Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene65297.t1 | RHN54425.1 | 91.7 | 530 | 20 | 2 | 1 | 508 | 26 | 553 | 7.70E-279 | 969.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene65297.t1 | F4HUK6 | 42.1 | 530 | 269 | 8 | 9 | 508 | 9 | 530 | 2.1e-115 | 417.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene65297.t1 | G7K007 | 91.7 | 530 | 20 | 2 | 1 | 508 | 1 | 528 | 5.6e-279 | 969.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050148 | MS.gene65297 | 0.806805 | 6.88E-50 | -1.69E-46 |
MS.gene050149 | MS.gene65297 | 0.804255 | 2.36E-49 | -1.69E-46 |
MS.gene050961 | MS.gene65297 | 0.849948 | 2.33E-60 | -1.69E-46 |
MS.gene051341 | MS.gene65297 | 0.814251 | 1.69E-51 | -1.69E-46 |
MS.gene05156 | MS.gene65297 | 0.827101 | 1.88E-54 | -1.69E-46 |
MS.gene051586 | MS.gene65297 | 0.840792 | 7.02E-58 | -1.69E-46 |
MS.gene052053 | MS.gene65297 | 0.814804 | 1.28E-51 | -1.69E-46 |
MS.gene052559 | MS.gene65297 | 0.81969 | 1.02E-52 | -1.69E-46 |
MS.gene052560 | MS.gene65297 | 0.821433 | 4.05E-53 | -1.69E-46 |
MS.gene053601 | MS.gene65297 | 0.812111 | 5.00E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene65297.t1 | MTR_5g023730 | 91.698 | 530 | 20 | 2 | 1 | 508 | 1 | 528 | 0.0 | 979 |
MS.gene65297.t1 | MTR_5g008800 | 46.053 | 532 | 252 | 9 | 3 | 508 | 2 | 524 | 1.14e-158 | 462 |
MS.gene65297.t1 | MTR_5g008820 | 44.697 | 528 | 257 | 8 | 6 | 508 | 5 | 522 | 3.17e-154 | 451 |
MS.gene65297.t1 | MTR_8g074040 | 44.757 | 534 | 258 | 10 | 3 | 508 | 44 | 568 | 5.34e-149 | 440 |
MS.gene65297.t1 | MTR_8g074120 | 46.996 | 466 | 236 | 6 | 48 | 508 | 20 | 479 | 1.33e-140 | 415 |
MS.gene65297.t1 | MTR_8g074040 | 45.733 | 457 | 233 | 7 | 59 | 508 | 2 | 450 | 4.11e-134 | 397 |
MS.gene65297.t1 | MTR_4g121600 | 39.633 | 545 | 284 | 10 | 3 | 508 | 5 | 543 | 2.20e-129 | 388 |
MS.gene65297.t1 | MTR_2g044180 | 38.574 | 547 | 291 | 10 | 1 | 508 | 3 | 543 | 4.92e-127 | 382 |
MS.gene65297.t1 | MTR_5g076240 | 38.033 | 539 | 292 | 11 | 4 | 508 | 2 | 532 | 9.86e-121 | 365 |
MS.gene65297.t1 | MTR_3g064420 | 38.333 | 540 | 286 | 11 | 4 | 504 | 3 | 534 | 1.51e-119 | 363 |
MS.gene65297.t1 | MTR_5g076220 | 40.556 | 540 | 278 | 12 | 4 | 508 | 2 | 533 | 1.67e-119 | 362 |
MS.gene65297.t1 | MTR_0161s0050 | 40.410 | 537 | 275 | 11 | 9 | 508 | 7 | 535 | 7.16e-116 | 353 |
MS.gene65297.t1 | MTR_5g076200 | 40.152 | 528 | 273 | 12 | 16 | 508 | 14 | 533 | 7.54e-115 | 350 |
MS.gene65297.t1 | MTR_2g044180 | 39.520 | 458 | 255 | 8 | 67 | 508 | 1 | 452 | 5.40e-111 | 338 |
MS.gene65297.t1 | MTR_0803s0020 | 26.293 | 464 | 312 | 12 | 48 | 505 | 288 | 727 | 6.43e-35 | 140 |
MS.gene65297.t1 | MTR_3g460770 | 25.479 | 522 | 307 | 21 | 8 | 484 | 16 | 500 | 4.11e-25 | 109 |
MS.gene65297.t1 | MTR_5g007640 | 25.620 | 484 | 292 | 19 | 46 | 497 | 122 | 569 | 1.29e-24 | 107 |
MS.gene65297.t1 | MTR_8g039720 | 26.013 | 469 | 291 | 18 | 46 | 489 | 90 | 527 | 1.41e-24 | 107 |
MS.gene65297.t1 | MTR_4g077900 | 25.105 | 474 | 306 | 15 | 46 | 502 | 14 | 455 | 1.51e-24 | 107 |
MS.gene65297.t1 | MTR_2g095510 | 26.134 | 463 | 306 | 15 | 46 | 500 | 80 | 514 | 1.23e-23 | 104 |
MS.gene65297.t1 | MTR_1g026310 | 23.013 | 478 | 327 | 12 | 46 | 508 | 93 | 544 | 1.24e-23 | 104 |
MS.gene65297.t1 | MTR_1g063110 | 25.745 | 369 | 250 | 10 | 144 | 500 | 167 | 523 | 3.13e-22 | 100 |
MS.gene65297.t1 | MTR_1569s0010 | 27.954 | 347 | 226 | 9 | 171 | 508 | 188 | 519 | 8.27e-22 | 99.0 |
MS.gene65297.t1 | MTR_2g105570 | 25.690 | 471 | 300 | 19 | 46 | 500 | 79 | 515 | 8.62e-22 | 99.0 |
MS.gene65297.t1 | MTR_4g057730 | 24.684 | 474 | 302 | 16 | 46 | 500 | 80 | 517 | 2.70e-21 | 97.4 |
MS.gene65297.t1 | MTR_1586s0010 | 23.284 | 335 | 239 | 8 | 48 | 374 | 97 | 421 | 3.93e-21 | 96.3 |
MS.gene65297.t1 | MTR_4g005750 | 25.636 | 472 | 293 | 17 | 46 | 500 | 78 | 508 | 5.39e-21 | 96.7 |
MS.gene65297.t1 | MTR_1g063120 | 25.429 | 350 | 236 | 11 | 162 | 500 | 192 | 527 | 1.26e-20 | 95.5 |
MS.gene65297.t1 | MTR_5g027500 | 24.898 | 490 | 310 | 18 | 46 | 508 | 94 | 552 | 1.61e-20 | 95.1 |
MS.gene65297.t1 | MTR_1g090737 | 26.111 | 360 | 228 | 11 | 159 | 502 | 206 | 543 | 1.54e-19 | 92.4 |
MS.gene65297.t1 | MTR_5g027480 | 27.606 | 355 | 220 | 16 | 165 | 502 | 198 | 532 | 2.37e-19 | 91.7 |
MS.gene65297.t1 | MTR_4g128337 | 23.478 | 460 | 305 | 15 | 46 | 489 | 84 | 512 | 7.02e-19 | 90.1 |
MS.gene65297.t1 | MTR_4g057730 | 24.350 | 423 | 269 | 15 | 46 | 449 | 80 | 470 | 6.76e-18 | 86.7 |
MS.gene65297.t1 | MTR_3g088880 | 23.446 | 354 | 235 | 11 | 162 | 500 | 199 | 531 | 1.72e-17 | 85.9 |
MS.gene65297.t1 | MTR_3g035130 | 24.784 | 347 | 235 | 11 | 171 | 508 | 170 | 499 | 7.95e-17 | 83.6 |
MS.gene65297.t1 | MTR_3g088870 | 22.689 | 357 | 237 | 11 | 162 | 500 | 198 | 533 | 2.17e-15 | 79.3 |
MS.gene65297.t1 | MTR_1g073180 | 25.575 | 391 | 253 | 13 | 131 | 508 | 153 | 518 | 3.33e-15 | 78.6 |
MS.gene65297.t1 | MTR_4g068670 | 23.188 | 414 | 242 | 17 | 96 | 450 | 152 | 548 | 1.77e-14 | 76.6 |
MS.gene65297.t1 | MTR_5g009360 | 24.740 | 384 | 208 | 15 | 129 | 450 | 61 | 425 | 2.37e-14 | 75.9 |
MS.gene65297.t1 | MTR_5g009360 | 24.615 | 390 | 213 | 15 | 123 | 450 | 181 | 551 | 2.56e-14 | 76.3 |
MS.gene65297.t1 | MTR_4g057730 | 23.892 | 406 | 258 | 15 | 46 | 432 | 80 | 453 | 3.08e-14 | 75.1 |
MS.gene65297.t1 | MTR_1g086600 | 33.793 | 145 | 86 | 4 | 307 | 450 | 438 | 573 | 9.87e-14 | 74.3 |
MS.gene65297.t1 | MTR_7g109830 | 27.551 | 196 | 130 | 4 | 258 | 450 | 363 | 549 | 1.07e-13 | 74.3 |
MS.gene65297.t1 | MTR_1g073180 | 25.131 | 382 | 249 | 12 | 131 | 500 | 175 | 531 | 1.13e-13 | 73.9 |
MS.gene65297.t1 | MTR_5g009350 | 27.078 | 373 | 183 | 18 | 144 | 450 | 202 | 551 | 2.90e-13 | 72.8 |
MS.gene65297.t1 | MTR_5g009350 | 27.078 | 373 | 183 | 18 | 144 | 450 | 202 | 551 | 3.28e-13 | 72.8 |
MS.gene65297.t1 | MTR_2g030240 | 22.841 | 521 | 304 | 18 | 46 | 510 | 53 | 531 | 4.49e-13 | 72.0 |
MS.gene65297.t1 | MTR_8g099420 | 24.829 | 439 | 239 | 20 | 79 | 450 | 138 | 552 | 6.81e-13 | 71.6 |
MS.gene65297.t1 | MTR_5g009350 | 26.954 | 371 | 182 | 18 | 144 | 448 | 202 | 549 | 1.16e-12 | 70.9 |
MS.gene65297.t1 | MTR_1054s0020 | 25.460 | 326 | 203 | 10 | 144 | 458 | 410 | 706 | 1.42e-12 | 70.9 |
MS.gene65297.t1 | MTR_2g030240 | 24.250 | 400 | 238 | 14 | 159 | 510 | 55 | 437 | 1.81e-12 | 69.7 |
MS.gene65297.t1 | MTR_5g009350 | 27.049 | 366 | 178 | 18 | 144 | 443 | 202 | 544 | 2.12e-12 | 69.7 |
MS.gene65297.t1 | MTR_1g034360 | 28.481 | 158 | 91 | 6 | 300 | 450 | 408 | 550 | 1.39e-11 | 67.4 |
MS.gene65297.t1 | MTR_7g084850 | 25.485 | 361 | 221 | 13 | 165 | 498 | 358 | 697 | 4.05e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene65297.t1 | AT1G20560 | 43.585 | 530 | 261 | 8 | 9 | 508 | 9 | 530 | 3.30e-151 | 444 |
MS.gene65297.t1 | AT2G17650 | 43.446 | 534 | 254 | 11 | 15 | 508 | 60 | 585 | 5.48e-138 | 411 |
MS.gene65297.t1 | AT1G20560 | 44.760 | 458 | 236 | 7 | 60 | 508 | 3 | 452 | 3.38e-135 | 400 |
MS.gene65297.t1 | AT1G76290 | 40.075 | 534 | 279 | 10 | 3 | 508 | 2 | 522 | 9.96e-123 | 370 |
MS.gene65297.t1 | AT3G16910 | 38.476 | 538 | 283 | 10 | 11 | 508 | 17 | 546 | 1.17e-122 | 371 |
MS.gene65297.t1 | AT5G16340 | 39.074 | 540 | 283 | 11 | 3 | 508 | 2 | 529 | 1.79e-122 | 370 |
MS.gene65297.t1 | AT1G66120 | 39.963 | 538 | 281 | 13 | 4 | 507 | 3 | 532 | 6.22e-122 | 369 |
MS.gene65297.t1 | AT5G16370 | 38.519 | 540 | 286 | 11 | 3 | 508 | 2 | 529 | 1.79e-119 | 362 |
MS.gene65297.t1 | AT1G75960 | 39.439 | 535 | 277 | 12 | 9 | 508 | 7 | 529 | 1.49e-117 | 357 |
MS.gene65297.t1 | AT1G65890 | 36.464 | 543 | 299 | 9 | 4 | 506 | 2 | 538 | 7.11e-115 | 351 |
MS.gene65297.t1 | AT1G65880 | 36.929 | 547 | 291 | 11 | 4 | 506 | 3 | 539 | 2.23e-113 | 347 |
MS.gene65297.t1 | AT1G21530 | 37.051 | 529 | 290 | 11 | 15 | 508 | 13 | 533 | 1.24e-111 | 342 |
MS.gene65297.t1 | AT1G21540 | 37.618 | 529 | 288 | 12 | 15 | 508 | 13 | 534 | 4.97e-111 | 340 |
MS.gene65297.t1 | AT1G21530 | 37.051 | 529 | 288 | 12 | 15 | 508 | 13 | 531 | 2.62e-109 | 336 |
MS.gene65297.t1 | AT1G77240 | 36.312 | 526 | 294 | 12 | 15 | 508 | 13 | 529 | 2.89e-107 | 330 |
MS.gene65297.t1 | AT1G68270 | 33.272 | 544 | 285 | 12 | 4 | 506 | 2 | 508 | 3.94e-89 | 283 |
MS.gene65297.t1 | AT5G63380 | 28.161 | 348 | 225 | 12 | 162 | 500 | 202 | 533 | 3.16e-26 | 112 |
MS.gene65297.t1 | AT3G21240 | 25.738 | 474 | 304 | 17 | 46 | 502 | 89 | 531 | 1.12e-24 | 107 |
MS.gene65297.t1 | AT1G20500 | 27.913 | 369 | 236 | 12 | 143 | 500 | 176 | 525 | 1.50e-23 | 104 |
MS.gene65297.t1 | AT3G21240 | 26.303 | 422 | 267 | 16 | 46 | 450 | 89 | 483 | 1.71e-22 | 100 |
MS.gene65297.t1 | AT3G21240 | 26.303 | 422 | 267 | 16 | 46 | 450 | 89 | 483 | 1.71e-22 | 100 |
MS.gene65297.t1 | AT1G51680 | 26.782 | 463 | 296 | 17 | 46 | 491 | 91 | 527 | 2.22e-22 | 100 |
MS.gene65297.t1 | AT1G51680 | 26.898 | 461 | 294 | 17 | 46 | 489 | 91 | 525 | 2.69e-22 | 100 |
MS.gene65297.t1 | AT1G20510 | 26.059 | 472 | 308 | 17 | 47 | 506 | 84 | 526 | 6.34e-22 | 99.8 |
MS.gene65297.t1 | AT4G05160 | 28.367 | 349 | 221 | 11 | 163 | 500 | 189 | 519 | 1.31e-21 | 98.6 |
MS.gene65297.t1 | AT1G51680 | 27.251 | 422 | 268 | 15 | 46 | 450 | 91 | 490 | 5.11e-21 | 96.3 |
MS.gene65297.t1 | AT4G19010 | 23.218 | 491 | 306 | 19 | 46 | 508 | 99 | 546 | 6.70e-20 | 93.6 |
MS.gene65297.t1 | AT1G65060 | 25.164 | 457 | 300 | 15 | 46 | 489 | 101 | 528 | 1.40e-19 | 92.4 |
MS.gene65297.t1 | AT5G38120 | 25.105 | 474 | 301 | 14 | 46 | 502 | 91 | 527 | 1.52e-19 | 92.4 |
MS.gene65297.t1 | AT1G20510 | 26.087 | 414 | 270 | 14 | 47 | 449 | 84 | 472 | 3.93e-19 | 90.5 |
MS.gene65297.t1 | AT1G20480 | 24.583 | 480 | 315 | 18 | 46 | 508 | 100 | 549 | 4.48e-19 | 90.9 |
MS.gene65297.t1 | AT5G38120 | 25.163 | 461 | 291 | 14 | 46 | 489 | 91 | 514 | 8.44e-19 | 89.7 |
MS.gene65297.t1 | AT3G21230 | 27.221 | 349 | 225 | 10 | 165 | 500 | 211 | 543 | 3.59e-18 | 88.2 |
MS.gene65297.t1 | AT5G38120 | 25.653 | 421 | 263 | 13 | 46 | 449 | 91 | 478 | 6.36e-18 | 87.0 |
MS.gene65297.t1 | AT5G38120 | 25.653 | 421 | 263 | 13 | 46 | 449 | 91 | 478 | 6.36e-18 | 87.0 |
MS.gene65297.t1 | AT3G21230 | 27.219 | 338 | 217 | 10 | 165 | 489 | 211 | 532 | 7.64e-18 | 87.0 |
MS.gene65297.t1 | AT2G47240 | 25.405 | 370 | 209 | 12 | 136 | 450 | 133 | 490 | 2.03e-17 | 85.9 |
MS.gene65297.t1 | AT2G47240 | 25.405 | 370 | 209 | 12 | 136 | 450 | 192 | 549 | 2.22e-17 | 85.9 |
MS.gene65297.t1 | AT2G47240 | 25.405 | 370 | 209 | 12 | 136 | 450 | 192 | 549 | 2.22e-17 | 85.9 |
MS.gene65297.t1 | AT2G47240 | 25.405 | 370 | 209 | 12 | 136 | 450 | 192 | 549 | 2.22e-17 | 85.9 |
MS.gene65297.t1 | AT1G62940 | 22.574 | 474 | 315 | 13 | 46 | 502 | 79 | 517 | 1.25e-16 | 83.2 |
MS.gene65297.t1 | AT3G48990 | 26.087 | 368 | 191 | 14 | 171 | 502 | 169 | 491 | 4.42e-16 | 81.3 |
MS.gene65297.t1 | AT3G21230 | 27.759 | 299 | 191 | 9 | 165 | 450 | 211 | 497 | 6.65e-15 | 77.4 |
MS.gene65297.t1 | AT1G20510 | 25.000 | 408 | 263 | 16 | 47 | 436 | 84 | 466 | 2.37e-13 | 72.8 |
MS.gene65297.t1 | AT1G65060 | 24.427 | 393 | 259 | 14 | 46 | 425 | 101 | 468 | 2.70e-12 | 69.3 |
MS.gene65297.t1 | AT4G11030 | 24.661 | 369 | 197 | 18 | 144 | 450 | 203 | 552 | 6.37e-12 | 68.6 |
MS.gene65297.t1 | AT1G30520 | 25.000 | 332 | 207 | 10 | 165 | 472 | 173 | 486 | 1.69e-11 | 67.0 |
MS.gene65297.t1 | AT1G30520 | 25.000 | 332 | 207 | 10 | 165 | 472 | 173 | 486 | 1.69e-11 | 67.0 |
Find 91 sgRNAs with CRISPR-Local
Find 369 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAACACTCTTCATTGTATT+TGG | 0.117189 | 5.2:-14592469 | None:intergenic |
CTGAATTATGTTGATCAAAA+AGG | 0.196037 | 5.2:+14592406 | MS.gene65297:CDS |
AAAAGATATTATTTATTCTA+AGG | 0.210086 | 5.2:+14592660 | MS.gene65297:CDS |
TTCCACTTTCTTACAATAAC+TGG | 0.223827 | 5.2:-14592355 | None:intergenic |
GCACACTATGAACTTCATTT+TGG | 0.224185 | 5.2:+14591578 | MS.gene65297:CDS |
TGATTATAAACTGCTCCTTT+TGG | 0.243384 | 5.2:-14591944 | None:intergenic |
AAGAAGTTCATCGTATATTA+AGG | 0.246952 | 5.2:-14591831 | None:intergenic |
TTGCAAACTGTGACATTATT+AGG | 0.258350 | 5.2:+14592209 | MS.gene65297:CDS |
TCATAGTGTGCTGGAGTATT+TGG | 0.268936 | 5.2:-14591566 | None:intergenic |
ATAGGTGAAATCATGTTTAA+AGG | 0.270805 | 5.2:+14592508 | MS.gene65297:CDS |
AGGGTGGCTTGAAATTTCTT+TGG | 0.272452 | 5.2:-14591754 | None:intergenic |
CTTGGATTTGATGTTAATAT+TGG | 0.274603 | 5.2:+14592307 | MS.gene65297:CDS |
ATAGGATCACATTCATTTCT+AGG | 0.276426 | 5.2:-14591887 | None:intergenic |
GTTGGCCATGATCTTGTATT+AGG | 0.280602 | 5.2:-14591784 | None:intergenic |
ACACAGTGGCTGCTCGTTCT+AGG | 0.291086 | 5.2:-14587103 | None:intergenic |
TCACCAAACACCACACTCTT+AGG | 0.297868 | 5.2:-14592892 | None:intergenic |
TAATAGTCGCGAGTGAATTA+AGG | 0.299417 | 5.2:-14591979 | None:intergenic |
GTGTGGTGCACCTACCCTTC+TGG | 0.311889 | 5.2:+14592180 | MS.gene65297:CDS |
AACTACACATCAGGCTCAAC+TGG | 0.349825 | 5.2:+14591917 | MS.gene65297:CDS |
AACAACATTAGCATTAATAT+TGG | 0.350853 | 5.2:+14591652 | MS.gene65297:CDS |
GGGTGGCTTGAAATTTCTTT+GGG | 0.360504 | 5.2:-14591753 | None:intergenic |
TGAGTTTGTGAGTTCATTAG+AGG | 0.375347 | 5.2:+14592684 | MS.gene65297:CDS |
GAGGTATATCTTTCACTAGT+TGG | 0.380173 | 5.2:-14591802 | None:intergenic |
TAGGTGAAATCATGTTTAAA+GGG | 0.386467 | 5.2:+14592509 | MS.gene65297:CDS |
TGAAGCAATTCATGTTCATA+AGG | 0.387735 | 5.2:+14592147 | MS.gene65297:CDS |
TTTGATGTTAATATTGGTTA+TGG | 0.391504 | 5.2:+14592313 | MS.gene65297:CDS |
GTCAACTTAGGAATTTCTAA+TGG | 0.391935 | 5.2:+14587217 | MS.gene65297:intron |
TTATAAACAGGTTGCAACTT+TGG | 0.394543 | 5.2:+14591541 | MS.gene65297:intron |
AAAGGGAATACTTCAATGTC+AGG | 0.397558 | 5.2:+14592526 | MS.gene65297:CDS |
ACCTTACCAGTTGAATTAAG+AGG | 0.398367 | 5.2:-14592919 | None:intergenic |
TTTAAACATGATTTCACCTA+TGG | 0.398368 | 5.2:-14592506 | None:intergenic |
AAGGTGAGTGTCACAGTTGC+TGG | 0.399927 | 5.2:+14592244 | MS.gene65297:CDS |
ATGTTGTTGCATCTAGTTTG+AGG | 0.405861 | 5.2:-14591637 | None:intergenic |
ATACGATGAACTTCTTGAAA+AGG | 0.413737 | 5.2:+14591838 | MS.gene65297:CDS |
TTCAAATTGAAAGAACCATT+AGG | 0.416142 | 5.2:-14592628 | None:intergenic |
GATTTGCCTCTTAATTCAAC+TGG | 0.421617 | 5.2:+14592913 | MS.gene65297:CDS |
ATTTGGTTAATGCCTGCTCT+TGG | 0.425029 | 5.2:+14592076 | MS.gene65297:CDS |
ATCTTGTATTAGGACAATAA+AGG | 0.426401 | 5.2:-14591774 | None:intergenic |
GCAATGGATGGTGTTTCATT+TGG | 0.447289 | 5.2:+14592059 | MS.gene65297:CDS |
TGATGATGGTGACGAGTGTT+TGG | 0.449095 | 5.2:+14592768 | MS.gene65297:CDS |
GAACGAGCAGCCACTGTGTA+TGG | 0.449210 | 5.2:+14587107 | MS.gene65297:CDS |
ATGAAGAGTGTTCCATATGA+TGG | 0.450784 | 5.2:+14592478 | MS.gene65297:CDS |
CTTAACAAAGTGGCAGAGCT+TGG | 0.451298 | 5.2:+14592289 | MS.gene65297:CDS |
AACATGATCATTGTAGATGA+TGG | 0.453182 | 5.2:-14587141 | None:intergenic |
TGGTTAATGCCTGCTCTTGG+TGG | 0.459143 | 5.2:+14592079 | MS.gene65297:CDS |
CTAGGTGTTAGGTTACCTAA+TGG | 0.459759 | 5.2:+14592613 | MS.gene65297:CDS |
TATGGTATGACTGAAACATT+AGG | 0.461838 | 5.2:+14592331 | MS.gene65297:CDS |
GGACTAGGGACCTAGGTGTT+AGG | 0.465511 | 5.2:+14592602 | MS.gene65297:CDS |
GTTCCTAAGAGTGTGGTGTT+TGG | 0.467445 | 5.2:+14592889 | MS.gene65297:CDS |
GTCCAGTTATTGTAAGAAAG+TGG | 0.471102 | 5.2:+14592353 | MS.gene65297:CDS |
TACGATGAACTTCTTGAAAA+GGG | 0.473555 | 5.2:+14591839 | MS.gene65297:CDS |
AGATCAATTAGATGCTCATA+TGG | 0.476810 | 5.2:+14592867 | MS.gene65297:CDS |
AAAGATATTATTTATTCTAA+GGG | 0.478681 | 5.2:+14592661 | MS.gene65297:CDS |
AGGGGTTATTGACTTTATGA+TGG | 0.478800 | 5.2:+14592426 | MS.gene65297:CDS |
GGGATGGTTGGTATAGGACT+AGG | 0.479682 | 5.2:+14592587 | MS.gene65297:CDS |
ACAGCTACTTTCAAAACCAT+TGG | 0.487308 | 5.2:-14592730 | None:intergenic |
ATTGTCCTAATACAAGATCA+TGG | 0.490140 | 5.2:+14591779 | MS.gene65297:CDS |
TCTTGTATTAGGACAATAAA+GGG | 0.497609 | 5.2:-14591773 | None:intergenic |
GTTTGTGAGTTCATTAGAGG+TGG | 0.501370 | 5.2:+14592687 | MS.gene65297:CDS |
GATGTGTAGTTCACTGATAT+AGG | 0.502126 | 5.2:-14591905 | None:intergenic |
GACCTGGTTGAGTGCTCTAA+AGG | 0.506891 | 5.2:+14587050 | MS.gene65297:CDS |
GCAATAATTTCCAGAAGGGT+AGG | 0.508940 | 5.2:-14592190 | None:intergenic |
GGCTCAACTGGAATTCCAAA+AGG | 0.522211 | 5.2:+14591929 | MS.gene65297:CDS |
GCAATTGTGAAATTGAAAGA+TGG | 0.524748 | 5.2:+14592805 | MS.gene65297:CDS |
GTTGACATGTTTAGATGCAA+TGG | 0.528978 | 5.2:+14592043 | MS.gene65297:CDS |
ATATCAGTGAACTACACATC+AGG | 0.529465 | 5.2:+14591908 | MS.gene65297:CDS |
TTTCGATGTGAATCCTATGC+TGG | 0.531354 | 5.2:+14592006 | MS.gene65297:CDS |
ATGTTTGTGCCACCAAGAGC+AGG | 0.540220 | 5.2:-14592088 | None:intergenic |
ATTCAAAATTCTTAACAAAG+TGG | 0.541410 | 5.2:+14592279 | MS.gene65297:CDS |
GAAATAATAGCACCTGCCAT+TGG | 0.541429 | 5.2:-14591605 | None:intergenic |
CTCAACCAGGTCTTGTGTCA+TGG | 0.545213 | 5.2:-14587039 | None:intergenic |
AAATGAAGTTCATAGTGTGC+TGG | 0.549199 | 5.2:-14591575 | None:intergenic |
AGGAAACTGATCGGTGTCAA+AGG | 0.571406 | 5.2:-14587083 | None:intergenic |
GTTTGCAATAATTTCCAGAA+GGG | 0.591302 | 5.2:-14592194 | None:intergenic |
AACCTTTAGAGCACTCAACC+AGG | 0.592689 | 5.2:-14587052 | None:intergenic |
CGTTACCATGACACAAGACC+TGG | 0.596346 | 5.2:+14587034 | None:intergenic |
TTCAATTTCACAATTGCACA+AGG | 0.596592 | 5.2:-14592799 | None:intergenic |
TCGTATATTAAGGTATCTTG+AGG | 0.597008 | 5.2:-14591821 | None:intergenic |
AAGGGAATACTTCAATGTCA+GGG | 0.598415 | 5.2:+14592527 | MS.gene65297:CDS |
AGTTTGCAATAATTTCCAGA+AGG | 0.600004 | 5.2:-14592195 | None:intergenic |
TGGTATAGGACTAGGGACCT+AGG | 0.607960 | 5.2:+14592595 | MS.gene65297:CDS |
CATTAGGTAACCTAACACCT+AGG | 0.611239 | 5.2:-14592612 | None:intergenic |
AGCCACTGTGTATGGTGACA+AGG | 0.623725 | 5.2:+14587115 | MS.gene65297:CDS |
GTGGGGAGATATGATGATGA+TGG | 0.634328 | 5.2:+14592754 | MS.gene65297:CDS |
GGATGGTTGGTATAGGACTA+GGG | 0.648496 | 5.2:+14592588 | MS.gene65297:CDS |
GCTCGTTCTAGGAAACTGAT+CGG | 0.653949 | 5.2:-14587092 | None:intergenic |
ACATGTTTAGATGCAATGGA+TGG | 0.657007 | 5.2:+14592047 | MS.gene65297:CDS |
TGTATTAGGACAATAAAGGG+TGG | 0.682560 | 5.2:-14591770 | None:intergenic |
CATAAGGTAACACATTTGTG+TGG | 0.685677 | 5.2:+14592163 | MS.gene65297:CDS |
TCATATGGTTCCTAAGAGTG+TGG | 0.716052 | 5.2:+14592882 | MS.gene65297:CDS |
AACCTTGTCACCATACACAG+TGG | 0.766651 | 5.2:-14587117 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTTAATATTTATAATTA+GGG | - | chr5.2:14588147-14588166 | None:intergenic | 0.0% |
!! | AAAAGATATTATTTATTCTA+AGG | + | chr5.2:14592660-14592679 | MS.gene65297:CDS | 10.0% |
!! | AAAGATATTATTTATTCTAA+GGG | + | chr5.2:14592661-14592680 | MS.gene65297:CDS | 10.0% |
!! | GTGAAATTAATATTTATATT+AGG | - | chr5.2:14588354-14588373 | None:intergenic | 10.0% |
!! | TAATCAAAACATAAATTAAA+AGG | - | chr5.2:14591396-14591415 | None:intergenic | 10.0% |
!! | TATAATATATAATATATGCA+AGG | + | chr5.2:14590782-14590801 | MS.gene65297:intron | 10.0% |
!! | TTATATCGTTAAAAATAAAA+AGG | + | chr5.2:14588487-14588506 | MS.gene65297:intron | 10.0% |
!!! | AATTTATTTTTTTTAAATGG+TGG | + | chr5.2:14590384-14590403 | MS.gene65297:intron | 10.0% |
!!! | ATATGTTGTTATTTTTTTAT+TGG | - | chr5.2:14590874-14590893 | None:intergenic | 10.0% |
!!! | TCATATATAGATATTTTTTT+TGG | + | chr5.2:14589104-14589123 | MS.gene65297:intron | 10.0% |
!!! | TTTTACATTTTTAATATGAA+CGG | - | chr5.2:14588536-14588555 | None:intergenic | 10.0% |
!! | AAAAAAAACACGTTATTAAA+TGG | + | chr5.2:14589259-14589278 | MS.gene65297:intron | 15.0% |
!! | AAAATAATAATAAATCTGTG+TGG | - | chr5.2:14589344-14589363 | None:intergenic | 15.0% |
!! | AAAATATTAAGCTAGATATA+TGG | - | chr5.2:14593102-14593121 | None:intergenic | 15.0% |
!! | AAATATTAAGCTAGATATAT+GGG | - | chr5.2:14593101-14593120 | None:intergenic | 15.0% |
!! | AATATAGAATTCAAAATACA+AGG | + | chr5.2:14591002-14591021 | MS.gene65297:intron | 15.0% |
!! | AGTGCATATTTAATTATTAA+GGG | + | chr5.2:14590464-14590483 | MS.gene65297:intron | 15.0% |
!! | ATTAAAAGAAGAAAGTTTAT+CGG | - | chr5.2:14588419-14588438 | None:intergenic | 15.0% |
!! | GTAAACAAATTAAAAACTAA+GGG | + | chr5.2:14589731-14589750 | MS.gene65297:intron | 15.0% |
!! | TAATAAAAACTTACTTCTTT+GGG | - | chr5.2:14588010-14588029 | None:intergenic | 15.0% |
!! | TAATATAAGAAAGAAAATTG+AGG | - | chr5.2:14591524-14591543 | None:intergenic | 15.0% |
!! | TAATTAGATTAGAGATTAAA+TGG | - | chr5.2:14593161-14593180 | None:intergenic | 15.0% |
!! | TAGTGCATATTTAATTATTA+AGG | + | chr5.2:14590463-14590482 | MS.gene65297:intron | 15.0% |
!! | TGTAAACAAATTAAAAACTA+AGG | + | chr5.2:14589730-14589749 | MS.gene65297:intron | 15.0% |
!! | TTAATAAAAACTTACTTCTT+TGG | - | chr5.2:14588011-14588030 | None:intergenic | 15.0% |
!! | TTACATTGATACATTATATT+TGG | - | chr5.2:14587363-14587382 | None:intergenic | 15.0% |
!! | TTCTTTCTTATATTATAAAC+AGG | + | chr5.2:14591529-14591548 | MS.gene65297:intron | 15.0% |
!!! | AAATGTTTTTGTCTAAATTT+TGG | + | chr5.2:14587462-14587481 | MS.gene65297:intron | 15.0% |
!!! | AACTTTTGTAAATAATCAAA+TGG | - | chr5.2:14591173-14591192 | None:intergenic | 15.0% |
!!! | AAGTAAGTTTTTATTAAAAG+TGG | + | chr5.2:14588014-14588033 | MS.gene65297:intron | 15.0% |
!!! | AATAACATGTTTTTTCTTAA+TGG | - | chr5.2:14589228-14589247 | None:intergenic | 15.0% |
!!! | AATAACGTGTTTTTTTTTAA+GGG | - | chr5.2:14589256-14589275 | None:intergenic | 15.0% |
!!! | ACGATATAATTTTACAAATT+TGG | - | chr5.2:14588769-14588788 | None:intergenic | 15.0% |
!!! | AGAGAAAATATTAAAAGTAT+TGG | + | chr5.2:14592958-14592977 | MS.gene65297:intron | 15.0% |
!!! | AGTATAAATTTTTCTTTTCA+AGG | + | chr5.2:14590523-14590542 | MS.gene65297:intron | 15.0% |
!!! | AGTGTATATTTTAACAAAAA+AGG | - | chr5.2:14589896-14589915 | None:intergenic | 15.0% |
!!! | ATATTTTAACAAAAAAGGAA+AGG | - | chr5.2:14589891-14589910 | None:intergenic | 15.0% |
!!! | CTTGTTTCATATTTTTTATT+AGG | - | chr5.2:14590220-14590239 | None:intergenic | 15.0% |
!!! | GAGAAAATATTAAAAGTATT+GGG | + | chr5.2:14592959-14592978 | MS.gene65297:intron | 15.0% |
!!! | TAATAACGTGTTTTTTTTTA+AGG | - | chr5.2:14589257-14589276 | None:intergenic | 15.0% |
!!! | TATAGGAAAAAAATTCTTTT+CGG | - | chr5.2:14591491-14591510 | None:intergenic | 15.0% |
!!! | TGATTTAAAACATTCAAAAA+AGG | + | chr5.2:14588636-14588655 | MS.gene65297:intron | 15.0% |
!! | AAAAATAATCTAACACACTT+CGG | + | chr5.2:14590061-14590080 | MS.gene65297:intron | 20.0% |
!! | AAAATTATATCGTTACGAAA+AGG | + | chr5.2:14588776-14588795 | MS.gene65297:intron | 20.0% |
!! | AACAACATTAGCATTAATAT+TGG | + | chr5.2:14591652-14591671 | MS.gene65297:CDS | 20.0% |
!! | AATTAACTGGTTATTCTAAT+TGG | + | chr5.2:14587587-14587606 | MS.gene65297:intron | 20.0% |
!! | ATAAATAAAACAAGGCAAAA+TGG | + | chr5.2:14593254-14593273 | MS.gene65297:intron | 20.0% |
!! | ATATTTAATTATTAAGGGAG+AGG | + | chr5.2:14590469-14590488 | MS.gene65297:intron | 20.0% |
!! | ATTCAAAATTCTTAACAAAG+TGG | + | chr5.2:14592279-14592298 | MS.gene65297:CDS | 20.0% |
!! | ATTGAAGAACATAATTCTAT+TGG | - | chr5.2:14587555-14587574 | None:intergenic | 20.0% |
!! | GAGAATACAAATTAATATAG+TGG | + | chr5.2:14591211-14591230 | MS.gene65297:intron | 20.0% |
!! | GAGGAATATAATAAAAAACT+TGG | + | chr5.2:14591024-14591043 | MS.gene65297:intron | 20.0% |
!! | GCATGATAATAAATAAAACA+AGG | + | chr5.2:14593246-14593265 | MS.gene65297:intron | 20.0% |
!! | TATTAATTTCACTGAATCAA+CGG | + | chr5.2:14588362-14588381 | MS.gene65297:intron | 20.0% |
!! | TATTTAATTATTAAGGGAGA+GGG | + | chr5.2:14590470-14590489 | MS.gene65297:intron | 20.0% |
!! | TGAATTATGTTGATCAAAAA+GGG | + | chr5.2:14592407-14592426 | MS.gene65297:CDS | 20.0% |
!!! | AAAATATTAAAAGTATTGGG+TGG | + | chr5.2:14592962-14592981 | MS.gene65297:intron | 20.0% |
!!! | AAATAAAGTTTTTCAAAGAC+AGG | - | chr5.2:14589290-14589309 | None:intergenic | 20.0% |
!!! | AAATTTTTCTTTTCAAGGAA+GGG | + | chr5.2:14590528-14590547 | MS.gene65297:intron | 20.0% |
!!! | ATTTTTTATTAGGCTTTTCT+TGG | - | chr5.2:14590210-14590229 | None:intergenic | 20.0% |
!!! | TAAATTTTTCTTTTCAAGGA+AGG | + | chr5.2:14590527-14590546 | MS.gene65297:intron | 20.0% |
!!! | TCTAATATATTTTGAATGAG+AGG | - | chr5.2:14589926-14589945 | None:intergenic | 20.0% |
!!! | TGTTGTTATTTTTTTATTGG+TGG | - | chr5.2:14590871-14590890 | None:intergenic | 20.0% |
!!! | TTGTTAAGAATTTTGAATGA+TGG | - | chr5.2:14592277-14592296 | None:intergenic | 20.0% |
!!! | TTTCATATTTTTTTTCCTTC+AGG | + | chr5.2:14589000-14589019 | MS.gene65297:intron | 20.0% |
!!! | TTTGATGTTAATATTGGTTA+TGG | + | chr5.2:14592313-14592332 | MS.gene65297:CDS | 20.0% |
!!! | TTTTGTAAATAATCAAATGG+AGG | - | chr5.2:14591170-14591189 | None:intergenic | 20.0% |
! | AAGAAGTTCATCGTATATTA+AGG | - | chr5.2:14591834-14591853 | None:intergenic | 25.0% |
! | AAGATTATTACATGCTTGTT+TGG | - | chr5.2:14593286-14593305 | None:intergenic | 25.0% |
! | ACCAATAAAAAAATTGTTCC+GGG | + | chr5.2:14590829-14590848 | MS.gene65297:intron | 25.0% |
! | ACGTAATTAGCAGTTAATTA+TGG | + | chr5.2:14587947-14587966 | MS.gene65297:intron | 25.0% |
! | ATAGAATTCAAAATACAAGG+AGG | + | chr5.2:14591005-14591024 | MS.gene65297:intron | 25.0% |
! | ATAGGTGAAATCATGTTTAA+AGG | + | chr5.2:14592508-14592527 | MS.gene65297:CDS | 25.0% |
! | ATCGATTACACTAATCAATT+TGG | + | chr5.2:14587878-14587897 | MS.gene65297:intron | 25.0% |
! | ATCTTGTATTAGGACAATAA+AGG | - | chr5.2:14591777-14591796 | None:intergenic | 25.0% |
! | ATGTAATTCAAACATCTTTG+AGG | - | chr5.2:14589866-14589885 | None:intergenic | 25.0% |
! | ATTATATTTGGTCATGAAGA+GGG | - | chr5.2:14587351-14587370 | None:intergenic | 25.0% |
! | ATTGTTACACTATAGTAGAT+TGG | + | chr5.2:14589684-14589703 | MS.gene65297:intron | 25.0% |
! | CACCAATAAAAAAATTGTTC+CGG | + | chr5.2:14590828-14590847 | MS.gene65297:intron | 25.0% |
! | CATTAGAATGTCTTCAATAT+GGG | + | chr5.2:14589314-14589333 | MS.gene65297:intron | 25.0% |
! | CTGAATTATGTTGATCAAAA+AGG | + | chr5.2:14592406-14592425 | MS.gene65297:CDS | 25.0% |
! | CTTGGATTTGATGTTAATAT+TGG | + | chr5.2:14592307-14592326 | MS.gene65297:CDS | 25.0% |
! | GAAAGATAATGCAATGAATA+TGG | - | chr5.2:14590949-14590968 | None:intergenic | 25.0% |
! | GAATTAATGTAGTCATCATA+GGG | - | chr5.2:14587274-14587293 | None:intergenic | 25.0% |
! | GAATTATGTTGATCAAAAAG+GGG | + | chr5.2:14592408-14592427 | MS.gene65297:CDS | 25.0% |
! | GATGATTGAACTTGATTATT+GGG | + | chr5.2:14587698-14587717 | MS.gene65297:intron | 25.0% |
! | GGTAAACTGTAACAAAATAT+TGG | - | chr5.2:14587534-14587553 | None:intergenic | 25.0% |
! | GGTCATTAAATCATACAATT+AGG | + | chr5.2:14587647-14587666 | MS.gene65297:intron | 25.0% |
! | GTTGGTTAGGTAAATTTATT+TGG | - | chr5.2:14591449-14591468 | None:intergenic | 25.0% |
! | TAAATAGTATTCCAGAGTAT+TGG | + | chr5.2:14587977-14587996 | MS.gene65297:intron | 25.0% |
! | TAGGTGAAATCATGTTTAAA+GGG | + | chr5.2:14592509-14592528 | MS.gene65297:CDS | 25.0% |
! | TATAATGAGCAATTACATGT+TGG | - | chr5.2:14591467-14591486 | None:intergenic | 25.0% |
! | TATATAATATATGCAAGGTC+CGG | + | chr5.2:14590787-14590806 | MS.gene65297:intron | 25.0% |
! | TCTTGTATTAGGACAATAAA+GGG | - | chr5.2:14591776-14591795 | None:intergenic | 25.0% |
! | TGTAATTCAAACATCTTTGA+GGG | + | chr5.2:14590584-14590603 | MS.gene65297:intron | 25.0% |
! | TGTAATTCAAACATCTTTGA+GGG | - | chr5.2:14590603-14590584 | None:intergenic | 25.0% |
! | TGTAATTCAAGCATCTTATA+GGG | + | chr5.2:14590494-14590513 | MS.gene65297:intron | 25.0% |
! | TTATCAATAGACCAAGTATT+TGG | + | chr5.2:14588946-14588965 | MS.gene65297:intron | 25.0% |
! | TTCAAATTGAAAGAACCATT+AGG | - | chr5.2:14592631-14592650 | None:intergenic | 25.0% |
! | TTGTAATTCAAGCATCTTAT+AGG | + | chr5.2:14590493-14590512 | MS.gene65297:intron | 25.0% |
! | TTTAAACATGATTTCACCTA+TGG | - | chr5.2:14592509-14592528 | None:intergenic | 25.0% |
!! | AAATGTAGCTTGTCTAATTT+CGG | + | chr5.2:14591250-14591269 | MS.gene65297:intron | 25.0% |
!! | ATGATCATGTTAGATTTTCT+TGG | + | chr5.2:14587153-14587172 | MS.gene65297:intron | 25.0% |
!! | TAATGACCAATTTAAAACCA+TGG | - | chr5.2:14587635-14587654 | None:intergenic | 25.0% |
!! | TATTAGGCATTTTTCTCATA+AGG | + | chr5.2:14592225-14592244 | MS.gene65297:CDS | 25.0% |
!!! | AACAATTTTTTTATTGGTGG+TGG | - | chr5.2:14590827-14590846 | None:intergenic | 25.0% |
!!! | AATTTTTCTTTTCAAGGAAG+GGG | + | chr5.2:14590529-14590548 | MS.gene65297:intron | 25.0% |
!!! | AGTGCATATTTTAACATAAG+AGG | + | chr5.2:14590552-14590571 | MS.gene65297:intron | 25.0% |
!!! | AGTGTAGATTTTAACATAAG+AGG | - | chr5.2:14589999-14590018 | None:intergenic | 25.0% |
!!! | ATAATTAGGGTCTTGTTAAT+CGG | - | chr5.2:14588134-14588153 | None:intergenic | 25.0% |
!!! | ATGTATTTCAAGTTTCTCTT+AGG | - | chr5.2:14589968-14589987 | None:intergenic | 25.0% |
!!! | GAATTCCAAATTTTTCAAAG+GGG | + | chr5.2:14591354-14591373 | MS.gene65297:intron | 25.0% |
!!! | GGAATTCCAAATTTTTCAAA+GGG | + | chr5.2:14591353-14591372 | MS.gene65297:intron | 25.0% |
!!! | GTGCATATTTTAACATAAGA+GGG | + | chr5.2:14590553-14590572 | MS.gene65297:intron | 25.0% |
!!! | GTGTAGATTTTAACATAAGA+GGG | - | chr5.2:14589998-14590017 | None:intergenic | 25.0% |
!!! | TCATGAAAACTTGTTTGTTT+TGG | - | chr5.2:14588221-14588240 | None:intergenic | 25.0% |
!!! | TGCATATTTTAACATAAGAG+GGG | + | chr5.2:14590554-14590573 | MS.gene65297:intron | 25.0% |
!!! | TGGAATTCCAAATTTTTCAA+AGG | + | chr5.2:14591352-14591371 | MS.gene65297:intron | 25.0% |
!!! | TGTAGATTTTAACATAAGAG+GGG | - | chr5.2:14589997-14590016 | None:intergenic | 25.0% |
!!! | TGTATTTCAAGTTTCTCTTA+GGG | - | chr5.2:14589967-14589986 | None:intergenic | 25.0% |
!!! | TGTTATTTTTTTATTGGTGG+TGG | - | chr5.2:14590868-14590887 | None:intergenic | 25.0% |
!!! | TTCTATCCATGGTTTTAAAT+TGG | + | chr5.2:14587626-14587645 | MS.gene65297:intron | 25.0% |
AAACAGAATGATGTCAGAAA+AGG | - | chr5.2:14589374-14589393 | None:intergenic | 30.0% | |
AAATAGTTAATAAGCTCCAC+AGG | + | chr5.2:14587673-14587692 | MS.gene65297:intron | 30.0% | |
AACATGATCATTGTAGATGA+TGG | - | chr5.2:14587144-14587163 | None:intergenic | 30.0% | |
AATAGACCATGTACAAGAAT+GGG | - | chr5.2:14589612-14589631 | None:intergenic | 30.0% | |
ACAACACATACAACACATTT+GGG | + | chr5.2:14589515-14589534 | MS.gene65297:intron | 30.0% | |
AGAATTATTTCAGATCCTGA+AGG | - | chr5.2:14589018-14589037 | None:intergenic | 30.0% | |
AGAGAGAATGAACTTTGTAA+AGG | - | chr5.2:14588819-14588838 | None:intergenic | 30.0% | |
AGATCAATTAGATGCTCATA+TGG | + | chr5.2:14592867-14592886 | MS.gene65297:CDS | 30.0% | |
AGTTTGCAATAATTTCCAGA+AGG | - | chr5.2:14592198-14592217 | None:intergenic | 30.0% | |
ATAAGGAGAAATCGAAAACA+AGG | - | chr5.2:14589635-14589654 | None:intergenic | 30.0% | |
ATACGATGAACTTCTTGAAA+AGG | + | chr5.2:14591838-14591857 | MS.gene65297:CDS | 30.0% | |
ATAGGATCACATTCATTTCT+AGG | - | chr5.2:14591890-14591909 | None:intergenic | 30.0% | |
ATATAATATATGCAAGGTCC+GGG | + | chr5.2:14590788-14590807 | MS.gene65297:intron | 30.0% | |
ATCTTCTAACTCCAAATACT+TGG | - | chr5.2:14588960-14588979 | None:intergenic | 30.0% | |
ATTCTATAAGCGCGTAATTA+TGG | + | chr5.2:14589033-14589052 | MS.gene65297:intron | 30.0% | |
ATTCTTCTCTTAGACATTTG+TGG | - | chr5.2:14591316-14591335 | None:intergenic | 30.0% | |
ATTGAGGTCTTCATATGTAT+AGG | - | chr5.2:14591508-14591527 | None:intergenic | 30.0% | |
ATTGTCCTAATACAAGATCA+TGG | + | chr5.2:14591779-14591798 | MS.gene65297:CDS | 30.0% | |
CAACCATATTCATTGCATTT+CGG | + | chr5.2:14590977-14590996 | MS.gene65297:intron | 30.0% | |
CATTATATTTGGTCATGAAG+AGG | - | chr5.2:14587352-14587371 | None:intergenic | 30.0% | |
CCAATAAAAAAATTGTTCCG+GGG | + | chr5.2:14590830-14590849 | MS.gene65297:intron | 30.0% | |
CCATATTGAAGACATTCTAA+TGG | - | chr5.2:14589316-14589335 | None:intergenic | 30.0% | |
CCATTAGAATGTCTTCAATA+TGG | + | chr5.2:14589313-14589332 | MS.gene65297:intron | 30.0% | |
CGAATTAATGTAGTCATCAT+AGG | - | chr5.2:14587275-14587294 | None:intergenic | 30.0% | |
CGGAAAAAAAATAGTATTGC+AGG | + | chr5.2:14590081-14590100 | MS.gene65297:intron | 30.0% | |
CTTTAGATGAAATGAAAGCA+GGG | - | chr5.2:14587312-14587331 | None:intergenic | 30.0% | |
GACTTTGATAGAAAACCTAA+TGG | - | chr5.2:14591095-14591114 | None:intergenic | 30.0% | |
GATAAGGTAAGTTAAAGTCT+AGG | - | chr5.2:14587737-14587756 | None:intergenic | 30.0% | |
GCAATTGTGAAATTGAAAGA+TGG | + | chr5.2:14592805-14592824 | MS.gene65297:CDS | 30.0% | |
GGATGATTGAACTTGATTAT+TGG | + | chr5.2:14587697-14587716 | MS.gene65297:intron | 30.0% | |
GTAATTCAAGCATCTTATAG+GGG | + | chr5.2:14590495-14590514 | MS.gene65297:intron | 30.0% | |
GTCAACTTAGGAATTTCTAA+TGG | + | chr5.2:14587217-14587236 | MS.gene65297:intron | 30.0% | |
GTGTAATTCAAACATCTTTG+AGG | + | chr5.2:14590583-14590602 | MS.gene65297:intron | 30.0% | |
GTTTGCAATAATTTCCAGAA+GGG | - | chr5.2:14592197-14592216 | None:intergenic | 30.0% | |
TAACCGAAATGCAATGAATA+TGG | - | chr5.2:14590983-14591002 | None:intergenic | 30.0% | |
TACGATGAACTTCTTGAAAA+GGG | + | chr5.2:14591839-14591858 | MS.gene65297:CDS | 30.0% | |
TATGGTATGACTGAAACATT+AGG | + | chr5.2:14592331-14592350 | MS.gene65297:CDS | 30.0% | |
TCCAGAAGAGAATGAAAATA+AGG | - | chr5.2:14589652-14589671 | None:intergenic | 30.0% | |
TCGTGCATGAATTAATTAAC+TGG | + | chr5.2:14587574-14587593 | MS.gene65297:intron | 30.0% | |
TGAAGCAATTCATGTTCATA+AGG | + | chr5.2:14592147-14592166 | MS.gene65297:CDS | 30.0% | |
TGGTGTGACTCAATTAATTA+AGG | + | chr5.2:14592982-14593001 | MS.gene65297:intron | 30.0% | |
TTATAAACAGGTTGCAACTT+TGG | + | chr5.2:14591541-14591560 | MS.gene65297:intron | 30.0% | |
TTCAATTTCACAATTGCACA+AGG | - | chr5.2:14592802-14592821 | None:intergenic | 30.0% | |
TTCCACTTTCTTACAATAAC+TGG | - | chr5.2:14592358-14592377 | None:intergenic | 30.0% | |
TTGCAAACTGTGACATTATT+AGG | + | chr5.2:14592209-14592228 | MS.gene65297:CDS | 30.0% | |
TTTCTTAATGGCGTAAATTC+TGG | - | chr5.2:14589216-14589235 | None:intergenic | 30.0% | |
! | AAGGCTTTTATATATTGCCA+AGG | + | chr5.2:14588655-14588674 | MS.gene65297:intron | 30.0% |
! | ATAATTTGGAGTCAGTGATA+AGG | - | chr5.2:14587753-14587772 | None:intergenic | 30.0% |
! | TAAAGGCTTTTTGAATTCGA+TGG | - | chr5.2:14588802-14588821 | None:intergenic | 30.0% |
! | TAGATAAACAGTGTTGAACA+CGG | - | chr5.2:14589081-14589100 | None:intergenic | 30.0% |
! | TCGTATATTAAGGTATCTTG+AGG | - | chr5.2:14591824-14591843 | None:intergenic | 30.0% |
! | TGATTATAAACTGCTCCTTT+TGG | - | chr5.2:14591947-14591966 | None:intergenic | 30.0% |
! | TTTGTCCCCTTTGAAAAATT+TGG | - | chr5.2:14591362-14591381 | None:intergenic | 30.0% |
! | TTTTCTGACATCATTCTGTT+TGG | + | chr5.2:14589373-14589392 | MS.gene65297:intron | 30.0% |
!! | GTATTTCAAGTTTCTCTTAG+GGG | - | chr5.2:14589966-14589985 | None:intergenic | 30.0% |
!! | TGTTTTGTTGAATCATCCAA+TGG | + | chr5.2:14592714-14592733 | MS.gene65297:CDS | 30.0% |
!!! | CGGAACAATTTTTTTATTGG+TGG | - | chr5.2:14590830-14590849 | None:intergenic | 30.0% |
!!! | TCCTTATTTTCATTCTCTTC+TGG | + | chr5.2:14589648-14589667 | MS.gene65297:intron | 30.0% |
AAAACATGAAGCACACCATT+AGG | + | chr5.2:14591077-14591096 | MS.gene65297:intron | 35.0% | |
AAAGGGAATACTTCAATGTC+AGG | + | chr5.2:14592526-14592545 | MS.gene65297:CDS | 35.0% | |
AAATGAAGTTCATAGTGTGC+TGG | - | chr5.2:14591578-14591597 | None:intergenic | 35.0% | |
AAGAGGGAACAAACAATAGT+TGG | - | chr5.2:14587335-14587354 | None:intergenic | 35.0% | |
AAGCGCGTAATTATGGAAAA+TGG | + | chr5.2:14589040-14589059 | MS.gene65297:intron | 35.0% | |
AAGGGAATACTTCAATGTCA+GGG | + | chr5.2:14592527-14592546 | MS.gene65297:CDS | 35.0% | |
AAGGTTGAGACATCTTTCAT+AGG | - | chr5.2:14587186-14587205 | None:intergenic | 35.0% | |
AATCCTTAACCAATACTCTG+AGG | + | chr5.2:14588311-14588330 | MS.gene65297:intron | 35.0% | |
AATGTGTTGTATGTGTTGTG+TGG | - | chr5.2:14589514-14589533 | None:intergenic | 35.0% | |
ACAAAACAAATGATGTGGGA+GGG | - | chr5.2:14591282-14591301 | None:intergenic | 35.0% | |
ACAAACTAGTGTTCTATCCA+TGG | + | chr5.2:14587615-14587634 | MS.gene65297:intron | 35.0% | |
ACAAGAATGGGGAAAATACT+TGG | - | chr5.2:14589600-14589619 | None:intergenic | 35.0% | |
ACACATTGTCACTCAATATC+TGG | + | chr5.2:14589487-14589506 | MS.gene65297:intron | 35.0% | |
ACATGTTTAGATGCAATGGA+TGG | + | chr5.2:14592047-14592066 | MS.gene65297:CDS | 35.0% | |
ACCGTACAAAACAAATGATG+TGG | - | chr5.2:14591287-14591306 | None:intergenic | 35.0% | |
ACCTTACCAGTTGAATTAAG+AGG | - | chr5.2:14592922-14592941 | None:intergenic | 35.0% | |
AGAAAGGGGATCTCATAATT+TGG | - | chr5.2:14587767-14587786 | None:intergenic | 35.0% | |
AGAGTTGTGAGATCATTACT+TGG | + | chr5.2:14588242-14588261 | MS.gene65297:intron | 35.0% | |
AGCGCGTAATTATGGAAAAT+GGG | + | chr5.2:14589041-14589060 | MS.gene65297:intron | 35.0% | |
ATAGACCATGTACAAGAATG+GGG | - | chr5.2:14589611-14589630 | None:intergenic | 35.0% | |
ATATCAGTGAACTACACATC+AGG | + | chr5.2:14591908-14591927 | MS.gene65297:CDS | 35.0% | |
ATCGTTTACCAACTCTAACA+TGG | + | chr5.2:14588886-14588905 | MS.gene65297:intron | 35.0% | |
ATGCTTAACCAATGTCATTG+GGG | - | chr5.2:14588198-14588217 | None:intergenic | 35.0% | |
ATTACAACACACACCATTCT+GGG | + | chr5.2:14589412-14589431 | MS.gene65297:intron | 35.0% | |
CAAGAATGGGGAAAATACTT+GGG | - | chr5.2:14589599-14589618 | None:intergenic | 35.0% | |
CACAACACATACAACACATT+TGG | + | chr5.2:14589514-14589533 | MS.gene65297:intron | 35.0% | |
CACATTGTCACTCAATATCT+GGG | + | chr5.2:14589488-14589507 | MS.gene65297:intron | 35.0% | |
CATAAGGTAACACATTTGTG+TGG | + | chr5.2:14592163-14592182 | MS.gene65297:CDS | 35.0% | |
CCGTACAAAACAAATGATGT+GGG | - | chr5.2:14591286-14591305 | None:intergenic | 35.0% | |
GAAATGTCAATGACCTAACT+CGG | - | chr5.2:14589185-14589204 | None:intergenic | 35.0% | |
GAATAGACCATGTACAAGAA+TGG | - | chr5.2:14589613-14589632 | None:intergenic | 35.0% | |
GAGGTATATCTTTCACTAGT+TGG | - | chr5.2:14591805-14591824 | None:intergenic | 35.0% | |
GATGCTTAACCAATGTCATT+GGG | - | chr5.2:14588199-14588218 | None:intergenic | 35.0% | |
GATGTGTAGTTCACTGATAT+AGG | - | chr5.2:14591908-14591927 | None:intergenic | 35.0% | |
GATTTGCCTCTTAATTCAAC+TGG | + | chr5.2:14592913-14592932 | MS.gene65297:CDS | 35.0% | |
GGAACACTCTTCATTGTATT+TGG | - | chr5.2:14592472-14592491 | None:intergenic | 35.0% | |
GGAGTTAGAAGATGATTCAT+TGG | + | chr5.2:14588967-14588986 | MS.gene65297:intron | 35.0% | |
GTCCAGTTATTGTAAGAAAG+TGG | + | chr5.2:14592353-14592372 | MS.gene65297:CDS | 35.0% | |
GTTGACATGTTTAGATGCAA+TGG | + | chr5.2:14592043-14592062 | MS.gene65297:CDS | 35.0% | |
TAATAGTCGCGAGTGAATTA+AGG | - | chr5.2:14591982-14592001 | None:intergenic | 35.0% | |
TAATGGCGTAAATTCTGGTA+TGG | - | chr5.2:14589211-14589230 | None:intergenic | 35.0% | |
TACAAAACAAATGATGTGGG+AGG | - | chr5.2:14591283-14591302 | None:intergenic | 35.0% | |
TACACTATAGTAGATTGGTG+TGG | + | chr5.2:14589689-14589708 | MS.gene65297:intron | 35.0% | |
TATAATATATGCAAGGTCCG+GGG | + | chr5.2:14590789-14590808 | MS.gene65297:intron | 35.0% | |
TCATTAAGTGACTGCAAAAC+TGG | - | chr5.2:14587915-14587934 | None:intergenic | 35.0% | |
TGACTCAATTAATTAAGGCG+TGG | + | chr5.2:14592987-14593006 | MS.gene65297:intron | 35.0% | |
TGAGTTTGTGAGTTCATTAG+AGG | + | chr5.2:14592684-14592703 | MS.gene65297:CDS | 35.0% | |
TGTATTAGGACAATAAAGGG+TGG | - | chr5.2:14591773-14591792 | None:intergenic | 35.0% | |
! | AAGTGAGTCATGAAGCTTTT+AGG | + | chr5.2:14592566-14592585 | MS.gene65297:CDS | 35.0% |
! | ACAGCTACTTTCAAAACCAT+TGG | - | chr5.2:14592733-14592752 | None:intergenic | 35.0% |
! | AGTGAGTCATGAAGCTTTTA+GGG | + | chr5.2:14592567-14592586 | MS.gene65297:CDS | 35.0% |
! | ATGTTGTTGCATCTAGTTTG+AGG | - | chr5.2:14591640-14591659 | None:intergenic | 35.0% |
! | ATTCAAACATCTTTGAGGGA+AGG | + | chr5.2:14590588-14590607 | MS.gene65297:intron | 35.0% |
! | ATTTTCCCCATTCTTGTACA+TGG | + | chr5.2:14589603-14589622 | MS.gene65297:intron | 35.0% |
! | CCATATGATGGAAAAACCAT+AGG | + | chr5.2:14592490-14592509 | MS.gene65297:CDS | 35.0% |
! | CCTATGGTTTTTCCATCATA+TGG | - | chr5.2:14592493-14592512 | None:intergenic | 35.0% |
! | GCACACTATGAACTTCATTT+TGG | + | chr5.2:14591578-14591597 | MS.gene65297:CDS | 35.0% |
! | GCTTTAGATGAAATGAAAGC+AGG | - | chr5.2:14587313-14587332 | None:intergenic | 35.0% |
! | GGATAGAACACTAGTTTGTA+TGG | - | chr5.2:14587614-14587633 | None:intergenic | 35.0% |
! | GGTGATGGTTGAATCAAAAT+CGG | + | chr5.2:14593071-14593090 | MS.gene65297:intron | 35.0% |
! | TATCATGCAAACCACTGATT+TGG | - | chr5.2:14593234-14593253 | None:intergenic | 35.0% |
! | TCTCATAATTTGGAGTTCAG+TGG | - | chr5.2:14587807-14587826 | None:intergenic | 35.0% |
! | TGAGCAATTACATGTTGGTT+AGG | - | chr5.2:14591462-14591481 | None:intergenic | 35.0% |
! | TTAATCGGTGTCTTGTCTTT+GGG | - | chr5.2:14588119-14588138 | None:intergenic | 35.0% |
! | TTAATTAAGGCGTGGTTTGT+AGG | + | chr5.2:14592995-14593014 | MS.gene65297:intron | 35.0% |
! | TTCAAACATCTTTGAGGGAA+GGG | + | chr5.2:14590589-14590608 | MS.gene65297:intron | 35.0% |
!! | ACTTCATTTTGGTGTACCAA+TGG | + | chr5.2:14591589-14591608 | MS.gene65297:CDS | 35.0% |
!! | AGATTTTAACATAAGAGGGG+AGG | - | chr5.2:14589994-14590013 | None:intergenic | 35.0% |
!! | AGGGGTTATTGACTTTATGA+TGG | + | chr5.2:14592426-14592445 | MS.gene65297:CDS | 35.0% |
!! | ATCCTATGCTGGTGTTTTTA+TGG | + | chr5.2:14592017-14592036 | MS.gene65297:CDS | 35.0% |
!! | ATGAAGAGTGTTCCATATGA+TGG | + | chr5.2:14592478-14592497 | MS.gene65297:CDS | 35.0% |
!! | TATTTTGAATGAGAGGTGAG+AGG | - | chr5.2:14589919-14589938 | None:intergenic | 35.0% |
!! | TTTTGAAAGTAGCTGTTGTG+GGG | + | chr5.2:14592737-14592756 | MS.gene65297:CDS | 35.0% |
!!! | ATTTTTTTATTGGTGGTGGC+CGG | - | chr5.2:14590823-14590842 | None:intergenic | 35.0% |
!!! | CCCACATCATTTGTTTTGTA+CGG | + | chr5.2:14591283-14591302 | MS.gene65297:intron | 35.0% |
!!! | CCCCGGAACAATTTTTTTAT+TGG | - | chr5.2:14590833-14590852 | None:intergenic | 35.0% |
!!! | GTTTTGAAAGTAGCTGTTGT+GGG | + | chr5.2:14592736-14592755 | MS.gene65297:CDS | 35.0% |
AAGCTCCATTACTCACAGAA+AGG | - | chr5.2:14587783-14587802 | None:intergenic | 40.0% | |
ACACACTGTAGTTAGAACCT+TGG | - | chr5.2:14588675-14588694 | None:intergenic | 40.0% | |
AGCTCCATTACTCACAGAAA+GGG | - | chr5.2:14587782-14587801 | None:intergenic | 40.0% | |
AGGGTGGCTTGAAATTTCTT+TGG | - | chr5.2:14591757-14591776 | None:intergenic | 40.0% | |
ATCCTCCATTACTCACAGAA+AGG | - | chr5.2:14587833-14587852 | None:intergenic | 40.0% | |
ATGAAATGAAAGCAGGGCAA+AGG | - | chr5.2:14587306-14587325 | None:intergenic | 40.0% | |
ATTAAATCTGGGCCACACAA+AGG | - | chr5.2:14589556-14589575 | None:intergenic | 40.0% | |
ATTTGGTTAATGCCTGCTCT+TGG | + | chr5.2:14592076-14592095 | MS.gene65297:CDS | 40.0% | |
CAAAACAAATGATGTGGGAG+GGG | - | chr5.2:14591281-14591300 | None:intergenic | 40.0% | |
CAATCATGCAGTCTGCATAT+CGG | - | chr5.2:14593187-14593206 | None:intergenic | 40.0% | |
CATTACAACACACACCATTC+TGG | + | chr5.2:14589411-14589430 | MS.gene65297:intron | 40.0% | |
CATTAGGTAACCTAACACCT+AGG | - | chr5.2:14592615-14592634 | None:intergenic | 40.0% | |
CATTGTGAACTTAGCTCAGT+TGG | + | chr5.2:14590743-14590762 | MS.gene65297:intron | 40.0% | |
CTAGGTGTTAGGTTACCTAA+TGG | + | chr5.2:14592613-14592632 | MS.gene65297:CDS | 40.0% | |
GAAATAATAGCACCTGCCAT+TGG | - | chr5.2:14591608-14591627 | None:intergenic | 40.0% | |
GCAATAATTTCCAGAAGGGT+AGG | - | chr5.2:14592193-14592212 | None:intergenic | 40.0% | |
GCAATGGATGGTGTTTCATT+TGG | + | chr5.2:14592059-14592078 | MS.gene65297:CDS | 40.0% | |
GCCTCTTAATTCAACTGGTA+AGG | + | chr5.2:14592918-14592937 | MS.gene65297:intron | 40.0% | |
GGATGCTTAACCAATGTCAT+TGG | - | chr5.2:14588200-14588219 | None:intergenic | 40.0% | |
GGGTGGCTTGAAATTTCTTT+GGG | - | chr5.2:14591756-14591775 | None:intergenic | 40.0% | |
GTCCATAAAAACACCAGCAT+AGG | - | chr5.2:14592022-14592041 | None:intergenic | 40.0% | |
GTGGCTCAGATTTAATGTCA+CGG | - | chr5.2:14589462-14589481 | None:intergenic | 40.0% | |
GTTGGCCATGATCTTGTATT+AGG | - | chr5.2:14591787-14591806 | None:intergenic | 40.0% | |
GTTTGTGAGTTCATTAGAGG+TGG | + | chr5.2:14592687-14592706 | MS.gene65297:CDS | 40.0% | |
TAGTTAATAAGCTCCACAGG+AGG | + | chr5.2:14587676-14587695 | MS.gene65297:intron | 40.0% | |
TCAAGCATCTTATAGGGGAA+GGG | + | chr5.2:14590500-14590519 | MS.gene65297:intron | 40.0% | |
TCATATGGTTCCTAAGAGTG+TGG | + | chr5.2:14592882-14592901 | MS.gene65297:CDS | 40.0% | |
TCCTCCATTACTCACAGAAA+GGG | - | chr5.2:14587832-14587851 | None:intergenic | 40.0% | |
TGGGTGTATAACCAATACTC+TGG | - | chr5.2:14587991-14588010 | None:intergenic | 40.0% | |
TGTAGTCATCATAGGGAGAT+AGG | - | chr5.2:14587267-14587286 | None:intergenic | 40.0% | |
TTCAAGCATCTTATAGGGGA+AGG | + | chr5.2:14590499-14590518 | MS.gene65297:intron | 40.0% | |
TTCATGCAGTCCACATACAT+CGG | + | chr5.2:14593050-14593069 | MS.gene65297:intron | 40.0% | |
TTTCGATGTGAATCCTATGC+TGG | + | chr5.2:14592006-14592025 | MS.gene65297:CDS | 40.0% | |
TTTGTGTGGCCCAGATTTAA+TGG | + | chr5.2:14589555-14589574 | MS.gene65297:intron | 40.0% | |
! | GTTAATCGGTGTCTTGTCTT+TGG | - | chr5.2:14588120-14588139 | None:intergenic | 40.0% |
! | TAATCGGTGTCTTGTCTTTG+GGG | - | chr5.2:14588118-14588137 | None:intergenic | 40.0% |
! | TCAAACATCTTTGAGGGAAG+GGG | + | chr5.2:14590590-14590609 | MS.gene65297:intron | 40.0% |
! | TCATAGTGTGCTGGAGTATT+TGG | - | chr5.2:14591569-14591588 | None:intergenic | 40.0% |
! | TGAACTTAGCTCAGTTGGTA+TGG | + | chr5.2:14590748-14590767 | MS.gene65297:intron | 40.0% |
! | TTCAAGTTTCTCTTAGGGGT+GGG | - | chr5.2:14589962-14589981 | None:intergenic | 40.0% |
!! | AGTCATGAAGCTTTTAGGGA+TGG | + | chr5.2:14592571-14592590 | MS.gene65297:CDS | 40.0% |
!! | ATGAAGCTTTTAGGGATGGT+TGG | + | chr5.2:14592575-14592594 | MS.gene65297:CDS | 40.0% |
!! | CTTTTAGGGATGGTTGGTAT+AGG | + | chr5.2:14592581-14592600 | MS.gene65297:CDS | 40.0% |
!! | TGTCCTCAGAGTATTGGTTA+AGG | - | chr5.2:14588317-14588336 | None:intergenic | 40.0% |
!! | TTTCAAGTTTCTCTTAGGGG+TGG | - | chr5.2:14589963-14589982 | None:intergenic | 40.0% |
!!! | GGTTTTGAAAGTAGCTGTTG+TGG | + | chr5.2:14592735-14592754 | MS.gene65297:CDS | 40.0% |
!!! | GTGTGCTTCATGTTTTGACT+AGG | - | chr5.2:14591073-14591092 | None:intergenic | 40.0% |
!!! | TTTTTTTATTGGTGGTGGCC+GGG | - | chr5.2:14590822-14590841 | None:intergenic | 40.0% |
AACCAATGTCATTGGGGTAC+TGG | - | chr5.2:14588192-14588211 | None:intergenic | 45.0% | |
AACCAGTACCCCAATGACAT+TGG | + | chr5.2:14588187-14588206 | MS.gene65297:intron | 45.0% | |
AACCAGTGTCCTCAGAGTAT+TGG | - | chr5.2:14588323-14588342 | None:intergenic | 45.0% | |
AACCTTGTCACCATACACAG+TGG | - | chr5.2:14587120-14587139 | None:intergenic | 45.0% | |
AACTACACATCAGGCTCAAC+TGG | + | chr5.2:14591917-14591936 | MS.gene65297:CDS | 45.0% | |
AAGTTGACCAAGCAGAAGCA+AGG | - | chr5.2:14587205-14587224 | None:intergenic | 45.0% | |
CAAGTTCAATCATCCTCCTG+TGG | - | chr5.2:14587692-14587711 | None:intergenic | 45.0% | |
CACAACACAACACCTTTGTG+TGG | + | chr5.2:14589541-14589560 | MS.gene65297:intron | 45.0% | |
CCTAACTCGGTCTTAGAACA+AGG | - | chr5.2:14589172-14589191 | None:intergenic | 45.0% | |
CCTCCATTACTCACAGAAAG+GGG | - | chr5.2:14587831-14587850 | None:intergenic | 45.0% | |
CGTTTGAGCCATGTTAGAGT+TGG | - | chr5.2:14588897-14588916 | None:intergenic | 45.0% | |
CTTAACAAAGTGGCAGAGCT+TGG | + | chr5.2:14592289-14592308 | MS.gene65297:CDS | 45.0% | |
GAGTGACAATGTGTGTTGTG+TGG | - | chr5.2:14589481-14589500 | None:intergenic | 45.0% | |
GATCCCCTTTCTGTGAGTAA+TGG | + | chr5.2:14587775-14587794 | MS.gene65297:intron | 45.0% | |
GCTCCATTACTCACAGAAAG+GGG | - | chr5.2:14587781-14587800 | None:intergenic | 45.0% | |
GGCTCAACTGGAATTCCAAA+AGG | + | chr5.2:14591929-14591948 | MS.gene65297:CDS | 45.0% | |
TCAACCATCACCGATGTATG+TGG | - | chr5.2:14593063-14593082 | None:intergenic | 45.0% | |
TCAAGTTTCTCTTAGGGGTG+GGG | - | chr5.2:14589961-14589980 | None:intergenic | 45.0% | |
TCACCAAACACCACACTCTT+AGG | - | chr5.2:14592895-14592914 | None:intergenic | 45.0% | |
TCTAACATGGCTCAAACGTG+TGG | + | chr5.2:14588899-14588918 | MS.gene65297:intron | 45.0% | |
TGCTTCTGCTTGGTCAACTT+AGG | + | chr5.2:14587205-14587224 | MS.gene65297:intron | 45.0% | |
! | AACCAATACTCTGAGGACAC+TGG | + | chr5.2:14588318-14588337 | MS.gene65297:intron | 45.0% |
! | AAGGCGTGGTTTGTAGGATT+TGG | + | chr5.2:14593001-14593020 | MS.gene65297:intron | 45.0% |
! | GGATGGTTGGTATAGGACTA+GGG | + | chr5.2:14592588-14592607 | MS.gene65297:CDS | 45.0% |
! | GTCACCGTGCCATTAAATCT+GGG | - | chr5.2:14589567-14589586 | None:intergenic | 45.0% |
! | GTGGGGAGATATGATGATGA+TGG | + | chr5.2:14592754-14592773 | MS.gene65297:CDS | 45.0% |
! | GTTCCTAAGAGTGTGGTGTT+TGG | + | chr5.2:14592889-14592908 | MS.gene65297:CDS | 45.0% |
! | TGTCACCGTGCCATTAAATC+TGG | - | chr5.2:14589568-14589587 | None:intergenic | 45.0% |
!! | AACCTTTAGAGCACTCAACC+AGG | - | chr5.2:14587055-14587074 | None:intergenic | 45.0% |
!! | AGGAAACTGATCGGTGTCAA+AGG | - | chr5.2:14587086-14587105 | None:intergenic | 45.0% |
!! | CATTTTGGTGTACCAATGGC+AGG | + | chr5.2:14591593-14591612 | MS.gene65297:CDS | 45.0% |
!! | CCTTGTTCTAAGACCGAGTT+AGG | + | chr5.2:14589169-14589188 | MS.gene65297:intron | 45.0% |
!! | GCTCGTTCTAGGAAACTGAT+CGG | - | chr5.2:14587095-14587114 | None:intergenic | 45.0% |
!! | TGATGATGGTGACGAGTGTT+TGG | + | chr5.2:14592768-14592787 | MS.gene65297:CDS | 45.0% |
!!! | TTTTTTATTGGTGGTGGCCG+GGG | - | chr5.2:14590821-14590840 | None:intergenic | 45.0% |
!! | ATATTAAATTTCATATTATA+AGG | + | chr5.2:14588156-14588175 | MS.gene65297:intron | 5.0% |
!! | GAAATTTAATATTTATAATT+AGG | - | chr5.2:14588148-14588167 | None:intergenic | 5.0% |
!! | TTATAAAATACAATAAATTA+TGG | + | chr5.2:14590268-14590287 | MS.gene65297:intron | 5.0% |
!!! | ATGAATTTATTTTTTTTAAA+TGG | + | chr5.2:14590381-14590400 | MS.gene65297:intron | 5.0% |
!!! | TTTTTTTTTTTTTGTTTTTT+TGG | + | chr5.2:14589777-14589796 | MS.gene65297:intron | 5.0% |
AAGGTGAGTGTCACAGTTGC+TGG | + | chr5.2:14592244-14592263 | MS.gene65297:CDS | 50.0% | |
AGCCACTGTGTATGGTGACA+AGG | + | chr5.2:14587115-14587134 | MS.gene65297:CDS | 50.0% | |
ATGTTTGTGCCACCAAGAGC+AGG | - | chr5.2:14592091-14592110 | None:intergenic | 50.0% | |
CAGTCCACATACATCGGTGA+TGG | + | chr5.2:14593056-14593075 | MS.gene65297:intron | 50.0% | |
CCCCTTTCTGTGAGTAATGG+AGG | + | chr5.2:14587778-14587797 | MS.gene65297:intron | 50.0% | |
CTGCAGCAAAGCCAAATCAG+TGG | + | chr5.2:14593220-14593239 | MS.gene65297:intron | 50.0% | |
GACCTGGTTGAGTGCTCTAA+AGG | + | chr5.2:14587050-14587069 | MS.gene65297:CDS | 50.0% | |
GTCTCAACCTTGCTTCTGCT+TGG | + | chr5.2:14587195-14587214 | MS.gene65297:intron | 50.0% | |
GTGGCCCAGATTTAATGGCA+CGG | + | chr5.2:14589560-14589579 | MS.gene65297:intron | 50.0% | |
TGACTGCAAAACTGGTCGCT+TGG | - | chr5.2:14587907-14587926 | None:intergenic | 50.0% | |
TGGTATAGGACTAGGGACCT+AGG | + | chr5.2:14592595-14592614 | MS.gene65297:CDS | 50.0% | |
TGGTTAATGCCTGCTCTTGG+TGG | + | chr5.2:14592079-14592098 | MS.gene65297:CDS | 50.0% | |
! | GGGATGGTTGGTATAGGACT+AGG | + | chr5.2:14592587-14592606 | MS.gene65297:CDS | 50.0% |
!! | ACACCATTCTGGGAAGCACT+TGG | + | chr5.2:14589422-14589441 | MS.gene65297:intron | 50.0% |
!! | CACCATTCTGGGAAGCACTT+GGG | + | chr5.2:14589423-14589442 | MS.gene65297:intron | 50.0% |
ACACAGTGGCTGCTCGTTCT+AGG | - | chr5.2:14587106-14587125 | None:intergenic | 55.0% | |
CACCCAAGTGCTTCCCAGAA+TGG | - | chr5.2:14589428-14589447 | None:intergenic | 55.0% | |
GAACGAGCAGCCACTGTGTA+TGG | + | chr5.2:14587107-14587126 | MS.gene65297:CDS | 55.0% | |
GGACTAGGGACCTAGGTGTT+AGG | + | chr5.2:14592602-14592621 | MS.gene65297:CDS | 55.0% | |
TTGTTCCGGGGTTCAAACCC+CGG | + | chr5.2:14590842-14590861 | MS.gene65297:intron | 55.0% | |
!! | GTGTCTTGTCTTTGGGGCAC+TGG | - | chr5.2:14588112-14588131 | None:intergenic | 55.0% |
AAGGTCCGGGGTTCAAACCC+CGG | + | chr5.2:14590801-14590820 | MS.gene65297:intron | 60.0% | |
GTGTGGTGCACCTACCCTTC+TGG | + | chr5.2:14592180-14592199 | MS.gene65297:CDS | 60.0% | |
GGTGGCCGGGGTTTGAACCC+CGG | - | chr5.2:14590809-14590828 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 14587041 | 14593342 | 14587041 | ID=MS.gene65297 |
chr5.2 | mRNA | 14587041 | 14593342 | 14587041 | ID=MS.gene65297.t1;Parent=MS.gene65297 |
chr5.2 | exon | 14587041 | 14587160 | 14587041 | ID=MS.gene65297.t1.exon1;Parent=MS.gene65297.t1 |
chr5.2 | CDS | 14587041 | 14587160 | 14587041 | ID=cds.MS.gene65297.t1;Parent=MS.gene65297.t1 |
chr5.2 | exon | 14587227 | 14587247 | 14587227 | ID=MS.gene65297.t1.exon2;Parent=MS.gene65297.t1 |
chr5.2 | CDS | 14587227 | 14587247 | 14587227 | ID=cds.MS.gene65297.t1;Parent=MS.gene65297.t1 |
chr5.2 | exon | 14591551 | 14592934 | 14591551 | ID=MS.gene65297.t1.exon3;Parent=MS.gene65297.t1 |
chr5.2 | CDS | 14591551 | 14592934 | 14591551 | ID=cds.MS.gene65297.t1;Parent=MS.gene65297.t1 |
chr5.2 | exon | 14593335 | 14593342 | 14593335 | ID=MS.gene65297.t1.exon4;Parent=MS.gene65297.t1 |
chr5.2 | CDS | 14593335 | 14593342 | 14593335 | ID=cds.MS.gene65297.t1;Parent=MS.gene65297.t1 |
Gene Sequence |
Protein sequence |