Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052467.t1 | AES62911.2 | 70.6 | 153 | 32 | 3 | 26 | 171 | 21 | 167 | 1.10E-52 | 217.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052467.t1 | P51850 | 73.8 | 126 | 15 | 2 | 177 | 284 | 405 | 530 | 1.1e-43 | 178.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052467.t1 | G7IDA5 | 70.6 | 153 | 32 | 3 | 26 | 171 | 21 | 167 | 8.0e-53 | 217.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052447 | MS.gene052467 | 0.806178 | 9.33E-50 | -1.69E-46 |
| MS.gene052467 | MS.gene065039 | 0.80638 | 8.46E-50 | -1.69E-46 |
| MS.gene052467 | MS.gene37027 | 0.809439 | 1.89E-50 | -1.69E-46 |
| MS.gene052467 | MS.gene49120 | 0.805989 | 1.02E-49 | -1.69E-46 |
| MS.gene052467 | MS.gene57498 | 0.803013 | 4.27E-49 | -1.69E-46 |
| MS.gene052467 | MS.gene66428 | 0.805915 | 1.06E-49 | -1.69E-46 |
| MS.gene052467 | MS.gene76755 | 0.812626 | 3.86E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052467.t1 | MTR_1g110670 | 70.588 | 153 | 32 | 3 | 26 | 171 | 21 | 167 | 1.08e-67 | 216 |
| MS.gene052467.t1 | MTR_5g056550 | 71.429 | 119 | 29 | 1 | 53 | 171 | 88 | 201 | 3.50e-56 | 184 |
| MS.gene052467.t1 | MTR_5g056550 | 71.429 | 119 | 29 | 1 | 53 | 171 | 88 | 201 | 3.90e-56 | 183 |
| MS.gene052467.t1 | MTR_5g056550 | 71.429 | 119 | 29 | 1 | 53 | 171 | 88 | 201 | 2.64e-55 | 184 |
| MS.gene052467.t1 | MTR_5g056550 | 71.429 | 119 | 29 | 1 | 53 | 171 | 88 | 201 | 3.94e-55 | 184 |
| MS.gene052467.t1 | MTR_2g015560 | 75.397 | 126 | 13 | 1 | 177 | 284 | 394 | 519 | 4.79e-52 | 181 |
| MS.gene052467.t1 | MTR_4g017200 | 65.873 | 126 | 25 | 1 | 177 | 284 | 419 | 544 | 2.12e-45 | 163 |
| MS.gene052467.t1 | MTR_5g046610 | 65.873 | 126 | 25 | 1 | 177 | 284 | 419 | 544 | 2.26e-45 | 163 |
| MS.gene052467.t1 | MTR_7g069500 | 64.286 | 126 | 27 | 1 | 177 | 284 | 387 | 512 | 1.09e-44 | 160 |
| MS.gene052467.t1 | MTR_7g069540 | 63.492 | 126 | 28 | 1 | 177 | 284 | 417 | 542 | 1.97e-44 | 160 |
| MS.gene052467.t1 | MTR_6g084420 | 58.621 | 116 | 46 | 2 | 55 | 170 | 33 | 146 | 2.97e-40 | 144 |
| MS.gene052467.t1 | MTR_6g018490 | 67.347 | 98 | 31 | 1 | 73 | 170 | 50 | 146 | 1.77e-39 | 142 |
| MS.gene052467.t1 | MTR_7g007260 | 66.667 | 99 | 32 | 1 | 73 | 171 | 51 | 148 | 3.84e-39 | 141 |
| MS.gene052467.t1 | MTR_6g025610 | 68.041 | 97 | 30 | 1 | 74 | 170 | 41 | 136 | 4.80e-39 | 141 |
| MS.gene052467.t1 | MTR_7g007260 | 66.327 | 98 | 32 | 1 | 73 | 170 | 51 | 147 | 1.75e-38 | 139 |
| MS.gene052467.t1 | MTR_7g007260 | 66.327 | 98 | 32 | 1 | 73 | 170 | 51 | 147 | 2.82e-38 | 139 |
| MS.gene052467.t1 | MTR_2g009330 | 53.968 | 126 | 40 | 3 | 177 | 284 | 424 | 549 | 4.33e-32 | 126 |
| MS.gene052467.t1 | MTR_1g088470 | 39.785 | 93 | 55 | 1 | 77 | 169 | 8 | 99 | 4.14e-16 | 78.2 |
| MS.gene052467.t1 | MTR_1g115535 | 33.333 | 105 | 69 | 1 | 65 | 169 | 2 | 105 | 9.57e-15 | 74.3 |
| MS.gene052467.t1 | MTR_1g115535 | 33.333 | 102 | 67 | 1 | 68 | 169 | 1 | 101 | 1.16e-14 | 73.9 |
| MS.gene052467.t1 | MTR_7g108770 | 34.021 | 97 | 62 | 1 | 77 | 173 | 8 | 102 | 4.94e-13 | 69.3 |
| MS.gene052467.t1 | MTR_4g089170 | 26.772 | 127 | 77 | 2 | 55 | 170 | 11 | 132 | 3.78e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052467.t1 | AT5G54960 | 64.286 | 126 | 27 | 1 | 177 | 284 | 419 | 544 | 1.02e-44 | 161 |
| MS.gene052467.t1 | AT1G77420 | 52.703 | 148 | 59 | 2 | 23 | 170 | 51 | 187 | 9.53e-44 | 154 |
| MS.gene052467.t1 | AT5G01320 | 63.492 | 126 | 28 | 1 | 177 | 284 | 415 | 540 | 5.76e-42 | 154 |
| MS.gene052467.t1 | AT5G01330 | 62.698 | 126 | 29 | 1 | 177 | 284 | 404 | 529 | 8.51e-42 | 153 |
| MS.gene052467.t1 | AT5G16120 | 59.524 | 126 | 42 | 3 | 49 | 171 | 30 | 149 | 1.43e-41 | 148 |
| MS.gene052467.t1 | AT5G16120 | 59.524 | 126 | 42 | 3 | 49 | 171 | 30 | 149 | 1.43e-41 | 148 |
| MS.gene052467.t1 | AT5G16120 | 59.524 | 126 | 42 | 3 | 49 | 171 | 48 | 167 | 1.92e-41 | 148 |
| MS.gene052467.t1 | AT5G16120 | 59.524 | 126 | 42 | 3 | 49 | 171 | 62 | 181 | 2.43e-41 | 148 |
| MS.gene052467.t1 | AT4G33070 | 62.698 | 126 | 29 | 1 | 177 | 284 | 419 | 544 | 2.45e-41 | 152 |
| MS.gene052467.t1 | AT2G39410 | 40.860 | 93 | 54 | 1 | 77 | 169 | 11 | 102 | 1.13e-18 | 80.9 |
| MS.gene052467.t1 | AT2G39400 | 42.708 | 96 | 54 | 1 | 74 | 169 | 2 | 96 | 1.13e-17 | 81.6 |
| MS.gene052467.t1 | AT3G55180 | 40.625 | 96 | 57 | 0 | 74 | 169 | 2 | 97 | 2.03e-17 | 82.0 |
| MS.gene052467.t1 | AT2G39410 | 40.860 | 93 | 54 | 1 | 77 | 169 | 11 | 102 | 2.33e-17 | 81.6 |
| MS.gene052467.t1 | AT2G39400 | 42.708 | 96 | 54 | 1 | 74 | 169 | 2 | 96 | 2.38e-17 | 81.6 |
| MS.gene052467.t1 | AT2G39420 | 39.785 | 93 | 55 | 1 | 77 | 169 | 11 | 102 | 3.31e-17 | 81.3 |
| MS.gene052467.t1 | AT2G47630 | 35.238 | 105 | 64 | 1 | 77 | 181 | 9 | 109 | 4.93e-15 | 75.5 |
| MS.gene052467.t1 | AT3G62860 | 35.789 | 95 | 59 | 1 | 77 | 171 | 9 | 101 | 4.09e-14 | 72.8 |
| MS.gene052467.t1 | AT1G11090 | 36.735 | 98 | 62 | 0 | 73 | 170 | 26 | 123 | 1.41e-13 | 70.9 |
| MS.gene052467.t1 | AT3G55190 | 36.458 | 96 | 60 | 1 | 77 | 172 | 11 | 105 | 4.39e-13 | 69.3 |
| MS.gene052467.t1 | AT5G11650 | 40.230 | 87 | 50 | 2 | 85 | 171 | 110 | 194 | 2.45e-11 | 63.9 |
| MS.gene052467.t1 | AT5G11650 | 40.230 | 87 | 50 | 2 | 85 | 171 | 110 | 194 | 3.26e-11 | 64.3 |
Find 72 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGCTATATCAAAGATTT+TGG | 0.197897 | 6.1:+75831681 | MS.gene052467:CDS |
| GCATTTCCCATTGTCCATTA+TGG | 0.200684 | 6.1:-75835137 | None:intergenic |
| TTCAATAAGATACAAATTTC+AGG | 0.222047 | 6.1:+75831536 | MS.gene052467:CDS |
| AGAATTGCTGCTTCTGGATT+TGG | 0.272433 | 6.1:+75832818 | MS.gene052467:CDS |
| GCAAGGAGAATTGCTGCTTC+TGG | 0.298556 | 6.1:+75832812 | MS.gene052467:CDS |
| CCATTCTAGCAACTCTTTGC+TGG | 0.311297 | 6.1:-75835398 | None:intergenic |
| ACTTGCACTTTCTTCTTTGA+AGG | 0.335129 | 6.1:+75832725 | MS.gene052467:CDS |
| CATACAATGTGATCAAGAAT+TGG | 0.342392 | 6.1:+75835088 | MS.gene052467:CDS |
| AGCAATTAAATGTGTTGAAC+AGG | 0.348122 | 6.1:+75834596 | MS.gene052467:intron |
| TTGATTGGAATGCCATGTTC+TGG | 0.355006 | 6.1:-75832668 | None:intergenic |
| GGAGCCAGGACCCTGGGGTA+AGG | 0.369687 | 6.1:-75831253 | None:intergenic |
| CAATTCTTGATCACATTGTA+TGG | 0.382941 | 6.1:-75835087 | None:intergenic |
| TTGCCTTGCCTGAGAATTGC+GGG | 0.391590 | 6.1:+75834690 | MS.gene052467:CDS |
| AACCCCTTACCCCAGGGTCC+TGG | 0.434155 | 6.1:+75831249 | MS.gene052467:CDS |
| GAGCCAGGACCCTGGGGTAA+GGG | 0.438450 | 6.1:-75831252 | None:intergenic |
| TGAAAGGAATTCAAGGGGAT+TGG | 0.438456 | 6.1:+75832622 | MS.gene052467:CDS |
| TAGCTGAAACCGGATATTCA+TGG | 0.462479 | 6.1:+75834646 | MS.gene052467:CDS |
| TGCCATCCATAATGGACAAT+GGG | 0.466610 | 6.1:+75835131 | MS.gene052467:CDS |
| ATACAATGTGATCAAGAATT+GGG | 0.467312 | 6.1:+75835089 | MS.gene052467:CDS |
| ATGACTTACCCGCAATTCTC+AGG | 0.469236 | 6.1:-75834698 | None:intergenic |
| CTTCATGCAGTGGCGGAGCC+AGG | 0.475272 | 6.1:-75831267 | None:intergenic |
| CCAGGTTTCGGTTTATCTGA+AGG | 0.476945 | 6.1:+75832860 | MS.gene052467:CDS |
| ACAGTTAAACCATGAATATC+CGG | 0.481487 | 6.1:-75834655 | None:intergenic |
| CTATAATAGACTGCACCTGC+TGG | 0.486422 | 6.1:+75832058 | MS.gene052467:intron |
| TATAACCTCCATTCTTAATG+AGG | 0.486796 | 6.1:-75835038 | None:intergenic |
| CAATTCTCAGGCAAGGCAAA+CGG | 0.489436 | 6.1:-75834686 | None:intergenic |
| TAATGGACAATGGGAAATGC+TGG | 0.495317 | 6.1:+75835140 | MS.gene052467:CDS |
| CAGTGGCGGAGCCAGGACCC+TGG | 0.499375 | 6.1:-75831260 | None:intergenic |
| TTTCAAAAGATTCTTCGCAT+TGG | 0.500919 | 6.1:+75831714 | MS.gene052467:CDS |
| AGTGGCGGAGCCAGGACCCT+GGG | 0.502080 | 6.1:-75831259 | None:intergenic |
| AGCCAGGACCCTGGGGTAAG+GGG | 0.502822 | 6.1:-75831251 | None:intergenic |
| TTGGTTATCAGTGGTATGAA+AGG | 0.504463 | 6.1:+75832606 | MS.gene052467:intron |
| CCTTCAGATAAACCGAAACC+TGG | 0.507779 | 6.1:-75832860 | None:intergenic |
| TTGACTAAATCATCAAAACT+TGG | 0.509820 | 6.1:-75832899 | None:intergenic |
| ATCATCTTCCTCATTAAGAA+TGG | 0.512412 | 6.1:+75835030 | MS.gene052467:CDS |
| TTCCCATTGTCCATTATGGA+TGG | 0.518485 | 6.1:-75835133 | None:intergenic |
| ACTGCTGTAATAGCTGAAAC+CGG | 0.519597 | 6.1:+75834636 | MS.gene052467:CDS |
| GAACATGGCATTCCAATCAA+AGG | 0.527421 | 6.1:+75832671 | MS.gene052467:CDS |
| TGGATTTGGTGTTTATGCAA+TGG | 0.528835 | 6.1:+75832832 | MS.gene052467:CDS |
| ATCAAGAATTGGGACTATAC+CGG | 0.529747 | 6.1:+75835099 | MS.gene052467:CDS |
| ATTGAAGTTGAGATTCATGA+TGG | 0.533621 | 6.1:+75835063 | MS.gene052467:CDS |
| TTTGTGAGTGCCATCCATAA+TGG | 0.536522 | 6.1:+75835123 | MS.gene052467:CDS |
| TTTGCCTTGCCTGAGAATTG+CGG | 0.538417 | 6.1:+75834689 | MS.gene052467:CDS |
| GAAGCAATTGCAACAACCAC+TGG | 0.539247 | 6.1:+75835324 | MS.gene052467:CDS |
| ATGATTGTTTAGGTATTGCA+AGG | 0.539789 | 6.1:+75832795 | MS.gene052467:intron |
| TCTTGAGTTATGATCCCAGC+AGG | 0.541950 | 6.1:-75832073 | None:intergenic |
| AGTGGTATGAAAGGAATTCA+AGG | 0.543776 | 6.1:+75832615 | MS.gene052467:intron |
| TGGTTGGTCAATAGGTGCAC+AGG | 0.551182 | 6.1:+75834793 | MS.gene052467:intron |
| AAATCTTTGATATAGCATCA+TGG | 0.559093 | 6.1:-75831678 | None:intergenic |
| AGCTCGAACCCCTTACCCCA+GGG | 0.561637 | 6.1:+75831243 | MS.gene052467:CDS |
| GGTTTATCTGAAGGATTGCA+TGG | 0.566199 | 6.1:+75832869 | MS.gene052467:CDS |
| CTGGCTCCGCCACTGCATGA+AGG | 0.570689 | 6.1:+75831268 | MS.gene052467:CDS |
| ATGGATGGCACTCACAAAGC+CGG | 0.572348 | 6.1:-75835118 | None:intergenic |
| GTGGTATGAAAGGAATTCAA+GGG | 0.572692 | 6.1:+75832616 | MS.gene052467:intron |
| AAGCTCGAACCCCTTACCCC+AGG | 0.574558 | 6.1:+75831242 | MS.gene052467:CDS |
| TAAGATACAAATTTCAGGTG+AGG | 0.575387 | 6.1:+75831541 | MS.gene052467:CDS |
| GTGATTGCATGCATTGGTGA+TGG | 0.579828 | 6.1:+75834833 | MS.gene052467:CDS |
| ATCTTCCTCATTAAGAATGG+AGG | 0.582206 | 6.1:+75835033 | MS.gene052467:CDS |
| TATAATAGACTGCACCTGCT+GGG | 0.586633 | 6.1:+75832059 | MS.gene052467:intron |
| AAAAGCTTGATGCCAGAACA+TGG | 0.597114 | 6.1:+75832656 | MS.gene052467:CDS |
| GTGCCATCCATAATGGACAA+TGG | 0.599941 | 6.1:+75835130 | MS.gene052467:CDS |
| TTAAATGTGTTGAACAGGAA+CGG | 0.610993 | 6.1:+75834601 | MS.gene052467:CDS |
| TGGGAAATGCTGGACTGCCA+AGG | 0.613099 | 6.1:+75835150 | MS.gene052467:CDS |
| TGAATCTTTCTCTGCACCAG+TGG | 0.613940 | 6.1:-75835340 | None:intergenic |
| GTTGAACAGGAACGGCTAAG+TGG | 0.620932 | 6.1:+75834609 | MS.gene052467:CDS |
| AAAATACCTTCATGCAGTGG+CGG | 0.633305 | 6.1:-75831274 | None:intergenic |
| TTACCCGCAATTCTCAGGCA+AGG | 0.640507 | 6.1:-75834693 | None:intergenic |
| AAGTGTGTGATTGCATGCAT+TGG | 0.648664 | 6.1:+75834827 | MS.gene052467:CDS |
| ACTACAAGCTTATGCATGCG+AGG | 0.666131 | 6.1:+75831513 | MS.gene052467:CDS |
| TGGTATGAAAGGAATTCAAG+GGG | 0.670152 | 6.1:+75832617 | MS.gene052467:CDS |
| GTGGCGGAGCCAGGACCCTG+GGG | 0.677802 | 6.1:-75831258 | None:intergenic |
| GTGAGTGTAGGTACGTACAG+AGG | 0.714290 | 6.1:+75835290 | MS.gene052467:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAATATTATAGTAATTTAA+CGG | - | chr6.1:75834558-75834577 | None:intergenic | 10.0% |
| !! | CCAAAAATAAATTAATAAAT+AGG | - | chr6.1:75834938-75834957 | None:intergenic | 10.0% |
| !! | TTTAAATTGAACATTATAAA+AGG | + | chr6.1:75834002-75834021 | MS.gene052467:intron | 10.0% |
| !!! | CCTATTTATTAATTTATTTT+TGG | + | chr6.1:75834935-75834954 | MS.gene052467:intron | 10.0% |
| !!! | TAATATTTTTTCAGTTTATT+TGG | - | chr6.1:75832438-75832457 | None:intergenic | 10.0% |
| !! | AATATTGTAAAATTTCCATT+TGG | + | chr6.1:75834570-75834589 | MS.gene052467:intron | 15.0% |
| !! | TCACATGATTTAAAAAAAAA+GGG | - | chr6.1:75834265-75834284 | None:intergenic | 15.0% |
| !!! | ATTAATTTGAATGATTGTTT+AGG | + | chr6.1:75832785-75832804 | MS.gene052467:intron | 15.0% |
| !!! | TGTATTTTGTAATTTTAAGT+TGG | + | chr6.1:75833549-75833568 | MS.gene052467:intron | 15.0% |
| !! | CTTTACTTAAAAATCAATGA+TGG | - | chr6.1:75833117-75833136 | None:intergenic | 20.0% |
| !! | GAATTCCATACAAAAATTAA+AGG | + | chr6.1:75832932-75832951 | MS.gene052467:CDS | 20.0% |
| !! | GTAATATCACCTAAAATAAA+AGG | - | chr6.1:75832963-75832982 | None:intergenic | 20.0% |
| !! | GTCACATGATTTAAAAAAAA+AGG | - | chr6.1:75834266-75834285 | None:intergenic | 20.0% |
| !! | TAAGTTGTTTATATCAAACA+AGG | + | chr6.1:75832344-75832363 | MS.gene052467:intron | 20.0% |
| !! | TTCAATAAGATACAAATTTC+AGG | + | chr6.1:75831536-75831555 | MS.gene052467:CDS | 20.0% |
| !!! | AAATGAAGGTTAGTTTAAAA+AGG | + | chr6.1:75833061-75833080 | MS.gene052467:intron | 20.0% |
| !!! | ATTTCAAGAGATTTTTTCTT+TGG | + | chr6.1:75831348-75831367 | MS.gene052467:intron | 20.0% |
| !!! | CATCATTGATTTTTAAGTAA+AGG | + | chr6.1:75833115-75833134 | MS.gene052467:intron | 20.0% |
| !!! | TCATACCTTTAATTTTTGTA+TGG | - | chr6.1:75832940-75832959 | None:intergenic | 20.0% |
| !!! | TCATTTTTACTATATGCTAA+AGG | + | chr6.1:75833609-75833628 | MS.gene052467:intron | 20.0% |
| !!! | TGATGTCTATACATTAATTT+TGG | + | chr6.1:75832587-75832606 | MS.gene052467:intron | 20.0% |
| ! | AAATCTTTGATATAGCATCA+TGG | - | chr6.1:75831681-75831700 | None:intergenic | 25.0% |
| ! | AATATGCAATATTGTTTGTG+TGG | + | chr6.1:75834529-75834548 | MS.gene052467:intron | 25.0% |
| ! | AATGTGCATTTCAATAATAG+GGG | - | chr6.1:75831824-75831843 | None:intergenic | 25.0% |
| ! | ACATTTAACACAAATAGACA+TGG | - | chr6.1:75831793-75831812 | None:intergenic | 25.0% |
| ! | AGAATTTGACAAACCTATAA+AGG | + | chr6.1:75833674-75833693 | MS.gene052467:intron | 25.0% |
| ! | ATACAATGTGATCAAGAATT+GGG | + | chr6.1:75835089-75835108 | MS.gene052467:CDS | 25.0% |
| ! | ATGAAACATTTCCCTATTTA+GGG | - | chr6.1:75832559-75832578 | None:intergenic | 25.0% |
| ! | ATTTATATTTGGACAGTCAA+TGG | + | chr6.1:75833503-75833522 | MS.gene052467:intron | 25.0% |
| ! | CAATGTGCATTTCAATAATA+GGG | - | chr6.1:75831825-75831844 | None:intergenic | 25.0% |
| ! | GTAAAAAACTACAAGGAAAA+TGG | + | chr6.1:75833035-75833054 | MS.gene052467:intron | 25.0% |
| ! | GTGTCACATGATTTAAAAAA+GGG | - | chr6.1:75834268-75834287 | None:intergenic | 25.0% |
| ! | GTTTCATTGTAATTGATCAA+AGG | + | chr6.1:75831598-75831617 | MS.gene052467:intron | 25.0% |
| ! | TAACATAAATCATGTAAGCA+AGG | - | chr6.1:75831877-75831896 | None:intergenic | 25.0% |
| ! | TAACGGGATAAATCTAAAAA+AGG | - | chr6.1:75834050-75834069 | None:intergenic | 25.0% |
| ! | TATTTGTGTTAAATGTCTCT+TGG | + | chr6.1:75831797-75831816 | MS.gene052467:intron | 25.0% |
| ! | TCTAACGTGATTTGATAAAT+AGG | + | chr6.1:75833843-75833862 | MS.gene052467:intron | 25.0% |
| ! | TGTCACATGATTTAAAAAAG+GGG | - | chr6.1:75834405-75834424 | None:intergenic | 25.0% |
| ! | TGTGTCACATGATTTAAAAA+AGG | - | chr6.1:75834269-75834288 | None:intergenic | 25.0% |
| ! | TTGACTAAATCATCAAAACT+TGG | - | chr6.1:75832902-75832921 | None:intergenic | 25.0% |
| ! | TTGTAGAGTTATCAAATTTG+AGG | + | chr6.1:75832755-75832774 | MS.gene052467:intron | 25.0% |
| ! | TTTAAGCTTCCTAAAAATCA+CGG | - | chr6.1:75833277-75833296 | None:intergenic | 25.0% |
| ! | TTTATATTTGGACAGTCAAT+GGG | + | chr6.1:75833504-75833523 | MS.gene052467:intron | 25.0% |
| !! | ACATCTTAAGATGTTTTCAT+AGG | + | chr6.1:75832463-75832482 | MS.gene052467:intron | 25.0% |
| !! | ATTTTAAGCCAAATAAACAC+AGG | + | chr6.1:75831947-75831966 | MS.gene052467:intron | 25.0% |
| !! | TGATGCTATATCAAAGATTT+TGG | + | chr6.1:75831681-75831700 | MS.gene052467:CDS | 25.0% |
| !! | TTTCTTTGTTTGTGTTTCAT+TGG | + | chr6.1:75832029-75832048 | MS.gene052467:intron | 25.0% |
| !!! | AACAACCTATAGATTGATTT+TGG | + | chr6.1:75833635-75833654 | MS.gene052467:intron | 25.0% |
| !!! | AAGCTTTATTTTCTTTTTCG+TGG | + | chr6.1:75831922-75831941 | MS.gene052467:intron | 25.0% |
| !!! | AAGGTATGACCTTTTATTTT+AGG | + | chr6.1:75832951-75832970 | MS.gene052467:intron | 25.0% |
| !!! | ACATTAATTTTGGTTATCAG+TGG | + | chr6.1:75832597-75832616 | MS.gene052467:intron | 25.0% |
| !!! | AGAGATTTTTTCTTTGGTTT+TGG | + | chr6.1:75831354-75831373 | MS.gene052467:intron | 25.0% |
| !!! | CAAATTCTTGTTATTCCTTT+AGG | - | chr6.1:75833662-75833681 | None:intergenic | 25.0% |
| !!! | GAGATTTTTTCTTTGGTTTT+GGG | + | chr6.1:75831355-75831374 | MS.gene052467:intron | 25.0% |
| !!! | GATTTGCTGCAATTTATATT+TGG | + | chr6.1:75833492-75833511 | MS.gene052467:intron | 25.0% |
| !!! | GCAACAAAAAGCATTTAAAA+AGG | - | chr6.1:75832113-75832132 | None:intergenic | 25.0% |
| !!! | GTTAGTCTTTTCAATCAAAT+TGG | + | chr6.1:75831436-75831455 | MS.gene052467:intron | 25.0% |
| !!! | TATATCAAAGATTTTGGAGA+AGG | + | chr6.1:75831687-75831706 | MS.gene052467:CDS | 25.0% |
| AAAAAAATACCTTCATGCAG+TGG | - | chr6.1:75831280-75831299 | None:intergenic | 30.0% | |
| AAAATGAAGTAACATTCGCT+TGG | + | chr6.1:75831896-75831915 | MS.gene052467:intron | 30.0% | |
| AACTGTGTCACATGATTTAA+CGG | - | chr6.1:75834067-75834086 | None:intergenic | 30.0% | |
| AAGGAAAATGGAGAAAATGA+AGG | + | chr6.1:75833047-75833066 | MS.gene052467:intron | 30.0% | |
| AATCCAAACATACCCTAAAT+AGG | + | chr6.1:75832544-75832563 | MS.gene052467:intron | 30.0% | |
| ACAGTTAAACCATGAATATC+CGG | - | chr6.1:75834658-75834677 | None:intergenic | 30.0% | |
| ACCATGTGTAAAAAACTACA+AGG | + | chr6.1:75833028-75833047 | MS.gene052467:intron | 30.0% | |
| ACGTTAGAGATGTAATCATA+GGG | - | chr6.1:75833831-75833850 | None:intergenic | 30.0% | |
| AGAAATGAACCAAAAGACAA+AGG | - | chr6.1:75831569-75831588 | None:intergenic | 30.0% | |
| AGAGTTATCAAATTTGAGGA+TGG | + | chr6.1:75832759-75832778 | MS.gene052467:intron | 30.0% | |
| AGCAATTAAATGTGTTGAAC+AGG | + | chr6.1:75834596-75834615 | MS.gene052467:intron | 30.0% | |
| AGCCAACCAAAACAAATATT+CGG | - | chr6.1:75833749-75833768 | None:intergenic | 30.0% | |
| AGTGGACATCAAAATTTCTT+AGG | - | chr6.1:75833704-75833723 | None:intergenic | 30.0% | |
| ATAAATTGATCCTGCAACAA+AGG | - | chr6.1:75831487-75831506 | None:intergenic | 30.0% | |
| ATAGATTGCAACAACGATTA+CGG | - | chr6.1:75832985-75833004 | None:intergenic | 30.0% | |
| ATCATCTTCCTCATTAAGAA+TGG | + | chr6.1:75835030-75835049 | MS.gene052467:CDS | 30.0% | |
| ATCCAAACATACCCTAAATA+GGG | + | chr6.1:75832545-75832564 | MS.gene052467:intron | 30.0% | |
| ATTGAAGTTGAGATTCATGA+TGG | + | chr6.1:75835063-75835082 | MS.gene052467:CDS | 30.0% | |
| CAAATTACAAACCAAAACAG+TGG | - | chr6.1:75835205-75835224 | None:intergenic | 30.0% | |
| CAATTCTTGATCACATTGTA+TGG | - | chr6.1:75835090-75835109 | None:intergenic | 30.0% | |
| CATACAATGTGATCAAGAAT+TGG | + | chr6.1:75835088-75835107 | MS.gene052467:CDS | 30.0% | |
| CATGAAACATTTCCCTATTT+AGG | - | chr6.1:75832560-75832579 | None:intergenic | 30.0% | |
| CATTTAATTGCTGAACCAAA+TGG | - | chr6.1:75834588-75834607 | None:intergenic | 30.0% | |
| CCAATGTGCATTTCAATAAT+AGG | - | chr6.1:75831826-75831845 | None:intergenic | 30.0% | |
| CCTATTATTGAAATGCACAT+TGG | + | chr6.1:75831823-75831842 | MS.gene052467:intron | 30.0% | |
| CTAGCAGCAAAATTAATTTC+TGG | - | chr6.1:75833408-75833427 | None:intergenic | 30.0% | |
| CTCTTGATATTACATCCTAT+TGG | - | chr6.1:75833906-75833925 | None:intergenic | 30.0% | |
| GATTGAAAAGACTAACAACA+TGG | - | chr6.1:75831432-75831451 | None:intergenic | 30.0% | |
| GGAAAAAGACAGAAAGTTAA+TGG | - | chr6.1:75831638-75831657 | None:intergenic | 30.0% | |
| GTCGATATAAATACATCGAA+AGG | - | chr6.1:75833453-75833472 | None:intergenic | 30.0% | |
| TAATGCTCTATGTATCTGTT+TGG | - | chr6.1:75833348-75833367 | None:intergenic | 30.0% | |
| TAGGACCAAAATCAATCTAT+AGG | - | chr6.1:75833643-75833662 | None:intergenic | 30.0% | |
| TATAACCTCCATTCTTAATG+AGG | - | chr6.1:75835041-75835060 | None:intergenic | 30.0% | |
| TGGAATTCATAACTGAAAGT+TGG | - | chr6.1:75834755-75834774 | None:intergenic | 30.0% | |
| TTAAATGTGTTGAACAGGAA+CGG | + | chr6.1:75834601-75834620 | MS.gene052467:CDS | 30.0% | |
| TTCATATGAATCCTTCAAAG+TGG | - | chr6.1:75833722-75833741 | None:intergenic | 30.0% | |
| TTCTTTAGTGTCTGTTTACA+TGG | + | chr6.1:75833782-75833801 | MS.gene052467:intron | 30.0% | |
| TTTAAAAAAAAAGGGCAACC+CGG | - | chr6.1:75834257-75834276 | None:intergenic | 30.0% | |
| TTTAGACTCCTGTGTTTATT+TGG | - | chr6.1:75831958-75831977 | None:intergenic | 30.0% | |
| TTTCAAAAGATTCTTCGCAT+TGG | + | chr6.1:75831714-75831733 | MS.gene052467:CDS | 30.0% | |
| TTTCTTAGGTCTACCTTTAT+AGG | - | chr6.1:75833690-75833709 | None:intergenic | 30.0% | |
| ! | AAGAGTCCGAATATTTGTTT+TGG | + | chr6.1:75833740-75833759 | MS.gene052467:intron | 30.0% |
| ! | AGCTGTTTCATAAGCTATTA+TGG | + | chr6.1:75832403-75832422 | MS.gene052467:intron | 30.0% |
| ! | AGTCTTTTCAATCAAATTGG+TGG | + | chr6.1:75831439-75831458 | MS.gene052467:intron | 30.0% |
| ! | ATGATTGTTTAGGTATTGCA+AGG | + | chr6.1:75832795-75832814 | MS.gene052467:intron | 30.0% |
| ! | GAGAAAGATTCACTGTTTTA+TGG | + | chr6.1:75835351-75835370 | MS.gene052467:CDS | 30.0% |
| ! | TAAGATACAAATTTCAGGTG+AGG | + | chr6.1:75831541-75831560 | MS.gene052467:CDS | 30.0% |
| ! | TTGCATGATGATGAGTATAT+TGG | + | chr6.1:75832129-75832148 | MS.gene052467:intron | 30.0% |
| !! | AAATTCACTTTTGTGAGTGT+AGG | + | chr6.1:75835278-75835297 | MS.gene052467:intron | 30.0% |
| !! | AATTTTGATGTCCACTTTGA+AGG | + | chr6.1:75833708-75833727 | MS.gene052467:intron | 30.0% |
| !! | AGTTGATTGTGAGTTGATTA+AGG | + | chr6.1:75834463-75834482 | MS.gene052467:intron | 30.0% |
| !! | ATTTTAACAATGATCCGTTG+TGG | + | chr6.1:75834997-75835016 | MS.gene052467:CDS | 30.0% |
| !! | GAAGGTTAGTTTAAAAAGGA+TGG | + | chr6.1:75833065-75833084 | MS.gene052467:intron | 30.0% |
| !! | GTATGTATGATGCCTTATTT+AGG | + | chr6.1:75834960-75834979 | MS.gene052467:intron | 30.0% |
| !! | TAGATTGATTTTGGTCCTAA+AGG | + | chr6.1:75833644-75833663 | MS.gene052467:intron | 30.0% |
| !! | TGCGAAGAATCTTTTGAAAA+TGG | - | chr6.1:75831713-75831732 | None:intergenic | 30.0% |
| !! | TTGTTTTTCTGTCATGGATA+TGG | + | chr6.1:75832698-75832717 | MS.gene052467:CDS | 30.0% |
| !!! | CACTGTTTTGGTTTGTAATT+TGG | + | chr6.1:75835203-75835222 | MS.gene052467:intron | 30.0% |
| !!! | TCCTTGTAGTTTTTTACACA+TGG | - | chr6.1:75833032-75833051 | None:intergenic | 30.0% |
| AAAATGAACAGAAGCTCAAG+AGG | - | chr6.1:75833596-75833615 | None:intergenic | 35.0% | |
| AAATCATGTGACACAGTTGA+GGG | + | chr6.1:75834069-75834088 | MS.gene052467:intron | 35.0% | |
| ACAGGAGTCTAAATATGACT+AGG | + | chr6.1:75831965-75831984 | MS.gene052467:intron | 35.0% | |
| ACTGTGTCACATGATTTAAC+GGG | - | chr6.1:75834066-75834085 | None:intergenic | 35.0% | |
| ACTTGCACTTTCTTCTTTGA+AGG | + | chr6.1:75832725-75832744 | MS.gene052467:CDS | 35.0% | |
| AGGAACATAACAGTTTCAGA+TGG | + | chr6.1:75834483-75834502 | MS.gene052467:intron | 35.0% | |
| AGTGGTATGAAAGGAATTCA+AGG | + | chr6.1:75832615-75832634 | MS.gene052467:intron | 35.0% | |
| ATCAAGAATTGGGACTATAC+CGG | + | chr6.1:75835099-75835118 | MS.gene052467:CDS | 35.0% | |
| ATCTTCCTCATTAAGAATGG+AGG | + | chr6.1:75835033-75835052 | MS.gene052467:CDS | 35.0% | |
| CACGTTAGAGATGTAATCAT+AGG | - | chr6.1:75833832-75833851 | None:intergenic | 35.0% | |
| CATCCTATTGGAAACAAAAC+TGG | - | chr6.1:75833894-75833913 | None:intergenic | 35.0% | |
| GATTAAGCATAAAACCTGCA+AGG | - | chr6.1:75831659-75831678 | None:intergenic | 35.0% | |
| GTGGTATGAAAGGAATTCAA+GGG | + | chr6.1:75832616-75832635 | MS.gene052467:intron | 35.0% | |
| GTTATCAAATTTGAGGATGG+AGG | + | chr6.1:75832762-75832781 | MS.gene052467:intron | 35.0% | |
| TAAATCATGTGACACAGTTG+AGG | + | chr6.1:75834068-75834087 | MS.gene052467:intron | 35.0% | |
| TAATAAATAGGCTTACCTGC+TGG | - | chr6.1:75834926-75834945 | None:intergenic | 35.0% | |
| TAATGTTAAGTTTCACCAGC+AGG | + | chr6.1:75834908-75834927 | MS.gene052467:intron | 35.0% | |
| TATGAATTCCAGATGCAGTA+TGG | + | chr6.1:75834764-75834783 | MS.gene052467:intron | 35.0% | |
| TATGTATCTGTTTGGTACAG+CGG | - | chr6.1:75833340-75833359 | None:intergenic | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr6.1:75834165-75834184 | MS.gene052467:intron | 35.0% | |
| TGATATACATAGAGCCTGTT+TGG | + | chr6.1:75833208-75833227 | MS.gene052467:intron | 35.0% | |
| TGGTATGAAAGGAATTCAAG+GGG | + | chr6.1:75832617-75832636 | MS.gene052467:CDS | 35.0% | |
| TGTAACTGTGAAGTTTGTGT+AGG | + | chr6.1:75831323-75831342 | MS.gene052467:intron | 35.0% | |
| TGTTTACATGGTAAGCTCAA+AGG | + | chr6.1:75833794-75833813 | MS.gene052467:intron | 35.0% | |
| TTGGTTATCAGTGGTATGAA+AGG | + | chr6.1:75832606-75832625 | MS.gene052467:intron | 35.0% | |
| ! | AAAAACAAAGCGCCTTTGAT+TGG | - | chr6.1:75832686-75832705 | None:intergenic | 35.0% |
| ! | TATGGAAGTTTTTGCACTCA+AGG | + | chr6.1:75835369-75835388 | MS.gene052467:CDS | 35.0% |
| ! | TGTTCATTTTGTGCTAACCT+TGG | - | chr6.1:75835170-75835189 | None:intergenic | 35.0% |
| ! | TTCCCTATTTAGGGTATGTT+TGG | - | chr6.1:75832550-75832569 | None:intergenic | 35.0% |
| ! | TTGAAATGCACATTGGTTGT+AGG | + | chr6.1:75831830-75831849 | MS.gene052467:intron | 35.0% |
| !! | ATGATGCCTTATTTAGGTGA+CGG | + | chr6.1:75834966-75834985 | MS.gene052467:intron | 35.0% |
| !! | GGTTAGTTTAAAAAGGATGG+AGG | + | chr6.1:75833068-75833087 | MS.gene052467:intron | 35.0% |
| !! | GTTTATGCAATGGATTTTCC+AGG | + | chr6.1:75832842-75832861 | MS.gene052467:CDS | 35.0% |
| !! | TGGATTTGGTGTTTATGCAA+TGG | + | chr6.1:75832832-75832851 | MS.gene052467:CDS | 35.0% |
| !! | TTTATCTTGTGCCACTGTTT+TGG | + | chr6.1:75835191-75835210 | MS.gene052467:intron | 35.0% |
| !!! | AAGCCAGTTTTGTTTCCAAT+AGG | + | chr6.1:75833888-75833907 | MS.gene052467:intron | 35.0% |
| !!! | GTCCGAATATTTGTTTTGGT+TGG | + | chr6.1:75833744-75833763 | MS.gene052467:intron | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr6.1:75834166-75834185 | None:intergenic | 35.0% |
| AAAAGCTTGATGCCAGAACA+TGG | + | chr6.1:75832656-75832675 | MS.gene052467:CDS | 40.0% | |
| AAAATACCTTCATGCAGTGG+CGG | - | chr6.1:75831277-75831296 | None:intergenic | 40.0% | |
| AAATCATGTGACACAGTTCC+TGG | + | chr6.1:75834274-75834293 | MS.gene052467:intron | 40.0% | |
| AAGCTTCCTAAAAATCACGG+TGG | - | chr6.1:75833274-75833293 | None:intergenic | 40.0% | |
| AAGTGTGTGATTGCATGCAT+TGG | + | chr6.1:75834827-75834846 | MS.gene052467:CDS | 40.0% | |
| AAGTGTTTGCGTTAGAACTC+GGG | - | chr6.1:75832266-75832285 | None:intergenic | 40.0% | |
| AATCATGTGACACAGTTGAG+GGG | + | chr6.1:75834070-75834089 | MS.gene052467:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | + | chr6.1:75834159-75834178 | MS.gene052467:intron | 40.0% | |
| ACTGCTGTAATAGCTGAAAC+CGG | + | chr6.1:75834636-75834655 | MS.gene052467:CDS | 40.0% | |
| AGCTTCCTAAAAATCACGGT+GGG | - | chr6.1:75833273-75833292 | None:intergenic | 40.0% | |
| ATAGAGCCTGTTTGGTATAG+TGG | + | chr6.1:75833216-75833235 | MS.gene052467:intron | 40.0% | |
| ATTGTGCCGTCACCTAAATA+AGG | - | chr6.1:75834975-75834994 | None:intergenic | 40.0% | |
| CAAGTGTTTGCGTTAGAACT+CGG | - | chr6.1:75832267-75832286 | None:intergenic | 40.0% | |
| CAATTGATCCATACTGCATC+TGG | - | chr6.1:75834775-75834794 | None:intergenic | 40.0% | |
| CAGATGCAGTATGGATCAAT+TGG | + | chr6.1:75834773-75834792 | MS.gene052467:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | + | chr6.1:75834160-75834179 | MS.gene052467:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr6.1:75834191-75834210 | MS.gene052467:intron | 40.0% | |
| GAACATGGCATTCCAATCAA+AGG | + | chr6.1:75832671-75832690 | MS.gene052467:CDS | 40.0% | |
| GATGAGTATATTGGCATGCT+TGG | + | chr6.1:75832138-75832157 | MS.gene052467:intron | 40.0% | |
| GATTTAAAAAAGGGGCAACC+CGG | - | chr6.1:75834397-75834416 | None:intergenic | 40.0% | |
| GCATTTCCCATTGTCCATTA+TGG | - | chr6.1:75835140-75835159 | None:intergenic | 40.0% | |
| GGTTTATCTGAAGGATTGCA+TGG | + | chr6.1:75832869-75832888 | MS.gene052467:CDS | 40.0% | |
| GTTGAGAGCAAAACAATGAG+AGG | - | chr6.1:75833979-75833998 | None:intergenic | 40.0% | |
| GTTGTTGTCATGTGACTGTA+AGG | + | chr6.1:75834115-75834134 | MS.gene052467:intron | 40.0% | |
| TAGCTGAAACCGGATATTCA+TGG | + | chr6.1:75834646-75834665 | MS.gene052467:CDS | 40.0% | |
| TATAATAGACTGCACCTGCT+GGG | + | chr6.1:75832059-75832078 | MS.gene052467:intron | 40.0% | |
| TGAAAGGAATTCAAGGGGAT+TGG | + | chr6.1:75832622-75832641 | MS.gene052467:CDS | 40.0% | |
| TGCAGTATGGATCAATTGGT+TGG | + | chr6.1:75834777-75834796 | MS.gene052467:intron | 40.0% | |
| TTCCCATTGTCCATTATGGA+TGG | - | chr6.1:75835136-75835155 | None:intergenic | 40.0% | |
| TTGATTGGAATGCCATGTTC+TGG | - | chr6.1:75832671-75832690 | None:intergenic | 40.0% | |
| TTTGTGAGTGCCATCCATAA+TGG | + | chr6.1:75835123-75835142 | MS.gene052467:CDS | 40.0% | |
| ! | AAAGGCAGCACTTGTTAGAT+TGG | - | chr6.1:75831469-75831488 | None:intergenic | 40.0% |
| ! | AGAATTGCTGCTTCTGGATT+TGG | + | chr6.1:75832818-75832837 | MS.gene052467:CDS | 40.0% |
| ! | CACATTGGTTGTAGGAGAAA+GGG | + | chr6.1:75831838-75831857 | MS.gene052467:intron | 40.0% |
| ! | CTTTCTGTCTTTTTCCTTGC+AGG | + | chr6.1:75831642-75831661 | MS.gene052467:intron | 40.0% |
| ! | GGATCAATTGGTTGGTCAAT+AGG | + | chr6.1:75834785-75834804 | MS.gene052467:intron | 40.0% |
| ! | TAATGGACAATGGGAAATGC+TGG | + | chr6.1:75835140-75835159 | MS.gene052467:CDS | 40.0% |
| ! | TGATGCTCTTTTGTCCACAA+CGG | - | chr6.1:75835014-75835033 | None:intergenic | 40.0% |
| ! | TGTAGCTTTTGCCAAAACGT+GGG | + | chr6.1:75833299-75833318 | MS.gene052467:intron | 40.0% |
| ! | TTGTAGCTTTTGCCAAAACG+TGG | + | chr6.1:75833298-75833317 | MS.gene052467:intron | 40.0% |
| !! | GAGGAGTGTGATTTTCTGAT+AGG | - | chr6.1:75833577-75833596 | None:intergenic | 40.0% |
| !! | GCAATGGATTTTCCAGGTTT+CGG | + | chr6.1:75832848-75832867 | MS.gene052467:CDS | 40.0% |
| !! | TGCCATCCATAATGGACAAT+GGG | + | chr6.1:75835131-75835150 | MS.gene052467:CDS | 40.0% |
| ACTACAAGCTTATGCATGCG+AGG | + | chr6.1:75831513-75831532 | MS.gene052467:CDS | 45.0% | |
| AGCCTGTTTGGTATAGTGGT+GGG | + | chr6.1:75833220-75833239 | MS.gene052467:intron | 45.0% | |
| ATGACTTACCCGCAATTCTC+AGG | - | chr6.1:75834701-75834720 | None:intergenic | 45.0% | |
| CAACTTTACCAGTTGCACCA+AGG | - | chr6.1:75834099-75834118 | None:intergenic | 45.0% | |
| CAATTCTCAGGCAAGGCAAA+CGG | - | chr6.1:75834689-75834708 | None:intergenic | 45.0% | |
| CCAGGTTTCGGTTTATCTGA+AGG | + | chr6.1:75832860-75832879 | MS.gene052467:CDS | 45.0% | |
| CCTTCAGATAAACCGAAACC+TGG | - | chr6.1:75832863-75832882 | None:intergenic | 45.0% | |
| CGAGCACTTGTGAGACTATT+TGG | - | chr6.1:75832494-75832513 | None:intergenic | 45.0% | |
| CTATAATAGACTGCACCTGC+TGG | + | chr6.1:75832058-75832077 | MS.gene052467:intron | 45.0% | |
| GAAGCAATTGCAACAACCAC+TGG | + | chr6.1:75835324-75835343 | MS.gene052467:CDS | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr6.1:75834190-75834209 | MS.gene052467:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr6.1:75834187-75834206 | MS.gene052467:intron | 45.0% | |
| TATATCGACAGCTAGACCAG+AGG | + | chr6.1:75833464-75833483 | MS.gene052467:intron | 45.0% | |
| TCATGTGACTGTAAGGTCAC+AGG | + | chr6.1:75834122-75834141 | MS.gene052467:intron | 45.0% | |
| TCTTGAGTTATGATCCCAGC+AGG | - | chr6.1:75832076-75832095 | None:intergenic | 45.0% | |
| TGAATCTTTCTCTGCACCAG+TGG | - | chr6.1:75835343-75835362 | None:intergenic | 45.0% | |
| TTTGCCTTGCCTGAGAATTG+CGG | + | chr6.1:75834689-75834708 | MS.gene052467:CDS | 45.0% | |
| ! | GCACATTGGTTGTAGGAGAA+AGG | + | chr6.1:75831837-75831856 | MS.gene052467:intron | 45.0% |
| ! | GCTAACCCACCGTGATTTTT+AGG | + | chr6.1:75833265-75833284 | MS.gene052467:intron | 45.0% |
| ! | GGTGAGGTTCCTTTGTCTTT+TGG | + | chr6.1:75831557-75831576 | MS.gene052467:intron | 45.0% |
| ! | GTGATTGCATGCATTGGTGA+TGG | + | chr6.1:75834833-75834852 | MS.gene052467:CDS | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr6.1:75834155-75834174 | None:intergenic | 45.0% |
| ! | TTTTGCCAAAACGTGGGTAC+AGG | + | chr6.1:75833305-75833324 | MS.gene052467:intron | 45.0% |
| !! | AAATCACGGTGGGTTAGCAT+TGG | - | chr6.1:75833263-75833282 | None:intergenic | 45.0% |
| !! | AATCACGGTGGGTTAGCATT+GGG | - | chr6.1:75833262-75833281 | None:intergenic | 45.0% |
| !! | GTGCCATCCATAATGGACAA+TGG | + | chr6.1:75835130-75835149 | MS.gene052467:CDS | 45.0% |
| !!! | GGCGCTTTGTTTTTCTGTCA+TGG | + | chr6.1:75832692-75832711 | MS.gene052467:CDS | 45.0% |
| !!! | TGGTTTTGGGTTCAGCAGTT+TGG | + | chr6.1:75831368-75831387 | MS.gene052467:intron | 45.0% |
| AAGGTCACAGGTTCAAGTCC+TGG | + | chr6.1:75834134-75834153 | MS.gene052467:intron | 50.0% | |
| ACACAGTTGAGGGGTAACCT+TGG | + | chr6.1:75834079-75834098 | MS.gene052467:intron | 50.0% | |
| ATGGATGGCACTCACAAAGC+CGG | - | chr6.1:75835121-75835140 | None:intergenic | 50.0% | |
| CTCCCACCACTATACCAAAC+AGG | - | chr6.1:75833225-75833244 | None:intergenic | 50.0% | |
| GACACCAGCAAAGAGTTGCT+AGG | + | chr6.1:75835394-75835413 | MS.gene052467:CDS | 50.0% | |
| GAGCCTGTTTGGTATAGTGG+TGG | + | chr6.1:75833219-75833238 | MS.gene052467:intron | 50.0% | |
| GTATCTGTTTGGTACAGCGG+TGG | - | chr6.1:75833337-75833356 | None:intergenic | 50.0% | |
| GTGAGTGTAGGTACGTACAG+AGG | + | chr6.1:75835290-75835309 | MS.gene052467:intron | 50.0% | |
| GTTGAACAGGAACGGCTAAG+TGG | + | chr6.1:75834609-75834628 | MS.gene052467:CDS | 50.0% | |
| TTACCCGCAATTCTCAGGCA+AGG | - | chr6.1:75834696-75834715 | None:intergenic | 50.0% | |
| TTGCCTTGCCTGAGAATTGC+GGG | + | chr6.1:75834690-75834709 | MS.gene052467:CDS | 50.0% | |
| ! | ACAAGTGCTGCCTTTGTTGC+AGG | + | chr6.1:75831474-75831493 | MS.gene052467:intron | 50.0% |
| ! | GCAAGGAGAATTGCTGCTTC+TGG | + | chr6.1:75832812-75832831 | MS.gene052467:CDS | 50.0% |
| ! | GGCAGCACTTGTTAGATTGG+TGG | - | chr6.1:75831466-75831485 | None:intergenic | 50.0% |
| ! | TGGTTGGTCAATAGGTGCAC+AGG | + | chr6.1:75834793-75834812 | MS.gene052467:intron | 50.0% |
| GACAGCTAGACCAGAGGTGA+GGG | + | chr6.1:75833470-75833489 | MS.gene052467:intron | 55.0% | |
| GTTTGGTACAGCGGTGGAAG+AGG | - | chr6.1:75833331-75833350 | None:intergenic | 55.0% | |
| TGCAGCAAATCCCTCACCTC+TGG | - | chr6.1:75833483-75833502 | None:intergenic | 55.0% | |
| TGGGAAATGCTGGACTGCCA+AGG | + | chr6.1:75835150-75835169 | MS.gene052467:CDS | 55.0% | |
| ! | AGAGGCCTGTACCCACGTTT+TGG | - | chr6.1:75833313-75833332 | None:intergenic | 55.0% |
| ! | AGGGGTAACCTTGGTGCAAC+TGG | + | chr6.1:75834088-75834107 | MS.gene052467:intron | 55.0% |
| !! | GGTGGGTTAGCATTGGGAAG+TGG | - | chr6.1:75833256-75833275 | None:intergenic | 55.0% |
| AAGCTCGAACCCCTTACCCC+AGG | + | chr6.1:75831242-75831261 | MS.gene052467:CDS | 60.0% | |
| ACTGAAGCTCCCGCATACGC+AGG | - | chr6.1:75834231-75834250 | None:intergenic | 60.0% | |
| AGCTCGAACCCCTTACCCCA+GGG | + | chr6.1:75831243-75831262 | MS.gene052467:CDS | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | + | chr6.1:75834235-75834254 | MS.gene052467:intron | 60.0% | |
| CATATGCAGCGTCCGGGAAG+GGG | - | chr6.1:75834358-75834377 | None:intergenic | 60.0% | |
| CGACAGCTAGACCAGAGGTG+AGG | + | chr6.1:75833469-75833488 | MS.gene052467:intron | 60.0% | |
| CTGAAGCTCCCGCATACGCA+GGG | - | chr6.1:75834230-75834249 | None:intergenic | 60.0% | |
| CTTCCCGGACGCTGCATATG+CGG | + | chr6.1:75834358-75834377 | MS.gene052467:intron | 60.0% | |
| GCATATGCAGCGTCCGGGAA+GGG | - | chr6.1:75834359-75834378 | None:intergenic | 60.0% | |
| TTCCCGGACGCTGCATATGC+GGG | + | chr6.1:75834359-75834378 | MS.gene052467:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr6.1:75834203-75834222 | MS.gene052467:intron | 60.0% |
| AACCCCTTACCCCAGGGTCC+TGG | + | chr6.1:75831249-75831268 | MS.gene052467:CDS | 65.0% | |
| AGCCAGGACCCTGGGGTAAG+GGG | - | chr6.1:75831254-75831273 | None:intergenic | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr6.1:75834218-75834237 | None:intergenic | 65.0% | |
| CGCATATGCAGCGTCCGGGA+AGG | - | chr6.1:75834360-75834379 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr6.1:75834205-75834224 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGCGTCC+GGG | - | chr6.1:75834364-75834383 | None:intergenic | 65.0% | |
| CTGGCTCCGCCACTGCATGA+AGG | + | chr6.1:75831268-75831287 | MS.gene052467:CDS | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | chr6.1:75834218-75834237 | MS.gene052467:intron | 65.0% | |
| GAGCCAGGACCCTGGGGTAA+GGG | - | chr6.1:75831255-75831274 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr6.1:75834219-75834238 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGCGTC+CGG | - | chr6.1:75834365-75834384 | None:intergenic | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | + | chr6.1:75834236-75834255 | MS.gene052467:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr6.1:75834219-75834238 | MS.gene052467:intron | 65.0% | |
| ! | CTTCATGCAGTGGCGGAGCC+AGG | - | chr6.1:75831270-75831289 | None:intergenic | 65.0% |
| CGCATACGCAGGGTCCGGGA+AGG | - | chr6.1:75834220-75834239 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr6.1:75834224-75834243 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr6.1:75834225-75834244 | None:intergenic | 70.0% | |
| GGAGCCAGGACCCTGGGGTA+AGG | - | chr6.1:75831256-75831275 | None:intergenic | 70.0% | |
| ! | AGTGGCGGAGCCAGGACCCT+GGG | - | chr6.1:75831262-75831281 | None:intergenic | 70.0% |
| ! | CAGTGGCGGAGCCAGGACCC+TGG | - | chr6.1:75831263-75831282 | None:intergenic | 75.0% |
| ! | GTGGCGGAGCCAGGACCCTG+GGG | - | chr6.1:75831261-75831280 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 75831232 | 75835415 | 75831232 | ID=MS.gene052467 |
| chr6.1 | mRNA | 75831232 | 75835415 | 75831232 | ID=MS.gene052467.t1;Parent=MS.gene052467 |
| chr6.1 | exon | 75831232 | 75831289 | 75831232 | ID=MS.gene052467.t1.exon1;Parent=MS.gene052467.t1 |
| chr6.1 | CDS | 75831232 | 75831289 | 75831232 | ID=cds.MS.gene052467.t1;Parent=MS.gene052467.t1 |
| chr6.1 | exon | 75831383 | 75831389 | 75831383 | ID=MS.gene052467.t1.exon2;Parent=MS.gene052467.t1 |
| chr6.1 | CDS | 75831383 | 75831389 | 75831383 | ID=cds.MS.gene052467.t1;Parent=MS.gene052467.t1 |
| chr6.1 | exon | 75831496 | 75831562 | 75831496 | ID=MS.gene052467.t1.exon3;Parent=MS.gene052467.t1 |
| chr6.1 | CDS | 75831496 | 75831562 | 75831496 | ID=cds.MS.gene052467.t1;Parent=MS.gene052467.t1 |
| chr6.1 | exon | 75831664 | 75831735 | 75831664 | ID=MS.gene052467.t1.exon4;Parent=MS.gene052467.t1 |
| chr6.1 | CDS | 75831664 | 75831735 | 75831664 | ID=cds.MS.gene052467.t1;Parent=MS.gene052467.t1 |
| chr6.1 | exon | 75832067 | 75832096 | 75832067 | ID=MS.gene052467.t1.exon5;Parent=MS.gene052467.t1 |
| chr6.1 | CDS | 75832067 | 75832096 | 75832067 | ID=cds.MS.gene052467.t1;Parent=MS.gene052467.t1 |
| chr6.1 | exon | 75832617 | 75832746 | 75832617 | ID=MS.gene052467.t1.exon6;Parent=MS.gene052467.t1 |
| chr6.1 | CDS | 75832617 | 75832746 | 75832617 | ID=cds.MS.gene052467.t1;Parent=MS.gene052467.t1 |
| chr6.1 | exon | 75832807 | 75832953 | 75832807 | ID=MS.gene052467.t1.exon7;Parent=MS.gene052467.t1 |
| chr6.1 | CDS | 75832807 | 75832953 | 75832807 | ID=cds.MS.gene052467.t1;Parent=MS.gene052467.t1 |
| chr6.1 | exon | 75834598 | 75834711 | 75834598 | ID=MS.gene052467.t1.exon8;Parent=MS.gene052467.t1 |
| chr6.1 | CDS | 75834598 | 75834711 | 75834598 | ID=cds.MS.gene052467.t1;Parent=MS.gene052467.t1 |
| chr6.1 | exon | 75834807 | 75834865 | 75834807 | ID=MS.gene052467.t1.exon9;Parent=MS.gene052467.t1 |
| chr6.1 | CDS | 75834807 | 75834865 | 75834807 | ID=cds.MS.gene052467.t1;Parent=MS.gene052467.t1 |
| chr6.1 | exon | 75834982 | 75835171 | 75834982 | ID=MS.gene052467.t1.exon10;Parent=MS.gene052467.t1 |
| chr6.1 | CDS | 75834982 | 75835171 | 75834982 | ID=cds.MS.gene052467.t1;Parent=MS.gene052467.t1 |
| chr6.1 | exon | 75835300 | 75835415 | 75835300 | ID=MS.gene052467.t1.exon11;Parent=MS.gene052467.t1 |
| chr6.1 | CDS | 75835300 | 75835415 | 75835300 | ID=cds.MS.gene052467.t1;Parent=MS.gene052467.t1 |
| Gene Sequence |
| Protein sequence |
