Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051586.t1 | XP_003588978.1 | 95.3 | 551 | 26 | 0 | 1 | 551 | 1 | 551 | 0.00E+00 | 1109 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051586.t1 | Q43866 | 54.9 | 552 | 237 | 6 | 2 | 544 | 34 | 582 | 1.8e-176 | 620.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051586.t1 | G7I9W8 | 95.3 | 551 | 26 | 0 | 1 | 551 | 1 | 551 | 0.0e+00 | 1109.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051586 | MS.gene64855 | 0.832187 | 1.09E-55 | -1.69E-46 |
| MS.gene051586 | MS.gene65297 | 0.840792 | 7.02E-58 | -1.69E-46 |
| MS.gene051586 | MS.gene65364 | 0.813343 | 2.69E-51 | -1.69E-46 |
| MS.gene051586 | MS.gene68355 | 0.83019 | 3.38E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051586.t1 | MTR_1g015970 | 95.281 | 551 | 26 | 0 | 1 | 551 | 1 | 551 | 0.0 | 1108 |
| MS.gene051586.t1 | MTR_1g015980 | 80.541 | 555 | 100 | 5 | 1 | 548 | 1 | 554 | 0.0 | 918 |
| MS.gene051586.t1 | MTR_1g015910 | 75.556 | 540 | 130 | 2 | 13 | 551 | 39 | 577 | 0.0 | 868 |
| MS.gene051586.t1 | MTR_1g015910 | 75.530 | 519 | 125 | 2 | 34 | 551 | 17 | 534 | 0.0 | 834 |
| MS.gene051586.t1 | MTR_1g015940 | 84.091 | 440 | 47 | 1 | 49 | 488 | 54 | 470 | 0.0 | 768 |
| MS.gene051586.t1 | MTR_2g099950 | 53.731 | 536 | 238 | 5 | 14 | 545 | 42 | 571 | 0.0 | 595 |
| MS.gene051586.t1 | MTR_8g017410 | 54.120 | 534 | 238 | 4 | 16 | 545 | 44 | 574 | 0.0 | 595 |
| MS.gene051586.t1 | MTR_5g066380 | 51.476 | 542 | 248 | 8 | 14 | 543 | 33 | 571 | 0.0 | 580 |
| MS.gene051586.t1 | MTR_7g105050 | 49.536 | 539 | 268 | 3 | 9 | 545 | 37 | 573 | 0.0 | 563 |
| MS.gene051586.t1 | MTR_8g017410 | 53.295 | 516 | 234 | 4 | 34 | 545 | 16 | 528 | 0.0 | 562 |
| MS.gene051586.t1 | MTR_2g099950 | 53.033 | 511 | 233 | 4 | 39 | 545 | 1 | 508 | 0.0 | 560 |
| MS.gene051586.t1 | MTR_1g059700 | 49.432 | 528 | 259 | 5 | 19 | 543 | 43 | 565 | 0.0 | 545 |
| MS.gene051586.t1 | MTR_4g101630 | 44.821 | 531 | 276 | 8 | 20 | 543 | 112 | 632 | 1.87e-151 | 449 |
| MS.gene051586.t1 | MTR_8g017410 | 55.764 | 373 | 159 | 3 | 16 | 384 | 44 | 414 | 4.10e-150 | 437 |
| MS.gene051586.t1 | MTR_3g008530 | 44.106 | 526 | 284 | 6 | 20 | 543 | 104 | 621 | 4.50e-148 | 440 |
| MS.gene051586.t1 | MTR_4g101630 | 43.738 | 519 | 275 | 8 | 32 | 543 | 12 | 520 | 2.14e-143 | 424 |
| MS.gene051586.t1 | MTR_1g015920 | 57.831 | 83 | 32 | 2 | 251 | 333 | 34 | 113 | 2.15e-24 | 98.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051586.t1 | AT3G13790 | 54.792 | 553 | 238 | 6 | 2 | 545 | 34 | 583 | 0.0 | 616 |
| MS.gene051586.t1 | AT1G55120 | 53.803 | 539 | 238 | 5 | 17 | 545 | 36 | 573 | 0.0 | 609 |
| MS.gene051586.t1 | AT3G13790 | 54.250 | 553 | 238 | 7 | 2 | 545 | 34 | 580 | 0.0 | 604 |
| MS.gene051586.t1 | AT5G11920 | 52.720 | 533 | 244 | 6 | 20 | 547 | 17 | 546 | 0.0 | 579 |
| MS.gene051586.t1 | AT3G13784 | 52.110 | 545 | 249 | 7 | 7 | 543 | 31 | 571 | 0.0 | 578 |
| MS.gene051586.t1 | AT1G55120 | 52.372 | 527 | 240 | 5 | 29 | 545 | 8 | 533 | 0.0 | 573 |
| MS.gene051586.t1 | AT3G13784 | 51.743 | 545 | 251 | 7 | 7 | 543 | 31 | 571 | 0.0 | 571 |
| MS.gene051586.t1 | AT3G13790 | 54.651 | 516 | 222 | 6 | 39 | 545 | 1 | 513 | 0.0 | 570 |
| MS.gene051586.t1 | AT3G13790 | 54.651 | 516 | 222 | 6 | 39 | 545 | 1 | 513 | 0.0 | 570 |
| MS.gene051586.t1 | AT3G13790 | 54.651 | 516 | 222 | 6 | 39 | 545 | 1 | 513 | 0.0 | 570 |
| MS.gene051586.t1 | AT3G13784 | 51.560 | 545 | 249 | 8 | 7 | 543 | 31 | 568 | 0.0 | 566 |
| MS.gene051586.t1 | AT1G55120 | 52.216 | 519 | 237 | 5 | 37 | 545 | 17 | 534 | 0.0 | 565 |
| MS.gene051586.t1 | AT1G55120 | 52.115 | 520 | 238 | 5 | 36 | 545 | 40 | 558 | 0.0 | 565 |
| MS.gene051586.t1 | AT5G11920 | 52.140 | 514 | 238 | 6 | 39 | 547 | 1 | 511 | 0.0 | 546 |
| MS.gene051586.t1 | AT3G13784 | 50.962 | 520 | 244 | 6 | 32 | 543 | 2 | 518 | 0.0 | 542 |
| MS.gene051586.t1 | AT2G36190 | 47.948 | 536 | 265 | 5 | 19 | 542 | 49 | 582 | 5.57e-179 | 517 |
| MS.gene051586.t1 | AT3G52600 | 47.890 | 545 | 268 | 7 | 12 | 542 | 39 | 581 | 5.12e-178 | 515 |
| MS.gene051586.t1 | AT3G52600 | 47.701 | 522 | 258 | 6 | 34 | 542 | 8 | 527 | 1.23e-169 | 491 |
| MS.gene051586.t1 | AT3G52600 | 47.389 | 517 | 257 | 6 | 39 | 542 | 1 | 515 | 5.49e-166 | 482 |
| MS.gene051586.t1 | AT5G11920 | 54.987 | 391 | 169 | 5 | 20 | 405 | 17 | 405 | 2.04e-154 | 449 |
| MS.gene051586.t1 | AT1G12240 | 42.144 | 541 | 299 | 9 | 11 | 543 | 114 | 648 | 6.59e-142 | 425 |
| MS.gene051586.t1 | AT1G62660 | 41.111 | 540 | 305 | 9 | 11 | 543 | 99 | 632 | 1.36e-134 | 405 |
| MS.gene051586.t1 | AT1G62660 | 40.270 | 519 | 295 | 9 | 34 | 543 | 22 | 534 | 1.08e-125 | 379 |
| MS.gene051586.t1 | AT1G62660 | 38.445 | 463 | 272 | 8 | 90 | 543 | 8 | 466 | 6.05e-102 | 316 |
| MS.gene051586.t1 | AT1G62660 | 38.445 | 463 | 272 | 8 | 90 | 543 | 8 | 466 | 6.05e-102 | 316 |
Find 110 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTCATGACTATTACTTTAT+TGG | 0.083132 | 1.3:+6226553 | MS.gene051586:CDS |
| ATTCCTGATGTAAAATTTAC+AGG | 0.237883 | 1.3:+6226604 | MS.gene051586:CDS |
| TATCAAATGATCTCATAAAT+TGG | 0.252410 | 1.3:+6226011 | MS.gene051586:CDS |
| AACATTTGGTCATGAGAAAA+TGG | 0.293056 | 1.3:+6225973 | MS.gene051586:CDS |
| AAAAGGATGGGCTGGTCTTC+AGG | 0.293113 | 1.3:+6226756 | MS.gene051586:CDS |
| GGTTATATTGGTAGAATAAA+TGG | 0.306959 | 1.3:-6225940 | None:intergenic |
| AGACAATTCCAAGGAAGTTT+TGG | 0.313956 | 1.3:+6226902 | MS.gene051586:intron |
| CTAAGAACAGGAGAATATTA+TGG | 0.318622 | 1.3:+6226692 | MS.gene051586:CDS |
| GAGTTGAAGTCGGTGAATTC+CGG | 0.322187 | 1.3:+6226260 | MS.gene051586:CDS |
| TAAGGATCAGATAGGTTCTT+TGG | 0.324724 | 1.3:-6226184 | None:intergenic |
| TGACCAAATGTTGCTGCATC+AGG | 0.325786 | 1.3:-6225962 | None:intergenic |
| GGATCAACTGTTGAAGTAAA+AGG | 0.330439 | 1.3:+6227024 | MS.gene051586:CDS |
| ATCTCCAAAACTCTCTATAA+TGG | 0.332421 | 1.3:-6227952 | None:intergenic |
| CACTTTACAGGTCTTCATTA+CGG | 0.345350 | 1.3:+6227749 | MS.gene051586:intron |
| GGCAAGGAAATGATGGAAAA+TGG | 0.346822 | 1.3:+6226299 | MS.gene051586:CDS |
| TTGCTGCATCAGGGTTATAT+TGG | 0.350746 | 1.3:-6225952 | None:intergenic |
| AGGTCCATTATAGAGAGTTT+TGG | 0.351375 | 1.3:+6227948 | MS.gene051586:CDS |
| AGTGAAAATGACATTCAAAA+AGG | 0.353647 | 1.3:+6226739 | MS.gene051586:CDS |
| AGAGGACAACAATATCTTTC+CGG | 0.357585 | 1.3:+6227315 | MS.gene051586:CDS |
| GCATCAAGAAAAGGCATGAT+AGG | 0.363674 | 1.3:+6227251 | MS.gene051586:CDS |
| AAGGAATTGAGATTTGACTA+TGG | 0.364788 | 1.3:+6226634 | MS.gene051586:CDS |
| ACTTTACAGGTCTTCATTAC+GGG | 0.371486 | 1.3:+6227750 | MS.gene051586:intron |
| GTCAAAGATAGTTGCATATG+AGG | 0.378605 | 1.3:-6227788 | None:intergenic |
| ACCTATCTGATCCTTACTTA+AGG | 0.381106 | 1.3:+6226191 | MS.gene051586:CDS |
| GTAATCATTGGTGCGCAAAA+TGG | 0.381654 | 1.3:+6226325 | MS.gene051586:CDS |
| AGCATGAAGCAAGCAGAGTT+TGG | 0.386544 | 1.3:+6228095 | MS.gene051586:CDS |
| TTATCAAGCCAAAACTTCCT+TGG | 0.387614 | 1.3:-6226910 | None:intergenic |
| AACTCAGCACTTTGTAGATC+AGG | 0.394334 | 1.3:-6227179 | None:intergenic |
| AACCCTGATGCAGCAACATT+TGG | 0.398188 | 1.3:+6225959 | MS.gene051586:CDS |
| AGTTGAAGTCGGTGAATTCC+GGG | 0.403765 | 1.3:+6226261 | MS.gene051586:CDS |
| AACTATTTCACTTAGAAGCT+TGG | 0.408959 | 1.3:+6227828 | MS.gene051586:CDS |
| AAATGGAGTTGATACAACTA+TGG | 0.410792 | 1.3:+6226483 | MS.gene051586:CDS |
| CCTATCTGATCCTTACTTAA+GGG | 0.424795 | 1.3:+6226192 | MS.gene051586:CDS |
| ACAGGACCAATGTACTATAA+AGG | 0.424990 | 1.3:+6225911 | MS.gene051586:intron |
| TTTCCTTGCCATGCAGTTGA+AGG | 0.426112 | 1.3:-6226286 | None:intergenic |
| CTTCAACAGTTGATCCACTT+TGG | 0.431811 | 1.3:-6227017 | None:intergenic |
| TAAGAACAGGAGAATATTAT+GGG | 0.436477 | 1.3:+6226693 | MS.gene051586:CDS |
| AAAGGCATGATAGGGCCATT+TGG | 0.439504 | 1.3:+6227260 | MS.gene051586:CDS |
| TGGAAAATATGTATCTGATC+AGG | 0.445267 | 1.3:+6226573 | MS.gene051586:CDS |
| CTGAACAGCCATACAGAACT+TGG | 0.447033 | 1.3:+6224937 | MS.gene051586:CDS |
| GACATAAACAGTTGTTGGTC+AGG | 0.447820 | 1.3:+6226073 | MS.gene051586:CDS |
| TTCTTTGCAACAGATGGTAC+TGG | 0.449332 | 1.3:+6226415 | MS.gene051586:CDS |
| TTTATGTCACCAGGTATAGT+TGG | 0.451176 | 1.3:-6226058 | None:intergenic |
| TGTTCAGAATTGATACTGTT+TGG | 0.451703 | 1.3:-6224921 | None:intergenic |
| GTGTATATCAATAACACAAA+TGG | 0.454605 | 1.3:+6226466 | MS.gene051586:CDS |
| AAAAGGTATCACTGCATCTC+AGG | 0.460368 | 1.3:+6227041 | MS.gene051586:CDS |
| AAACCTGCTATGTTGTATAC+AGG | 0.465299 | 1.3:+6226121 | MS.gene051586:CDS |
| CTTCATCATGCAGATCCTAA+TGG | 0.465314 | 1.3:+6225114 | MS.gene051586:intron |
| TGATCCTTACTTAAGGGAAT+GGG | 0.475429 | 1.3:+6226198 | MS.gene051586:CDS |
| TCTGTTGCAAAGAAAGGTAT+AGG | 0.475934 | 1.3:-6226406 | None:intergenic |
| CATCGTCGACTCTATATATC+CGG | 0.476036 | 1.3:-6227334 | None:intergenic |
| CTGATCCTTACTTAAGGGAA+TGG | 0.477383 | 1.3:+6226197 | MS.gene051586:CDS |
| ATGTAAAATTTACAGGAACT+TGG | 0.482891 | 1.3:+6226611 | MS.gene051586:CDS |
| GGCAATCAAATCAATATCAC+TGG | 0.492113 | 1.3:+6226985 | MS.gene051586:CDS |
| GTACCATCTGTTGCAAAGAA+AGG | 0.493447 | 1.3:-6226412 | None:intergenic |
| GGTGCGCAAAATGGCGATGA+AGG | 0.496572 | 1.3:+6226334 | MS.gene051586:CDS |
| ACTGCATGGCAAGGAAATGA+TGG | 0.498338 | 1.3:+6226292 | MS.gene051586:CDS |
| GAACAATATGCATCAAGAAA+AGG | 0.506692 | 1.3:+6227242 | MS.gene051586:CDS |
| CCCTTAAGTAAGGATCAGAT+AGG | 0.507949 | 1.3:-6226192 | None:intergenic |
| ATACCTTTCTTTGCAACAGA+TGG | 0.509617 | 1.3:+6226409 | MS.gene051586:CDS |
| CTGGTGACATAAACAGTTGT+TGG | 0.512139 | 1.3:+6226068 | MS.gene051586:CDS |
| ATATTGTTGTCCTCTCTGCC+TGG | 0.512873 | 1.3:-6227307 | None:intergenic |
| ATCAGATAGGTTCTTTGGCA+TGG | 0.518490 | 1.3:-6226179 | None:intergenic |
| GCTAAAGCTTGCAAACCAAA+TGG | 0.522260 | 1.3:-6227275 | None:intergenic |
| TTATCTCAGAACTGAATGCT+TGG | 0.526377 | 1.3:+6228072 | MS.gene051586:CDS |
| TCTTGAGGATCAACTTCACT+TGG | 0.527016 | 1.3:-6227209 | None:intergenic |
| GCCATGCAGTTGAAGGATCC+CGG | 0.529392 | 1.3:-6226279 | None:intergenic |
| ACAGGAGAATATTATGGGCA+TGG | 0.535196 | 1.3:+6226698 | MS.gene051586:CDS |
| TGGTCATGAGAAAATGGTAT+GGG | 0.536881 | 1.3:+6225979 | MS.gene051586:CDS |
| GGTGGTATATGCAGATTGAC+AGG | 0.537844 | 1.3:+6227928 | MS.gene051586:intron |
| TGTTCTTTACAGAGTTCTTG+AGG | 0.543126 | 1.3:-6227224 | None:intergenic |
| TTGGTCATGAGAAAATGGTA+TGG | 0.544520 | 1.3:+6225978 | MS.gene051586:CDS |
| ATTCCTGTATACAACATAGC+AGG | 0.545924 | 1.3:-6226124 | None:intergenic |
| ATTGAGATTTGACTATGGAA+AGG | 0.547063 | 1.3:+6226639 | MS.gene051586:CDS |
| CAACAACTGTTTATGTCACC+AGG | 0.549416 | 1.3:-6226067 | None:intergenic |
| CATCTTTATGTATTCAACAA+TGG | 0.558641 | 1.3:+6228035 | MS.gene051586:CDS |
| CATCAAGAAAAGGCATGATA+GGG | 0.558806 | 1.3:+6227252 | MS.gene051586:CDS |
| ATATTCTCCTGTTCTTAGCA+TGG | 0.560528 | 1.3:-6226687 | None:intergenic |
| CAGGAGAATATTATGGGCAT+GGG | 0.561703 | 1.3:+6226699 | MS.gene051586:CDS |
| CCACTAGGTGGAGTCATCAA+AGG | 0.562008 | 1.3:-6226238 | None:intergenic |
| GGCTCAGCCACTATACTCCC+AGG | 0.563694 | 1.3:+6226094 | MS.gene051586:CDS |
| TCCGGGATCCTTCAACTGCA+TGG | 0.567033 | 1.3:+6226278 | MS.gene051586:CDS |
| TTTGTGTTATTGATATACAC+AGG | 0.571855 | 1.3:-6226463 | None:intergenic |
| GAGAATATTATGGGCATGGG+CGG | 0.571936 | 1.3:+6226702 | MS.gene051586:CDS |
| TGATGATAAGTGACCAGACC+AGG | 0.572252 | 1.3:+6227369 | MS.gene051586:CDS |
| AATTATTCTTTACAAAAGTG+AGG | 0.574500 | 1.3:+6226360 | MS.gene051586:CDS |
| TAAACTCCTTTATAGTACAT+TGG | 0.575331 | 1.3:-6225917 | None:intergenic |
| AAAATTTACAGGAACTTGGA+AGG | 0.576790 | 1.3:+6226615 | MS.gene051586:CDS |
| AAGTGGTACCAAGTTCTGTA+TGG | 0.578663 | 1.3:-6224945 | None:intergenic |
| TGATATTGATTTGATTGCCA+CGG | 0.594415 | 1.3:-6226981 | None:intergenic |
| ATGGGAAGCAATTAATGCAA+TGG | 0.594697 | 1.3:+6226935 | MS.gene051586:CDS |
| GCTATTGAACCAACTATACC+TGG | 0.595633 | 1.3:+6226049 | MS.gene051586:CDS |
| GACCAAATGTTGCTGCATCA+GGG | 0.599733 | 1.3:-6225961 | None:intergenic |
| TCACAATGTAGACAATTCCA+AGG | 0.599864 | 1.3:+6226893 | MS.gene051586:intron |
| TCACCGACTTCAACTCCACT+AGG | 0.605450 | 1.3:-6226253 | None:intergenic |
| AGCTTTAGCATCAAAAGACC+AGG | 0.607871 | 1.3:+6227289 | MS.gene051586:CDS |
| GATCCTTCAACTGCATGGCA+AGG | 0.615553 | 1.3:+6226283 | MS.gene051586:CDS |
| AAGGAAATGATGGAAAATGG+AGG | 0.623713 | 1.3:+6226302 | MS.gene051586:CDS |
| GGAAAATGGAGGGTAATCAT+TGG | 0.627171 | 1.3:+6226313 | MS.gene051586:CDS |
| CCACCTAGTGGAGTTGAAGT+CGG | 0.629703 | 1.3:+6226250 | MS.gene051586:CDS |
| ACTGGAGAAACACTCCAAAG+TGG | 0.631213 | 1.3:+6227003 | MS.gene051586:CDS |
| TTACAGGTCTTCATTACGGG+AGG | 0.640875 | 1.3:+6227753 | MS.gene051586:intron |
| CCTTTGATGACTCCACCTAG+TGG | 0.641854 | 1.3:+6226238 | MS.gene051586:CDS |
| CAACAATGGAAGTCAGAATG+TGG | 0.643239 | 1.3:+6228049 | MS.gene051586:CDS |
| AGGAAATGATGGAAAATGGA+GGG | 0.651406 | 1.3:+6226303 | MS.gene051586:CDS |
| CATCATGGAGAACATTACAA+AGG | 0.655826 | 1.3:+6224890 | None:intergenic |
| CGGATATATAGAGTCGACGA+TGG | 0.658526 | 1.3:+6227335 | MS.gene051586:CDS |
| CATCAAAAGACCAGGCAGAG+AGG | 0.668940 | 1.3:+6227297 | MS.gene051586:CDS |
| GGTCATGAGAAAATGGTATG+GGG | 0.676642 | 1.3:+6225980 | MS.gene051586:CDS |
| CCGACTTCAACTCCACTAGG+TGG | 0.683686 | 1.3:-6226250 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAGAAAATATTTTTACA+AGG | - | chr1.3:6225728-6225747 | None:intergenic | 10.0% |
| !!! | TTTTTTAATTTAACTTTTCA+AGG | + | chr1.3:6227130-6227149 | MS.gene051586:intron | 10.0% |
| !! | TTAAAATGAATACATACTTT+AGG | - | chr1.3:6225757-6225776 | None:intergenic | 15.0% |
| !!! | TTATATTTCTCTTCTTTTTT+TGG | + | chr1.3:6225338-6225357 | MS.gene051586:intron | 15.0% |
| !! | AATAGTGTAAAAAAATAACC+TGG | - | chr1.3:6227390-6227409 | None:intergenic | 20.0% |
| !! | AATTATTCTTTACAAAAGTG+AGG | + | chr1.3:6226360-6226379 | MS.gene051586:CDS | 20.0% |
| !! | ACAAATAAACAACACTTATA+AGG | - | chr1.3:6227867-6227886 | None:intergenic | 20.0% |
| !! | AGTATATACTACATATGTAT+AGG | + | chr1.3:6225205-6225224 | MS.gene051586:intron | 20.0% |
| !! | ATACATATGTAGTATATACT+AGG | - | chr1.3:6225205-6225224 | None:intergenic | 20.0% |
| !! | ATGAAATTTGAAGAATTTGA+TGG | + | chr1.3:6225255-6225274 | MS.gene051586:intron | 20.0% |
| !! | CAAATTCTTCAAATTTCATA+TGG | - | chr1.3:6225254-6225273 | None:intergenic | 20.0% |
| !! | GTATATACTACATATGTATA+GGG | + | chr1.3:6225206-6225225 | MS.gene051586:intron | 20.0% |
| !! | TATAGAAATAAGTACAAGAT+TGG | - | chr1.3:6225440-6225459 | None:intergenic | 20.0% |
| !! | TATATACTACATATGTATAG+GGG | + | chr1.3:6225207-6225226 | MS.gene051586:intron | 20.0% |
| !! | TATCAAATGATCTCATAAAT+TGG | + | chr1.3:6226011-6226030 | MS.gene051586:CDS | 20.0% |
| !! | TGAAATTTGAAGAATTTGAT+GGG | + | chr1.3:6225256-6225275 | MS.gene051586:intron | 20.0% |
| !! | TTATAACTATTATCTAGATC+AGG | - | chr1.3:6226848-6226867 | None:intergenic | 20.0% |
| !!! | AAATATTTTTACAAGGTGAA+CGG | - | chr1.3:6225721-6225740 | None:intergenic | 20.0% |
| !!! | AGAATGTTGATTTTATCAAA+GGG | + | chr1.3:6227580-6227599 | MS.gene051586:intron | 20.0% |
| !!! | TCTAAAATAGTTTGAAAATG+AGG | + | chr1.3:6225645-6225664 | MS.gene051586:intron | 20.0% |
| !!! | TTTTATTTTAGTTTCGTGAT+AGG | + | chr1.3:6226781-6226800 | MS.gene051586:intron | 20.0% |
| ! | AAAATGACATTCAAAAAGGA+TGG | + | chr1.3:6226743-6226762 | MS.gene051586:CDS | 25.0% |
| ! | AAATGACATTCAAAAAGGAT+GGG | + | chr1.3:6226744-6226763 | MS.gene051586:CDS | 25.0% |
| ! | ACATATGTGCAAAAAGTAAA+TGG | - | chr1.3:6225024-6225043 | None:intergenic | 25.0% |
| ! | AGTGAAAATGACATTCAAAA+AGG | + | chr1.3:6226739-6226758 | MS.gene051586:CDS | 25.0% |
| ! | ATATACACAGGAAAAAAATC+TGG | - | chr1.3:6226454-6226473 | None:intergenic | 25.0% |
| ! | ATGTAAAATTTACAGGAACT+TGG | + | chr1.3:6226611-6226630 | MS.gene051586:CDS | 25.0% |
| ! | ATTCCTGATGTAAAATTTAC+AGG | + | chr1.3:6226604-6226623 | MS.gene051586:CDS | 25.0% |
| ! | CAATGAGACTTATATAATCA+AGG | + | chr1.3:6227611-6227630 | MS.gene051586:intron | 25.0% |
| ! | CATCTTTATGTATTCAACAA+TGG | + | chr1.3:6228035-6228054 | MS.gene051586:CDS | 25.0% |
| ! | GGTTATATTGGTAGAATAAA+TGG | - | chr1.3:6225943-6225962 | None:intergenic | 25.0% |
| ! | GTGTATATCAATAACACAAA+TGG | + | chr1.3:6226466-6226485 | MS.gene051586:CDS | 25.0% |
| ! | TAAACTCCTTTATAGTACAT+TGG | - | chr1.3:6225920-6225939 | None:intergenic | 25.0% |
| ! | TAAGAACAGGAGAATATTAT+GGG | + | chr1.3:6226693-6226712 | MS.gene051586:CDS | 25.0% |
| ! | TTGAAGAAATAGTTGGATTA+TGG | - | chr1.3:6225861-6225880 | None:intergenic | 25.0% |
| !! | AGTTTTTCTAACTCTTCAAT+TGG | - | chr1.3:6226961-6226980 | None:intergenic | 25.0% |
| !! | ATAACAGAAAAGCATAGAAA+GGG | + | chr1.3:6227528-6227547 | MS.gene051586:intron | 25.0% |
| !! | TATATTTTTCCAGATGTGTT+TGG | - | chr1.3:6225483-6225502 | None:intergenic | 25.0% |
| !! | TCTTTTTCTGTAGCAAATAA+AGG | - | chr1.3:6228011-6228030 | None:intergenic | 25.0% |
| !! | TTTGTGTTATTGATATACAC+AGG | - | chr1.3:6226466-6226485 | None:intergenic | 25.0% |
| !!! | AAGATGATGGTTTTCAATTT+TGG | - | chr1.3:6225097-6225116 | None:intergenic | 25.0% |
| !!! | AAGTGAAATAGTTTTGAGAT+TGG | - | chr1.3:6227821-6227840 | None:intergenic | 25.0% |
| !!! | AATATTTTTACAAGGTGAAC+GGG | - | chr1.3:6225720-6225739 | None:intergenic | 25.0% |
| !!! | AGTGAAATAGTTTTGAGATT+GGG | - | chr1.3:6227820-6227839 | None:intergenic | 25.0% |
| !!! | CACTATTCAAACTTATTTTG+CGG | + | chr1.3:6227403-6227422 | MS.gene051586:intron | 25.0% |
| !!! | GAGAATGTTGATTTTATCAA+AGG | + | chr1.3:6227579-6227598 | MS.gene051586:intron | 25.0% |
| !!! | TCAAACTATTTTAGATGTGT+CGG | - | chr1.3:6225640-6225659 | None:intergenic | 25.0% |
| AAAATTTACAGGAACTTGGA+AGG | + | chr1.3:6226615-6226634 | MS.gene051586:CDS | 30.0% | |
| AACATTTGGTCATGAGAAAA+TGG | + | chr1.3:6225973-6225992 | MS.gene051586:CDS | 30.0% | |
| AACTATTTCACTTAGAAGCT+TGG | + | chr1.3:6227828-6227847 | MS.gene051586:CDS | 30.0% | |
| AAGGAATTGAGATTTGACTA+TGG | + | chr1.3:6226634-6226653 | MS.gene051586:CDS | 30.0% | |
| AATTTGAAGAATTTGATGGG+AGG | + | chr1.3:6225259-6225278 | MS.gene051586:intron | 30.0% | |
| ATACAATGTCACCCTTTATT+TGG | + | chr1.3:6225828-6225847 | MS.gene051586:intron | 30.0% | |
| ATCGTTCGATGTTTATCTAA+TGG | - | chr1.3:6227686-6227705 | None:intergenic | 30.0% | |
| ATCTCCAAAACTCTCTATAA+TGG | - | chr1.3:6227955-6227974 | None:intergenic | 30.0% | |
| ATTGAGATTTGACTATGGAA+AGG | + | chr1.3:6226639-6226658 | MS.gene051586:CDS | 30.0% | |
| CGTCATGACTATTACTTTAT+TGG | + | chr1.3:6226553-6226572 | MS.gene051586:CDS | 30.0% | |
| CTAAGAACAGGAGAATATTA+TGG | + | chr1.3:6226692-6226711 | MS.gene051586:CDS | 30.0% | |
| GAACAATATGCATCAAGAAA+AGG | + | chr1.3:6227242-6227261 | MS.gene051586:CDS | 30.0% | |
| TACATCTATATAGTCGATCT+CGG | + | chr1.3:6227660-6227679 | MS.gene051586:intron | 30.0% | |
| TGGAAAATATGTATCTGATC+AGG | + | chr1.3:6226573-6226592 | MS.gene051586:CDS | 30.0% | |
| TGTAAAAAAATAACCTGGTC+TGG | - | chr1.3:6227385-6227404 | None:intergenic | 30.0% | |
| TGTGAATATGTTACGTTAGT+AGG | - | chr1.3:6225689-6225708 | None:intergenic | 30.0% | |
| TGTTCAGAATTGATACTGTT+TGG | - | chr1.3:6224924-6224943 | None:intergenic | 30.0% | |
| TGTTTGGTTATGAGAAGAAA+TGG | - | chr1.3:6225467-6225486 | None:intergenic | 30.0% | |
| TTGAAACCAGAACACAAATT+AGG | + | chr1.3:6225803-6225822 | MS.gene051586:intron | 30.0% | |
| ! | AAAGTGAGGATTTTGTTAAG+TGG | + | chr1.3:6226374-6226393 | MS.gene051586:CDS | 30.0% |
| ! | ACTTTCAGCCTCTAAAAAAT+TGG | + | chr1.3:6224964-6224983 | MS.gene051586:CDS | 30.0% |
| ! | CCTCTAAAAAATTGGATGAA+TGG | + | chr1.3:6224972-6224991 | MS.gene051586:CDS | 30.0% |
| ! | GATAACAGAAAAGCATAGAA+AGG | + | chr1.3:6227527-6227546 | MS.gene051586:intron | 30.0% |
| ! | GGATTTTGTTAAGTGGATAT+TGG | + | chr1.3:6226381-6226400 | MS.gene051586:CDS | 30.0% |
| ! | GTTCCTGTAAATTTTACATC+AGG | - | chr1.3:6226610-6226629 | None:intergenic | 30.0% |
| ! | TACAATGTCACCCTTTATTT+GGG | + | chr1.3:6225829-6225848 | MS.gene051586:intron | 30.0% |
| ! | TTAAGTTTTGCACACTTTAC+AGG | + | chr1.3:6227737-6227756 | MS.gene051586:intron | 30.0% |
| !! | AAATGGAGTTGATACAACTA+TGG | + | chr1.3:6226483-6226502 | MS.gene051586:CDS | 30.0% |
| !! | TGATATTGATTTGATTGCCA+CGG | - | chr1.3:6226984-6227003 | None:intergenic | 30.0% |
| !!! | AAGTTTTGGCTTGATAAGAA+TGG | + | chr1.3:6226916-6226935 | MS.gene051586:CDS | 30.0% |
| !!! | AATGTCATTTTCACTAGAGT+CGG | - | chr1.3:6226734-6226753 | None:intergenic | 30.0% |
| !!! | AATTTTTTAGAGGCTGAAAG+TGG | - | chr1.3:6224965-6224984 | None:intergenic | 30.0% |
| !!! | AGTTTTGGCTTGATAAGAAT+GGG | + | chr1.3:6226917-6226936 | MS.gene051586:CDS | 30.0% |
| !!! | ATGGGAGGTATTTTTAATTG+AGG | + | chr1.3:6225274-6225293 | MS.gene051586:intron | 30.0% |
| !!! | ATTATAGAGAGTTTTGGAGA+TGG | + | chr1.3:6227954-6227973 | MS.gene051586:CDS | 30.0% |
| !!! | CCATTCATCCAATTTTTTAG+AGG | - | chr1.3:6224975-6224994 | None:intergenic | 30.0% |
| !!! | TGGGAGGTATTTTTAATTGA+GGG | + | chr1.3:6225275-6225294 | MS.gene051586:intron | 30.0% |
| AAACCTGCTATGTTGTATAC+AGG | + | chr1.3:6226121-6226140 | MS.gene051586:CDS | 35.0% | |
| ACAGGACCAATGTACTATAA+AGG | + | chr1.3:6225911-6225930 | MS.gene051586:intron | 35.0% | |
| ACCTATCTGATCCTTACTTA+AGG | + | chr1.3:6226191-6226210 | MS.gene051586:CDS | 35.0% | |
| ACTTTACAGGTCTTCATTAC+GGG | + | chr1.3:6227750-6227769 | MS.gene051586:intron | 35.0% | |
| AGACATTGAATCTCTCATTG+AGG | + | chr1.3:6227447-6227466 | MS.gene051586:intron | 35.0% | |
| AGAGGACAACAATATCTTTC+CGG | + | chr1.3:6227315-6227334 | MS.gene051586:CDS | 35.0% | |
| AGAGTATGAAGCATACCATT+AGG | - | chr1.3:6225132-6225151 | None:intergenic | 35.0% | |
| ATACCTTTCTTTGCAACAGA+TGG | + | chr1.3:6226409-6226428 | MS.gene051586:CDS | 35.0% | |
| ATATTCTCCTGTTCTTAGCA+TGG | - | chr1.3:6226690-6226709 | None:intergenic | 35.0% | |
| ATGGAACATGCCCAAATAAA+GGG | - | chr1.3:6225842-6225861 | None:intergenic | 35.0% | |
| ATGGGAAGCAATTAATGCAA+TGG | + | chr1.3:6226935-6226954 | MS.gene051586:CDS | 35.0% | |
| ATTCCTGTATACAACATAGC+AGG | - | chr1.3:6226127-6226146 | None:intergenic | 35.0% | |
| CACTTTACAGGTCTTCATTA+CGG | + | chr1.3:6227749-6227768 | MS.gene051586:intron | 35.0% | |
| CCTATCTGATCCTTACTTAA+GGG | + | chr1.3:6226192-6226211 | MS.gene051586:CDS | 35.0% | |
| GACATTGAATCTCTCATTGA+GGG | + | chr1.3:6227448-6227467 | MS.gene051586:intron | 35.0% | |
| GAGCACATTGAAGAAATAGT+TGG | - | chr1.3:6225868-6225887 | None:intergenic | 35.0% | |
| GGATCAACTGTTGAAGTAAA+AGG | + | chr1.3:6227024-6227043 | MS.gene051586:CDS | 35.0% | |
| GGCAATCAAATCAATATCAC+TGG | + | chr1.3:6226985-6227004 | MS.gene051586:CDS | 35.0% | |
| GTAGTATATACTAGGATGTG+AGG | - | chr1.3:6225197-6225216 | None:intergenic | 35.0% | |
| GTCAAAGATAGTTGCATATG+AGG | - | chr1.3:6227791-6227810 | None:intergenic | 35.0% | |
| TAAGGATCAGATAGGTTCTT+TGG | - | chr1.3:6226187-6226206 | None:intergenic | 35.0% | |
| TATGGAACATGCCCAAATAA+AGG | - | chr1.3:6225843-6225862 | None:intergenic | 35.0% | |
| TCACAATGTAGACAATTCCA+AGG | + | chr1.3:6226893-6226912 | MS.gene051586:intron | 35.0% | |
| TGATCCTTACTTAAGGGAAT+GGG | + | chr1.3:6226198-6226217 | MS.gene051586:CDS | 35.0% | |
| TGGTCATGAGAAAATGGTAT+GGG | + | chr1.3:6225979-6225998 | MS.gene051586:CDS | 35.0% | |
| TGTTCTTTACAGAGTTCTTG+AGG | - | chr1.3:6227227-6227246 | None:intergenic | 35.0% | |
| TTATCAAGCCAAAACTTCCT+TGG | - | chr1.3:6226913-6226932 | None:intergenic | 35.0% | |
| TTATCTCAGAACTGAATGCT+TGG | + | chr1.3:6228072-6228091 | MS.gene051586:CDS | 35.0% | |
| TTCTCATAACCAAACACATC+TGG | + | chr1.3:6225471-6225490 | MS.gene051586:intron | 35.0% | |
| TTGCGAGTTTCATACATATG+AGG | + | chr1.3:6227904-6227923 | MS.gene051586:intron | 35.0% | |
| TTGGTCATGAGAAAATGGTA+TGG | + | chr1.3:6225978-6225997 | MS.gene051586:CDS | 35.0% | |
| TTTATGTCACCAGGTATAGT+TGG | - | chr1.3:6226061-6226080 | None:intergenic | 35.0% | |
| ! | AACTGTTTCTTCTATGTGAC+AGG | + | chr1.3:6225893-6225912 | MS.gene051586:intron | 35.0% |
| ! | AAGGAAATGATGGAAAATGG+AGG | + | chr1.3:6226302-6226321 | MS.gene051586:CDS | 35.0% |
| ! | AGACAATTCCAAGGAAGTTT+TGG | + | chr1.3:6226902-6226921 | MS.gene051586:intron | 35.0% |
| ! | AGGAAATGATGGAAAATGGA+GGG | + | chr1.3:6226303-6226322 | MS.gene051586:CDS | 35.0% |
| ! | AGGTCCATTATAGAGAGTTT+TGG | + | chr1.3:6227948-6227967 | MS.gene051586:CDS | 35.0% |
| ! | CATCAAGAAAAGGCATGATA+GGG | + | chr1.3:6227252-6227271 | MS.gene051586:CDS | 35.0% |
| ! | GCATGGCTAAATTTTGAACT+TGG | - | chr1.3:6226165-6226184 | None:intergenic | 35.0% |
| ! | GTATTGCCTAATTTGTGTTC+TGG | - | chr1.3:6225812-6225831 | None:intergenic | 35.0% |
| ! | TCTGTTGCAAAGAAAGGTAT+AGG | - | chr1.3:6226409-6226428 | None:intergenic | 35.0% |
| ! | TGAGGTCTCATTTTCAAACA+CGG | + | chr1.3:6225663-6225682 | MS.gene051586:intron | 35.0% |
| ! | TTTTCCCATTCCCTTAAGTA+AGG | - | chr1.3:6226205-6226224 | None:intergenic | 35.0% |
| ! | TTTTTGACCATGCTAAGAAC+AGG | + | chr1.3:6226680-6226699 | MS.gene051586:CDS | 35.0% |
| !! | TTAACTTTTCAAGGCTGATG+TGG | + | chr1.3:6227139-6227158 | MS.gene051586:intron | 35.0% |
| !!! | GGGAGGTATTTTTAATTGAG+GGG | + | chr1.3:6225276-6225295 | MS.gene051586:intron | 35.0% |
| AACTCAGCACTTTGTAGATC+AGG | - | chr1.3:6227182-6227201 | None:intergenic | 40.0% | |
| AAGTGGTACCAAGTTCTGTA+TGG | - | chr1.3:6224948-6224967 | None:intergenic | 40.0% | |
| ACAGGAGAATATTATGGGCA+TGG | + | chr1.3:6226698-6226717 | MS.gene051586:CDS | 40.0% | |
| ATCAGATAGGTTCTTTGGCA+TGG | - | chr1.3:6226182-6226201 | None:intergenic | 40.0% | |
| CAACAACTGTTTATGTCACC+AGG | - | chr1.3:6226070-6226089 | None:intergenic | 40.0% | |
| CAACAATGGAAGTCAGAATG+TGG | + | chr1.3:6228049-6228068 | MS.gene051586:CDS | 40.0% | |
| CAGGAGAATATTATGGGCAT+GGG | + | chr1.3:6226699-6226718 | MS.gene051586:CDS | 40.0% | |
| CCCTTAAGTAAGGATCAGAT+AGG | - | chr1.3:6226195-6226214 | None:intergenic | 40.0% | |
| CGAGTTTCATACATATGAGG+TGG | + | chr1.3:6227907-6227926 | MS.gene051586:intron | 40.0% | |
| CTGATCCTTACTTAAGGGAA+TGG | + | chr1.3:6226197-6226216 | MS.gene051586:CDS | 40.0% | |
| CTGGTGACATAAACAGTTGT+TGG | + | chr1.3:6226068-6226087 | MS.gene051586:CDS | 40.0% | |
| CTTCAACAGTTGATCCACTT+TGG | - | chr1.3:6227020-6227039 | None:intergenic | 40.0% | |
| CTTCATCATGCAGATCCTAA+TGG | + | chr1.3:6225114-6225133 | MS.gene051586:intron | 40.0% | |
| GAACTGTAACATCGACAATG+TGG | - | chr1.3:6227491-6227510 | None:intergenic | 40.0% | |
| GAAGAGTTAGAAAAACTCCG+TGG | + | chr1.3:6226964-6226983 | MS.gene051586:CDS | 40.0% | |
| GACATAAACAGTTGTTGGTC+AGG | + | chr1.3:6226073-6226092 | MS.gene051586:CDS | 40.0% | |
| GATCTGCATGATGAAGATGA+TGG | - | chr1.3:6225110-6225129 | None:intergenic | 40.0% | |
| GCTAAAGCTTGCAAACCAAA+TGG | - | chr1.3:6227278-6227297 | None:intergenic | 40.0% | |
| GCTATTGAACCAACTATACC+TGG | + | chr1.3:6226049-6226068 | MS.gene051586:CDS | 40.0% | |
| GGAAAATGGAGGGTAATCAT+TGG | + | chr1.3:6226313-6226332 | MS.gene051586:CDS | 40.0% | |
| GGTCATGAGAAAATGGTATG+GGG | + | chr1.3:6225980-6225999 | MS.gene051586:CDS | 40.0% | |
| GTAATCATTGGTGCGCAAAA+TGG | + | chr1.3:6226325-6226344 | MS.gene051586:CDS | 40.0% | |
| GTACCATCTGTTGCAAAGAA+AGG | - | chr1.3:6226415-6226434 | None:intergenic | 40.0% | |
| GTTTCATACATATGAGGTGG+TGG | + | chr1.3:6227910-6227929 | MS.gene051586:intron | 40.0% | |
| TCTTGAGGATCAACTTCACT+TGG | - | chr1.3:6227212-6227231 | None:intergenic | 40.0% | |
| TTCTTTGCAACAGATGGTAC+TGG | + | chr1.3:6226415-6226434 | MS.gene051586:CDS | 40.0% | |
| TTGCTGCATCAGGGTTATAT+TGG | - | chr1.3:6225955-6225974 | None:intergenic | 40.0% | |
| ! | AACATAGCAGGTTTTTCACC+TGG | - | chr1.3:6226115-6226134 | None:intergenic | 40.0% |
| ! | AACGACTTAAGTTGTGCTTG+GGG | - | chr1.3:6225614-6225633 | None:intergenic | 40.0% |
| ! | ACATAGCAGGTTTTTCACCT+GGG | - | chr1.3:6226114-6226133 | None:intergenic | 40.0% |
| ! | AGCTTTAGCATCAAAAGACC+AGG | + | chr1.3:6227289-6227308 | MS.gene051586:CDS | 40.0% |
| ! | CAACGACTTAAGTTGTGCTT+GGG | - | chr1.3:6225615-6225634 | None:intergenic | 40.0% |
| ! | GCATCAAGAAAAGGCATGAT+AGG | + | chr1.3:6227251-6227270 | MS.gene051586:CDS | 40.0% |
| ! | GGAGTCATCAAAGGATTTTG+AGG | - | chr1.3:6226232-6226251 | None:intergenic | 40.0% |
| ! | GGCAAGGAAATGATGGAAAA+TGG | + | chr1.3:6226299-6226318 | MS.gene051586:CDS | 40.0% |
| ! | TCAACGACTTAAGTTGTGCT+TGG | - | chr1.3:6225616-6225635 | None:intergenic | 40.0% |
| !! | AAAAGGTATCACTGCATCTC+AGG | + | chr1.3:6227041-6227060 | MS.gene051586:CDS | 40.0% |
| !! | CAGTTCTAGATGGAAGTACA+TGG | + | chr1.3:6227505-6227524 | MS.gene051586:intron | 40.0% |
| !! | CATCGTCGACTCTATATATC+CGG | - | chr1.3:6227337-6227356 | None:intergenic | 40.0% |
| !! | GTCGATGTTACAGTTCTAGA+TGG | + | chr1.3:6227495-6227514 | MS.gene051586:intron | 40.0% |
| !! | TTTTTCACCTGGGAGTATAG+TGG | - | chr1.3:6226104-6226123 | None:intergenic | 40.0% |
| !!! | ATAGAGAGTTTTGGAGATGG+AGG | + | chr1.3:6227957-6227976 | MS.gene051586:CDS | 40.0% |
| !!! | TAGAGAGTTTTGGAGATGGA+GGG | + | chr1.3:6227958-6227977 | MS.gene051586:CDS | 40.0% |
| AACCCTGATGCAGCAACATT+TGG | + | chr1.3:6225959-6225978 | MS.gene051586:CDS | 45.0% | |
| ACTGCATGGCAAGGAAATGA+TGG | + | chr1.3:6226292-6226311 | MS.gene051586:CDS | 45.0% | |
| ACTGGAGAAACACTCCAAAG+TGG | + | chr1.3:6227003-6227022 | MS.gene051586:CDS | 45.0% | |
| AGCATGAAGCAAGCAGAGTT+TGG | + | chr1.3:6228095-6228114 | MS.gene051586:CDS | 45.0% | |
| AGTTGAAGTCGGTGAATTCC+GGG | + | chr1.3:6226261-6226280 | MS.gene051586:CDS | 45.0% | |
| ATATTGTTGTCCTCTCTGCC+TGG | - | chr1.3:6227310-6227329 | None:intergenic | 45.0% | |
| CGGATATATAGAGTCGACGA+TGG | + | chr1.3:6227335-6227354 | MS.gene051586:CDS | 45.0% | |
| CTGAACAGCCATACAGAACT+TGG | + | chr1.3:6224937-6224956 | MS.gene051586:CDS | 45.0% | |
| GACATTCAAAAAGGATGGGC+TGG | + | chr1.3:6226748-6226767 | MS.gene051586:CDS | 45.0% | |
| GACCAAATGTTGCTGCATCA+GGG | - | chr1.3:6225964-6225983 | None:intergenic | 45.0% | |
| GAGAATATTATGGGCATGGG+CGG | + | chr1.3:6226702-6226721 | MS.gene051586:CDS | 45.0% | |
| GAGTTGAAGTCGGTGAATTC+CGG | + | chr1.3:6226260-6226279 | MS.gene051586:CDS | 45.0% | |
| GGTGGTATATGCAGATTGAC+AGG | + | chr1.3:6227928-6227947 | MS.gene051586:intron | 45.0% | |
| TGACCAAATGTTGCTGCATC+AGG | - | chr1.3:6225965-6225984 | None:intergenic | 45.0% | |
| TGATGATAAGTGACCAGACC+AGG | + | chr1.3:6227369-6227388 | MS.gene051586:CDS | 45.0% | |
| TTACAGGTCTTCATTACGGG+AGG | + | chr1.3:6227753-6227772 | MS.gene051586:intron | 45.0% | |
| TTTCCTTGCCATGCAGTTGA+AGG | - | chr1.3:6226289-6226308 | None:intergenic | 45.0% | |
| ! | AAAGGCATGATAGGGCCATT+TGG | + | chr1.3:6227260-6227279 | MS.gene051586:CDS | 45.0% |
| !! | TATAATATATAATTGTATAA+CGG | - | chr1.3:6226824-6226843 | None:intergenic | 5.0% |
| CATCAAAAGACCAGGCAGAG+AGG | + | chr1.3:6227297-6227316 | MS.gene051586:CDS | 50.0% | |
| CCACCTAGTGGAGTTGAAGT+CGG | + | chr1.3:6226250-6226269 | MS.gene051586:CDS | 50.0% | |
| CCACTAGGTGGAGTCATCAA+AGG | - | chr1.3:6226241-6226260 | None:intergenic | 50.0% | |
| GATCCTTCAACTGCATGGCA+AGG | + | chr1.3:6226283-6226302 | MS.gene051586:CDS | 50.0% | |
| ! | CCTTTGATGACTCCACCTAG+TGG | + | chr1.3:6226238-6226257 | MS.gene051586:CDS | 50.0% |
| !! | AAAAGGATGGGCTGGTCTTC+AGG | + | chr1.3:6226756-6226775 | MS.gene051586:CDS | 50.0% |
| !! | TCACCGACTTCAACTCCACT+AGG | - | chr1.3:6226256-6226275 | None:intergenic | 50.0% |
| CCGACTTCAACTCCACTAGG+TGG | - | chr1.3:6226253-6226272 | None:intergenic | 55.0% | |
| GCCATGCAGTTGAAGGATCC+CGG | - | chr1.3:6226282-6226301 | None:intergenic | 55.0% | |
| GGTGCGCAAAATGGCGATGA+AGG | + | chr1.3:6226334-6226353 | MS.gene051586:CDS | 55.0% | |
| TCCGGGATCCTTCAACTGCA+TGG | + | chr1.3:6226278-6226297 | MS.gene051586:CDS | 55.0% | |
| GGCTCAGCCACTATACTCCC+AGG | + | chr1.3:6226094-6226113 | MS.gene051586:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 6224894 | 6228136 | 6224894 | ID=MS.gene051586 |
| chr1.3 | mRNA | 6224894 | 6228136 | 6224894 | ID=MS.gene051586.t1;Parent=MS.gene051586 |
| chr1.3 | exon | 6224894 | 6224993 | 6224894 | ID=MS.gene051586.t1.exon1;Parent=MS.gene051586.t1 |
| chr1.3 | CDS | 6224894 | 6224993 | 6224894 | ID=cds.MS.gene051586.t1;Parent=MS.gene051586.t1 |
| chr1.3 | exon | 6225127 | 6225135 | 6225127 | ID=MS.gene051586.t1.exon2;Parent=MS.gene051586.t1 |
| chr1.3 | CDS | 6225127 | 6225135 | 6225127 | ID=cds.MS.gene051586.t1;Parent=MS.gene051586.t1 |
| chr1.3 | exon | 6225915 | 6226777 | 6225915 | ID=MS.gene051586.t1.exon3;Parent=MS.gene051586.t1 |
| chr1.3 | CDS | 6225915 | 6226777 | 6225915 | ID=cds.MS.gene051586.t1;Parent=MS.gene051586.t1 |
| chr1.3 | exon | 6226904 | 6227062 | 6226904 | ID=MS.gene051586.t1.exon4;Parent=MS.gene051586.t1 |
| chr1.3 | CDS | 6226904 | 6227062 | 6226904 | ID=cds.MS.gene051586.t1;Parent=MS.gene051586.t1 |
| chr1.3 | exon | 6227152 | 6227390 | 6227152 | ID=MS.gene051586.t1.exon5;Parent=MS.gene051586.t1 |
| chr1.3 | CDS | 6227152 | 6227390 | 6227152 | ID=cds.MS.gene051586.t1;Parent=MS.gene051586.t1 |
| chr1.3 | exon | 6227759 | 6227849 | 6227759 | ID=MS.gene051586.t1.exon6;Parent=MS.gene051586.t1 |
| chr1.3 | CDS | 6227759 | 6227849 | 6227759 | ID=cds.MS.gene051586.t1;Parent=MS.gene051586.t1 |
| chr1.3 | exon | 6227942 | 6228136 | 6227942 | ID=MS.gene051586.t1.exon7;Parent=MS.gene051586.t1 |
| chr1.3 | CDS | 6227942 | 6228136 | 6227942 | ID=cds.MS.gene051586.t1;Parent=MS.gene051586.t1 |
| Gene Sequence |
| Protein sequence |
