Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37027.t1 | AET01222.2 | 69.3 | 696 | 49 | 3 | 1 | 696 | 82 | 612 | 6.10E-253 | 883.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37027.t1 | Q38931 | 70.3 | 286 | 83 | 2 | 1 | 286 | 104 | 387 | 4.5e-111 | 403.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37027.t1 | G7LCH1 | 69.3 | 696 | 49 | 3 | 1 | 696 | 82 | 612 | 4.4e-253 | 883.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049254 | MS.gene37027 | 0.819708 | 1.01E-52 | -1.69E-46 |
MS.gene049343 | MS.gene37027 | 0.824756 | 6.79E-54 | -1.69E-46 |
MS.gene049666 | MS.gene37027 | 0.815931 | 7.18E-52 | -1.69E-46 |
MS.gene049824 | MS.gene37027 | 0.83747 | 5.10E-57 | -1.69E-46 |
MS.gene049825 | MS.gene37027 | 0.864379 | 1.27E-64 | -1.69E-46 |
MS.gene049873 | MS.gene37027 | 0.876067 | 1.87E-68 | -1.69E-46 |
MS.gene050026 | MS.gene37027 | 0.820176 | 7.88E-53 | -1.69E-46 |
MS.gene050355 | MS.gene37027 | 0.804349 | 2.25E-49 | -1.69E-46 |
MS.gene050799 | MS.gene37027 | 0.852889 | 3.43E-61 | -1.69E-46 |
MS.gene051744 | MS.gene37027 | 0.834846 | 2.37E-56 | -1.69E-46 |
MS.gene052467 | MS.gene37027 | 0.809439 | 1.89E-50 | -1.69E-46 |
MS.gene052519 | MS.gene37027 | 0.855544 | 5.88E-62 | -1.69E-46 |
MS.gene052582 | MS.gene37027 | 0.82195 | 3.07E-53 | -1.69E-46 |
MS.gene052584 | MS.gene37027 | 0.848762 | 4.98E-60 | -1.69E-46 |
MS.gene052717 | MS.gene37027 | 0.840622 | 7.78E-58 | -1.69E-46 |
MS.gene053122 | MS.gene37027 | 0.857064 | 2.11E-62 | -1.69E-46 |
MS.gene053145 | MS.gene37027 | 0.83053 | 2.79E-55 | -1.69E-46 |
MS.gene053195 | MS.gene37027 | 0.815155 | 1.07E-51 | -1.69E-46 |
MS.gene053226 | MS.gene37027 | 0.857674 | 1.39E-62 | -1.69E-46 |
MS.gene053294 | MS.gene37027 | 0.811995 | 5.30E-51 | -1.69E-46 |
MS.gene053492 | MS.gene37027 | 0.814021 | 1.90E-51 | -1.69E-46 |
MS.gene05365 | MS.gene37027 | 0.833919 | 4.04E-56 | -1.69E-46 |
MS.gene053883 | MS.gene37027 | 0.80403 | 2.63E-49 | -1.69E-46 |
MS.gene053900 | MS.gene37027 | 0.83988 | 1.22E-57 | -1.69E-46 |
MS.gene053995 | MS.gene37027 | 0.802501 | 5.44E-49 | -1.69E-46 |
MS.gene054651 | MS.gene37027 | 0.83866 | 2.52E-57 | -1.69E-46 |
MS.gene055374 | MS.gene37027 | 0.829292 | 5.58E-55 | -1.69E-46 |
MS.gene055555 | MS.gene37027 | 0.862272 | 5.70E-64 | -1.69E-46 |
MS.gene055580 | MS.gene37027 | -0.819906 | 9.08E-53 | -1.69E-46 |
MS.gene055586 | MS.gene37027 | 0.807361 | 5.25E-50 | -1.69E-46 |
MS.gene055589 | MS.gene37027 | 0.823616 | 1.26E-53 | -1.69E-46 |
MS.gene055694 | MS.gene37027 | 0.814759 | 1.31E-51 | -1.69E-46 |
MS.gene055778 | MS.gene37027 | 0.831198 | 1.91E-55 | -1.69E-46 |
MS.gene055808 | MS.gene37027 | 0.845764 | 3.31E-59 | -1.69E-46 |
MS.gene055818 | MS.gene37027 | 0.803357 | 3.62E-49 | -1.69E-46 |
MS.gene056091 | MS.gene37027 | 0.84108 | 5.90E-58 | -1.69E-46 |
MS.gene056170 | MS.gene37027 | 0.834044 | 3.76E-56 | -1.69E-46 |
MS.gene056215 | MS.gene37027 | 0.828876 | 7.05E-55 | -1.69E-46 |
MS.gene056366 | MS.gene37027 | 0.810451 | 1.15E-50 | -1.69E-46 |
MS.gene056595 | MS.gene37027 | 0.825002 | 5.94E-54 | -1.69E-46 |
MS.gene056642 | MS.gene37027 | 0.801843 | 7.44E-49 | -1.69E-46 |
MS.gene05689 | MS.gene37027 | 0.834733 | 2.53E-56 | -1.69E-46 |
MS.gene057102 | MS.gene37027 | 0.823566 | 1.29E-53 | -1.69E-46 |
MS.gene057598 | MS.gene37027 | 0.822843 | 1.91E-53 | -1.69E-46 |
MS.gene057705 | MS.gene37027 | 0.806084 | 9.77E-50 | -1.69E-46 |
MS.gene058008 | MS.gene37027 | 0.812417 | 4.28E-51 | -1.69E-46 |
MS.gene058009 | MS.gene37027 | 0.821836 | 3.27E-53 | -1.69E-46 |
MS.gene058037 | MS.gene37027 | 0.836643 | 8.30E-57 | -1.69E-46 |
MS.gene058625 | MS.gene37027 | 0.818383 | 2.02E-52 | -1.69E-46 |
MS.gene058783 | MS.gene37027 | 0.83339 | 5.48E-56 | -1.69E-46 |
MS.gene058974 | MS.gene37027 | 0.815787 | 7.73E-52 | -1.69E-46 |
MS.gene058979 | MS.gene37027 | 0.80548 | 1.31E-49 | -1.69E-46 |
MS.gene05954 | MS.gene37027 | 0.829847 | 4.09E-55 | -1.69E-46 |
MS.gene059625 | MS.gene37027 | 0.842267 | 2.87E-58 | -1.69E-46 |
MS.gene05985 | MS.gene37027 | -0.823212 | 1.56E-53 | -1.69E-46 |
MS.gene059935 | MS.gene37027 | 0.873028 | 2.02E-67 | -1.69E-46 |
MS.gene060429 | MS.gene37027 | 0.857543 | 1.52E-62 | -1.69E-46 |
MS.gene060521 | MS.gene37027 | 0.815417 | 9.34E-52 | -1.69E-46 |
MS.gene060572 | MS.gene37027 | 0.805424 | 1.34E-49 | -1.69E-46 |
MS.gene060917 | MS.gene37027 | 0.828439 | 8.98E-55 | -1.69E-46 |
MS.gene060935 | MS.gene37027 | 0.805204 | 1.49E-49 | -1.69E-46 |
MS.gene06094 | MS.gene37027 | 0.82614 | 3.19E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37027.t1 | MTR_8g008640 | 82.319 | 526 | 40 | 2 | 1 | 526 | 82 | 554 | 0.0 | 862 |
MS.gene37027.t1 | MTR_8g008640 | 68.932 | 103 | 18 | 3 | 637 | 725 | 553 | 655 | 5.79e-30 | 127 |
MS.gene37027.t1 | MTR_8g012340 | 80.769 | 286 | 54 | 1 | 1 | 286 | 105 | 389 | 3.77e-147 | 442 |
MS.gene37027.t1 | MTR_8g012340 | 36.771 | 223 | 123 | 5 | 65 | 281 | 52 | 262 | 5.49e-32 | 132 |
MS.gene37027.t1 | MTR_8g038785 | 75.862 | 290 | 60 | 3 | 1 | 287 | 237 | 519 | 3.46e-139 | 422 |
MS.gene37027.t1 | MTR_8g038785 | 33.937 | 221 | 123 | 6 | 72 | 281 | 189 | 397 | 2.49e-24 | 108 |
MS.gene37027.t1 | MTR_7g053470 | 72.727 | 286 | 75 | 3 | 1 | 286 | 99 | 381 | 1.44e-136 | 413 |
MS.gene37027.t1 | MTR_7g053470 | 34.599 | 237 | 137 | 5 | 51 | 281 | 32 | 256 | 3.94e-31 | 129 |
MS.gene37027.t1 | MTR_8g080980 | 65.385 | 286 | 96 | 2 | 1 | 286 | 103 | 385 | 3.17e-126 | 387 |
MS.gene37027.t1 | MTR_8g080980 | 34.118 | 255 | 149 | 6 | 53 | 300 | 38 | 280 | 1.35e-34 | 139 |
MS.gene37027.t1 | MTR_8g080980 | 35.000 | 140 | 85 | 2 | 173 | 312 | 41 | 174 | 5.99e-15 | 79.0 |
MS.gene37027.t1 | MTR_8g010620 | 63.281 | 256 | 87 | 4 | 35 | 286 | 7 | 259 | 2.03e-94 | 298 |
MS.gene37027.t1 | MTR_8g010620 | 34.078 | 179 | 101 | 5 | 1 | 167 | 89 | 262 | 1.30e-17 | 85.9 |
MS.gene37027.t1 | MTR_8g010620 | 63.281 | 256 | 87 | 4 | 35 | 286 | 43 | 295 | 2.40e-94 | 300 |
MS.gene37027.t1 | MTR_8g010620 | 34.078 | 179 | 101 | 5 | 1 | 167 | 125 | 298 | 1.40e-17 | 86.3 |
MS.gene37027.t1 | MTR_8g010620 | 57.651 | 281 | 87 | 5 | 35 | 286 | 43 | 320 | 9.01e-89 | 286 |
MS.gene37027.t1 | MTR_8g010620 | 34.078 | 179 | 101 | 5 | 1 | 167 | 150 | 323 | 2.01e-17 | 85.9 |
MS.gene37027.t1 | MTR_8g011100 | 60.630 | 254 | 73 | 5 | 37 | 286 | 76 | 306 | 4.54e-85 | 275 |
MS.gene37027.t1 | MTR_8g011100 | 33.333 | 171 | 95 | 6 | 1 | 167 | 154 | 309 | 4.45e-12 | 69.3 |
MS.gene37027.t1 | MTR_1g017870 | 48.421 | 285 | 137 | 4 | 1 | 283 | 104 | 380 | 4.09e-76 | 255 |
MS.gene37027.t1 | MTR_1g017870 | 34.764 | 233 | 129 | 7 | 56 | 281 | 42 | 258 | 7.09e-28 | 119 |
MS.gene37027.t1 | MTR_1g017870 | 48.421 | 285 | 137 | 4 | 1 | 283 | 104 | 380 | 8.01e-76 | 256 |
MS.gene37027.t1 | MTR_1g017870 | 34.764 | 233 | 129 | 7 | 56 | 281 | 42 | 258 | 9.89e-28 | 119 |
MS.gene37027.t1 | MTR_1g017870 | 48.070 | 285 | 138 | 4 | 1 | 283 | 80 | 356 | 1.09e-75 | 254 |
MS.gene37027.t1 | MTR_8g011140 | 49.462 | 279 | 94 | 9 | 14 | 286 | 12 | 249 | 3.49e-63 | 212 |
MS.gene37027.t1 | MTR_8g010620 | 59.278 | 194 | 75 | 2 | 94 | 286 | 2 | 192 | 1.40e-62 | 212 |
MS.gene37027.t1 | MTR_8g010620 | 34.078 | 179 | 101 | 5 | 1 | 167 | 22 | 195 | 4.87e-18 | 86.3 |
MS.gene37027.t1 | MTR_8g023740 | 64.516 | 155 | 49 | 3 | 74 | 227 | 7 | 156 | 1.42e-53 | 182 |
MS.gene37027.t1 | MTR_1g017870 | 47.143 | 210 | 107 | 2 | 76 | 283 | 47 | 254 | 2.73e-52 | 187 |
MS.gene37027.t1 | MTR_1g017870 | 29.167 | 168 | 108 | 3 | 1 | 159 | 87 | 252 | 9.70e-14 | 74.3 |
MS.gene37027.t1 | MTR_1g017870 | 47.143 | 210 | 107 | 2 | 76 | 283 | 47 | 254 | 6.67e-52 | 187 |
MS.gene37027.t1 | MTR_1g017870 | 29.167 | 168 | 108 | 3 | 1 | 159 | 87 | 252 | 1.17e-13 | 74.3 |
MS.gene37027.t1 | MTR_1g017870 | 49.708 | 171 | 84 | 1 | 113 | 283 | 2 | 170 | 1.92e-44 | 163 |
MS.gene37027.t1 | MTR_1g017870 | 29.167 | 168 | 108 | 3 | 1 | 159 | 3 | 168 | 4.72e-14 | 74.7 |
MS.gene37027.t1 | MTR_1g017870 | 49.708 | 171 | 84 | 1 | 113 | 283 | 2 | 170 | 3.62e-44 | 163 |
MS.gene37027.t1 | MTR_1g017870 | 29.167 | 168 | 108 | 3 | 1 | 159 | 3 | 168 | 7.03e-14 | 74.3 |
MS.gene37027.t1 | MTR_8g038775 | 52.027 | 148 | 58 | 3 | 493 | 637 | 5 | 142 | 4.70e-36 | 133 |
MS.gene37027.t1 | MTR_8g011560 | 67.677 | 99 | 29 | 1 | 191 | 286 | 26 | 124 | 1.51e-34 | 132 |
MS.gene37027.t1 | MTR_8g012360 | 45.000 | 180 | 45 | 4 | 1 | 150 | 1 | 156 | 1.76e-34 | 132 |
MS.gene37027.t1 | MTR_8g038765 | 50.993 | 151 | 61 | 4 | 583 | 724 | 1 | 147 | 1.43e-30 | 124 |
MS.gene37027.t1 | MTR_8g008643 | 73.267 | 101 | 22 | 3 | 617 | 712 | 72 | 172 | 3.94e-30 | 117 |
MS.gene37027.t1 | MTR_4g055500 | 26.394 | 269 | 170 | 5 | 23 | 283 | 15 | 263 | 1.19e-18 | 90.9 |
MS.gene37027.t1 | MTR_4g055500 | 25.581 | 301 | 184 | 7 | 1 | 281 | 104 | 384 | 2.19e-18 | 90.1 |
MS.gene37027.t1 | MTR_8g011580 | 41.935 | 124 | 43 | 2 | 164 | 286 | 74 | 169 | 2.15e-16 | 80.9 |
MS.gene37027.t1 | MTR_8g011580 | 38.000 | 150 | 66 | 5 | 19 | 167 | 49 | 172 | 8.32e-16 | 79.3 |
MS.gene37027.t1 | MTR_8g012350 | 61.818 | 55 | 21 | 0 | 219 | 273 | 18 | 72 | 2.48e-15 | 71.6 |
MS.gene37027.t1 | MTR_8g089030 | 25.837 | 209 | 139 | 4 | 429 | 637 | 249 | 441 | 2.32e-14 | 77.4 |
MS.gene37027.t1 | MTR_8g089030 | 25.837 | 209 | 139 | 4 | 429 | 637 | 249 | 441 | 3.27e-14 | 77.0 |
MS.gene37027.t1 | MTR_8g011110 | 81.579 | 38 | 7 | 0 | 246 | 283 | 21 | 58 | 1.19e-12 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37027.t1 | AT3G25230 | 70.280 | 286 | 83 | 2 | 1 | 286 | 104 | 387 | 4.02e-133 | 405 |
MS.gene37027.t1 | AT3G25230 | 37.021 | 235 | 130 | 5 | 53 | 281 | 39 | 261 | 3.36e-34 | 138 |
MS.gene37027.t1 | AT3G25230 | 70.280 | 286 | 83 | 2 | 1 | 286 | 104 | 387 | 5.78e-133 | 405 |
MS.gene37027.t1 | AT3G25230 | 37.021 | 235 | 130 | 5 | 53 | 281 | 39 | 261 | 3.10e-34 | 138 |
MS.gene37027.t1 | AT5G48570 | 70.139 | 288 | 82 | 4 | 1 | 286 | 112 | 397 | 5.31e-132 | 403 |
MS.gene37027.t1 | AT5G48570 | 36.538 | 260 | 137 | 8 | 53 | 300 | 47 | 290 | 1.26e-38 | 152 |
MS.gene37027.t1 | AT3G54010 | 25.685 | 292 | 195 | 7 | 1 | 281 | 12 | 292 | 1.09e-16 | 84.3 |
MS.gene37027.t1 | AT3G54010 | 30.337 | 178 | 114 | 4 | 106 | 283 | 4 | 171 | 8.04e-13 | 72.0 |
MS.gene37027.t1 | AT3G54010 | 27.917 | 240 | 155 | 5 | 52 | 283 | 32 | 261 | 2.29e-16 | 83.6 |
MS.gene37027.t1 | AT3G54010 | 25.685 | 292 | 195 | 7 | 1 | 281 | 102 | 382 | 2.70e-16 | 83.6 |
Find 143 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCTAGAGGCACACTTGTT+TGG | 0.221159 | 8.2:+79511867 | None:intergenic |
GCCTACTTGAAGTAGATTAT+TGG | 0.235795 | 8.2:+79513114 | None:intergenic |
CCTTTCATTGACTTACAAAA+TGG | 0.254823 | 8.2:-79512700 | MS.gene37027:CDS |
TTGTCACCGCATATTTCTTT+AGG | 0.262483 | 8.2:-79512092 | MS.gene37027:intron |
TTTACATCAGCTCCATCTTT+TGG | 0.280437 | 8.2:+79513965 | None:intergenic |
TTCTAGAGGCACACTTGTTT+GGG | 0.288264 | 8.2:+79511868 | None:intergenic |
TTGACTATTGCACCTAAGTA+TGG | 0.295366 | 8.2:-79513585 | MS.gene37027:CDS |
TAAAACTTGAGTTAATTTCT+TGG | 0.306863 | 8.2:-79514063 | MS.gene37027:CDS |
ATGATGTTGAGCTACTTTCT+TGG | 0.309089 | 8.2:-79514700 | MS.gene37027:CDS |
ATCACCATCAGCTGGCTTGC+CGG | 0.314544 | 8.2:+79514120 | None:intergenic |
TTAGTTGGGCTGAACATTTA+AGG | 0.323355 | 8.2:+79511715 | None:intergenic |
ATTGCACCTAAGTATGGTTT+TGG | 0.326379 | 8.2:-79513579 | MS.gene37027:CDS |
GCATTAGGAGGAATATGTTT+TGG | 0.327638 | 8.2:+79514734 | None:intergenic |
AGTGCCATCTTTAAGCTTAC+AGG | 0.331921 | 8.2:+79513833 | None:intergenic |
TAATGTAAGGTTGAATTTGC+AGG | 0.335084 | 8.2:+79513522 | None:intergenic |
AAGGATCTTGACGAAGTTCT+AGG | 0.338401 | 8.2:-79514599 | MS.gene37027:intron |
TTCCAAATCAAATTATTAGT+TGG | 0.354074 | 8.2:+79511700 | None:intergenic |
ATCTGAGTCTCGGCAGGAAT+TGG | 0.359941 | 8.2:-79513553 | MS.gene37027:CDS |
TCCAAATCAAATTATTAGTT+GGG | 0.366969 | 8.2:+79511701 | None:intergenic |
AAATTCAACCTTACATTATG+AGG | 0.380710 | 8.2:-79513517 | MS.gene37027:CDS |
AAATTCAGGTGCAAGCGATT+AGG | 0.389351 | 8.2:-79512835 | MS.gene37027:intron |
TGTGCCACTGCCTTTAGATC+TGG | 0.391153 | 8.2:+79511916 | None:intergenic |
AGAACTTCGTCAAGATCCTT+GGG | 0.393521 | 8.2:+79514602 | None:intergenic |
TCATATTGCAGAGTTGCATT+AGG | 0.397770 | 8.2:+79514719 | None:intergenic |
TTGTGCGACTTACTCTTAGA+TGG | 0.398720 | 8.2:-79511971 | MS.gene37027:CDS |
ATCTCTAATATTGCATTAGC+TGG | 0.406995 | 8.2:+79514085 | None:intergenic |
TCAAACACTGCGGTGGGGTG+GGG | 0.413461 | 8.2:-79512943 | MS.gene37027:CDS |
GAGTTAGCTTACGGTGCATC+TGG | 0.417291 | 8.2:-79514764 | MS.gene37027:CDS |
AATTGATAGCTTCACTTTGT+GGG | 0.421844 | 8.2:+79513356 | None:intergenic |
ATCAAACACTGCGGTGGGGT+GGG | 0.422691 | 8.2:-79512944 | MS.gene37027:CDS |
AAGGCAGTGGCACAAGTAAA+GGG | 0.428638 | 8.2:-79511907 | MS.gene37027:CDS |
ATGGTGGGTTTCAGCTGAAA+AGG | 0.430839 | 8.2:-79512248 | MS.gene37027:CDS |
GAATTGATAGCTTCACTTTG+TGG | 0.431581 | 8.2:+79513355 | None:intergenic |
TAGAACTTCGTCAAGATCCT+TGG | 0.437907 | 8.2:+79514601 | None:intergenic |
TGCTATGCGGTTGGAGGGCA+AGG | 0.441748 | 8.2:-79513182 | MS.gene37027:CDS |
TATTGTGTAATAGATGGATT+CGG | 0.448405 | 8.2:-79514148 | MS.gene37027:intron |
CTCAGGTGGAATGGTGAAAA+GGG | 0.451099 | 8.2:+79514784 | None:intergenic |
AAAGGCAGTGGCACAAGTAA+AGG | 0.454978 | 8.2:-79511908 | MS.gene37027:CDS |
AAAGTGAAGCTATCAATTCC+AGG | 0.461706 | 8.2:-79513351 | MS.gene37027:CDS |
TGTAAGTCAATGAAAGGAAA+GGG | 0.467913 | 8.2:+79512706 | None:intergenic |
AGTAGCAAAGTCTGATAAAG+TGG | 0.468341 | 8.2:-79514454 | MS.gene37027:CDS |
ACAATGTTCTAAATTTATGA+AGG | 0.470273 | 8.2:-79512643 | MS.gene37027:CDS |
AGCTGTAATGAGTATGAAGA+AGG | 0.471234 | 8.2:-79513622 | MS.gene37027:CDS |
GATCAAACACTGCGGTGGGG+TGG | 0.471687 | 8.2:-79512945 | MS.gene37027:CDS |
ACGAAGAGTCTTACGAAACT+TGG | 0.472179 | 8.2:+79513449 | None:intergenic |
GAGCTCTAGGCTATCAGAAT+CGG | 0.473961 | 8.2:+79512161 | None:intergenic |
TGCAGGTTAATTCATATCCC+TGG | 0.475657 | 8.2:+79512310 | None:intergenic |
TATGAAGCGCGTCTTGATGA+TGG | 0.477063 | 8.2:-79514483 | MS.gene37027:CDS |
AGTTAGTATCATTCATAAAG+AGG | 0.480272 | 8.2:-79513491 | MS.gene37027:CDS |
TCAGAATCGGCCTTTCCAAC+CGG | 0.481314 | 8.2:+79512174 | None:intergenic |
AGCAGAATCATACTTCAAAC+AGG | 0.482633 | 8.2:+79512197 | None:intergenic |
TAGTGTGGAGGATATATGTA+AGG | 0.483756 | 8.2:-79514675 | MS.gene37027:CDS |
TTTAAAGAGATACTTAAGAA+GGG | 0.484915 | 8.2:-79514641 | MS.gene37027:CDS |
ACTCAGGTGGAATGGTGAAA+AGG | 0.488523 | 8.2:+79514783 | None:intergenic |
AACAAGTGTGCCTCTAGAAG+AGG | 0.492155 | 8.2:-79511864 | MS.gene37027:CDS |
TAACTCAACCTCATAATGTA+AGG | 0.492274 | 8.2:+79513509 | None:intergenic |
GGCTGTTAGAACTATGAAGA+AGG | 0.495009 | 8.2:-79514297 | MS.gene37027:CDS |
TGAGCAGCGCAAGTGATTAG+AGG | 0.495598 | 8.2:-79513654 | MS.gene37027:intron |
TTAAAGAGATACTTAAGAAG+GGG | 0.506830 | 8.2:-79514640 | MS.gene37027:CDS |
AGACGAGGCAGAGATTATAG+TGG | 0.507993 | 8.2:-79511798 | MS.gene37027:CDS |
GTTTAAAGAGATACTTAAGA+AGG | 0.508683 | 8.2:-79514642 | MS.gene37027:CDS |
GCTACTTTCTTGGATTAGTG+TGG | 0.509423 | 8.2:-79514690 | MS.gene37027:CDS |
GTGTACTTTCCAATGACAAT+GGG | 0.512302 | 8.2:+79513315 | None:intergenic |
TTACAAAATGGAAATGTTTG+AGG | 0.513846 | 8.2:-79512688 | MS.gene37027:CDS |
GGATACAAACGTCCAAAAGA+TGG | 0.515267 | 8.2:-79513977 | MS.gene37027:CDS |
TGGTTCATCTGAGTCTCGGC+AGG | 0.516137 | 8.2:-79513559 | MS.gene37027:CDS |
CTGACCTGTAAGCTTAAAGA+TGG | 0.520411 | 8.2:-79513837 | MS.gene37027:CDS |
ATTCCACCTGAGTTAGCTTA+CGG | 0.523205 | 8.2:-79514773 | MS.gene37027:CDS |
ATAGATGGATTCGGTGAGAC+CGG | 0.524595 | 8.2:-79514139 | MS.gene37027:intron |
GAAGCTTAAAATCGAGCTCT+AGG | 0.525943 | 8.2:+79512148 | None:intergenic |
GATGAACCAAAACCATACTT+AGG | 0.526036 | 8.2:+79513573 | None:intergenic |
TGAAGTAACTGAGGACAAGA+TGG | 0.529349 | 8.2:-79514029 | MS.gene37027:CDS |
AATGAGTATGAAGAAGGGTG+AGG | 0.533366 | 8.2:-79513616 | MS.gene37027:CDS |
GCAATTAAATGCTATGCGGT+TGG | 0.538169 | 8.2:-79513191 | MS.gene37027:CDS |
ACAAGATCAAACACTGCGGT+GGG | 0.539303 | 8.2:-79512949 | MS.gene37027:CDS |
ATTAAATGCTATGCGGTTGG+AGG | 0.539710 | 8.2:-79513188 | MS.gene37027:CDS |
TGGTGGGTTTCAGCTGAAAA+GGG | 0.542880 | 8.2:-79512247 | MS.gene37027:CDS |
TTGTAAGTCAATGAAAGGAA+AGG | 0.548554 | 8.2:+79512705 | None:intergenic |
GCTGTAATGAGTATGAAGAA+GGG | 0.548847 | 8.2:-79513621 | MS.gene37027:CDS |
GTTGGAGGGCAAGGATGCCA+TGG | 0.549283 | 8.2:-79513173 | MS.gene37027:CDS |
GTCTCGGCAGGAATTGGCAG+TGG | 0.555493 | 8.2:-79513547 | MS.gene37027:CDS |
ACAAGTGTGCCTCTAGAAGA+GGG | 0.555647 | 8.2:-79511863 | MS.gene37027:CDS |
TAAAGAGATACTTAAGAAGG+GGG | 0.557587 | 8.2:-79514639 | MS.gene37027:CDS |
TATTGCAGAGTTGCATTAGG+AGG | 0.559247 | 8.2:+79514722 | None:intergenic |
ACATGGGCCGAAAACTGTAA+TGG | 0.559534 | 8.2:-79511822 | MS.gene37027:CDS |
TGCGAATGTGTCACGTATGA+TGG | 0.560651 | 8.2:-79512273 | MS.gene37027:CDS |
TAGAACTATGAAGAAGGGAG+AGG | 0.561771 | 8.2:-79514291 | MS.gene37027:CDS |
GTGGAGGATATATGTAAGGA+TGG | 0.563225 | 8.2:-79514671 | MS.gene37027:CDS |
ACTTTCTTGGATTAGTGTGG+AGG | 0.565290 | 8.2:-79514687 | MS.gene37027:CDS |
TTTGAAGTATGATTCTGCTC+CGG | 0.568365 | 8.2:-79512193 | MS.gene37027:CDS |
GACTGTAGTGAAAGAAGAGC+TGG | 0.569222 | 8.2:-79511762 | MS.gene37027:CDS |
GTAAGCTAACTCAGGTGGAA+TGG | 0.570045 | 8.2:+79514775 | None:intergenic |
ACAATAGTTCTCGCTGGTCA+AGG | 0.570760 | 8.2:-79512590 | MS.gene37027:intron |
TGATTCTGCTCCGGTTGGAA+AGG | 0.570959 | 8.2:-79512184 | MS.gene37027:CDS |
GAGCAGCGCAAGTGATTAGA+GGG | 0.573710 | 8.2:-79513653 | MS.gene37027:intron |
AAGTATGATTCTGCTCCGGT+TGG | 0.574917 | 8.2:-79512189 | MS.gene37027:CDS |
AAAGAGATACTTAAGAAGGG+GGG | 0.579256 | 8.2:-79514638 | MS.gene37027:CDS |
GTCACGTATGATGGTGATGG+TGG | 0.581082 | 8.2:-79512264 | MS.gene37027:CDS |
GAGACCGGCAAGCCAGCTGA+TGG | 0.585795 | 8.2:-79514124 | MS.gene37027:CDS |
AGAGATTATAGTGGAAGATG+AGG | 0.586082 | 8.2:-79511789 | MS.gene37027:CDS |
TCCAATAATCTACTTCAAGT+AGG | 0.587583 | 8.2:-79513115 | MS.gene37027:CDS |
GCTGTTAGAACTATGAAGAA+GGG | 0.592887 | 8.2:-79514296 | MS.gene37027:CDS |
TGTGTACTTTCCAATGACAA+TGG | 0.594788 | 8.2:+79513314 | None:intergenic |
AAGGCCAGATCTAAAGGCAG+TGG | 0.595229 | 8.2:-79511920 | MS.gene37027:CDS |
TTAAATGCTATGCGGTTGGA+GGG | 0.596647 | 8.2:-79513187 | MS.gene37027:CDS |
GCTCTGCTTCATCTCCGCCA+TGG | 0.596981 | 8.2:+79513793 | None:intergenic |
TTCGTGATGCAGTGAGAGAG+TGG | 0.598771 | 8.2:-79513431 | MS.gene37027:CDS |
GACAAGATCAAACACTGCGG+TGG | 0.602279 | 8.2:-79512950 | MS.gene37027:CDS |
TAAGTCAATGAAAGGAAAGG+GGG | 0.603681 | 8.2:+79512708 | None:intergenic |
TGATCAACAATAGTTCTCGC+TGG | 0.607129 | 8.2:-79512596 | MS.gene37027:CDS |
AAGAGATACTTAAGAAGGGG+GGG | 0.607788 | 8.2:-79514637 | MS.gene37027:CDS |
GTAAGTCAATGAAAGGAAAG+GGG | 0.608927 | 8.2:+79512707 | None:intergenic |
GAACACAATGTAGAGACACA+TGG | 0.609771 | 8.2:-79511839 | MS.gene37027:CDS |
AAGATTGTGAAGGAAGGTGA+AGG | 0.613450 | 8.2:-79513998 | MS.gene37027:CDS |
AGTATCATTCATAAAGAGGA+CGG | 0.619850 | 8.2:-79513487 | MS.gene37027:CDS |
CTAACAGCCATTGACAATGC+AGG | 0.627352 | 8.2:+79514311 | None:intergenic |
TCACTTTGTGGGTATCGATG+TGG | 0.628195 | 8.2:+79513367 | None:intergenic |
GTTTGAATTCACAACAGACG+AGG | 0.632600 | 8.2:-79513769 | MS.gene37027:CDS |
AAGTGTGCCTCTAGAAGAGG+GGG | 0.632715 | 8.2:-79511861 | MS.gene37027:CDS |
GCACCGTAAGCTAACTCAGG+TGG | 0.633539 | 8.2:+79514770 | None:intergenic |
GAACTTCGTCAAGATCCTTG+GGG | 0.643363 | 8.2:+79514603 | None:intergenic |
GGGGAAATGGGAAAACCCCA+AGG | 0.646147 | 8.2:-79514618 | MS.gene37027:CDS |
AGGCAGTGGCACAAGTAAAG+GGG | 0.649162 | 8.2:-79511906 | MS.gene37027:CDS |
AAGTCAATGAAAGGAAAGGG+GGG | 0.649736 | 8.2:+79512709 | None:intergenic |
TCACGTATGATGGTGATGGT+GGG | 0.653156 | 8.2:-79512263 | MS.gene37027:CDS |
TGTGTCACGTATGATGGTGA+TGG | 0.656537 | 8.2:-79512267 | MS.gene37027:CDS |
TAAAGTGGAGTTCACAGTGA+AGG | 0.658633 | 8.2:-79514439 | MS.gene37027:CDS |
CAAGTGTGCCTCTAGAAGAG+GGG | 0.664743 | 8.2:-79511862 | MS.gene37027:CDS |
GATGCACCGTAAGCTAACTC+AGG | 0.666265 | 8.2:+79514767 | None:intergenic |
GTGGAGTTCACAGTGAAGGA+CGG | 0.666408 | 8.2:-79514435 | MS.gene37027:intron |
AACACAATGTAGAGACACAT+GGG | 0.667328 | 8.2:-79511838 | MS.gene37027:CDS |
TTGTCATTGGAAAGTACACA+TGG | 0.671862 | 8.2:-79513311 | MS.gene37027:intron |
TGATGTAATTAACAAGACGT+TGG | 0.674269 | 8.2:-79512424 | MS.gene37027:CDS |
CAAGATCAAACACTGCGGTG+GGG | 0.676481 | 8.2:-79512948 | MS.gene37027:CDS |
TTTGAATTCACAACAGACGA+GGG | 0.679151 | 8.2:-79513768 | MS.gene37027:intron |
GAGGATATATGTAAGGATGG+CGG | 0.681749 | 8.2:-79514668 | MS.gene37027:CDS |
GATGCATATGACTGTAGTGA+GGG | 0.684895 | 8.2:+79513053 | None:intergenic |
AATAATCTACTTCAAGTAGG+CGG | 0.691614 | 8.2:-79513112 | MS.gene37027:CDS |
GAAAACTGTAATGGAAGACG+AGG | 0.704418 | 8.2:-79511813 | MS.gene37027:CDS |
ATCATTCATAAAGAGGACGG+AGG | 0.715633 | 8.2:-79513484 | MS.gene37027:CDS |
ACAGGCAATTAAATGCTATG+CGG | 0.717518 | 8.2:-79513195 | MS.gene37027:intron |
TGATGCATATGACTGTAGTG+AGG | 0.734024 | 8.2:+79513052 | None:intergenic |
GCAGACAAGATCAAACACTG+CGG | 0.841747 | 8.2:-79512953 | MS.gene37027:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAGTATAAAAACAAATTAAT+AGG | + | chr8.2:79512817-79512836 | None:intergenic | 10.0% |
!!! | TAATAGTATTTTATTTGAAT+CGG | - | chr8.2:79513541-79513560 | MS.gene37027:CDS | 10.0% |
!!! | TTTTTCACAAAATAAAATAA+AGG | + | chr8.2:79514475-79514494 | None:intergenic | 10.0% |
!! | AAAAAGAGTTAATATATCAA+CGG | + | chr8.2:79512349-79512368 | None:intergenic | 15.0% |
!! | ATATATGATTTACTTAATCT+GGG | - | chr8.2:79514496-79514515 | MS.gene37027:intron | 15.0% |
!! | GATTCAAATAAAATACTATT+AGG | + | chr8.2:79513542-79513561 | None:intergenic | 15.0% |
!! | TATATATGATTTACTTAATC+TGG | - | chr8.2:79514495-79514514 | MS.gene37027:intron | 15.0% |
!!! | AATTTTTCCATATATACTAT+GGG | - | chr8.2:79513373-79513392 | MS.gene37027:CDS | 15.0% |
!!! | TAATTTTTCCATATATACTA+TGG | - | chr8.2:79513372-79513391 | MS.gene37027:CDS | 15.0% |
!!! | TTTTTTTATTGTGTAATAGA+TGG | - | chr8.2:79512364-79512383 | MS.gene37027:CDS | 15.0% |
!! | ATAAAAATGCATATTCAAGT+GGG | - | chr8.2:79513620-79513639 | MS.gene37027:CDS | 20.0% |
!! | ATGTAAATTACCATTGATAA+TGG | - | chr8.2:79512576-79512595 | MS.gene37027:intron | 20.0% |
!! | ATTATCTTAAATTGTTGCAT+TGG | - | chr8.2:79512781-79512800 | MS.gene37027:intron | 20.0% |
!! | TAAAACTTGAGTTAATTTCT+TGG | - | chr8.2:79512455-79512474 | MS.gene37027:CDS | 20.0% |
!! | TATGTTTCGTTTCAAAAAAA+TGG | + | chr8.2:79513603-79513622 | None:intergenic | 20.0% |
!! | TTTAAAGAGATACTTAAGAA+GGG | - | chr8.2:79511877-79511896 | MS.gene37027:CDS | 20.0% |
!!! | ACAATGTTCTAAATTTATGA+AGG | - | chr8.2:79513875-79513894 | MS.gene37027:intron | 20.0% |
!!! | ACTTTTTATAGAGACAATAA+AGG | - | chr8.2:79514122-79514141 | MS.gene37027:CDS | 20.0% |
!!! | ATTTTACCTAAAGAAATATG+CGG | + | chr8.2:79514435-79514454 | None:intergenic | 20.0% |
!!! | ATTTTAGATATGATTTACCA+GGG | - | chr8.2:79514191-79514210 | MS.gene37027:intron | 20.0% |
!!! | ATTTTTCCATATATACTATG+GGG | - | chr8.2:79513374-79513393 | MS.gene37027:CDS | 20.0% |
!!! | GAATTTTTAGTTAAAGTGTT+TGG | - | chr8.2:79513238-79513257 | MS.gene37027:intron | 20.0% |
!!! | TCAATTGATATTTCTATTAC+AGG | - | chr8.2:79513305-79513324 | MS.gene37027:intron | 20.0% |
!!! | TTTTGTCAATTTTGAAATTC+AGG | - | chr8.2:79513669-79513688 | MS.gene37027:intron | 20.0% |
! | AAATTCAACCTTACATTATG+AGG | - | chr8.2:79513001-79513020 | MS.gene37027:intron | 25.0% |
! | AGTTAGTATCATTCATAAAG+AGG | - | chr8.2:79513027-79513046 | MS.gene37027:intron | 25.0% |
! | CATAAAAATGCATATTCAAG+TGG | - | chr8.2:79513619-79513638 | MS.gene37027:CDS | 25.0% |
! | GGTATTTCAACATTTCATAA+TGG | - | chr8.2:79513704-79513723 | MS.gene37027:intron | 25.0% |
! | GTTTAAAGAGATACTTAAGA+AGG | - | chr8.2:79511876-79511895 | MS.gene37027:CDS | 25.0% |
! | TAAAAATGCATATTCAAGTG+GGG | - | chr8.2:79513621-79513640 | MS.gene37027:CDS | 25.0% |
! | TATGGAAAAATTAAGATCCA+TGG | + | chr8.2:79513365-79513384 | None:intergenic | 25.0% |
! | TTAAAGAGATACTTAAGAAG+GGG | - | chr8.2:79511878-79511897 | MS.gene37027:CDS | 25.0% |
! | TTAAGCTTCAGGAAAAAATT+GGG | - | chr8.2:79514384-79514403 | MS.gene37027:intron | 25.0% |
! | TTACAAAATGGAAATGTTTG+AGG | - | chr8.2:79513830-79513849 | MS.gene37027:CDS | 25.0% |
! | TTTAAGCTTCAGGAAAAAAT+TGG | - | chr8.2:79514383-79514402 | MS.gene37027:intron | 25.0% |
!! | GATTTTAGATATGATTTACC+AGG | - | chr8.2:79514190-79514209 | MS.gene37027:intron | 25.0% |
!! | TATTGTGTAATAGATGGATT+CGG | - | chr8.2:79512370-79512389 | MS.gene37027:CDS | 25.0% |
!! | TTTTTCCATATATACTATGG+GGG | - | chr8.2:79513375-79513394 | MS.gene37027:CDS | 25.0% |
AAACACACCTAAGAAAAAGA+AGG | - | chr8.2:79514579-79514598 | MS.gene37027:intron | 30.0% | |
AAGAAAAGAGCCATTATCAA+TGG | + | chr8.2:79512589-79512608 | None:intergenic | 30.0% | |
AAGTTCTTTACACAACACTT+TGG | - | chr8.2:79512279-79512298 | MS.gene37027:CDS | 30.0% | |
AATAATCTACTTCAAGTAGG+CGG | - | chr8.2:79513406-79513425 | MS.gene37027:CDS | 30.0% | |
AGTATCATTCATAAAGAGGA+CGG | - | chr8.2:79513031-79513050 | MS.gene37027:intron | 30.0% | |
AGTTCTTTACACAACACTTT+GGG | - | chr8.2:79512280-79512299 | MS.gene37027:CDS | 30.0% | |
ATCAAAAAGATTGTGAAGGA+AGG | - | chr8.2:79512514-79512533 | MS.gene37027:intron | 30.0% | |
ATCATAAATATATCAGTGCC+TGG | + | chr8.2:79513997-79514016 | None:intergenic | 30.0% | |
ATCTCTAATATTGCATTAGC+TGG | + | chr8.2:79512436-79512455 | None:intergenic | 30.0% | |
CACTCAAAAAAAGAAGAAGA+TGG | - | chr8.2:79514149-79514168 | MS.gene37027:intron | 30.0% | |
GGTTATCAAAAAGATTGTGA+AGG | - | chr8.2:79512510-79512529 | MS.gene37027:intron | 30.0% | |
TAAAGAGATACTTAAGAAGG+GGG | - | chr8.2:79511879-79511898 | MS.gene37027:CDS | 30.0% | |
TAACTCAACCTCATAATGTA+AGG | + | chr8.2:79513012-79513031 | None:intergenic | 30.0% | |
TAATGTAAGGTTGAATTTGC+AGG | + | chr8.2:79512999-79513018 | None:intergenic | 30.0% | |
TAGAGTCACTCAATGAAAAA+TGG | + | chr8.2:79511966-79511985 | None:intergenic | 30.0% | |
TCAAAAAAAGAAGAAGATGG+TGG | - | chr8.2:79514152-79514171 | MS.gene37027:intron | 30.0% | |
TCCAATAATCTACTTCAAGT+AGG | - | chr8.2:79513403-79513422 | MS.gene37027:CDS | 30.0% | |
TGATGTAATTAACAAGACGT+TGG | - | chr8.2:79514094-79514113 | MS.gene37027:CDS | 30.0% | |
TGTAAGTCAATGAAAGGAAA+GGG | + | chr8.2:79513815-79513834 | None:intergenic | 30.0% | |
TGTGTAAAGAACTTACATAG+AGG | + | chr8.2:79512273-79512292 | None:intergenic | 30.0% | |
TTGTAAGTCAATGAAAGGAA+AGG | + | chr8.2:79513816-79513835 | None:intergenic | 30.0% | |
! | AATTGATAGCTTCACTTTGT+GGG | + | chr8.2:79513165-79513184 | None:intergenic | 30.0% |
! | AGTCATATGCATCATTTTGA+TGG | - | chr8.2:79513475-79513494 | MS.gene37027:CDS | 30.0% |
! | AGTGCGAACAAATTTTATCA+TGG | - | chr8.2:79512108-79512127 | MS.gene37027:CDS | 30.0% |
! | CAGTTTATGTGATCTTTTGA+AGG | - | chr8.2:79514025-79514044 | MS.gene37027:CDS | 30.0% |
! | CCATTTTGTAAGTCAATGAA+AGG | + | chr8.2:79513821-79513840 | None:intergenic | 30.0% |
! | TCTGGGTTTTTCTTGATTTT+TGG | - | chr8.2:79514513-79514532 | MS.gene37027:intron | 30.0% |
! | TTTTCCATATATACTATGGG+GGG | - | chr8.2:79513376-79513395 | MS.gene37027:CDS | 30.0% |
!! | ATATGCATCATTTTGATGGT+AGG | - | chr8.2:79513479-79513498 | MS.gene37027:CDS | 30.0% |
!! | CCTTTCATTGACTTACAAAA+TGG | - | chr8.2:79513818-79513837 | MS.gene37027:CDS | 30.0% |
!!! | ATTGTTTTTGATCAACAGCT+CGG | - | chr8.2:79513779-79513798 | MS.gene37027:CDS | 30.0% |
AAAAAGAAGGCCAGATCTAA+AGG | - | chr8.2:79514592-79514611 | MS.gene37027:intron | 35.0% | |
AAAGAGATACTTAAGAAGGG+GGG | - | chr8.2:79511880-79511899 | MS.gene37027:CDS | 35.0% | |
AAAGTGAAGCTATCAATTCC+AGG | - | chr8.2:79513167-79513186 | MS.gene37027:CDS | 35.0% | |
AACACAATGTAGAGACACAT+GGG | - | chr8.2:79514680-79514699 | MS.gene37027:CDS | 35.0% | |
AATTCACTGCAACAACAGAA+AGG | + | chr8.2:79512016-79512035 | None:intergenic | 35.0% | |
ACAGGCAATTAAATGCTATG+CGG | - | chr8.2:79513323-79513342 | MS.gene37027:CDS | 35.0% | |
AGCAGAATCATACTTCAAAC+AGG | + | chr8.2:79514324-79514343 | None:intergenic | 35.0% | |
AGCTGTAATGAGTATGAAGA+AGG | - | chr8.2:79512896-79512915 | MS.gene37027:CDS | 35.0% | |
AGTAGCAAAGTCTGATAAAG+TGG | - | chr8.2:79512064-79512083 | MS.gene37027:intron | 35.0% | |
ATTTCCCCCCATAGTATATA+TGG | + | chr8.2:79513383-79513402 | None:intergenic | 35.0% | |
GATGAACCAAAACCATACTT+AGG | + | chr8.2:79512948-79512967 | None:intergenic | 35.0% | |
GCCTACTTGAAGTAGATTAT+TGG | + | chr8.2:79513407-79513426 | None:intergenic | 35.0% | |
GCTGTAATGAGTATGAAGAA+GGG | - | chr8.2:79512897-79512916 | MS.gene37027:CDS | 35.0% | |
GCTGTTAGAACTATGAAGAA+GGG | - | chr8.2:79512222-79512241 | MS.gene37027:CDS | 35.0% | |
GTAAGTCAATGAAAGGAAAG+GGG | + | chr8.2:79513814-79513833 | None:intergenic | 35.0% | |
GTGTACTTTCCAATGACAAT+GGG | + | chr8.2:79513206-79513225 | None:intergenic | 35.0% | |
TAAGTCAATGAAAGGAAAGG+GGG | + | chr8.2:79513813-79513832 | None:intergenic | 35.0% | |
TAGTGTGGAGGATATATGTA+AGG | - | chr8.2:79511843-79511862 | MS.gene37027:CDS | 35.0% | |
TATAATGTTCACCATGAGAC+AGG | - | chr8.2:79512174-79512193 | MS.gene37027:CDS | 35.0% | |
TCATATTGCAGAGTTGCATT+AGG | + | chr8.2:79511802-79511821 | None:intergenic | 35.0% | |
TGTGTACTTTCCAATGACAA+TGG | + | chr8.2:79513207-79513226 | None:intergenic | 35.0% | |
TTAGTTGGGCTGAACATTTA+AGG | + | chr8.2:79514806-79514825 | None:intergenic | 35.0% | |
TTGACTATTGCACCTAAGTA+TGG | - | chr8.2:79512933-79512952 | MS.gene37027:CDS | 35.0% | |
TTGTCACCGCATATTTCTTT+AGG | - | chr8.2:79514426-79514445 | MS.gene37027:intron | 35.0% | |
TTTGAATTCACAACAGACGA+GGG | - | chr8.2:79512750-79512769 | MS.gene37027:intron | 35.0% | |
! | AGAGATTATAGTGGAAGATG+AGG | - | chr8.2:79514729-79514748 | MS.gene37027:CDS | 35.0% |
! | ATGATGTTGAGCTACTTTCT+TGG | - | chr8.2:79511818-79511837 | MS.gene37027:CDS | 35.0% |
! | ATGGGAAAACATTCTTTTCC+TGG | + | chr8.2:79513188-79513207 | None:intergenic | 35.0% |
! | ATTGCACCTAAGTATGGTTT+TGG | - | chr8.2:79512939-79512958 | MS.gene37027:CDS | 35.0% |
! | ATTGGAAAGTACACATGGTA+TGG | - | chr8.2:79513212-79513231 | MS.gene37027:intron | 35.0% |
! | CAGCTTTTACTGAAAAGCTT+TGG | + | chr8.2:79514076-79514095 | None:intergenic | 35.0% |
! | GAATGTTTTCCCATTGTCAT+TGG | - | chr8.2:79513194-79513213 | MS.gene37027:CDS | 35.0% |
! | GAATTGATAGCTTCACTTTG+TGG | + | chr8.2:79513166-79513185 | None:intergenic | 35.0% |
! | GCATTAGGAGGAATATGTTT+TGG | + | chr8.2:79511787-79511806 | None:intergenic | 35.0% |
! | GCATTTCTTCTTCTTTTTGC+AGG | + | chr8.2:79514228-79514247 | None:intergenic | 35.0% |
! | TCAGCTGAAAAGGGATTTTT+CGG | - | chr8.2:79514280-79514299 | MS.gene37027:CDS | 35.0% |
! | TCGTCTTCCATTACAGTTTT+CGG | + | chr8.2:79514706-79514725 | None:intergenic | 35.0% |
! | TCTTTGTTCTTTTCGCTCTT+AGG | + | chr8.2:79513125-79513144 | None:intergenic | 35.0% |
! | TTGTCATTGGAAAGTACACA+TGG | - | chr8.2:79513207-79513226 | MS.gene37027:intron | 35.0% |
! | TTTACATCAGCTCCATCTTT+TGG | + | chr8.2:79512556-79512575 | None:intergenic | 35.0% |
! | TTTGAAGTATGATTCTGCTC+CGG | - | chr8.2:79514325-79514344 | MS.gene37027:CDS | 35.0% |
! | TTTTTGTCCTGCATTGTCAA+TGG | - | chr8.2:79512200-79512219 | MS.gene37027:CDS | 35.0% |
!! | TTAGGAGGAATATGTTTTGG+AGG | + | chr8.2:79511784-79511803 | None:intergenic | 35.0% |
!!! | GACTGTTTTTGAAGTAACTG+AGG | - | chr8.2:79512480-79512499 | MS.gene37027:CDS | 35.0% |
AAATTCAGGTGCAAGCGATT+AGG | - | chr8.2:79513683-79513702 | MS.gene37027:intron | 40.0% | |
AAGAGATACTTAAGAAGGGG+GGG | - | chr8.2:79511881-79511900 | MS.gene37027:CDS | 40.0% | |
AAGATTGTGAAGGAAGGTGA+AGG | - | chr8.2:79512520-79512539 | MS.gene37027:intron | 40.0% | |
AAGGATCTTGACGAAGTTCT+AGG | - | chr8.2:79511919-79511938 | MS.gene37027:CDS | 40.0% | |
AAGTCAATGAAAGGAAAGGG+GGG | + | chr8.2:79513812-79513831 | None:intergenic | 40.0% | |
AATATATCAGTGCCTGGTTC+AGG | + | chr8.2:79513991-79514010 | None:intergenic | 40.0% | |
AATGAGTATGAAGAAGGGTG+AGG | - | chr8.2:79512902-79512921 | MS.gene37027:CDS | 40.0% | |
ACGAAGAGTCTTACGAAACT+TGG | + | chr8.2:79513072-79513091 | None:intergenic | 40.0% | |
AGAACTTCGTCAAGATCCTT+GGG | + | chr8.2:79511919-79511938 | None:intergenic | 40.0% | |
AGTGCCATCTTTAAGCTTAC+AGG | + | chr8.2:79512688-79512707 | None:intergenic | 40.0% | |
ATCATTCATAAAGAGGACGG+AGG | - | chr8.2:79513034-79513053 | MS.gene37027:intron | 40.0% | |
ATTAAATGCTATGCGGTTGG+AGG | - | chr8.2:79513330-79513349 | MS.gene37027:CDS | 40.0% | |
CAACAGACATTCACTTTCGT+TGG | + | chr8.2:79512841-79512860 | None:intergenic | 40.0% | |
CACGTTTCTCTATGCTATGA+AGG | - | chr8.2:79512317-79512336 | MS.gene37027:CDS | 40.0% | |
CTGACCTGTAAGCTTAAAGA+TGG | - | chr8.2:79512681-79512700 | MS.gene37027:CDS | 40.0% | |
GAACACAATGTAGAGACACA+TGG | - | chr8.2:79514679-79514698 | MS.gene37027:CDS | 40.0% | |
GAAGCTTAAAATCGAGCTCT+AGG | + | chr8.2:79514373-79514392 | None:intergenic | 40.0% | |
GACAAAAATGACCTGTCTCA+TGG | + | chr8.2:79512188-79512207 | None:intergenic | 40.0% | |
GAGGATATATGTAAGGATGG+CGG | - | chr8.2:79511850-79511869 | MS.gene37027:CDS | 40.0% | |
GATGCATATGACTGTAGTGA+GGG | + | chr8.2:79513468-79513487 | None:intergenic | 40.0% | |
GCAATTAAATGCTATGCGGT+TGG | - | chr8.2:79513327-79513346 | MS.gene37027:CDS | 40.0% | |
GGATACAAACGTCCAAAAGA+TGG | - | chr8.2:79512541-79512560 | MS.gene37027:intron | 40.0% | |
GGCTGTTAGAACTATGAAGA+AGG | - | chr8.2:79512221-79512240 | MS.gene37027:CDS | 40.0% | |
GTGGAGGATATATGTAAGGA+TGG | - | chr8.2:79511847-79511866 | MS.gene37027:CDS | 40.0% | |
GTTTGAATTCACAACAGACG+AGG | - | chr8.2:79512749-79512768 | MS.gene37027:intron | 40.0% | |
TAAAGTGGAGTTCACAGTGA+AGG | - | chr8.2:79512079-79512098 | MS.gene37027:intron | 40.0% | |
TAGAACTATGAAGAAGGGAG+AGG | - | chr8.2:79512227-79512246 | MS.gene37027:CDS | 40.0% | |
TAGAACTTCGTCAAGATCCT+TGG | + | chr8.2:79511920-79511939 | None:intergenic | 40.0% | |
TATTGCAGAGTTGCATTAGG+AGG | + | chr8.2:79511799-79511818 | None:intergenic | 40.0% | |
TGAAGTAACTGAGGACAAGA+TGG | - | chr8.2:79512489-79512508 | MS.gene37027:CDS | 40.0% | |
TGATCAACAATAGTTCTCGC+TGG | - | chr8.2:79513922-79513941 | MS.gene37027:intron | 40.0% | |
TGATGCATATGACTGTAGTG+AGG | + | chr8.2:79513469-79513488 | None:intergenic | 40.0% | |
TGCAGGTTAATTCATATCCC+TGG | + | chr8.2:79514211-79514230 | None:intergenic | 40.0% | |
TTAAATGCTATGCGGTTGGA+GGG | - | chr8.2:79513331-79513350 | MS.gene37027:CDS | 40.0% | |
TTGTGCGACTTACTCTTAGA+TGG | - | chr8.2:79514547-79514566 | MS.gene37027:intron | 40.0% | |
! | AAGTGGGGATAAGAGTTTTG+AGG | - | chr8.2:79513636-79513655 | MS.gene37027:CDS | 40.0% |
! | AGAGCTCGATTTTAAGCTTC+AGG | - | chr8.2:79514373-79514392 | MS.gene37027:intron | 40.0% |
! | ATTCCACCTGAGTTAGCTTA+CGG | - | chr8.2:79511745-79511764 | MS.gene37027:CDS | 40.0% |
! | GAAAACTGTAATGGAAGACG+AGG | - | chr8.2:79514705-79514724 | MS.gene37027:CDS | 40.0% |
! | GTTCTTTTCGCTCTTAGGTT+TGG | + | chr8.2:79513120-79513139 | None:intergenic | 40.0% |
! | TTCTAGAGGCACACTTGTTT+GGG | + | chr8.2:79514653-79514672 | None:intergenic | 40.0% |
!! | ACTTTCTTGGATTAGTGTGG+AGG | - | chr8.2:79511831-79511850 | MS.gene37027:CDS | 40.0% |
!! | GATCTGGCCTTCTTTTTCTT+AGG | + | chr8.2:79514589-79514608 | None:intergenic | 40.0% |
!! | GCTACTTTCTTGGATTAGTG+TGG | - | chr8.2:79511828-79511847 | MS.gene37027:CDS | 40.0% |
!!! | AAGAGTTTTGAGGACAGTGA+AGG | - | chr8.2:79513646-79513665 | MS.gene37027:CDS | 40.0% |
!!! | GTTTTGGTTCATCTGAGTCT+CGG | - | chr8.2:79512955-79512974 | MS.gene37027:intron | 40.0% |
AAAGGCAGTGGCACAAGTAA+AGG | - | chr8.2:79514610-79514629 | MS.gene37027:CDS | 45.0% | |
AAGGCAGTGGCACAAGTAAA+GGG | - | chr8.2:79514611-79514630 | MS.gene37027:CDS | 45.0% | |
AAGTATGATTCTGCTCCGGT+TGG | - | chr8.2:79514329-79514348 | MS.gene37027:intron | 45.0% | |
ACAAGATCAAACACTGCGGT+GGG | - | chr8.2:79513569-79513588 | MS.gene37027:CDS | 45.0% | |
ACAATAGTTCTCGCTGGTCA+AGG | - | chr8.2:79513928-79513947 | MS.gene37027:intron | 45.0% | |
ACATGGGCCGAAAACTGTAA+TGG | - | chr8.2:79514696-79514715 | MS.gene37027:CDS | 45.0% | |
ACTCAGGTGGAATGGTGAAA+AGG | + | chr8.2:79511738-79511757 | None:intergenic | 45.0% | |
ACTTAAGAAGGGGGGGAAAT+GGG | - | chr8.2:79511888-79511907 | MS.gene37027:CDS | 45.0% | |
AGACGAGGCAGAGATTATAG+TGG | - | chr8.2:79514720-79514739 | MS.gene37027:CDS | 45.0% | |
CAGGTTCGACAAATGGCTTA+TGG | + | chr8.2:79513972-79513991 | None:intergenic | 45.0% | |
CTAACAGCCATTGACAATGC+AGG | + | chr8.2:79512210-79512229 | None:intergenic | 45.0% | |
CTCAGGTGGAATGGTGAAAA+GGG | + | chr8.2:79511737-79511756 | None:intergenic | 45.0% | |
GAACTTCGTCAAGATCCTTG+GGG | + | chr8.2:79511918-79511937 | None:intergenic | 45.0% | |
GACTGTAGTGAAAGAAGAGC+TGG | - | chr8.2:79514756-79514775 | MS.gene37027:CDS | 45.0% | |
GCAGACAAGATCAAACACTG+CGG | - | chr8.2:79513565-79513584 | MS.gene37027:CDS | 45.0% | |
GTAAGCTAACTCAGGTGGAA+TGG | + | chr8.2:79511746-79511765 | None:intergenic | 45.0% | |
TACTTAAGAAGGGGGGGAAA+TGG | - | chr8.2:79511887-79511906 | MS.gene37027:CDS | 45.0% | |
TATGAAGCGCGTCTTGATGA+TGG | - | chr8.2:79512035-79512054 | MS.gene37027:intron | 45.0% | |
TGCGAATGTGTCACGTATGA+TGG | - | chr8.2:79514245-79514264 | MS.gene37027:intron | 45.0% | |
! | AACAAGTGTGCCTCTAGAAG+AGG | - | chr8.2:79514654-79514673 | MS.gene37027:CDS | 45.0% |
! | ACAAGTGTGCCTCTAGAAGA+GGG | - | chr8.2:79514655-79514674 | MS.gene37027:CDS | 45.0% |
! | CTTCTAGAGGCACACTTGTT+TGG | + | chr8.2:79514654-79514673 | None:intergenic | 45.0% |
! | GCACTTTTATCACCATCAGC+TGG | + | chr8.2:79512409-79512428 | None:intergenic | 45.0% |
! | GTTTTTGATCAACAGCTCGG+AGG | - | chr8.2:79513782-79513801 | MS.gene37027:CDS | 45.0% |
! | TGTGTCACGTATGATGGTGA+TGG | - | chr8.2:79514251-79514270 | MS.gene37027:intron | 45.0% |
!! | ATAGATGGATTCGGTGAGAC+CGG | - | chr8.2:79512379-79512398 | MS.gene37027:CDS | 45.0% |
!! | ATGGTGGGTTTCAGCTGAAA+AGG | - | chr8.2:79514270-79514289 | MS.gene37027:CDS | 45.0% |
!! | GAGCTCTAGGCTATCAGAAT+CGG | + | chr8.2:79514360-79514379 | None:intergenic | 45.0% |
!! | TCACGTATGATGGTGATGGT+GGG | - | chr8.2:79514255-79514274 | MS.gene37027:intron | 45.0% |
!! | TCACTTTGTGGGTATCGATG+TGG | + | chr8.2:79513154-79513173 | None:intergenic | 45.0% |
!! | TGGTGGGTTTCAGCTGAAAA+GGG | - | chr8.2:79514271-79514290 | MS.gene37027:CDS | 45.0% |
!!! | GGCACTGTCTTTTTTCGCAA+GGG | - | chr8.2:79512702-79512721 | MS.gene37027:CDS | 45.0% |
!!! | TGGCACTGTCTTTTTTCGCA+AGG | - | chr8.2:79512701-79512720 | MS.gene37027:CDS | 45.0% |
!! | AAAAAAAAATAAACAATAAA+AGG | + | chr8.2:79513740-79513759 | None:intergenic | 5.0% |
AAGGCCAGATCTAAAGGCAG+TGG | - | chr8.2:79514598-79514617 | MS.gene37027:intron | 50.0% | |
AGGCAGTGGCACAAGTAAAG+GGG | - | chr8.2:79514612-79514631 | MS.gene37027:CDS | 50.0% | |
ATCTGAGTCTCGGCAGGAAT+TGG | - | chr8.2:79512965-79512984 | MS.gene37027:intron | 50.0% | |
ATTCACAACAGACGAGGGTG+AGG | - | chr8.2:79512755-79512774 | MS.gene37027:intron | 50.0% | |
CAAGATCAAACACTGCGGTG+GGG | - | chr8.2:79513570-79513589 | MS.gene37027:CDS | 50.0% | |
CCATTTGTCGAACCTGAACC+AGG | - | chr8.2:79513976-79513995 | MS.gene37027:CDS | 50.0% | |
GACAAGATCAAACACTGCGG+TGG | - | chr8.2:79513568-79513587 | MS.gene37027:CDS | 50.0% | |
GAGCAGCGCAAGTGATTAGA+GGG | - | chr8.2:79512865-79512884 | MS.gene37027:CDS | 50.0% | |
GATGCACCGTAAGCTAACTC+AGG | + | chr8.2:79511754-79511773 | None:intergenic | 50.0% | |
GTGGAGTTCACAGTGAAGGA+CGG | - | chr8.2:79512083-79512102 | MS.gene37027:intron | 50.0% | |
TCAGAATCGGCCTTTCCAAC+CGG | + | chr8.2:79514347-79514366 | None:intergenic | 50.0% | |
TGAGCAGCGCAAGTGATTAG+AGG | - | chr8.2:79512864-79512883 | MS.gene37027:CDS | 50.0% | |
TGATTCTGCTCCGGTTGGAA+AGG | - | chr8.2:79514334-79514353 | MS.gene37027:intron | 50.0% | |
TTCACAACAGACGAGGGTGA+GGG | - | chr8.2:79512756-79512775 | MS.gene37027:intron | 50.0% | |
TTCGTGATGCAGTGAGAGAG+TGG | - | chr8.2:79513087-79513106 | MS.gene37027:CDS | 50.0% | |
TTGTGTTCCCCCTCTTCTAG+AGG | + | chr8.2:79514667-79514686 | None:intergenic | 50.0% | |
! | AAGTGTGCCTCTAGAAGAGG+GGG | - | chr8.2:79514657-79514676 | MS.gene37027:CDS | 50.0% |
! | CAAGTGTGCCTCTAGAAGAG+GGG | - | chr8.2:79514656-79514675 | MS.gene37027:CDS | 50.0% |
! | CCTGGTTCAGGTTCGACAAA+TGG | + | chr8.2:79513979-79513998 | None:intergenic | 50.0% |
! | GAGTTAGCTTACGGTGCATC+TGG | - | chr8.2:79511754-79511773 | MS.gene37027:CDS | 50.0% |
! | TGTGCCACTGCCTTTAGATC+TGG | + | chr8.2:79514605-79514624 | None:intergenic | 50.0% |
!! | GTCACGTATGATGGTGATGG+TGG | - | chr8.2:79514254-79514273 | MS.gene37027:intron | 50.0% |
!!! | AGGCGGCGTCGATTCATTTT+TGG | - | chr8.2:79513423-79513442 | MS.gene37027:CDS | 50.0% |
!!! | GTCTTTTTTCGCAAGGGCCA+TGG | - | chr8.2:79512708-79512727 | MS.gene37027:CDS | 50.0% |
!!! | TTTTTTCGCAAGGGCCATGG+CGG | - | chr8.2:79512711-79512730 | MS.gene37027:CDS | 50.0% |
ATCAAACACTGCGGTGGGGT+GGG | - | chr8.2:79513574-79513593 | MS.gene37027:CDS | 55.0% | |
GCACCGTAAGCTAACTCAGG+TGG | + | chr8.2:79511751-79511770 | None:intergenic | 55.0% | |
GGGGAAATGGGAAAACCCCA+AGG | - | chr8.2:79511900-79511919 | MS.gene37027:CDS | 55.0% | |
TGGTTCATCTGAGTCTCGGC+AGG | - | chr8.2:79512959-79512978 | MS.gene37027:intron | 55.0% | |
!! | ATCACCATCAGCTGGCTTGC+CGG | + | chr8.2:79512401-79512420 | None:intergenic | 55.0% |
GATCAAACACTGCGGTGGGG+TGG | - | chr8.2:79513573-79513592 | MS.gene37027:CDS | 60.0% | |
GCTCTGCTTCATCTCCGCCA+TGG | + | chr8.2:79512728-79512747 | None:intergenic | 60.0% | |
GTCTCGGCAGGAATTGGCAG+TGG | - | chr8.2:79512971-79512990 | MS.gene37027:intron | 60.0% | |
GTTGGAGGGCAAGGATGCCA+TGG | - | chr8.2:79513345-79513364 | MS.gene37027:CDS | 60.0% | |
TCAAACACTGCGGTGGGGTG+GGG | - | chr8.2:79513575-79513594 | MS.gene37027:CDS | 60.0% | |
TGCTATGCGGTTGGAGGGCA+AGG | - | chr8.2:79513336-79513355 | MS.gene37027:CDS | 60.0% | |
GAGACCGGCAAGCCAGCTGA+TGG | - | chr8.2:79512394-79512413 | MS.gene37027:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 79511715 | 79514825 | 79511715 | ID=MS.gene37027 |
chr8.2 | mRNA | 79511715 | 79514825 | 79511715 | ID=MS.gene37027.t1;Parent=MS.gene37027 |
chr8.2 | exon | 79514600 | 79514825 | 79514600 | ID=MS.gene37027.t1.exon1;Parent=MS.gene37027.t1 |
chr8.2 | CDS | 79514600 | 79514825 | 79514600 | ID=cds.MS.gene37027.t1;Parent=MS.gene37027.t1 |
chr8.2 | exon | 79514436 | 79514510 | 79514436 | ID=MS.gene37027.t1.exon2;Parent=MS.gene37027.t1 |
chr8.2 | CDS | 79514436 | 79514510 | 79514436 | ID=cds.MS.gene37027.t1;Parent=MS.gene37027.t1 |
chr8.2 | exon | 79514264 | 79514344 | 79514264 | ID=MS.gene37027.t1.exon3;Parent=MS.gene37027.t1 |
chr8.2 | CDS | 79514264 | 79514344 | 79514264 | ID=cds.MS.gene37027.t1;Parent=MS.gene37027.t1 |
chr8.2 | exon | 79513963 | 79514157 | 79513963 | ID=MS.gene37027.t1.exon4;Parent=MS.gene37027.t1 |
chr8.2 | CDS | 79513963 | 79514157 | 79513963 | ID=cds.MS.gene37027.t1;Parent=MS.gene37027.t1 |
chr8.2 | exon | 79513769 | 79513864 | 79513769 | ID=MS.gene37027.t1.exon5;Parent=MS.gene37027.t1 |
chr8.2 | CDS | 79513769 | 79513864 | 79513769 | ID=cds.MS.gene37027.t1;Parent=MS.gene37027.t1 |
chr8.2 | exon | 79513312 | 79513669 | 79513312 | ID=MS.gene37027.t1.exon6;Parent=MS.gene37027.t1 |
chr8.2 | CDS | 79513312 | 79513669 | 79513312 | ID=cds.MS.gene37027.t1;Parent=MS.gene37027.t1 |
chr8.2 | exon | 79513044 | 79513213 | 79513044 | ID=MS.gene37027.t1.exon7;Parent=MS.gene37027.t1 |
chr8.2 | CDS | 79513044 | 79513213 | 79513044 | ID=cds.MS.gene37027.t1;Parent=MS.gene37027.t1 |
chr8.2 | exon | 79512836 | 79512971 | 79512836 | ID=MS.gene37027.t1.exon8;Parent=MS.gene37027.t1 |
chr8.2 | CDS | 79512836 | 79512971 | 79512836 | ID=cds.MS.gene37027.t1;Parent=MS.gene37027.t1 |
chr8.2 | exon | 79512591 | 79512743 | 79512591 | ID=MS.gene37027.t1.exon9;Parent=MS.gene37027.t1 |
chr8.2 | CDS | 79512591 | 79512743 | 79512591 | ID=cds.MS.gene37027.t1;Parent=MS.gene37027.t1 |
chr8.2 | exon | 79512093 | 79512512 | 79512093 | ID=MS.gene37027.t1.exon10;Parent=MS.gene37027.t1 |
chr8.2 | CDS | 79512093 | 79512512 | 79512093 | ID=cds.MS.gene37027.t1;Parent=MS.gene37027.t1 |
chr8.2 | exon | 79511715 | 79511994 | 79511715 | ID=MS.gene37027.t1.exon11;Parent=MS.gene37027.t1 |
chr8.2 | CDS | 79511715 | 79511994 | 79511715 | ID=cds.MS.gene37027.t1;Parent=MS.gene37027.t1 |
Gene Sequence |
Protein sequence |