+GGG | + | chr3.2:9146672-9146691 | None:intergenic | 50.0% | |
| GCCTCAAACTATGACTCCTC+AGG | - | chr3.2:9145335-9145354 | MS.gene65812:intron | 50.0% | |
| GGGCAACCAAATCAACTCCT+AGG | - | chr3.2:9145129-9145148 | MS.gene65812:intron | 50.0% | |
| TCCTCTTGTAAGCACCTCAC+GGG | + | chr3.2:9146873-9146892 | None:intergenic | 50.0% | |
| TGGCACAAAGTGCAACGCAA+CGG | - | chr3.2:9145795-9145814 | MS.gene65812:intron | 50.0% | |
| TGGGTGGCATATTTGAGCGA+CGG | + | chr3.2:9145463-9145482 | None:intergenic | 50.0% | |
| ! | CACCTACAAGTCGGTTTCGT+GGG | + | chr3.2:9144589-9144608 | None:intergenic | 50.0% |
| ! | TCACCTACAAGTCGGTTTCG+TGG | + | chr3.2:9144590-9144609 | None:intergenic | 50.0% |
| ! | TTTTCCCGTACGTACCATGC+TGG | - | chr3.2:9146665-9146684 | MS.gene65812:intron | 50.0% |
| !! | AACCCACGAAACCGACTTGT+AGG | - | chr3.2:9144584-9144603 | MS.gene65812:CDS | 50.0% |
| !! | ACGAAACCGACTTGTAGGTG+AGG | - | chr3.2:9144589-9144608 | MS.gene65812:CDS | 50.0% |
| !! | CGAAACCGACTTGTAGGTGA+GGG | - | chr3.2:9144590-9144609 | MS.gene65812:CDS | 50.0% |
| !! | GTGCCCATGATGGGTAACAT+TGG | - | chr3.2:9143651-9143670 | MS.gene65812:intron | 50.0% |
| !! | GTGGGACTTGGTGTGTTCAA+TGG | + | chr3.2:9143898-9143917 | None:intergenic | 50.0% |
| !! | TTAGCATTGGCATAGCAGGG+AGG | + | chr3.2:9145212-9145231 | None:intergenic | 50.0% |
| AATGGAGGACAACTCGCCTC+AGG | - | chr3.2:9142758-9142777 | MS.gene65812:CDS | 55.0% | |
| ACCTGCTGCTCGTGACCAAT+AGG | + | chr3.2:9144093-9144112 | None:intergenic | 55.0% | |
| ACGGGCGACAGTTCGATCAA+TGG | + | chr3.2:9146739-9146758 | None:intergenic | 55.0% | |
| AGGCATCAGCATGTGCTCTC+TGG | - | chr3.2:9145255-9145274 | MS.gene65812:intron | 55.0% | |
| GGCATCAGCATGTGCTCTCT+GGG | - | chr3.2:9145256-9145275 | MS.gene65812:intron | 55.0% | |
| GGGTGGCATATTTGAGCGAC+GGG | + | chr3.2:9145462-9145481 | None:intergenic | 55.0% | |
| ! | GCGACGGGTTTACTAGTGCA+AGG | + | chr3.2:9145447-9145466 | None:intergenic | 55.0% |
| ! | TCCCGTGAGGTGCTTACAAG+AGG | - | chr3.2:9146869-9146888 | MS.gene65812:CDS | 55.0% |
| !! | CAGAGATAGCTTGTTCCGGC+TGG | - | chr3.2:9145775-9145794 | MS.gene65812:intron | 55.0% |
| !! | TTGGTTCGGGCTGTGCAGAA+TGG | - | chr3.2:9146456-9146475 | MS.gene65812:CDS | 55.0% |
| GAGAGGCTTCAAGCTCCGGT+GGG | + | chr3.2:9147022-9147041 | None:intergenic | 60.0% | |
| GCCTATTGGTCACGAGCAGC+AGG | - | chr3.2:9144089-9144108 | MS.gene65812:CDS | 60.0% | |
| GCGTTGCACTTTGTGCCAGC+CGG | + | chr3.2:9145793-9145812 | None:intergenic | 60.0% | |
| TGAGAGGCTTCAAGCTCCGG+TGG | + | chr3.2:9147023-9147042 | None:intergenic | 60.0% | |
| TGGGCACGGCTTCAATCCCG+AGG | - | chr3.2:9145710-9145729 | MS.gene65812:CDS | 65.0% | |
| GAGGCGGCGGCAGCAAATGC+AGG | - | chr3.2:9145374-9145393 | MS.gene65812:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 9142548 | 9147046 | 9142548 | ID=MS.gene65812 |
| chr3.2 | mRNA | 9142548 | 9147046 | 9142548 | ID=MS.gene65812.t1;Parent=MS.gene65812 |
| chr3.2 | exon | 9146692 | 9147046 | 9146692 | ID=MS.gene65812.t1.exon1;Parent=MS.gene65812.t1 |
| chr3.2 | CDS | 9146692 | 9147046 | 9146692 | ID=cds.MS.gene65812.t1;Parent=MS.gene65812.t1 |
| chr3.2 | exon | 9146368 | 9146497 | 9146368 | ID=MS.gene65812.t1.exon2;Parent=MS.gene65812.t1 |
| chr3.2 | CDS | 9146368 | 9146497 | 9146368 | ID=cds.MS.gene65812.t1;Parent=MS.gene65812.t1 |
| chr3.2 | exon | 9145484 | 9145790 | 9145484 | ID=MS.gene65812.t1.exon3;Parent=MS.gene65812.t1 |
| chr3.2 | CDS | 9145484 | 9145790 | 9145484 | ID=cds.MS.gene65812.t1;Parent=MS.gene65812.t1 |
| chr3.2 | exon | 9143950 | 9144636 | 9143950 | ID=MS.gene65812.t1.exon4;Parent=MS.gene65812.t1 |
| chr3.2 | CDS | 9143950 | 9144636 | 9143950 | ID=cds.MS.gene65812.t1;Parent=MS.gene65812.t1 |
| chr3.2 | exon | 9143688 | 9143845 | 9143688 | ID=MS.gene65812.t1.exon5;Parent=MS.gene65812.t1 |
| chr3.2 | CDS | 9143688 | 9143845 | 9143688 | ID=cds.MS.gene65812.t1;Parent=MS.gene65812.t1 |
| chr3.2 | exon | 9142548 | 9142896 | 9142548 | ID=MS.gene65812.t1.exon6;Parent=MS.gene65812.t1 |
| chr3.2 | CDS | 9142548 | 9142896 | 9142548 | ID=cds.MS.gene65812.t1;Parent=MS.gene65812.t1 |
| Gene Sequence |
| Protein sequence |
