Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64855.t1 | RHN54425.1 | 96.6 | 530 | 16 | 1 | 1 | 530 | 26 | 553 | 1.10E-299 | 1038.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64855.t1 | F4HUK6 | 44.8 | 531 | 275 | 8 | 9 | 530 | 9 | 530 | 1.7e-128 | 461.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64855.t1 | G7K007 | 96.6 | 530 | 16 | 1 | 1 | 530 | 1 | 528 | 7.8e-300 | 1038.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene05015 | MS.gene64855 | 0.818272 | 2.14E-52 | -1.69E-46 |
MS.gene050173 | MS.gene64855 | 0.859397 | 4.26E-63 | -1.69E-46 |
MS.gene051138 | MS.gene64855 | 0.820114 | 8.14E-53 | -1.69E-46 |
MS.gene051586 | MS.gene64855 | 0.832187 | 1.09E-55 | -1.69E-46 |
MS.gene053488 | MS.gene64855 | 0.815355 | 9.65E-52 | -1.69E-46 |
MS.gene053561 | MS.gene64855 | 0.83836 | 3.01E-57 | -1.69E-46 |
MS.gene054056 | MS.gene64855 | 0.846942 | 1.58E-59 | -1.69E-46 |
MS.gene055942 | MS.gene64855 | 0.846069 | 2.74E-59 | -1.69E-46 |
MS.gene058628 | MS.gene64855 | 0.818116 | 2.32E-52 | -1.69E-46 |
MS.gene058629 | MS.gene64855 | 0.814033 | 1.89E-51 | -1.69E-46 |
MS.gene059428 | MS.gene64855 | 0.841385 | 4.91E-58 | -1.69E-46 |
MS.gene059690 | MS.gene64855 | 0.849419 | 3.27E-60 | -1.69E-46 |
MS.gene059691 | MS.gene64855 | 0.816762 | 4.68E-52 | -1.69E-46 |
MS.gene059694 | MS.gene64855 | 0.839694 | 1.36E-57 | -1.69E-46 |
MS.gene059697 | MS.gene64855 | 0.828226 | 1.01E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64855.t1 | MTR_5g023730 | 96.604 | 530 | 16 | 1 | 1 | 530 | 1 | 528 | 0.0 | 1050 |
MS.gene64855.t1 | MTR_5g008800 | 48.030 | 533 | 262 | 9 | 3 | 530 | 2 | 524 | 6.15e-173 | 499 |
MS.gene64855.t1 | MTR_5g008820 | 46.692 | 529 | 267 | 8 | 6 | 530 | 5 | 522 | 8.52e-169 | 489 |
MS.gene64855.t1 | MTR_8g074040 | 47.103 | 535 | 266 | 9 | 3 | 530 | 44 | 568 | 1.15e-165 | 483 |
MS.gene64855.t1 | MTR_4g121600 | 41.941 | 546 | 292 | 10 | 3 | 530 | 5 | 543 | 2.34e-143 | 425 |
MS.gene64855.t1 | MTR_2g044180 | 40.693 | 548 | 300 | 10 | 1 | 530 | 3 | 543 | 1.47e-140 | 417 |
MS.gene64855.t1 | MTR_8g074120 | 46.996 | 466 | 236 | 6 | 70 | 530 | 20 | 479 | 3.31e-140 | 415 |
MS.gene64855.t1 | MTR_5g076240 | 40.556 | 540 | 299 | 11 | 4 | 530 | 2 | 532 | 1.10e-136 | 407 |
MS.gene64855.t1 | MTR_8g074040 | 45.733 | 457 | 233 | 7 | 81 | 530 | 2 | 450 | 1.01e-133 | 397 |
MS.gene64855.t1 | MTR_3g064420 | 40.481 | 541 | 295 | 11 | 4 | 526 | 3 | 534 | 1.98e-133 | 400 |
MS.gene64855.t1 | MTR_5g076220 | 42.884 | 541 | 286 | 12 | 4 | 530 | 2 | 533 | 1.77e-129 | 389 |
MS.gene64855.t1 | MTR_0161s0050 | 42.751 | 538 | 283 | 11 | 9 | 530 | 7 | 535 | 4.49e-125 | 378 |
MS.gene64855.t1 | MTR_5g076200 | 42.533 | 529 | 281 | 12 | 16 | 530 | 14 | 533 | 6.23e-125 | 377 |
MS.gene64855.t1 | MTR_2g044180 | 39.520 | 458 | 255 | 8 | 89 | 530 | 1 | 452 | 1.15e-110 | 338 |
MS.gene64855.t1 | MTR_0803s0020 | 26.782 | 519 | 347 | 13 | 16 | 527 | 235 | 727 | 8.67e-43 | 164 |
MS.gene64855.t1 | MTR_5g007640 | 25.926 | 540 | 331 | 20 | 12 | 519 | 67 | 569 | 1.36e-32 | 132 |
MS.gene64855.t1 | MTR_3g460770 | 25.862 | 522 | 327 | 19 | 8 | 506 | 16 | 500 | 2.55e-30 | 125 |
MS.gene64855.t1 | MTR_8g039720 | 26.113 | 494 | 309 | 18 | 43 | 511 | 65 | 527 | 4.85e-30 | 124 |
MS.gene64855.t1 | MTR_1g026310 | 23.214 | 504 | 346 | 12 | 42 | 530 | 67 | 544 | 2.11e-29 | 122 |
MS.gene64855.t1 | MTR_4g077900 | 25.873 | 487 | 312 | 15 | 55 | 524 | 1 | 455 | 2.80e-29 | 121 |
MS.gene64855.t1 | MTR_2g095510 | 25.388 | 516 | 348 | 16 | 16 | 522 | 27 | 514 | 3.34e-27 | 115 |
MS.gene64855.t1 | MTR_4g057730 | 24.858 | 527 | 340 | 17 | 16 | 522 | 27 | 517 | 4.24e-27 | 115 |
MS.gene64855.t1 | MTR_4g005750 | 25.641 | 546 | 339 | 20 | 1 | 522 | 6 | 508 | 3.85e-26 | 112 |
MS.gene64855.t1 | MTR_1586s0010 | 24.365 | 394 | 275 | 10 | 15 | 396 | 39 | 421 | 5.92e-26 | 110 |
MS.gene64855.t1 | MTR_2g105570 | 25.605 | 496 | 319 | 19 | 43 | 522 | 54 | 515 | 1.03e-25 | 111 |
MS.gene64855.t1 | MTR_5g027500 | 25.595 | 504 | 317 | 18 | 54 | 530 | 80 | 552 | 3.63e-25 | 109 |
MS.gene64855.t1 | MTR_1g063110 | 24.138 | 522 | 355 | 15 | 16 | 522 | 28 | 523 | 1.45e-24 | 107 |
MS.gene64855.t1 | MTR_4g057730 | 24.580 | 476 | 307 | 16 | 16 | 471 | 27 | 470 | 1.99e-23 | 103 |
MS.gene64855.t1 | MTR_5g027480 | 26.600 | 500 | 292 | 24 | 54 | 524 | 79 | 532 | 3.92e-23 | 103 |
MS.gene64855.t1 | MTR_4g128337 | 23.563 | 522 | 339 | 17 | 12 | 511 | 29 | 512 | 4.61e-23 | 103 |
MS.gene64855.t1 | MTR_1g063120 | 24.060 | 532 | 347 | 19 | 16 | 522 | 28 | 527 | 1.50e-22 | 101 |
MS.gene64855.t1 | MTR_1569s0010 | 27.954 | 347 | 226 | 9 | 193 | 530 | 188 | 519 | 6.97e-22 | 99.4 |
MS.gene64855.t1 | MTR_1g090737 | 24.655 | 507 | 320 | 18 | 38 | 524 | 79 | 543 | 3.19e-21 | 97.8 |
MS.gene64855.t1 | MTR_4g057730 | 24.183 | 459 | 296 | 16 | 16 | 454 | 27 | 453 | 1.01e-19 | 92.4 |
MS.gene64855.t1 | MTR_3g035130 | 21.805 | 532 | 352 | 14 | 21 | 530 | 10 | 499 | 1.17e-18 | 89.4 |
MS.gene64855.t1 | MTR_2g030240 | 23.768 | 568 | 332 | 20 | 22 | 532 | 8 | 531 | 2.38e-18 | 88.6 |
MS.gene64855.t1 | MTR_4g068670 | 22.131 | 488 | 303 | 17 | 44 | 472 | 79 | 548 | 9.23e-18 | 87.0 |
MS.gene64855.t1 | MTR_3g088880 | 23.446 | 354 | 235 | 11 | 184 | 522 | 199 | 531 | 1.72e-17 | 85.9 |
MS.gene64855.t1 | MTR_8g099420 | 23.679 | 511 | 296 | 21 | 32 | 472 | 66 | 552 | 1.94e-15 | 79.7 |
MS.gene64855.t1 | MTR_3g088870 | 22.689 | 357 | 237 | 11 | 184 | 522 | 198 | 533 | 2.15e-15 | 79.3 |
MS.gene64855.t1 | MTR_1g073180 | 25.575 | 391 | 253 | 13 | 153 | 530 | 153 | 518 | 3.72e-15 | 78.6 |
MS.gene64855.t1 | MTR_1054s0020 | 23.673 | 490 | 312 | 18 | 9 | 480 | 261 | 706 | 6.91e-15 | 78.2 |
MS.gene64855.t1 | MTR_5g009360 | 22.880 | 507 | 299 | 19 | 35 | 472 | 68 | 551 | 1.17e-14 | 77.4 |
MS.gene64855.t1 | MTR_5g009360 | 24.740 | 384 | 208 | 15 | 151 | 472 | 61 | 425 | 3.37e-14 | 75.5 |
MS.gene64855.t1 | MTR_1g026430 | 23.948 | 309 | 210 | 8 | 42 | 337 | 67 | 363 | 3.59e-14 | 75.1 |
MS.gene64855.t1 | MTR_1g026470 | 24.272 | 309 | 209 | 8 | 42 | 337 | 67 | 363 | 3.66e-14 | 74.7 |
MS.gene64855.t1 | MTR_5g009350 | 24.266 | 511 | 287 | 22 | 35 | 472 | 68 | 551 | 5.96e-14 | 75.1 |
MS.gene64855.t1 | MTR_5g009350 | 24.266 | 511 | 287 | 22 | 35 | 472 | 68 | 551 | 7.22e-14 | 74.7 |
MS.gene64855.t1 | MTR_1g086600 | 33.793 | 145 | 86 | 4 | 329 | 472 | 438 | 573 | 9.89e-14 | 74.3 |
MS.gene64855.t1 | MTR_7g109830 | 27.551 | 196 | 130 | 4 | 280 | 472 | 363 | 549 | 1.19e-13 | 73.9 |
MS.gene64855.t1 | MTR_1g073180 | 25.131 | 382 | 249 | 12 | 153 | 522 | 175 | 531 | 1.49e-13 | 73.6 |
MS.gene64855.t1 | MTR_5g009350 | 24.366 | 513 | 280 | 23 | 35 | 470 | 68 | 549 | 2.05e-13 | 73.2 |
MS.gene64855.t1 | MTR_5g009350 | 24.409 | 508 | 276 | 23 | 35 | 465 | 68 | 544 | 3.98e-13 | 72.4 |
MS.gene64855.t1 | MTR_2g030240 | 24.250 | 400 | 238 | 14 | 181 | 532 | 55 | 437 | 1.88e-12 | 69.7 |
MS.gene64855.t1 | MTR_1g034360 | 28.481 | 158 | 91 | 6 | 322 | 472 | 408 | 550 | 1.80e-11 | 67.0 |
MS.gene64855.t1 | MTR_7g084850 | 25.485 | 361 | 221 | 13 | 187 | 520 | 358 | 697 | 3.09e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64855.t1 | AT1G20560 | 46.328 | 531 | 267 | 8 | 9 | 530 | 9 | 530 | 2.74e-168 | 488 |
MS.gene64855.t1 | AT2G17650 | 46.542 | 535 | 258 | 10 | 15 | 530 | 60 | 585 | 3.30e-156 | 459 |
MS.gene64855.t1 | AT5G16340 | 41.296 | 540 | 293 | 10 | 3 | 530 | 2 | 529 | 5.18e-138 | 410 |
MS.gene64855.t1 | AT1G76290 | 42.243 | 535 | 288 | 10 | 3 | 530 | 2 | 522 | 1.95e-137 | 409 |
MS.gene64855.t1 | AT3G16910 | 41.011 | 534 | 287 | 10 | 16 | 530 | 22 | 546 | 2.06e-136 | 407 |
MS.gene64855.t1 | AT1G66120 | 41.929 | 539 | 291 | 13 | 4 | 529 | 3 | 532 | 3.34e-136 | 407 |
MS.gene64855.t1 | AT5G16370 | 40.741 | 540 | 296 | 10 | 3 | 530 | 2 | 529 | 5.92e-135 | 403 |
MS.gene64855.t1 | AT1G20560 | 44.760 | 458 | 236 | 7 | 82 | 530 | 3 | 452 | 9.46e-135 | 399 |
MS.gene64855.t1 | AT1G75960 | 41.495 | 535 | 288 | 10 | 9 | 530 | 7 | 529 | 2.29e-132 | 396 |
MS.gene64855.t1 | AT1G65890 | 38.419 | 544 | 309 | 9 | 4 | 528 | 2 | 538 | 9.47e-129 | 388 |
MS.gene64855.t1 | AT1G65880 | 39.051 | 548 | 300 | 11 | 4 | 528 | 3 | 539 | 3.37e-128 | 386 |
MS.gene64855.t1 | AT1G21530 | 39.509 | 529 | 299 | 11 | 15 | 530 | 13 | 533 | 8.06e-127 | 382 |
MS.gene64855.t1 | AT1G21540 | 40.076 | 529 | 297 | 11 | 15 | 530 | 13 | 534 | 1.02e-126 | 382 |
MS.gene64855.t1 | AT1G21530 | 39.509 | 529 | 297 | 12 | 15 | 530 | 13 | 531 | 1.42e-124 | 376 |
MS.gene64855.t1 | AT1G77240 | 38.710 | 527 | 302 | 12 | 15 | 530 | 13 | 529 | 2.29e-121 | 367 |
MS.gene64855.t1 | AT1G68270 | 35.229 | 545 | 295 | 12 | 4 | 528 | 2 | 508 | 1.61e-103 | 321 |
MS.gene64855.t1 | AT3G21240 | 25.651 | 499 | 323 | 17 | 43 | 524 | 64 | 531 | 1.10e-28 | 120 |
MS.gene64855.t1 | AT1G65060 | 25.731 | 513 | 338 | 16 | 12 | 511 | 46 | 528 | 1.19e-27 | 117 |
MS.gene64855.t1 | AT3G21240 | 26.174 | 447 | 286 | 16 | 43 | 472 | 64 | 483 | 1.09e-26 | 113 |
MS.gene64855.t1 | AT3G21240 | 26.174 | 447 | 286 | 16 | 43 | 472 | 64 | 483 | 1.09e-26 | 113 |
MS.gene64855.t1 | AT5G63380 | 28.161 | 348 | 225 | 12 | 184 | 522 | 202 | 533 | 2.92e-26 | 113 |
MS.gene64855.t1 | AT4G05160 | 25.806 | 527 | 331 | 18 | 19 | 522 | 30 | 519 | 1.19e-25 | 111 |
MS.gene64855.t1 | AT1G20510 | 25.512 | 537 | 354 | 19 | 9 | 528 | 19 | 526 | 1.24e-25 | 110 |
MS.gene64855.t1 | AT1G51680 | 26.025 | 488 | 318 | 17 | 43 | 513 | 66 | 527 | 1.13e-24 | 108 |
MS.gene64855.t1 | AT1G51680 | 26.380 | 489 | 316 | 18 | 40 | 511 | 64 | 525 | 1.54e-24 | 107 |
MS.gene64855.t1 | AT1G20480 | 24.954 | 549 | 350 | 20 | 9 | 530 | 36 | 549 | 6.16e-24 | 105 |
MS.gene64855.t1 | AT1G20500 | 26.514 | 479 | 297 | 18 | 62 | 522 | 84 | 525 | 6.55e-24 | 105 |
MS.gene64855.t1 | AT1G51680 | 26.667 | 450 | 290 | 16 | 40 | 472 | 64 | 490 | 3.17e-23 | 103 |
MS.gene64855.t1 | AT1G20510 | 25.470 | 479 | 316 | 16 | 9 | 471 | 19 | 472 | 1.29e-22 | 101 |
MS.gene64855.t1 | AT5G38120 | 25.192 | 520 | 331 | 17 | 25 | 524 | 46 | 527 | 2.10e-22 | 101 |
MS.gene64855.t1 | AT4G19010 | 23.541 | 497 | 309 | 19 | 62 | 530 | 93 | 546 | 3.19e-22 | 100 |
MS.gene64855.t1 | AT1G62940 | 23.425 | 508 | 329 | 14 | 34 | 524 | 53 | 517 | 7.78e-22 | 99.4 |
MS.gene64855.t1 | AT5G38120 | 25.247 | 507 | 321 | 17 | 25 | 511 | 46 | 514 | 1.47e-21 | 98.6 |
MS.gene64855.t1 | AT3G21230 | 25.373 | 536 | 343 | 18 | 12 | 522 | 40 | 543 | 1.85e-21 | 98.6 |
MS.gene64855.t1 | AT3G21230 | 25.333 | 525 | 335 | 18 | 12 | 511 | 40 | 532 | 3.53e-21 | 97.4 |
MS.gene64855.t1 | AT5G38120 | 25.696 | 467 | 293 | 16 | 25 | 471 | 46 | 478 | 9.69e-21 | 95.5 |
MS.gene64855.t1 | AT5G38120 | 25.696 | 467 | 293 | 16 | 25 | 471 | 46 | 478 | 9.69e-21 | 95.5 |
MS.gene64855.t1 | AT2G47240 | 24.330 | 485 | 298 | 14 | 44 | 472 | 19 | 490 | 1.65e-20 | 95.5 |
MS.gene64855.t1 | AT2G47240 | 24.330 | 485 | 298 | 14 | 44 | 472 | 78 | 549 | 2.68e-20 | 95.1 |
MS.gene64855.t1 | AT2G47240 | 24.330 | 485 | 298 | 14 | 44 | 472 | 78 | 549 | 2.68e-20 | 95.1 |
MS.gene64855.t1 | AT2G47240 | 24.330 | 485 | 298 | 14 | 44 | 472 | 78 | 549 | 2.68e-20 | 95.1 |
MS.gene64855.t1 | AT1G30520 | 24.303 | 502 | 323 | 15 | 22 | 494 | 13 | 486 | 2.10e-19 | 92.0 |
MS.gene64855.t1 | AT1G30520 | 24.303 | 502 | 323 | 15 | 22 | 494 | 13 | 486 | 2.10e-19 | 92.0 |
MS.gene64855.t1 | AT3G48990 | 24.214 | 541 | 315 | 18 | 21 | 524 | 9 | 491 | 1.87e-18 | 89.0 |
MS.gene64855.t1 | AT3G21230 | 25.514 | 486 | 309 | 17 | 12 | 472 | 40 | 497 | 2.61e-18 | 88.2 |
MS.gene64855.t1 | AT1G20510 | 24.524 | 473 | 309 | 18 | 9 | 458 | 19 | 466 | 7.84e-17 | 83.6 |
MS.gene64855.t1 | AT4G11030 | 22.863 | 503 | 291 | 21 | 40 | 472 | 77 | 552 | 9.15e-13 | 71.2 |
Find 95 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAACACTCTTCATTGTATT+TGG | 0.117189 | 5.3:-13643581 | None:intergenic |
CTGAATTATGTTGATCAAAA+AGG | 0.196037 | 5.3:+13643518 | MS.gene64855:CDS |
AAAAGATATTATTTATTCTA+AGG | 0.210086 | 5.3:+13643772 | MS.gene64855:CDS |
TTCCACTTTCTTACAATAAC+TGG | 0.223827 | 5.3:-13643467 | None:intergenic |
GCACACTATGAACTTCATTT+TGG | 0.224185 | 5.3:+13642690 | MS.gene64855:CDS |
TGATTATAAACTGCTCCTTT+TGG | 0.243384 | 5.3:-13643056 | None:intergenic |
AAGAAGTTCATCGTATATTA+AGG | 0.246952 | 5.3:-13642943 | None:intergenic |
TTGCAAACTGTGACATTATT+AGG | 0.258350 | 5.3:+13643321 | MS.gene64855:CDS |
TCATAGTGTGCTGGAGTATT+TGG | 0.268936 | 5.3:-13642678 | None:intergenic |
ATAGGTGAAATCATGTTTAA+AGG | 0.270805 | 5.3:+13643620 | MS.gene64855:CDS |
AGGGTGGCTTGAAATTTCTT+TGG | 0.272452 | 5.3:-13642866 | None:intergenic |
CTTGGATTTGATGTTAATAT+TGG | 0.274603 | 5.3:+13643419 | MS.gene64855:CDS |
ATAGGATCACATTCATTTCT+AGG | 0.276426 | 5.3:-13642999 | None:intergenic |
GTTGGCCATGATCTTGTATT+AGG | 0.280602 | 5.3:-13642896 | None:intergenic |
ACACAGTGGCTGCTCGTTCT+AGG | 0.291086 | 5.3:-13638199 | None:intergenic |
TCACCAAACACCACACTCTT+AGG | 0.297868 | 5.3:-13644004 | None:intergenic |
TAATAGTCGCGAGTGAATTA+AGG | 0.299417 | 5.3:-13643091 | None:intergenic |
GTGTGGTGCACCTACCCTTC+TGG | 0.311889 | 5.3:+13643292 | MS.gene64855:CDS |
TCTCAACCTTGCTTCTGCTT+TGG | 0.326179 | 5.3:+13638292 | MS.gene64855:CDS |
AACTACACATCAGGCTCAAC+TGG | 0.349825 | 5.3:+13643029 | MS.gene64855:CDS |
AACAACATTAGCATTAATAT+TGG | 0.350853 | 5.3:+13642764 | MS.gene64855:CDS |
GGGTGGCTTGAAATTTCTTT+GGG | 0.360504 | 5.3:-13642865 | None:intergenic |
TGAGTTTGTGAGTTCATTAG+AGG | 0.375347 | 5.3:+13643796 | MS.gene64855:CDS |
GAGGTATATCTTTCACTAGT+TGG | 0.380173 | 5.3:-13642914 | None:intergenic |
TAGGTGAAATCATGTTTAAA+GGG | 0.386467 | 5.3:+13643621 | MS.gene64855:CDS |
TGAAGCAATTCATGTTCATA+AGG | 0.387735 | 5.3:+13643259 | MS.gene64855:CDS |
TTTGATGTTAATATTGGTTA+TGG | 0.391504 | 5.3:+13643425 | MS.gene64855:CDS |
TTATAAACAGGTTGCAACTT+TGG | 0.394543 | 5.3:+13642653 | MS.gene64855:intron |
AAAGGGAATACTTCAATGTC+AGG | 0.397558 | 5.3:+13643638 | MS.gene64855:CDS |
ACCTTACCAGTTGAATTAAG+AGG | 0.398367 | 5.3:-13644031 | None:intergenic |
TTTAAACATGATTTCACCTA+TGG | 0.398368 | 5.3:-13643618 | None:intergenic |
AAGGTGAGTGTCACAGTTGC+TGG | 0.399927 | 5.3:+13643356 | MS.gene64855:CDS |
ATGTTGTTGCATCTAGTTTG+AGG | 0.405861 | 5.3:-13642749 | None:intergenic |
GTCAACTTAGGAATTTCTAA+TGG | 0.406509 | 5.3:+13638314 | MS.gene64855:CDS |
ATACGATGAACTTCTTGAAA+AGG | 0.413737 | 5.3:+13642950 | MS.gene64855:CDS |
TTCAAATTGAAAGAACCATT+AGG | 0.416142 | 5.3:-13643740 | None:intergenic |
GATTTGCCTCTTAATTCAAC+TGG | 0.421617 | 5.3:+13644025 | MS.gene64855:CDS |
ATTTGGTTAATGCCTGCTCT+TGG | 0.425029 | 5.3:+13643188 | MS.gene64855:CDS |
ATCTTGTATTAGGACAATAA+AGG | 0.426401 | 5.3:-13642886 | None:intergenic |
GCAATGGATGGTGTTTCATT+TGG | 0.447289 | 5.3:+13643171 | MS.gene64855:CDS |
TGATGATGGTGACGAGTGTT+TGG | 0.449095 | 5.3:+13643880 | MS.gene64855:CDS |
GAACGAGCAGCCACTGTGTA+TGG | 0.449210 | 5.3:+13638203 | MS.gene64855:CDS |
ATGAAGAGTGTTCCATATGA+TGG | 0.450784 | 5.3:+13643590 | MS.gene64855:CDS |
CTTAACAAAGTGGCAGAGCT+TGG | 0.451298 | 5.3:+13643401 | MS.gene64855:CDS |
AACATGATCATTGTAGATGA+TGG | 0.453182 | 5.3:-13638237 | None:intergenic |
GCTTCTGCTTTGGTCAACTT+AGG | 0.458586 | 5.3:+13638302 | MS.gene64855:CDS |
TGGTTAATGCCTGCTCTTGG+TGG | 0.459143 | 5.3:+13643191 | MS.gene64855:CDS |
CTAGGTGTTAGGTTACCTAA+TGG | 0.459759 | 5.3:+13643725 | MS.gene64855:CDS |
TATGGTATGACTGAAACATT+AGG | 0.461838 | 5.3:+13643443 | MS.gene64855:CDS |
GGACTAGGGACCTAGGTGTT+AGG | 0.465511 | 5.3:+13643714 | MS.gene64855:CDS |
GTTCCTAAGAGTGTGGTGTT+TGG | 0.467445 | 5.3:+13644001 | MS.gene64855:CDS |
GTCCAGTTATTGTAAGAAAG+TGG | 0.471102 | 5.3:+13643465 | MS.gene64855:CDS |
TACGATGAACTTCTTGAAAA+GGG | 0.473555 | 5.3:+13642951 | MS.gene64855:CDS |
AGATCAATTAGATGCTCATA+TGG | 0.476810 | 5.3:+13643979 | MS.gene64855:CDS |
AAGGTTGAGACATCTTTCAT+AGG | 0.478199 | 5.3:-13638279 | None:intergenic |
AAAGATATTATTTATTCTAA+GGG | 0.478681 | 5.3:+13643773 | MS.gene64855:CDS |
AGGGGTTATTGACTTTATGA+TGG | 0.478800 | 5.3:+13643538 | MS.gene64855:CDS |
GGGATGGTTGGTATAGGACT+AGG | 0.479682 | 5.3:+13643699 | MS.gene64855:CDS |
ACAGCTACTTTCAAAACCAT+TGG | 0.487308 | 5.3:-13643842 | None:intergenic |
ATTGTCCTAATACAAGATCA+TGG | 0.490140 | 5.3:+13642891 | MS.gene64855:CDS |
TCTTGTATTAGGACAATAAA+GGG | 0.497609 | 5.3:-13642885 | None:intergenic |
GTTTGTGAGTTCATTAGAGG+TGG | 0.501370 | 5.3:+13643799 | MS.gene64855:CDS |
GATGTGTAGTTCACTGATAT+AGG | 0.502126 | 5.3:-13643017 | None:intergenic |
GACCTGGTTGAGTGCTCTAA+AGG | 0.506891 | 5.3:+13638146 | MS.gene64855:CDS |
GCAATAATTTCCAGAAGGGT+AGG | 0.508940 | 5.3:-13643302 | None:intergenic |
GGCTCAACTGGAATTCCAAA+AGG | 0.522211 | 5.3:+13643041 | MS.gene64855:CDS |
GCAATTGTGAAATTGAAAGA+TGG | 0.524748 | 5.3:+13643917 | MS.gene64855:CDS |
GTTGACATGTTTAGATGCAA+TGG | 0.528978 | 5.3:+13643155 | MS.gene64855:CDS |
ATATCAGTGAACTACACATC+AGG | 0.529465 | 5.3:+13643020 | MS.gene64855:CDS |
TTTCGATGTGAATCCTATGC+TGG | 0.531354 | 5.3:+13643118 | MS.gene64855:CDS |
ATGTTTGTGCCACCAAGAGC+AGG | 0.540220 | 5.3:-13643200 | None:intergenic |
ATTCAAAATTCTTAACAAAG+TGG | 0.541410 | 5.3:+13643391 | MS.gene64855:CDS |
GAAATAATAGCACCTGCCAT+TGG | 0.541429 | 5.3:-13642717 | None:intergenic |
CTCAACCAGGTCTTGTGTCA+TGG | 0.545213 | 5.3:-13638135 | None:intergenic |
AAATGAAGTTCATAGTGTGC+TGG | 0.549199 | 5.3:-13642687 | None:intergenic |
AGGAAACTGATCGGTGTCAA+AGG | 0.571406 | 5.3:-13638179 | None:intergenic |
GTTTGCAATAATTTCCAGAA+GGG | 0.591302 | 5.3:-13643306 | None:intergenic |
AACCTTTAGAGCACTCAACC+AGG | 0.592689 | 5.3:-13638148 | None:intergenic |
CGTTACCATGACACAAGACC+TGG | 0.596346 | 5.3:+13638130 | None:intergenic |
TTCAATTTCACAATTGCACA+AGG | 0.596592 | 5.3:-13643911 | None:intergenic |
TCGTATATTAAGGTATCTTG+AGG | 0.597008 | 5.3:-13642933 | None:intergenic |
AAGGGAATACTTCAATGTCA+GGG | 0.598415 | 5.3:+13643639 | MS.gene64855:CDS |
AGTTTGCAATAATTTCCAGA+AGG | 0.600004 | 5.3:-13643307 | None:intergenic |
TGGTATAGGACTAGGGACCT+AGG | 0.607960 | 5.3:+13643707 | MS.gene64855:CDS |
CATTAGGTAACCTAACACCT+AGG | 0.611239 | 5.3:-13643724 | None:intergenic |
AGCCACTGTGTATGGTGACA+AGG | 0.623725 | 5.3:+13638211 | MS.gene64855:CDS |
GTGGGGAGATATGATGATGA+TGG | 0.634328 | 5.3:+13643866 | MS.gene64855:CDS |
AGTTGACCAAAGCAGAAGCA+AGG | 0.644972 | 5.3:-13638298 | None:intergenic |
GGATGGTTGGTATAGGACTA+GGG | 0.648496 | 5.3:+13643700 | MS.gene64855:CDS |
GCTCGTTCTAGGAAACTGAT+CGG | 0.653949 | 5.3:-13638188 | None:intergenic |
ACATGTTTAGATGCAATGGA+TGG | 0.657007 | 5.3:+13643159 | MS.gene64855:CDS |
TGTATTAGGACAATAAAGGG+TGG | 0.682560 | 5.3:-13642882 | None:intergenic |
CATAAGGTAACACATTTGTG+TGG | 0.685677 | 5.3:+13643275 | MS.gene64855:CDS |
TCATATGGTTCCTAAGAGTG+TGG | 0.716052 | 5.3:+13643994 | MS.gene64855:CDS |
AACCTTGTCACCATACACAG+TGG | 0.766651 | 5.3:-13638213 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTTAATATTTATAATTA+GGG | - | chr5.3:13639248-13639267 | None:intergenic | 0.0% |
!! | AAAAGATATTATTTATTCTA+AGG | + | chr5.3:13643772-13643791 | MS.gene64855:CDS | 10.0% |
!! | AAAGATATTATTTATTCTAA+GGG | + | chr5.3:13643773-13643792 | MS.gene64855:CDS | 10.0% |
!! | AGAAGAATATTTAAATTATA+AGG | + | chr5.3:13642440-13642459 | MS.gene64855:intron | 10.0% |
!! | TAAACAAATTAAAAAACTAA+GGG | + | chr5.3:13640842-13640861 | MS.gene64855:intron | 10.0% |
!! | TAATCAAAACATAAATTAAA+AGG | - | chr5.3:13642508-13642527 | None:intergenic | 10.0% |
!! | TATAATATATAATATATGCA+AGG | + | chr5.3:13641894-13641913 | MS.gene64855:intron | 10.0% |
!! | TTATATCGTTAAAAATAAAA+AGG | + | chr5.3:13639593-13639612 | MS.gene64855:intron | 10.0% |
!!! | AATTTATTTTTTTTAAATGG+TGG | + | chr5.3:13641496-13641515 | MS.gene64855:intron | 10.0% |
!!! | ATATGTTGTTATTTTTTTAT+TGG | - | chr5.3:13641986-13642005 | None:intergenic | 10.0% |
!!! | TTTTACATTTTTAATATGAA+CGG | - | chr5.3:13639642-13639661 | None:intergenic | 10.0% |
!! | AAAAAAACACGTTATTAAAA+TGG | + | chr5.3:13640369-13640388 | MS.gene64855:intron | 15.0% |
!! | AAAATAATAATAAATCTGTG+TGG | - | chr5.3:13640455-13640474 | None:intergenic | 15.0% |
!! | AAAATATTAAGCTAGATATA+TGG | - | chr5.3:13644214-13644233 | None:intergenic | 15.0% |
!! | AAATATTAAGCTAGATATAT+GGG | - | chr5.3:13644213-13644232 | None:intergenic | 15.0% |
!! | AATATAGAATTCAAAATACA+AGG | + | chr5.3:13642114-13642133 | MS.gene64855:intron | 15.0% |
!! | AGTGCATATTTAATTATTAA+GGG | + | chr5.3:13641576-13641595 | MS.gene64855:intron | 15.0% |
!! | GAATATTTAAATTATAAGGT+TGG | + | chr5.3:13642444-13642463 | MS.gene64855:intron | 15.0% |
!! | GTAAACAAATTAAAAAACTA+AGG | + | chr5.3:13640841-13640860 | MS.gene64855:intron | 15.0% |
!! | TAAAAAGAAAGAAAGTTTAT+CGG | - | chr5.3:13639523-13639542 | None:intergenic | 15.0% |
!! | TAATAAAAACTTACTTCTTT+GGG | - | chr5.3:13639110-13639129 | None:intergenic | 15.0% |
!! | TAATATAAGAAAGAAAATTG+AGG | - | chr5.3:13642636-13642655 | None:intergenic | 15.0% |
!! | TAATTAGATTAGAGATTAAA+TGG | - | chr5.3:13644273-13644292 | None:intergenic | 15.0% |
!! | TAGTGCATATTTAATTATTA+AGG | + | chr5.3:13641575-13641594 | MS.gene64855:intron | 15.0% |
!! | TTAATAAAAACTTACTTCTT+TGG | - | chr5.3:13639111-13639130 | None:intergenic | 15.0% |
!! | TTACATTGATACATTATATT+TGG | - | chr5.3:13638460-13638479 | None:intergenic | 15.0% |
!! | TTCTTTCTTATATTATAAAC+AGG | + | chr5.3:13642641-13642660 | MS.gene64855:intron | 15.0% |
!!! | AAATGTTTTTGTCTAAATTT+TGG | + | chr5.3:13638560-13638579 | MS.gene64855:intron | 15.0% |
!!! | AACTTTTGTAAATAATCAAA+TGG | - | chr5.3:13642285-13642304 | None:intergenic | 15.0% |
!!! | AATAACATGTTTTTTCTTAA+TGG | - | chr5.3:13640338-13640357 | None:intergenic | 15.0% |
!!! | ACGATATAATTTTACAAATT+TGG | - | chr5.3:13639877-13639896 | None:intergenic | 15.0% |
!!! | AGAGAAAATATTAAAAGTAT+TGG | + | chr5.3:13644070-13644089 | MS.gene64855:intron | 15.0% |
!!! | AGTAAGTTTTTATTAAAAAG+TGG | + | chr5.3:13639115-13639134 | MS.gene64855:intron | 15.0% |
!!! | AGTATAAATTTTTCTTTTCA+AGG | + | chr5.3:13641635-13641654 | MS.gene64855:intron | 15.0% |
!!! | AGTGTATATTTTAACAAAAA+AGG | - | chr5.3:13641008-13641027 | None:intergenic | 15.0% |
!!! | ATATTTTAACAAAAAAGGAA+AGG | - | chr5.3:13641003-13641022 | None:intergenic | 15.0% |
!!! | CTTGTTTCATATTTTTTATT+AGG | - | chr5.3:13641332-13641351 | None:intergenic | 15.0% |
!!! | GAGAAAATATTAAAAGTATT+GGG | + | chr5.3:13644071-13644090 | MS.gene64855:intron | 15.0% |
!!! | TAATAACGTGTTTTTTTTAA+GGG | - | chr5.3:13640366-13640385 | None:intergenic | 15.0% |
!!! | TATAGGAAAAAAATTCTTTT+CGG | - | chr5.3:13642603-13642622 | None:intergenic | 15.0% |
!!! | TGATTTAAAACATTCAAAAA+AGG | + | chr5.3:13639742-13639761 | MS.gene64855:intron | 15.0% |
!!! | TTAATAACGTGTTTTTTTTA+AGG | - | chr5.3:13640367-13640386 | None:intergenic | 15.0% |
!! | AAAAATAATCTAACACACTT+CGG | + | chr5.3:13641173-13641192 | MS.gene64855:intron | 20.0% |
!! | AAAATTATATCGTTACGAAA+AGG | + | chr5.3:13639884-13639903 | MS.gene64855:intron | 20.0% |
!! | AACAACATTAGCATTAATAT+TGG | + | chr5.3:13642764-13642783 | MS.gene64855:CDS | 20.0% |
!! | AATTAACTGGTTATTCTAAT+TGG | + | chr5.3:13638686-13638705 | MS.gene64855:intron | 20.0% |
!! | ATAAATAAAACAAGGCAAAA+TGG | + | chr5.3:13644366-13644385 | MS.gene64855:intron | 20.0% |
!! | ATAAGGAGAAATAGAAAAAA+AGG | - | chr5.3:13640747-13640766 | None:intergenic | 20.0% |
!! | ATATTTAATTATTAAGGGAG+AGG | + | chr5.3:13641581-13641600 | MS.gene64855:intron | 20.0% |
!! | ATTAAATTTCACTGAATCAA+CGG | + | chr5.3:13639465-13639484 | MS.gene64855:intron | 20.0% |
!! | ATTCAAAATTCTTAACAAAG+TGG | + | chr5.3:13643391-13643410 | MS.gene64855:CDS | 20.0% |
!! | ATTGAAGAACATAATTCTAT+TGG | - | chr5.3:13638654-13638673 | None:intergenic | 20.0% |
!! | GAGAATACAAATTAATATAG+TGG | + | chr5.3:13642323-13642342 | MS.gene64855:intron | 20.0% |
!! | GAGGAATATAATAAAAAACT+TGG | + | chr5.3:13642136-13642155 | MS.gene64855:intron | 20.0% |
!! | GCATGATAATAAATAAAACA+AGG | + | chr5.3:13644358-13644377 | MS.gene64855:intron | 20.0% |
!! | TATTTAATTATTAAGGGAGA+GGG | + | chr5.3:13641582-13641601 | MS.gene64855:intron | 20.0% |
!! | TGAATTATGTTGATCAAAAA+GGG | + | chr5.3:13643519-13643538 | MS.gene64855:CDS | 20.0% |
!!! | AAAATATTAAAAGTATTGGG+TGG | + | chr5.3:13644074-13644093 | MS.gene64855:intron | 20.0% |
!!! | AAATAAAGTTTTTCAAAGAC+TGG | - | chr5.3:13640400-13640419 | None:intergenic | 20.0% |
!!! | AAATTTTTCTTTTCAAGGAA+GGG | + | chr5.3:13641640-13641659 | MS.gene64855:intron | 20.0% |
!!! | ATTTTTTATTAGGCTTTTCT+TGG | - | chr5.3:13641322-13641341 | None:intergenic | 20.0% |
!!! | TAAATTTTTCTTTTCAAGGA+AGG | + | chr5.3:13641639-13641658 | MS.gene64855:intron | 20.0% |
!!! | TCTAATATATTTTGAATGAG+AGG | - | chr5.3:13641038-13641057 | None:intergenic | 20.0% |
!!! | TGTTGTTATTTTTTTATTGG+TGG | - | chr5.3:13641983-13642002 | None:intergenic | 20.0% |
!!! | TTGTTAAGAATTTTGAATGA+TGG | - | chr5.3:13643389-13643408 | None:intergenic | 20.0% |
!!! | TTTCATATTTTTTTTCCTTC+AGG | + | chr5.3:13640109-13640128 | MS.gene64855:intron | 20.0% |
!!! | TTTGATGTTAATATTGGTTA+TGG | + | chr5.3:13643425-13643444 | MS.gene64855:CDS | 20.0% |
!!! | TTTTGTAAATAATCAAATGG+AGG | - | chr5.3:13642282-13642301 | None:intergenic | 20.0% |
! | AAGAAGTTCATCGTATATTA+AGG | - | chr5.3:13642946-13642965 | None:intergenic | 25.0% |
! | AAGATTATTACATGCTTGTT+TGG | - | chr5.3:13644398-13644417 | None:intergenic | 25.0% |
! | AATTGTACACTATAGTAGAT+TGG | + | chr5.3:13640794-13640813 | MS.gene64855:intron | 25.0% |
! | ACCAATAAAAAAATTGTTCC+GGG | + | chr5.3:13641941-13641960 | MS.gene64855:intron | 25.0% |
! | ACGTAATTAGCAGTTAATTA+TGG | + | chr5.3:13639046-13639065 | MS.gene64855:intron | 25.0% |
! | ATAGAATTCAAAATACAAGG+AGG | + | chr5.3:13642117-13642136 | MS.gene64855:intron | 25.0% |
! | ATAGGTGAAATCATGTTTAA+AGG | + | chr5.3:13643620-13643639 | MS.gene64855:CDS | 25.0% |
! | ATCGATTACACTAATCAATT+TGG | + | chr5.3:13638977-13638996 | MS.gene64855:intron | 25.0% |
! | ATCTTGTATTAGGACAATAA+AGG | - | chr5.3:13642889-13642908 | None:intergenic | 25.0% |
! | ATGTAATTCAAACATCTTTG+AGG | - | chr5.3:13640978-13640997 | None:intergenic | 25.0% |
! | ATTATATTTGGTCATGAAGA+GGG | - | chr5.3:13638448-13638467 | None:intergenic | 25.0% |
! | CACCAATAAAAAAATTGTTC+CGG | + | chr5.3:13641940-13641959 | MS.gene64855:intron | 25.0% |
! | CATTAGAATGTCTTCAATAT+GGG | + | chr5.3:13640425-13640444 | MS.gene64855:intron | 25.0% |
! | CTGAATTATGTTGATCAAAA+AGG | + | chr5.3:13643518-13643537 | MS.gene64855:CDS | 25.0% |
! | CTTGGATTTGATGTTAATAT+TGG | + | chr5.3:13643419-13643438 | MS.gene64855:CDS | 25.0% |
! | GAAAGATAATGCAATGAATA+TGG | - | chr5.3:13642061-13642080 | None:intergenic | 25.0% |
! | GAATTAATGTAGTCATCATA+GGG | - | chr5.3:13638371-13638390 | None:intergenic | 25.0% |
! | GAATTATGTTGATCAAAAAG+GGG | + | chr5.3:13643520-13643539 | MS.gene64855:CDS | 25.0% |
! | GATGATTGAACTTGATTATT+GGG | + | chr5.3:13638797-13638816 | MS.gene64855:intron | 25.0% |
! | GGTAAACTGTAACAAAATAT+TGG | - | chr5.3:13638633-13638652 | None:intergenic | 25.0% |
! | GGTCATTAAATCATACAATT+AGG | + | chr5.3:13638746-13638765 | MS.gene64855:intron | 25.0% |
! | GTTGGTTAGGTAAATTTATT+TGG | - | chr5.3:13642561-13642580 | None:intergenic | 25.0% |
! | TAAATAGTATTCCAGAGTAT+TGG | + | chr5.3:13639076-13639095 | MS.gene64855:intron | 25.0% |
! | TAGGTGAAATCATGTTTAAA+GGG | + | chr5.3:13643621-13643640 | MS.gene64855:CDS | 25.0% |
! | TATAATGAGCAATTACATGT+TGG | - | chr5.3:13642579-13642598 | None:intergenic | 25.0% |
! | TATATAATATATGCAAGGTC+CGG | + | chr5.3:13641899-13641918 | MS.gene64855:intron | 25.0% |
! | TCTTGTATTAGGACAATAAA+GGG | - | chr5.3:13642888-13642907 | None:intergenic | 25.0% |
! | TGTAATTCAAACATCTTTGA+GGG | + | chr5.3:13641696-13641715 | MS.gene64855:intron | 25.0% |
! | TGTAATTCAAACATCTTTGA+GGG | - | chr5.3:13641715-13641696 | None:intergenic | 25.0% |
! | TGTAATTCAAGCATCTTATA+GGG | + | chr5.3:13641606-13641625 | MS.gene64855:intron | 25.0% |
! | TTATCAATAGACCAAGTATT+TGG | + | chr5.3:13640055-13640074 | MS.gene64855:intron | 25.0% |
! | TTCAAATTGAAAGAACCATT+AGG | - | chr5.3:13643743-13643762 | None:intergenic | 25.0% |
! | TTCAGAAGAGAATGAAAATA+AGG | - | chr5.3:13640764-13640783 | None:intergenic | 25.0% |
! | TTGTAATTCAAGCATCTTAT+AGG | + | chr5.3:13641605-13641624 | MS.gene64855:intron | 25.0% |
! | TTTAAACATGATTTCACCTA+TGG | - | chr5.3:13643621-13643640 | None:intergenic | 25.0% |
!! | AAATGTAGCTTGTCTAATTT+CGG | + | chr5.3:13642362-13642381 | MS.gene64855:intron | 25.0% |
!! | ATGATCATGTTAGATTTTCT+TGG | + | chr5.3:13638249-13638268 | MS.gene64855:CDS | 25.0% |
!! | TAATGACCAATTTAAAACCA+TGG | - | chr5.3:13638734-13638753 | None:intergenic | 25.0% |
!! | TATTAGGCATTTTTCTCATA+AGG | + | chr5.3:13643337-13643356 | MS.gene64855:CDS | 25.0% |
!!! | AACAATTTTTTTATTGGTGG+TGG | - | chr5.3:13641939-13641958 | None:intergenic | 25.0% |
!!! | AATTTTTCTTTTCAAGGAAG+GGG | + | chr5.3:13641641-13641660 | MS.gene64855:intron | 25.0% |
!!! | AGTGCATATTTTAACATAAG+AGG | + | chr5.3:13641664-13641683 | MS.gene64855:intron | 25.0% |
!!! | AGTGTAGATTTTAACATAAG+AGG | - | chr5.3:13641111-13641130 | None:intergenic | 25.0% |
!!! | ATAATTAGGGTCTTGTTAAT+CGG | - | chr5.3:13639235-13639254 | None:intergenic | 25.0% |
!!! | ATGTATTTCAAGTTTCTCTT+AGG | - | chr5.3:13641080-13641099 | None:intergenic | 25.0% |
!!! | GAATTCCAAATTTTTCAAAG+GGG | + | chr5.3:13642466-13642485 | MS.gene64855:intron | 25.0% |
!!! | GGAATTCCAAATTTTTCAAA+GGG | + | chr5.3:13642465-13642484 | MS.gene64855:intron | 25.0% |
!!! | GTGCATATTTTAACATAAGA+GGG | + | chr5.3:13641665-13641684 | MS.gene64855:intron | 25.0% |
!!! | GTGTAGATTTTAACATAAGA+GGG | - | chr5.3:13641110-13641129 | None:intergenic | 25.0% |
!!! | TCATGAAAACTTGTTTGTTT+TGG | - | chr5.3:13639322-13639341 | None:intergenic | 25.0% |
!!! | TGCATATTTTAACATAAGAG+GGG | + | chr5.3:13641666-13641685 | MS.gene64855:intron | 25.0% |
!!! | TGGAATTCCAAATTTTTCAA+AGG | + | chr5.3:13642464-13642483 | MS.gene64855:intron | 25.0% |
!!! | TGTAGATTTTAACATAAGAG+GGG | - | chr5.3:13641109-13641128 | None:intergenic | 25.0% |
!!! | TGTATTTCAAGTTTCTCTTA+GGG | - | chr5.3:13641079-13641098 | None:intergenic | 25.0% |
!!! | TGTTATTTTTTTATTGGTGG+TGG | - | chr5.3:13641980-13641999 | None:intergenic | 25.0% |
!!! | TTCTATCCATGGTTTTAAAT+TGG | + | chr5.3:13638725-13638744 | MS.gene64855:intron | 25.0% |
AAACAGAATGATGTCAGAAA+AGG | - | chr5.3:13640485-13640504 | None:intergenic | 30.0% | |
AAATAGTTAATAAGCTCCAC+AGG | + | chr5.3:13638772-13638791 | MS.gene64855:intron | 30.0% | |
AACATGATCATTGTAGATGA+TGG | - | chr5.3:13638240-13638259 | None:intergenic | 30.0% | |
AATAGACCATGTACAAGAAT+GGG | - | chr5.3:13640724-13640743 | None:intergenic | 30.0% | |
ACAACACATACAACACATTT+GGG | + | chr5.3:13640627-13640646 | MS.gene64855:intron | 30.0% | |
AGAATTATTTCAGATCCTGA+AGG | - | chr5.3:13640127-13640146 | None:intergenic | 30.0% | |
AGATCAATTAGATGCTCATA+TGG | + | chr5.3:13643979-13643998 | MS.gene64855:CDS | 30.0% | |
AGTTTGCAATAATTTCCAGA+AGG | - | chr5.3:13643310-13643329 | None:intergenic | 30.0% | |
ATACGATGAACTTCTTGAAA+AGG | + | chr5.3:13642950-13642969 | MS.gene64855:CDS | 30.0% | |
ATAGGATCACATTCATTTCT+AGG | - | chr5.3:13643002-13643021 | None:intergenic | 30.0% | |
ATATAATATATGCAAGGTCC+GGG | + | chr5.3:13641900-13641919 | MS.gene64855:intron | 30.0% | |
ATCTTCTAACTCCAAATACT+TGG | - | chr5.3:13640069-13640088 | None:intergenic | 30.0% | |
ATTCTATAAGCGCGTAATTA+TGG | + | chr5.3:13640142-13640161 | MS.gene64855:intron | 30.0% | |
ATTGAGGTCTTCATATGTAT+AGG | - | chr5.3:13642620-13642639 | None:intergenic | 30.0% | |
ATTGTCCTAATACAAGATCA+TGG | + | chr5.3:13642891-13642910 | MS.gene64855:CDS | 30.0% | |
CAACCATATTCATTGCATTT+CGG | + | chr5.3:13642089-13642108 | MS.gene64855:intron | 30.0% | |
CATTATATTTGGTCATGAAG+AGG | - | chr5.3:13638449-13638468 | None:intergenic | 30.0% | |
CCAATAAAAAAATTGTTCCG+GGG | + | chr5.3:13641942-13641961 | MS.gene64855:intron | 30.0% | |
CCATATTGAAGACATTCTAA+TGG | - | chr5.3:13640427-13640446 | None:intergenic | 30.0% | |
CCATTAGAATGTCTTCAATA+TGG | + | chr5.3:13640424-13640443 | MS.gene64855:intron | 30.0% | |
CGAATTAATGTAGTCATCAT+AGG | - | chr5.3:13638372-13638391 | None:intergenic | 30.0% | |
CGGAAAAAAAATAGTATTGC+AGG | + | chr5.3:13641193-13641212 | MS.gene64855:intron | 30.0% | |
CTTTAGATGAAATGAAAGCA+GGG | - | chr5.3:13638409-13638428 | None:intergenic | 30.0% | |
GACTTTGATAGAAAACCTAA+TGG | - | chr5.3:13642207-13642226 | None:intergenic | 30.0% | |
GAGAGAAATGAACTTTGTAA+AGG | - | chr5.3:13639928-13639947 | None:intergenic | 30.0% | |
GCAATTGTGAAATTGAAAGA+TGG | + | chr5.3:13643917-13643936 | MS.gene64855:CDS | 30.0% | |
GGATGATTGAACTTGATTAT+TGG | + | chr5.3:13638796-13638815 | MS.gene64855:intron | 30.0% | |
GTAATTCAAGCATCTTATAG+GGG | + | chr5.3:13641607-13641626 | MS.gene64855:intron | 30.0% | |
GTCAACTTAGGAATTTCTAA+TGG | + | chr5.3:13638314-13638333 | MS.gene64855:CDS | 30.0% | |
GTGTAATTCAAACATCTTTG+AGG | + | chr5.3:13641695-13641714 | MS.gene64855:intron | 30.0% | |
GTTTGCAATAATTTCCAGAA+GGG | - | chr5.3:13643309-13643328 | None:intergenic | 30.0% | |
TAACCGAAATGCAATGAATA+TGG | - | chr5.3:13642095-13642114 | None:intergenic | 30.0% | |
TACGATGAACTTCTTGAAAA+GGG | + | chr5.3:13642951-13642970 | MS.gene64855:CDS | 30.0% | |
TATGGTATGACTGAAACATT+AGG | + | chr5.3:13643443-13643462 | MS.gene64855:CDS | 30.0% | |
TCGTGCATGAATTAATTAAC+TGG | + | chr5.3:13638673-13638692 | MS.gene64855:intron | 30.0% | |
TGAAGCAATTCATGTTCATA+AGG | + | chr5.3:13643259-13643278 | MS.gene64855:CDS | 30.0% | |
TGATAAGGTAAGTAAAGTCT+AGG | - | chr5.3:13638836-13638855 | None:intergenic | 30.0% | |
TGGTGTGACTCAATTAATTA+AGG | + | chr5.3:13644094-13644113 | MS.gene64855:intron | 30.0% | |
TTATAAACAGGTTGCAACTT+TGG | + | chr5.3:13642653-13642672 | MS.gene64855:intron | 30.0% | |
TTCAATTTCACAATTGCACA+AGG | - | chr5.3:13643914-13643933 | None:intergenic | 30.0% | |
TTCCACTTTCTTACAATAAC+TGG | - | chr5.3:13643470-13643489 | None:intergenic | 30.0% | |
TTGCAAACTGTGACATTATT+AGG | + | chr5.3:13643321-13643340 | MS.gene64855:CDS | 30.0% | |
TTTCTTAATGGCGTAAATTC+TGG | - | chr5.3:13640326-13640345 | None:intergenic | 30.0% | |
! | AAGGCTTTTATATATTGCCA+AGG | + | chr5.3:13639761-13639780 | MS.gene64855:intron | 30.0% |
! | TAATTTGGAGTTCAGTGATA+AGG | - | chr5.3:13638851-13638870 | None:intergenic | 30.0% |
! | TAGATAAACAGTGTTGAACA+CGG | - | chr5.3:13640190-13640209 | None:intergenic | 30.0% |
! | TCGTATATTAAGGTATCTTG+AGG | - | chr5.3:13642936-13642955 | None:intergenic | 30.0% |
! | TGATTATAAACTGCTCCTTT+TGG | - | chr5.3:13643059-13643078 | None:intergenic | 30.0% |
! | TTTGTCCCCTTTGAAAAATT+TGG | - | chr5.3:13642474-13642493 | None:intergenic | 30.0% |
! | TTTTCTGACATCATTCTGTT+TGG | + | chr5.3:13640484-13640503 | MS.gene64855:intron | 30.0% |
!! | GTATTTCAAGTTTCTCTTAG+GGG | - | chr5.3:13641078-13641097 | None:intergenic | 30.0% |
!! | TGTTTTGTTGAATCATCCAA+TGG | + | chr5.3:13643826-13643845 | MS.gene64855:CDS | 30.0% |
!!! | AAAGGCTTTTTTGAATTCGA+TGG | - | chr5.3:13639910-13639929 | None:intergenic | 30.0% |
!!! | CGGAACAATTTTTTTATTGG+TGG | - | chr5.3:13641942-13641961 | None:intergenic | 30.0% |
AAAACATGAAGCACACCATT+AGG | + | chr5.3:13642189-13642208 | MS.gene64855:intron | 35.0% | |
AAAGGGAATACTTCAATGTC+AGG | + | chr5.3:13643638-13643657 | MS.gene64855:CDS | 35.0% | |
AAATGAAGTTCATAGTGTGC+TGG | - | chr5.3:13642690-13642709 | None:intergenic | 35.0% | |
AAGAGGGAACAAACAATAGT+TGG | - | chr5.3:13638432-13638451 | None:intergenic | 35.0% | |
AAGCGCGTAATTATGGAAAA+TGG | + | chr5.3:13640149-13640168 | MS.gene64855:intron | 35.0% | |
AAGGGAATACTTCAATGTCA+GGG | + | chr5.3:13643639-13643658 | MS.gene64855:CDS | 35.0% | |
AAGGTTGAGACATCTTTCAT+AGG | - | chr5.3:13638282-13638301 | None:intergenic | 35.0% | |
AATCCTTAACCAATACTCTG+AGG | + | chr5.3:13639412-13639431 | MS.gene64855:intron | 35.0% | |
AATGTGTTGTATGTGTTGTG+TGG | - | chr5.3:13640626-13640645 | None:intergenic | 35.0% | |
ACAAAACAAATGATGTGGGA+GGG | - | chr5.3:13642394-13642413 | None:intergenic | 35.0% | |
ACAAACTAGTGTTCTATCCA+TGG | + | chr5.3:13638714-13638733 | MS.gene64855:intron | 35.0% | |
ACAAGAATGGGGAAAATACT+TGG | - | chr5.3:13640712-13640731 | None:intergenic | 35.0% | |
ACACATTGTCACACAATATC+TGG | + | chr5.3:13640599-13640618 | MS.gene64855:intron | 35.0% | |
ACATGTTTAGATGCAATGGA+TGG | + | chr5.3:13643159-13643178 | MS.gene64855:CDS | 35.0% | |
ACCGTACAAAACAAATGATG+TGG | - | chr5.3:13642399-13642418 | None:intergenic | 35.0% | |
ACCTTACCAGTTGAATTAAG+AGG | - | chr5.3:13644034-13644053 | None:intergenic | 35.0% | |
AGAAAGGGGATCTCATAATT+TGG | - | chr5.3:13638866-13638885 | None:intergenic | 35.0% | |
AGAGTTGTGAGATCATTACT+TGG | + | chr5.3:13639343-13639362 | MS.gene64855:intron | 35.0% | |
AGCGCGTAATTATGGAAAAT+GGG | + | chr5.3:13640150-13640169 | MS.gene64855:intron | 35.0% | |
ATAGACCATGTACAAGAATG+GGG | - | chr5.3:13640723-13640742 | None:intergenic | 35.0% | |
ATATCAGTGAACTACACATC+AGG | + | chr5.3:13643020-13643039 | MS.gene64855:CDS | 35.0% | |
ATCGTTTACCAACTCTAACA+TGG | + | chr5.3:13639996-13640015 | MS.gene64855:intron | 35.0% | |
ATGCTTAACCAATGTCATTG+GGG | - | chr5.3:13639299-13639318 | None:intergenic | 35.0% | |
ATTACAACACACACCATTCT+TGG | + | chr5.3:13640523-13640542 | MS.gene64855:intron | 35.0% | |
CAAGAATGGGGAAAATACTT+GGG | - | chr5.3:13640711-13640730 | None:intergenic | 35.0% | |
CACAACACATACAACACATT+TGG | + | chr5.3:13640626-13640645 | MS.gene64855:intron | 35.0% | |
CACATTGTCACACAATATCT+GGG | + | chr5.3:13640600-13640619 | MS.gene64855:intron | 35.0% | |
CATAAGGTAACACATTTGTG+TGG | + | chr5.3:13643275-13643294 | MS.gene64855:CDS | 35.0% | |
CCGTACAAAACAAATGATGT+GGG | - | chr5.3:13642398-13642417 | None:intergenic | 35.0% | |
GAAATGTCAATGACCTAACT+CGG | - | chr5.3:13640295-13640314 | None:intergenic | 35.0% | |
GAATAGACCATGTACAAGAA+TGG | - | chr5.3:13640725-13640744 | None:intergenic | 35.0% | |
GAGGTATATCTTTCACTAGT+TGG | - | chr5.3:13642917-13642936 | None:intergenic | 35.0% | |
GATGCTTAACCAATGTCATT+GGG | - | chr5.3:13639300-13639319 | None:intergenic | 35.0% | |
GATGTGTAGTTCACTGATAT+AGG | - | chr5.3:13643020-13643039 | None:intergenic | 35.0% | |
GATTTGCCTCTTAATTCAAC+TGG | + | chr5.3:13644025-13644044 | MS.gene64855:CDS | 35.0% | |
GGAACACTCTTCATTGTATT+TGG | - | chr5.3:13643584-13643603 | None:intergenic | 35.0% | |
GGAGTTAGAAGATGATTCAT+TGG | + | chr5.3:13640076-13640095 | MS.gene64855:intron | 35.0% | |
GTCCAGTTATTGTAAGAAAG+TGG | + | chr5.3:13643465-13643484 | MS.gene64855:CDS | 35.0% | |
GTTGACATGTTTAGATGCAA+TGG | + | chr5.3:13643155-13643174 | MS.gene64855:CDS | 35.0% | |
TAATAGTCGCGAGTGAATTA+AGG | - | chr5.3:13643094-13643113 | None:intergenic | 35.0% | |
TAATGGCGTAAATTCTGGTA+TGG | - | chr5.3:13640321-13640340 | None:intergenic | 35.0% | |
TACAAAACAAATGATGTGGG+AGG | - | chr5.3:13642395-13642414 | None:intergenic | 35.0% | |
TACACTATAGTAGATTGGTG+TGG | + | chr5.3:13640799-13640818 | MS.gene64855:intron | 35.0% | |
TATAATATATGCAAGGTCCG+GGG | + | chr5.3:13641901-13641920 | MS.gene64855:intron | 35.0% | |
TCATTAAGTGACTGCAAAAC+TGG | - | chr5.3:13639014-13639033 | None:intergenic | 35.0% | |
TGACTCAATTAATTAAGGCG+TGG | + | chr5.3:13644099-13644118 | MS.gene64855:intron | 35.0% | |
TGAGTTTGTGAGTTCATTAG+AGG | + | chr5.3:13643796-13643815 | MS.gene64855:CDS | 35.0% | |
TGTATTAGGACAATAAAGGG+TGG | - | chr5.3:13642885-13642904 | None:intergenic | 35.0% | |
TTACAACACACACCATTCTT+GGG | + | chr5.3:13640524-13640543 | MS.gene64855:intron | 35.0% | |
! | AAGTGAGTCATGAAGCTTTT+AGG | + | chr5.3:13643678-13643697 | MS.gene64855:CDS | 35.0% |
! | ACAGCTACTTTCAAAACCAT+TGG | - | chr5.3:13643845-13643864 | None:intergenic | 35.0% |
! | AGTGAGTCATGAAGCTTTTA+GGG | + | chr5.3:13643679-13643698 | MS.gene64855:CDS | 35.0% |
! | ATGTTGTTGCATCTAGTTTG+AGG | - | chr5.3:13642752-13642771 | None:intergenic | 35.0% |
! | ATTCAAACATCTTTGAGGGA+AGG | + | chr5.3:13641700-13641719 | MS.gene64855:intron | 35.0% |
! | ATTTTCCCCATTCTTGTACA+TGG | + | chr5.3:13640715-13640734 | MS.gene64855:intron | 35.0% |
! | CCATATGATGGAAAAACCAT+AGG | + | chr5.3:13643602-13643621 | MS.gene64855:CDS | 35.0% |
! | CCTATGGTTTTTCCATCATA+TGG | - | chr5.3:13643605-13643624 | None:intergenic | 35.0% |
! | GCACACTATGAACTTCATTT+TGG | + | chr5.3:13642690-13642709 | MS.gene64855:CDS | 35.0% |
! | GCTTTAGATGAAATGAAAGC+AGG | - | chr5.3:13638410-13638429 | None:intergenic | 35.0% |
! | GGATAGAACACTAGTTTGTA+TGG | - | chr5.3:13638713-13638732 | None:intergenic | 35.0% |
! | GGTGATGGTTGAATCAAAAT+CGG | + | chr5.3:13644183-13644202 | MS.gene64855:intron | 35.0% |
! | TAATCGGTGTCTTTGTCTTT+GGG | - | chr5.3:13639219-13639238 | None:intergenic | 35.0% |
! | TATCATGCAAACCACTGATT+TGG | - | chr5.3:13644346-13644365 | None:intergenic | 35.0% |
! | TCTCATAATTTGGAGTTCAG+TGG | - | chr5.3:13638856-13638875 | None:intergenic | 35.0% |
! | TGAGCAATTACATGTTGGTT+AGG | - | chr5.3:13642574-13642593 | None:intergenic | 35.0% |
! | TTAATCGGTGTCTTTGTCTT+TGG | - | chr5.3:13639220-13639239 | None:intergenic | 35.0% |
! | TTAATTAAGGCGTGGTTTGT+AGG | + | chr5.3:13644107-13644126 | MS.gene64855:intron | 35.0% |
! | TTCAAACATCTTTGAGGGAA+GGG | + | chr5.3:13641701-13641720 | MS.gene64855:intron | 35.0% |
!! | ACTTCATTTTGGTGTACCAA+TGG | + | chr5.3:13642701-13642720 | MS.gene64855:CDS | 35.0% |
!! | AGATTTTAACATAAGAGGGG+AGG | - | chr5.3:13641106-13641125 | None:intergenic | 35.0% |
!! | AGGGGTTATTGACTTTATGA+TGG | + | chr5.3:13643538-13643557 | MS.gene64855:CDS | 35.0% |
!! | ATCCTATGCTGGTGTTTTTA+TGG | + | chr5.3:13643129-13643148 | MS.gene64855:CDS | 35.0% |
!! | ATGAAGAGTGTTCCATATGA+TGG | + | chr5.3:13643590-13643609 | MS.gene64855:CDS | 35.0% |
!! | TATTTTGAATGAGAGGTGAG+AGG | - | chr5.3:13641031-13641050 | None:intergenic | 35.0% |
!! | TTTTGAAAGTAGCTGTTGTG+GGG | + | chr5.3:13643849-13643868 | MS.gene64855:CDS | 35.0% |
!!! | ATTTTTTTATTGGTGGTGGC+CGG | - | chr5.3:13641935-13641954 | None:intergenic | 35.0% |
!!! | CCCACATCATTTGTTTTGTA+CGG | + | chr5.3:13642395-13642414 | MS.gene64855:intron | 35.0% |
!!! | CCCCGGAACAATTTTTTTAT+TGG | - | chr5.3:13641945-13641964 | None:intergenic | 35.0% |
!!! | GTTTTGAAAGTAGCTGTTGT+GGG | + | chr5.3:13643848-13643867 | MS.gene64855:CDS | 35.0% |
AAGCTCCATTACTCACAGAA+AGG | - | chr5.3:13638882-13638901 | None:intergenic | 40.0% | |
ACACACTGTAGTTAGAACCT+TGG | - | chr5.3:13639781-13639800 | None:intergenic | 40.0% | |
AGCTCCATTACTCACAGAAA+GGG | - | chr5.3:13638881-13638900 | None:intergenic | 40.0% | |
AGGGTGGCTTGAAATTTCTT+TGG | - | chr5.3:13642869-13642888 | None:intergenic | 40.0% | |
ATCCTCCATTACTCACAGAA+AGG | - | chr5.3:13638932-13638951 | None:intergenic | 40.0% | |
ATGAAATGAAAGCAGGGCAA+AGG | - | chr5.3:13638403-13638422 | None:intergenic | 40.0% | |
ATTAAATCTGGGCCACACAA+AGG | - | chr5.3:13640668-13640687 | None:intergenic | 40.0% | |
ATTTGGTTAATGCCTGCTCT+TGG | + | chr5.3:13643188-13643207 | MS.gene64855:CDS | 40.0% | |
CAAAACAAATGATGTGGGAG+GGG | - | chr5.3:13642393-13642412 | None:intergenic | 40.0% | |
CAATCATGCAGTCTGCATAT+CGG | - | chr5.3:13644299-13644318 | None:intergenic | 40.0% | |
CATTAGGTAACCTAACACCT+AGG | - | chr5.3:13643727-13643746 | None:intergenic | 40.0% | |
CATTGTGAACTTAGCTCAGT+TGG | + | chr5.3:13641855-13641874 | MS.gene64855:intron | 40.0% | |
CTAGGTGTTAGGTTACCTAA+TGG | + | chr5.3:13643725-13643744 | MS.gene64855:CDS | 40.0% | |
GAAATAATAGCACCTGCCAT+TGG | - | chr5.3:13642720-13642739 | None:intergenic | 40.0% | |
GCAATAATTTCCAGAAGGGT+AGG | - | chr5.3:13643305-13643324 | None:intergenic | 40.0% | |
GCAATGGATGGTGTTTCATT+TGG | + | chr5.3:13643171-13643190 | MS.gene64855:CDS | 40.0% | |
GCCTCTTAATTCAACTGGTA+AGG | + | chr5.3:13644030-13644049 | MS.gene64855:intron | 40.0% | |
GGATGCTTAACCAATGTCAT+TGG | - | chr5.3:13639301-13639320 | None:intergenic | 40.0% | |
GGGTGGCTTGAAATTTCTTT+GGG | - | chr5.3:13642868-13642887 | None:intergenic | 40.0% | |
GGGTTGTATAACCAATACTC+TGG | - | chr5.3:13639090-13639109 | None:intergenic | 40.0% | |
GTAGTCATCATAGGGAGATA+GGG | - | chr5.3:13638363-13638382 | None:intergenic | 40.0% | |
GTCACCGTGACATTAAATCT+GGG | - | chr5.3:13640586-13640567 | None:intergenic | 40.0% | |
GTCCATAAAAACACCAGCAT+AGG | - | chr5.3:13643134-13643153 | None:intergenic | 40.0% | |
GTGGCTCAGATTTAATGTCA+CGG | - | chr5.3:13640574-13640593 | None:intergenic | 40.0% | |
GTTGGCCATGATCTTGTATT+AGG | - | chr5.3:13642899-13642918 | None:intergenic | 40.0% | |
GTTTGTGAGTTCATTAGAGG+TGG | + | chr5.3:13643799-13643818 | MS.gene64855:CDS | 40.0% | |
TAGTTAATAAGCTCCACAGG+AGG | + | chr5.3:13638775-13638794 | MS.gene64855:intron | 40.0% | |
TCAAGCATCTTATAGGGGAA+GGG | + | chr5.3:13641612-13641631 | MS.gene64855:intron | 40.0% | |
TCATATGGTTCCTAAGAGTG+TGG | + | chr5.3:13643994-13644013 | MS.gene64855:CDS | 40.0% | |
TCCTCCATTACTCACAGAAA+GGG | - | chr5.3:13638931-13638950 | None:intergenic | 40.0% | |
TGTAGTCATCATAGGGAGAT+AGG | - | chr5.3:13638364-13638383 | None:intergenic | 40.0% | |
TGTCACCGTGACATTAAATC+TGG | - | chr5.3:13640585-13640566 | None:intergenic | 40.0% | |
TTCAAGCATCTTATAGGGGA+AGG | + | chr5.3:13641611-13641630 | MS.gene64855:intron | 40.0% | |
TTCATGCAGTCCACATACAT+CGG | + | chr5.3:13644162-13644181 | MS.gene64855:intron | 40.0% | |
TTTCGATGTGAATCCTATGC+TGG | + | chr5.3:13643118-13643137 | MS.gene64855:CDS | 40.0% | |
! | AATCGGTGTCTTTGTCTTTG+GGG | - | chr5.3:13639218-13639237 | None:intergenic | 40.0% |
! | TCAAACATCTTTGAGGGAAG+GGG | + | chr5.3:13641702-13641721 | MS.gene64855:intron | 40.0% |
! | TCATAGTGTGCTGGAGTATT+TGG | - | chr5.3:13642681-13642700 | None:intergenic | 40.0% |
! | TGAACTTAGCTCAGTTGGTA+TGG | + | chr5.3:13641860-13641879 | MS.gene64855:intron | 40.0% |
! | TTCAAGTTTCTCTTAGGGGT+GGG | - | chr5.3:13641074-13641093 | None:intergenic | 40.0% |
!! | AGTCATGAAGCTTTTAGGGA+TGG | + | chr5.3:13643683-13643702 | MS.gene64855:CDS | 40.0% |
!! | ATGAAGCTTTTAGGGATGGT+TGG | + | chr5.3:13643687-13643706 | MS.gene64855:CDS | 40.0% |
!! | CTTTTAGGGATGGTTGGTAT+AGG | + | chr5.3:13643693-13643712 | MS.gene64855:CDS | 40.0% |
!! | TGTCCTCAGAGTATTGGTTA+AGG | - | chr5.3:13639418-13639437 | None:intergenic | 40.0% |
!! | TTTCAAGTTTCTCTTAGGGG+TGG | - | chr5.3:13641075-13641094 | None:intergenic | 40.0% |
!!! | GGTTTTGAAAGTAGCTGTTG+TGG | + | chr5.3:13643847-13643866 | MS.gene64855:CDS | 40.0% |
!!! | GTGTGCTTCATGTTTTGACT+AGG | - | chr5.3:13642185-13642204 | None:intergenic | 40.0% |
!!! | TTTTTTTATTGGTGGTGGCC+GGG | - | chr5.3:13641934-13641953 | None:intergenic | 40.0% |
AACCAATGTCATTGGGGTAC+TGG | - | chr5.3:13639293-13639312 | None:intergenic | 45.0% | |
AACCAGTACCCCAATGACAT+TGG | + | chr5.3:13639288-13639307 | MS.gene64855:intron | 45.0% | |
AACCAGTGTCCTCAGAGTAT+TGG | - | chr5.3:13639424-13639443 | None:intergenic | 45.0% | |
AACCTTGTCACCATACACAG+TGG | - | chr5.3:13638216-13638235 | None:intergenic | 45.0% | |
AACTACACATCAGGCTCAAC+TGG | + | chr5.3:13643029-13643048 | MS.gene64855:CDS | 45.0% | |
AGTTGACCAAAGCAGAAGCA+AGG | - | chr5.3:13638301-13638320 | None:intergenic | 45.0% | |
CAAGTTCAATCATCCTCCTG+TGG | - | chr5.3:13638791-13638810 | None:intergenic | 45.0% | |
CACAACACAACACCTTTGTG+TGG | + | chr5.3:13640653-13640672 | MS.gene64855:intron | 45.0% | |
CCTAACTCGGTCTTAGAACA+AGG | - | chr5.3:13640282-13640301 | None:intergenic | 45.0% | |
CCTCCATTACTCACAGAAAG+GGG | - | chr5.3:13638930-13638949 | None:intergenic | 45.0% | |
CGTTTGAGCCATGTTAGAGT+TGG | - | chr5.3:13640007-13640026 | None:intergenic | 45.0% | |
CTTAACAAAGTGGCAGAGCT+TGG | + | chr5.3:13643401-13643420 | MS.gene64855:CDS | 45.0% | |
GATCCCCTTTCTGTGAGTAA+TGG | + | chr5.3:13638874-13638893 | MS.gene64855:intron | 45.0% | |
GCTCCATTACTCACAGAAAG+GGG | - | chr5.3:13638880-13638899 | None:intergenic | 45.0% | |
GCTTCTGCTTTGGTCAACTT+AGG | + | chr5.3:13638302-13638321 | MS.gene64855:CDS | 45.0% | |
GGCTCAACTGGAATTCCAAA+AGG | + | chr5.3:13643041-13643060 | MS.gene64855:CDS | 45.0% | |
GTGGCCCAGATTTAATGTCA+CGG | + | chr5.3:13640672-13640691 | MS.gene64855:intron | 45.0% | |
GTGTGACAATGTGTGTTGTG+TGG | - | chr5.3:13640593-13640612 | None:intergenic | 45.0% | |
TCAACCATCACCGATGTATG+TGG | - | chr5.3:13644175-13644194 | None:intergenic | 45.0% | |
TCAAGTTTCTCTTAGGGGTG+GGG | - | chr5.3:13641073-13641092 | None:intergenic | 45.0% | |
TCACCAAACACCACACTCTT+AGG | - | chr5.3:13644007-13644026 | None:intergenic | 45.0% | |
TCTCAACCTTGCTTCTGCTT+TGG | + | chr5.3:13638292-13638311 | MS.gene64855:CDS | 45.0% | |
! | AACCAATACTCTGAGGACAC+TGG | + | chr5.3:13639419-13639438 | MS.gene64855:intron | 45.0% |
! | AAGGCGTGGTTTGTAGGATT+TGG | + | chr5.3:13644113-13644132 | MS.gene64855:intron | 45.0% |
! | GGATGGTTGGTATAGGACTA+GGG | + | chr5.3:13643700-13643719 | MS.gene64855:CDS | 45.0% |
! | GTGGGGAGATATGATGATGA+TGG | + | chr5.3:13643866-13643885 | MS.gene64855:CDS | 45.0% |
! | GTTCCTAAGAGTGTGGTGTT+TGG | + | chr5.3:13644001-13644020 | MS.gene64855:CDS | 45.0% |
!! | AACCTTTAGAGCACTCAACC+AGG | - | chr5.3:13638151-13638170 | None:intergenic | 45.0% |
!! | ACCATTCTTGGGAAGCACTT+GGG | + | chr5.3:13640535-13640554 | MS.gene64855:intron | 45.0% |
!! | AGGAAACTGATCGGTGTCAA+AGG | - | chr5.3:13638182-13638201 | None:intergenic | 45.0% |
!! | CATTTTGGTGTACCAATGGC+AGG | + | chr5.3:13642705-13642724 | MS.gene64855:CDS | 45.0% |
!! | CCTTGTTCTAAGACCGAGTT+AGG | + | chr5.3:13640279-13640298 | MS.gene64855:intron | 45.0% |
!! | GCTCGTTCTAGGAAACTGAT+CGG | - | chr5.3:13638191-13638210 | None:intergenic | 45.0% |
!! | TGATGATGGTGACGAGTGTT+TGG | + | chr5.3:13643880-13643899 | MS.gene64855:CDS | 45.0% |
!!! | TTTTTTATTGGTGGTGGCCG+GGG | - | chr5.3:13641933-13641952 | None:intergenic | 45.0% |
!! | ATATTAAATTTCATATTATA+AGG | + | chr5.3:13639257-13639276 | MS.gene64855:intron | 5.0% |
!! | GAAATTTAATATTTATAATT+AGG | - | chr5.3:13639249-13639268 | None:intergenic | 5.0% |
!! | TTATAAAATACAATAAATTA+TGG | + | chr5.3:13641380-13641399 | MS.gene64855:intron | 5.0% |
!!! | ATGAATTTATTTTTTTTAAA+TGG | + | chr5.3:13641493-13641512 | MS.gene64855:intron | 5.0% |
!!! | TCATATATATATATTTTTTT+TGG | + | chr5.3:13640213-13640232 | MS.gene64855:intron | 5.0% |
AAGGTGAGTGTCACAGTTGC+TGG | + | chr5.3:13643356-13643375 | MS.gene64855:CDS | 50.0% | |
ACCCAAGTGCTTCCCAAGAA+TGG | - | chr5.3:13640539-13640558 | None:intergenic | 50.0% | |
AGCCACTGTGTATGGTGACA+AGG | + | chr5.3:13638211-13638230 | MS.gene64855:CDS | 50.0% | |
ATGTTTGTGCCACCAAGAGC+AGG | - | chr5.3:13643203-13643222 | None:intergenic | 50.0% | |
CAGTCCACATACATCGGTGA+TGG | + | chr5.3:13644168-13644187 | MS.gene64855:intron | 50.0% | |
CCCCTTTCTGTGAGTAATGG+AGG | + | chr5.3:13638877-13638896 | MS.gene64855:intron | 50.0% | |
CTGCAGCAAAGCCAAATCAG+TGG | + | chr5.3:13644332-13644351 | MS.gene64855:intron | 50.0% | |
GACCTGGTTGAGTGCTCTAA+AGG | + | chr5.3:13638146-13638165 | MS.gene64855:CDS | 50.0% | |
TGACTGCAAAACTGGTCGCT+TGG | - | chr5.3:13639006-13639025 | None:intergenic | 50.0% | |
TGGTATAGGACTAGGGACCT+AGG | + | chr5.3:13643707-13643726 | MS.gene64855:CDS | 50.0% | |
TGGTTAATGCCTGCTCTTGG+TGG | + | chr5.3:13643191-13643210 | MS.gene64855:CDS | 50.0% | |
! | GGGATGGTTGGTATAGGACT+AGG | + | chr5.3:13643699-13643718 | MS.gene64855:CDS | 50.0% |
!! | CACCATTCTTGGGAAGCACT+TGG | + | chr5.3:13640534-13640553 | MS.gene64855:intron | 50.0% |
!! | TGTCTTTGTCTTTGGGGCAC+TGG | - | chr5.3:13639212-13639231 | None:intergenic | 50.0% |
ACACAGTGGCTGCTCGTTCT+AGG | - | chr5.3:13638202-13638221 | None:intergenic | 55.0% | |
GAACGAGCAGCCACTGTGTA+TGG | + | chr5.3:13638203-13638222 | MS.gene64855:CDS | 55.0% | |
GGACTAGGGACCTAGGTGTT+AGG | + | chr5.3:13643714-13643733 | MS.gene64855:CDS | 55.0% | |
TTGTTCCGGGGTTCAAACCC+CGG | + | chr5.3:13641954-13641973 | MS.gene64855:intron | 55.0% | |
AAGGTCCGGGGTTCAAACCC+CGG | + | chr5.3:13641913-13641932 | MS.gene64855:intron | 60.0% | |
GTGTGGTGCACCTACCCTTC+TGG | + | chr5.3:13643292-13643311 | MS.gene64855:CDS | 60.0% | |
GGTGGCCGGGGTTTGAACCC+CGG | - | chr5.3:13641921-13641940 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 13638137 | 13644454 | 13638137 | ID=MS.gene64855 |
chr5.3 | mRNA | 13638137 | 13644454 | 13638137 | ID=MS.gene64855.t1;Parent=MS.gene64855 |
chr5.3 | exon | 13638137 | 13638343 | 13638137 | ID=MS.gene64855.t1.exon1;Parent=MS.gene64855.t1 |
chr5.3 | CDS | 13638137 | 13638343 | 13638137 | ID=cds.MS.gene64855.t1;Parent=MS.gene64855.t1 |
chr5.3 | exon | 13642663 | 13644046 | 13642663 | ID=MS.gene64855.t1.exon2;Parent=MS.gene64855.t1 |
chr5.3 | CDS | 13642663 | 13644046 | 13642663 | ID=cds.MS.gene64855.t1;Parent=MS.gene64855.t1 |
chr5.3 | exon | 13644447 | 13644454 | 13644447 | ID=MS.gene64855.t1.exon3;Parent=MS.gene64855.t1 |
chr5.3 | CDS | 13644447 | 13644454 | 13644447 | ID=cds.MS.gene64855.t1;Parent=MS.gene64855.t1 |
Gene Sequence |
Protein sequence |