AlfalfaGEDB | MS.gene65364

M. sativa cultivar XinJiangDaYe / MS.gene65364

KEGG: -
GO: GO:0003674 GO:0003824
PFAM: PF00501.31 PF13193.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene65364.t1	RHN54425.1	96	350	12	1	1	350	206	553	7.30E-196	693

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene65364.t1	F4HUK6	48.2	355	171	5	2	350	183	530	9.3e-91	335.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene65364.t1	G7K007	96.0	350	12	1	1	350	181	528	5.3e-196	693.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050148	MS.gene65364	0.817804	2.73E-52	-1.69E-46
MS.gene050961	MS.gene65364	0.848453	6.07E-60	-1.69E-46
MS.gene05156	MS.gene65364	0.826062	3.33E-54	-1.69E-46
MS.gene051586	MS.gene65364	0.813343	2.69E-51	-1.69E-46
MS.gene051959	MS.gene65364	0.802967	4.36E-49	-1.69E-46
MS.gene052559	MS.gene65364	0.840948	6.39E-58	-1.69E-46
MS.gene052560	MS.gene65364	0.808118	3.62E-50	-1.69E-46
MS.gene052570	MS.gene65364	0.807727	4.39E-50	-1.69E-46
MS.gene053601	MS.gene65364	0.824696	7.02E-54	-1.69E-46
MS.gene056677	MS.gene65364	0.805289	1.43E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene65364.t1	MTR_5g023730	96.000	350	12	1	1	350	181	528	0.0	692
MS.gene65364.t1	MTR_5g008800	49.435	354	168	5	2	350	177	524	1.13e-112	338
MS.gene65364.t1	MTR_5g008820	47.875	353	173	4	2	350	177	522	2.55e-112	337
MS.gene65364.t1	MTR_8g074040	47.887	355	172	5	2	350	103	450	1.46e-110	331
MS.gene65364.t1	MTR_8g074120	48.442	353	173	4	2	350	132	479	8.96e-110	330
MS.gene65364.t1	MTR_8g074040	47.887	355	172	5	2	350	221	568	3.96e-109	331
MS.gene65364.t1	MTR_4g121600	44.290	359	185	5	2	350	190	543	5.28e-98	301
MS.gene65364.t1	MTR_2g044180	43.454	359	188	5	2	350	99	452	4.18e-97	296
MS.gene65364.t1	MTR_2g044180	43.454	359	188	5	2	350	190	543	7.03e-96	296
MS.gene65364.t1	MTR_3g064420	43.258	356	185	6	3	346	184	534	2.45e-89	279
MS.gene65364.t1	MTR_5g076240	41.292	356	196	6	2	350	183	532	2.22e-86	271
MS.gene65364.t1	MTR_5g076220	42.297	357	192	7	2	350	183	533	1.35e-81	259
MS.gene65364.t1	MTR_0161s0050	41.737	357	194	7	2	350	185	535	1.26e-79	254
MS.gene65364.t1	MTR_5g076200	40.336	357	199	7	2	350	183	533	2.11e-77	248
MS.gene65364.t1	MTR_0803s0020	27.168	346	230	9	13	350	399	730	2.51e-27	113
MS.gene65364.t1	MTR_8g039720	27.811	338	219	11	4	331	205	527	1.82e-24	104
MS.gene65364.t1	MTR_2g095510	27.954	347	227	11	4	342	183	514	1.02e-23	102
MS.gene65364.t1	MTR_4g077900	26.479	355	224	11	7	344	121	455	1.10e-22	99.0
MS.gene65364.t1	MTR_1g026310	24.650	357	245	8	4	350	202	544	1.24e-22	99.4
MS.gene65364.t1	MTR_1g063110	26.437	348	235	9	4	342	188	523	1.34e-22	99.0
MS.gene65364.t1	MTR_1569s0010	27.954	347	226	9	13	350	188	519	1.56e-22	99.0
MS.gene65364.t1	MTR_2g105570	28.530	347	216	12	7	342	190	515	1.97e-22	98.6
MS.gene65364.t1	MTR_5g007640	26.902	368	222	12	1	339	220	569	2.33e-22	98.6
MS.gene65364.t1	MTR_4g057730	26.136	352	236	10	1	342	180	517	1.19e-21	96.3
MS.gene65364.t1	MTR_1g063120	25.429	350	236	11	4	342	192	527	2.32e-21	95.5
MS.gene65364.t1	MTR_4g005750	28.286	350	213	12	7	342	183	508	8.82e-21	93.6
MS.gene65364.t1	MTR_5g027500	26.503	366	229	14	4	350	208	552	1.42e-20	93.2
MS.gene65364.t1	MTR_3g460770	26.176	340	217	11	2	326	180	500	1.60e-20	93.2
MS.gene65364.t1	MTR_1g090737	26.111	360	228	11	1	344	206	543	1.99e-20	92.8
MS.gene65364.t1	MTR_5g027480	27.606	355	220	16	7	344	198	532	4.31e-20	91.7
MS.gene65364.t1	MTR_4g128337	25.364	343	223	11	4	331	188	512	3.34e-19	89.0
MS.gene65364.t1	MTR_4g057730	25.914	301	203	9	1	291	180	470	6.04e-18	85.1
MS.gene65364.t1	MTR_3g088880	23.446	354	235	11	4	342	199	531	7.44e-18	85.1
MS.gene65364.t1	MTR_3g035130	23.988	346	239	9	13	350	170	499	3.00e-17	83.2
MS.gene65364.t1	MTR_3g088870	22.689	357	237	11	4	342	198	533	9.13e-16	78.6
MS.gene65364.t1	MTR_1g073180	26.184	359	232	11	4	350	181	518	5.91e-15	76.3
MS.gene65364.t1	MTR_1586s0010	23.874	222	161	4	2	216	201	421	1.92e-14	74.3
MS.gene65364.t1	MTR_1g086600	33.793	145	86	4	149	292	438	573	4.55e-14	73.6
MS.gene65364.t1	MTR_7g109830	27.551	196	130	4	100	292	363	549	4.63e-14	73.6
MS.gene65364.t1	MTR_4g057730	25.352	284	192	9	1	274	180	453	5.95e-14	72.8
MS.gene65364.t1	MTR_5g009360	25.356	351	183	13	3	292	219	551	6.78e-14	73.2
MS.gene65364.t1	MTR_5g009360	25.356	351	183	13	3	292	93	425	8.16e-14	72.8
MS.gene65364.t1	MTR_1g073180	25.714	350	228	10	4	342	203	531	2.67e-13	71.2
MS.gene65364.t1	MTR_4g068670	26.638	229	129	7	71	292	352	548	3.55e-13	70.9
MS.gene65364.t1	MTR_5g009350	25.215	349	186	12	3	292	219	551	3.68e-13	70.9
MS.gene65364.t1	MTR_5g009350	25.215	349	186	12	3	292	219	551	3.85e-13	70.9
MS.gene65364.t1	MTR_1054s0020	25.753	299	189	8	10	300	433	706	7.35e-13	70.1
MS.gene65364.t1	MTR_2g030240	24.352	386	227	14	1	338	55	423	1.80e-12	68.6
MS.gene65364.t1	MTR_5g009350	25.072	347	185	12	3	290	219	549	1.92e-12	68.6
MS.gene65364.t1	MTR_2g030240	24.352	386	227	14	1	338	149	517	2.04e-12	68.6
MS.gene65364.t1	MTR_5g009350	25.146	342	181	12	3	285	219	544	2.52e-12	68.2
MS.gene65364.t1	MTR_1g034360	28.481	158	91	6	142	292	408	550	1.01e-11	66.6
MS.gene65364.t1	MTR_7g084850	25.485	361	221	13	7	340	358	697	1.21e-11	66.2
MS.gene65364.t1	MTR_8g099420	25.070	355	179	16	3	292	220	552	8.59e-11	63.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene65364.t1	AT1G20560	48.169	355	171	5	2	350	105	452	1.40e-112	336
MS.gene65364.t1	AT1G20560	48.169	355	171	5	2	350	183	530	1.06e-111	336
MS.gene65364.t1	AT2G17650	48.876	356	168	6	2	350	237	585	2.67e-108	329
MS.gene65364.t1	AT3G16910	43.213	361	186	6	2	350	193	546	1.50e-92	287
MS.gene65364.t1	AT1G76290	43.575	358	185	7	2	350	173	522	2.38e-88	276
MS.gene65364.t1	AT1G65890	40.443	361	195	6	3	348	183	538	1.19e-86	272
MS.gene65364.t1	AT1G66120	41.808	354	193	6	4	349	184	532	2.89e-86	271
MS.gene65364.t1	AT1G65880	40.055	362	196	6	3	348	183	539	6.54e-83	263
MS.gene65364.t1	AT1G75960	41.457	357	194	7	2	350	180	529	1.59e-82	261
MS.gene65364.t1	AT5G16340	40.169	356	199	6	2	350	181	529	1.90e-82	261
MS.gene65364.t1	AT5G16370	39.326	356	202	6	2	350	181	529	2.05e-81	258
MS.gene65364.t1	AT1G77240	39.437	355	203	7	2	350	181	529	2.36e-81	258
MS.gene65364.t1	AT1G21540	38.936	357	205	6	2	350	183	534	3.00e-81	258
MS.gene65364.t1	AT1G21530	38.997	359	204	7	2	350	180	533	7.49e-81	256
MS.gene65364.t1	AT1G21530	38.997	359	202	8	2	350	180	531	9.68e-79	251
MS.gene65364.t1	AT1G68270	34.819	359	188	8	3	348	183	508	1.73e-58	197
MS.gene65364.t1	AT5G63380	28.161	348	225	12	4	342	202	533	3.61e-27	112
MS.gene65364.t1	AT1G20500	28.571	350	220	12	4	342	195	525	8.89e-24	102
MS.gene65364.t1	AT3G21240	27.350	351	227	11	7	344	196	531	2.88e-22	98.2
MS.gene65364.t1	AT4G05160	28.329	353	224	11	4	345	188	522	3.43e-22	97.8
MS.gene65364.t1	AT1G20510	28.011	357	232	12	4	350	187	528	1.92e-21	95.9
MS.gene65364.t1	AT4G19010	25.278	360	235	14	7	350	205	546	2.13e-20	92.8
MS.gene65364.t1	AT3G21240	28.428	299	190	10	7	292	196	483	5.21e-20	91.3
MS.gene65364.t1	AT3G21240	28.428	299	190	10	7	292	196	483	5.21e-20	91.3
MS.gene65364.t1	AT1G51680	27.941	340	217	12	7	333	203	527	7.28e-20	90.9
MS.gene65364.t1	AT1G51680	28.107	338	215	12	7	331	203	525	8.27e-20	90.9
MS.gene65364.t1	AT3G21230	27.221	349	225	10	7	342	211	543	6.80e-19	88.2
MS.gene65364.t1	AT3G21230	27.219	338	217	10	7	331	211	532	9.38e-19	87.8
MS.gene65364.t1	AT1G65060	27.083	336	221	11	7	331	206	528	1.80e-18	87.0
MS.gene65364.t1	AT1G20510	29.252	294	188	10	7	291	190	472	1.83e-18	86.7
MS.gene65364.t1	AT1G51680	28.763	299	189	10	7	292	203	490	2.26e-18	86.7
MS.gene65364.t1	AT5G38120	26.163	344	220	9	13	344	206	527	4.88e-18	85.5
MS.gene65364.t1	AT1G62940	23.932	351	243	7	5	344	180	517	1.83e-17	84.0
MS.gene65364.t1	AT2G47240	26.331	338	182	12	10	292	165	490	1.97e-17	84.0
MS.gene65364.t1	AT2G47240	26.331	338	182	12	10	292	224	549	2.15e-17	84.0
MS.gene65364.t1	AT2G47240	26.331	338	182	12	10	292	224	549	2.15e-17	84.0
MS.gene65364.t1	AT2G47240	26.331	338	182	12	10	292	224	549	2.15e-17	84.0
MS.gene65364.t1	AT5G38120	26.284	331	210	9	13	331	206	514	5.12e-17	82.4
MS.gene65364.t1	AT1G20480	25.978	358	235	13	4	350	211	549	5.56e-17	82.4
MS.gene65364.t1	AT3G48990	26.087	368	191	14	13	344	169	491	2.67e-16	80.5
MS.gene65364.t1	AT5G38120	27.148	291	182	8	13	291	206	478	4.14e-16	79.7
MS.gene65364.t1	AT5G38120	27.148	291	182	8	13	291	206	478	4.14e-16	79.7
MS.gene65364.t1	AT3G21230	27.759	299	191	9	7	292	211	497	1.56e-15	77.8
MS.gene65364.t1	AT1G30520	25.000	332	207	10	7	314	173	486	3.27e-12	67.8
MS.gene65364.t1	AT1G30520	25.000	332	207	10	7	314	173	486	3.27e-12	67.8
MS.gene65364.t1	AT1G20510	27.148	291	185	11	4	278	187	466	3.42e-12	67.8
MS.gene65364.t1	AT4G11030	26.872	227	134	10	82	292	342	552	6.55e-11	63.9
MS.gene65364.t1	AT1G65060	26.471	272	180	10	7	267	206	468	7.90e-11	63.5

Find 60 sgRNAs with CRISPR-Local

Find 75 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGAACACTCTTCATTGTATT+TGG	0.117189	5.1:-14384527	None:intergenic
CTGAATTATGTTGATCAAAA+AGG	0.196037	5.1:+14384464	MS.gene65364:CDS
AAAAGATATTATTTATTCTA+AGG	0.210086	5.1:+14384718	MS.gene65364:CDS
TTCCACTTTCTTACAATAAC+TGG	0.223827	5.1:-14384413	None:intergenic
TGATTATAAACTGCTCCTTT+TGG	0.243384	5.1:-14384002	None:intergenic
TTGCAAACTGTGACATTATT+AGG	0.258350	5.1:+14384267	MS.gene65364:CDS
ATAGGTGAAATCATGTTTAA+AGG	0.270805	5.1:+14384566	MS.gene65364:CDS
CTTGGATTTGATGTTAATAT+TGG	0.274603	5.1:+14384365	MS.gene65364:CDS
ATAGGATCACATTCATTTCT+AGG	0.276426	5.1:-14383945	None:intergenic
TCACCAAACACCACACTCTT+AGG	0.297868	5.1:-14384950	None:intergenic
TAATAGTCGCGAGTGAATTA+AGG	0.299417	5.1:-14384037	None:intergenic
GTGTGGTGCACCTACCCTTC+TGG	0.311889	5.1:+14384238	MS.gene65364:CDS
AACTACACATCAGGCTCAAC+TGG	0.349825	5.1:+14383975	MS.gene65364:CDS
TGAGTTTGTGAGTTCATTAG+AGG	0.375347	5.1:+14384742	MS.gene65364:CDS
TAGGTGAAATCATGTTTAAA+GGG	0.386467	5.1:+14384567	MS.gene65364:CDS
TGAAGCAATTCATGTTCATA+AGG	0.387735	5.1:+14384205	MS.gene65364:CDS
TTTGATGTTAATATTGGTTA+TGG	0.391504	5.1:+14384371	MS.gene65364:CDS
AAAGGGAATACTTCAATGTC+AGG	0.397558	5.1:+14384584	MS.gene65364:CDS
ACCTTACCAGTTGAATTAAG+AGG	0.398367	5.1:-14384977	None:intergenic
TTTAAACATGATTTCACCTA+TGG	0.398368	5.1:-14384564	None:intergenic
AAGGTGAGTGTCACAGTTGC+TGG	0.399927	5.1:+14384302	MS.gene65364:CDS
TTCAAATTGAAAGAACCATT+AGG	0.416142	5.1:-14384686	None:intergenic
GATTTGCCTCTTAATTCAAC+TGG	0.421617	5.1:+14384971	MS.gene65364:CDS
ATTTGGTTAATGCCTGCTCT+TGG	0.425029	5.1:+14384134	MS.gene65364:CDS
GCAATGGATGGTGTTTCATT+TGG	0.447289	5.1:+14384117	MS.gene65364:CDS
TGATGATGGTGACGAGTGTT+TGG	0.449095	5.1:+14384826	MS.gene65364:CDS
ATGAAGAGTGTTCCATATGA+TGG	0.450784	5.1:+14384536	MS.gene65364:CDS
CTTAACAAAGTGGCAGAGCT+TGG	0.451298	5.1:+14384347	MS.gene65364:CDS
TGGTTAATGCCTGCTCTTGG+TGG	0.459143	5.1:+14384137	MS.gene65364:CDS
CTAGGTGTTAGGTTACCTAA+TGG	0.459759	5.1:+14384671	MS.gene65364:CDS
TATGGTATGACTGAAACATT+AGG	0.461838	5.1:+14384389	MS.gene65364:CDS
GGACTAGGGACCTAGGTGTT+AGG	0.465511	5.1:+14384660	MS.gene65364:CDS
GTTCCTAAGAGTGTGGTGTT+TGG	0.467445	5.1:+14384947	MS.gene65364:CDS
GTCCAGTTATTGTAAGAAAG+TGG	0.471102	5.1:+14384411	MS.gene65364:CDS
AGATCAATTAGATGCTCATA+TGG	0.476810	5.1:+14384925	MS.gene65364:CDS
AAAGATATTATTTATTCTAA+GGG	0.478681	5.1:+14384719	MS.gene65364:CDS
AGGGGTTATTGACTTTATGA+TGG	0.478800	5.1:+14384484	MS.gene65364:CDS
GGGATGGTTGGTATAGGACT+AGG	0.479682	5.1:+14384645	MS.gene65364:CDS
ACAGCTACTTTCAAAACCAT+TGG	0.487308	5.1:-14384788	None:intergenic
GTTTGTGAGTTCATTAGAGG+TGG	0.501370	5.1:+14384745	MS.gene65364:CDS
GATGTGTAGTTCACTGATAT+AGG	0.502126	5.1:-14383963	None:intergenic
GCAATAATTTCCAGAAGGGT+AGG	0.508940	5.1:-14384248	None:intergenic
GGCTCAACTGGAATTCCAAA+AGG	0.522211	5.1:+14383987	MS.gene65364:CDS
GCAATTGTGAAATTGAAAGA+TGG	0.524748	5.1:+14384863	MS.gene65364:CDS
GTTGACATGTTTAGATGCAA+TGG	0.528978	5.1:+14384101	MS.gene65364:CDS
ATATCAGTGAACTACACATC+AGG	0.529465	5.1:+14383966	MS.gene65364:CDS
TTTCGATGTGAATCCTATGC+TGG	0.531354	5.1:+14384064	MS.gene65364:CDS
ATGTTTGTGCCACCAAGAGC+AGG	0.540220	5.1:-14384146	None:intergenic
ATTCAAAATTCTTAACAAAG+TGG	0.541410	5.1:+14384337	MS.gene65364:CDS
GTTTGCAATAATTTCCAGAA+GGG	0.591302	5.1:-14384252	None:intergenic
TTCAATTTCACAATTGCACA+AGG	0.596592	5.1:-14384857	None:intergenic
AAGGGAATACTTCAATGTCA+GGG	0.598415	5.1:+14384585	MS.gene65364:CDS
AGTTTGCAATAATTTCCAGA+AGG	0.600004	5.1:-14384253	None:intergenic
TGGTATAGGACTAGGGACCT+AGG	0.607960	5.1:+14384653	MS.gene65364:CDS
CATTAGGTAACCTAACACCT+AGG	0.611239	5.1:-14384670	None:intergenic
GTGGGGAGATATGATGATGA+TGG	0.634328	5.1:+14384812	MS.gene65364:CDS
GGATGGTTGGTATAGGACTA+GGG	0.648496	5.1:+14384646	MS.gene65364:CDS
ACATGTTTAGATGCAATGGA+TGG	0.657007	5.1:+14384105	MS.gene65364:CDS
CATAAGGTAACACATTTGTG+TGG	0.685677	5.1:+14384221	MS.gene65364:CDS
TCATATGGTTCCTAAGAGTG+TGG	0.716052	5.1:+14384940	MS.gene65364:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAGATATTATTTATTCTA+AGG	+	chr5.1:14384718-14384737	MS.gene65364:CDS	10.0%
!!	AAAGATATTATTTATTCTAA+GGG	+	chr5.1:14384719-14384738	MS.gene65364:CDS	10.0%
!!	ATTCAAAATTCTTAACAAAG+TGG	+	chr5.1:14384337-14384356	MS.gene65364:CDS	20.0%
!!	TGAATTATGTTGATCAAAAA+GGG	+	chr5.1:14384465-14384484	MS.gene65364:CDS	20.0%
!!!	TTGTTAAGAATTTTGAATGA+TGG	-	chr5.1:14384335-14384354	None:intergenic	20.0%
!!!	TTTGATGTTAATATTGGTTA+TGG	+	chr5.1:14384371-14384390	MS.gene65364:CDS	20.0%
!	ATAGGTGAAATCATGTTTAA+AGG	+	chr5.1:14384566-14384585	MS.gene65364:CDS	25.0%
!	CTGAATTATGTTGATCAAAA+AGG	+	chr5.1:14384464-14384483	MS.gene65364:CDS	25.0%
!	CTTGGATTTGATGTTAATAT+TGG	+	chr5.1:14384365-14384384	MS.gene65364:CDS	25.0%
!	GAATTATGTTGATCAAAAAG+GGG	+	chr5.1:14384466-14384485	MS.gene65364:CDS	25.0%
!	TAGGTGAAATCATGTTTAAA+GGG	+	chr5.1:14384567-14384586	MS.gene65364:CDS	25.0%
!	TTCAAATTGAAAGAACCATT+AGG	-	chr5.1:14384689-14384708	None:intergenic	25.0%
!	TTTAAACATGATTTCACCTA+TGG	-	chr5.1:14384567-14384586	None:intergenic	25.0%
!!	TATTAGGCATTTTTCTCATA+AGG	+	chr5.1:14384283-14384302	MS.gene65364:CDS	25.0%
	AGATCAATTAGATGCTCATA+TGG	+	chr5.1:14384925-14384944	MS.gene65364:CDS	30.0%
	AGTTTGCAATAATTTCCAGA+AGG	-	chr5.1:14384256-14384275	None:intergenic	30.0%
	ATAGGATCACATTCATTTCT+AGG	-	chr5.1:14383948-14383967	None:intergenic	30.0%
	GCAATTGTGAAATTGAAAGA+TGG	+	chr5.1:14384863-14384882	MS.gene65364:CDS	30.0%
	GTTTGCAATAATTTCCAGAA+GGG	-	chr5.1:14384255-14384274	None:intergenic	30.0%
	TATGGTATGACTGAAACATT+AGG	+	chr5.1:14384389-14384408	MS.gene65364:CDS	30.0%
	TGAAGCAATTCATGTTCATA+AGG	+	chr5.1:14384205-14384224	MS.gene65364:CDS	30.0%
	TTCAATTTCACAATTGCACA+AGG	-	chr5.1:14384860-14384879	None:intergenic	30.0%
	TTCCACTTTCTTACAATAAC+TGG	-	chr5.1:14384416-14384435	None:intergenic	30.0%
	TTGCAAACTGTGACATTATT+AGG	+	chr5.1:14384267-14384286	MS.gene65364:CDS	30.0%
!	TGATTATAAACTGCTCCTTT+TGG	-	chr5.1:14384005-14384024	None:intergenic	30.0%
!!	TGTTTTGTTGAATCATCCAA+TGG	+	chr5.1:14384772-14384791	MS.gene65364:CDS	30.0%
	AAAGGGAATACTTCAATGTC+AGG	+	chr5.1:14384584-14384603	MS.gene65364:CDS	35.0%
	AAGGGAATACTTCAATGTCA+GGG	+	chr5.1:14384585-14384604	MS.gene65364:CDS	35.0%
	ACATGTTTAGATGCAATGGA+TGG	+	chr5.1:14384105-14384124	MS.gene65364:CDS	35.0%
	ATATCAGTGAACTACACATC+AGG	+	chr5.1:14383966-14383985	MS.gene65364:CDS	35.0%
	CATAAGGTAACACATTTGTG+TGG	+	chr5.1:14384221-14384240	MS.gene65364:CDS	35.0%
	GATGTGTAGTTCACTGATAT+AGG	-	chr5.1:14383966-14383985	None:intergenic	35.0%
	GGAACACTCTTCATTGTATT+TGG	-	chr5.1:14384530-14384549	None:intergenic	35.0%
	GTCCAGTTATTGTAAGAAAG+TGG	+	chr5.1:14384411-14384430	MS.gene65364:CDS	35.0%
	GTTGACATGTTTAGATGCAA+TGG	+	chr5.1:14384101-14384120	MS.gene65364:CDS	35.0%
	TAATAGTCGCGAGTGAATTA+AGG	-	chr5.1:14384040-14384059	None:intergenic	35.0%
	TGAGTTTGTGAGTTCATTAG+AGG	+	chr5.1:14384742-14384761	MS.gene65364:CDS	35.0%
!	AAGTGAGTCATGAAGCTTTT+AGG	+	chr5.1:14384624-14384643	MS.gene65364:CDS	35.0%
!	ACAGCTACTTTCAAAACCAT+TGG	-	chr5.1:14384791-14384810	None:intergenic	35.0%
!	AGTGAGTCATGAAGCTTTTA+GGG	+	chr5.1:14384625-14384644	MS.gene65364:CDS	35.0%
!	CCATATGATGGAAAAACCAT+AGG	+	chr5.1:14384548-14384567	MS.gene65364:CDS	35.0%
!	CCTATGGTTTTTCCATCATA+TGG	-	chr5.1:14384551-14384570	None:intergenic	35.0%
!!	AGGGGTTATTGACTTTATGA+TGG	+	chr5.1:14384484-14384503	MS.gene65364:CDS	35.0%
!!	ATCCTATGCTGGTGTTTTTA+TGG	+	chr5.1:14384075-14384094	MS.gene65364:CDS	35.0%
!!	ATGAAGAGTGTTCCATATGA+TGG	+	chr5.1:14384536-14384555	MS.gene65364:CDS	35.0%
!!	TTTTGAAAGTAGCTGTTGTG+GGG	+	chr5.1:14384795-14384814	MS.gene65364:CDS	35.0%
!!!	GTTTTGAAAGTAGCTGTTGT+GGG	+	chr5.1:14384794-14384813	MS.gene65364:CDS	35.0%
	ATTTGGTTAATGCCTGCTCT+TGG	+	chr5.1:14384134-14384153	MS.gene65364:CDS	40.0%
	CATTAGGTAACCTAACACCT+AGG	-	chr5.1:14384673-14384692	None:intergenic	40.0%
	CTAGGTGTTAGGTTACCTAA+TGG	+	chr5.1:14384671-14384690	MS.gene65364:CDS	40.0%
	GCAATAATTTCCAGAAGGGT+AGG	-	chr5.1:14384251-14384270	None:intergenic	40.0%
	GCAATGGATGGTGTTTCATT+TGG	+	chr5.1:14384117-14384136	MS.gene65364:CDS	40.0%
	GTCCATAAAAACACCAGCAT+AGG	-	chr5.1:14384080-14384099	None:intergenic	40.0%
	GTTTGTGAGTTCATTAGAGG+TGG	+	chr5.1:14384745-14384764	MS.gene65364:CDS	40.0%
	TCATATGGTTCCTAAGAGTG+TGG	+	chr5.1:14384940-14384959	MS.gene65364:CDS	40.0%
	TTTCGATGTGAATCCTATGC+TGG	+	chr5.1:14384064-14384083	MS.gene65364:CDS	40.0%
!!	AGTCATGAAGCTTTTAGGGA+TGG	+	chr5.1:14384629-14384648	MS.gene65364:CDS	40.0%
!!	ATGAAGCTTTTAGGGATGGT+TGG	+	chr5.1:14384633-14384652	MS.gene65364:CDS	40.0%
!!	CTTTTAGGGATGGTTGGTAT+AGG	+	chr5.1:14384639-14384658	MS.gene65364:CDS	40.0%
!!!	GGTTTTGAAAGTAGCTGTTG+TGG	+	chr5.1:14384793-14384812	MS.gene65364:CDS	40.0%
	AACTACACATCAGGCTCAAC+TGG	+	chr5.1:14383975-14383994	MS.gene65364:CDS	45.0%
	CTTAACAAAGTGGCAGAGCT+TGG	+	chr5.1:14384347-14384366	MS.gene65364:CDS	45.0%
	GGCTCAACTGGAATTCCAAA+AGG	+	chr5.1:14383987-14384006	MS.gene65364:CDS	45.0%
	TCACCAAACACCACACTCTT+AGG	-	chr5.1:14384953-14384972	None:intergenic	45.0%
!	GGATGGTTGGTATAGGACTA+GGG	+	chr5.1:14384646-14384665	MS.gene65364:CDS	45.0%
!	GTGGGGAGATATGATGATGA+TGG	+	chr5.1:14384812-14384831	MS.gene65364:CDS	45.0%
!	GTTCCTAAGAGTGTGGTGTT+TGG	+	chr5.1:14384947-14384966	MS.gene65364:CDS	45.0%
!!	TGATGATGGTGACGAGTGTT+TGG	+	chr5.1:14384826-14384845	MS.gene65364:CDS	45.0%
	AAGGTGAGTGTCACAGTTGC+TGG	+	chr5.1:14384302-14384321	MS.gene65364:CDS	50.0%
	ATGTTTGTGCCACCAAGAGC+AGG	-	chr5.1:14384149-14384168	None:intergenic	50.0%
	TGGTATAGGACTAGGGACCT+AGG	+	chr5.1:14384653-14384672	MS.gene65364:CDS	50.0%
	TGGTTAATGCCTGCTCTTGG+TGG	+	chr5.1:14384137-14384156	MS.gene65364:CDS	50.0%
!	GGGATGGTTGGTATAGGACT+AGG	+	chr5.1:14384645-14384664	MS.gene65364:CDS	50.0%
	GGACTAGGGACCTAGGTGTT+AGG	+	chr5.1:14384660-14384679	MS.gene65364:CDS	55.0%
	GTGTGGTGCACCTACCCTTC+TGG	+	chr5.1:14384238-14384257	MS.gene65364:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.1	gene	14383942	14384992	14383942	ID=MS.gene65364
chr5.1	mRNA	14383942	14384992	14383942	ID=MS.gene65364.t1;Parent=MS.gene65364
chr5.1	exon	14383942	14384992	14383942	ID=MS.gene65364.t1.exon1;Parent=MS.gene65364.t1
chr5.1	CDS	14383942	14384992	14383942	ID=cds.MS.gene65364.t1;Parent=MS.gene65364.t1

Gene Sequence

>MS.gene65364

ATGCCTAGAAATGAATGTGATCCTATATCAGTGAACTACACATCAGGCTCAACTGGAATTCCAAAAGGAGCAGTTTATAATCATAGAAGTGTCTACCTTAATTCACTCGCGACTATTACTCGTTTCGATGTGAATCCTATGCTGGTGTTTTTATGGACAGTTGACATGTTTAGATGCAATGGATGGTGTTTCATTTGGTTAATGCCTGCTCTTGGTGGCACAAACATTTGTCTTAGAAATGATTTTTCAGCAAAAGATATTTTTGAAGCAATTCATGTTCATAAGGTAACACATTTGTGTGGTGCACCTACCCTTCTGGAAATTATTGCAAACTGTGACATTATTAGGCATTTTTCTCATAAGGTGAGTGTCACAGTTGCTGGTATATTACCATCATTCAAAATTCTTAACAAAGTGGCAGAGCTTGGATTTGATGTTAATATTGGTTATGGTATGACTGAAACATTAGGTCCAGTTATTGTAAGAAAGTGGAAACAAAACTTTGATGATGATATTACAAAGCTGAATTATGTTGATCAAAAAGGGGTTATTGACTTTATGATGGTTGAAGTTGATGTGAAAGATCCAAATACAATGAAGAGTGTTCCATATGATGGAAAAACCATAGGTGAAATCATGTTTAAAGGGAATACTTCAATGTCAGGGTATCTTAAGAGTTCACAAGTGAGTCATGAAGCTTTTAGGGATGGTTGGTATAGGACTAGGGACCTAGGTGTTAGGTTACCTAATGGTTCTTTCAATTTGAAAGATAGAGCAAAAGATATTATTTATTCTAAGGGTGAGTTTGTGAGTTCATTAGAGGTGGAAGCTGTTTTGTTGAATCATCCAATGGTTTTGAAAGTAGCTGTTGTGGGGAGATATGATGATGATGGTGACGAGTGTTTGGTTGAGTCACCTTGTGCAATTGTGAAATTGAAAGATGGATGTAGTGCTAATGTTGAAGATATTATCAAGTTTTGTGAAGATCAATTAGATGCTCATATGGTTCCTAAGAGTGTGGTGTTTGGTGATTTGCCTCTTAATTCAACTG

Protein sequence

>MS.gene65364.t1

MPRNECDPISVNYTSGSTGIPKGAVYNHRSVYLNSLATITRFDVNPMLVFLWTVDMFRCNGWCFIWLMPALGGTNICLRNDFSAKDIFEAIHVHKVTHLCGAPTLLEIIANCDIIRHFSHKVSVTVAGILPSFKILNKVAELGFDVNIGYGMTETLGPVIVRKWKQNFDDDITKLNYVDQKGVIDFMMVEVDVKDPNTMKSVPYDGKTIGEIMFKGNTSMSGYLKSSQVSHEAFRDGWYRTRDLGVRLPNGSFNLKDRAKDIIYSKGEFVSSLEVEAVLLNHPMVLKVAVVGRYDDDGDECLVESPCAIVKLKDGCSANVEDIIKFCEDQLDAHMVPKSVVFGDLPLNST