AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene37027


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37027.t1 MTR_8g008640 82.319 526 40 2 1 526 82 554 0.0 862
MS.gene37027.t1 MTR_8g008640 68.932 103 18 3 637 725 553 655 5.79e-30 127
MS.gene37027.t1 MTR_8g012340 80.769 286 54 1 1 286 105 389 3.77e-147 442
MS.gene37027.t1 MTR_8g012340 36.771 223 123 5 65 281 52 262 5.49e-32 132
MS.gene37027.t1 MTR_8g038785 75.862 290 60 3 1 287 237 519 3.46e-139 422
MS.gene37027.t1 MTR_8g038785 33.937 221 123 6 72 281 189 397 2.49e-24 108
MS.gene37027.t1 MTR_7g053470 72.727 286 75 3 1 286 99 381 1.44e-136 413
MS.gene37027.t1 MTR_7g053470 34.599 237 137 5 51 281 32 256 3.94e-31 129
MS.gene37027.t1 MTR_8g080980 65.385 286 96 2 1 286 103 385 3.17e-126 387
MS.gene37027.t1 MTR_8g080980 34.118 255 149 6 53 300 38 280 1.35e-34 139
MS.gene37027.t1 MTR_8g080980 35.000 140 85 2 173 312 41 174 5.99e-15 79.0
MS.gene37027.t1 MTR_8g010620 63.281 256 87 4 35 286 7 259 2.03e-94 298
MS.gene37027.t1 MTR_8g010620 34.078 179 101 5 1 167 89 262 1.30e-17 85.9
MS.gene37027.t1 MTR_8g010620 63.281 256 87 4 35 286 43 295 2.40e-94 300
MS.gene37027.t1 MTR_8g010620 34.078 179 101 5 1 167 125 298 1.40e-17 86.3
MS.gene37027.t1 MTR_8g010620 57.651 281 87 5 35 286 43 320 9.01e-89 286
MS.gene37027.t1 MTR_8g010620 34.078 179 101 5 1 167 150 323 2.01e-17 85.9
MS.gene37027.t1 MTR_8g011100 60.630 254 73 5 37 286 76 306 4.54e-85 275
MS.gene37027.t1 MTR_8g011100 33.333 171 95 6 1 167 154 309 4.45e-12 69.3
MS.gene37027.t1 MTR_1g017870 48.421 285 137 4 1 283 104 380 4.09e-76 255
MS.gene37027.t1 MTR_1g017870 34.764 233 129 7 56 281 42 258 7.09e-28 119
MS.gene37027.t1 MTR_1g017870 48.421 285 137 4 1 283 104 380 8.01e-76 256
MS.gene37027.t1 MTR_1g017870 34.764 233 129 7 56 281 42 258 9.89e-28 119
MS.gene37027.t1 MTR_1g017870 48.070 285 138 4 1 283 80 356 1.09e-75 254
MS.gene37027.t1 MTR_8g011140 49.462 279 94 9 14 286 12 249 3.49e-63 212
MS.gene37027.t1 MTR_8g010620 59.278 194 75 2 94 286 2 192 1.40e-62 212
MS.gene37027.t1 MTR_8g010620 34.078 179 101 5 1 167 22 195 4.87e-18 86.3
MS.gene37027.t1 MTR_8g023740 64.516 155 49 3 74 227 7 156 1.42e-53 182
MS.gene37027.t1 MTR_1g017870 47.143 210 107 2 76 283 47 254 2.73e-52 187
MS.gene37027.t1 MTR_1g017870 29.167 168 108 3 1 159 87 252 9.70e-14 74.3
MS.gene37027.t1 MTR_1g017870 47.143 210 107 2 76 283 47 254 6.67e-52 187
MS.gene37027.t1 MTR_1g017870 29.167 168 108 3 1 159 87 252 1.17e-13 74.3
MS.gene37027.t1 MTR_1g017870 49.708 171 84 1 113 283 2 170 1.92e-44 163
MS.gene37027.t1 MTR_1g017870 29.167 168 108 3 1 159 3 168 4.72e-14 74.7
MS.gene37027.t1 MTR_1g017870 49.708 171 84 1 113 283 2 170 3.62e-44 163
MS.gene37027.t1 MTR_1g017870 29.167 168 108 3 1 159 3 168 7.03e-14 74.3
MS.gene37027.t1 MTR_8g038775 52.027 148 58 3 493 637 5 142 4.70e-36 133
MS.gene37027.t1 MTR_8g011560 67.677 99 29 1 191 286 26 124 1.51e-34 132
MS.gene37027.t1 MTR_8g012360 45.000 180 45 4 1 150 1 156 1.76e-34 132
MS.gene37027.t1 MTR_8g038765 50.993 151 61 4 583 724 1 147 1.43e-30 124
MS.gene37027.t1 MTR_8g008643 73.267 101 22 3 617 712 72 172 3.94e-30 117
MS.gene37027.t1 MTR_4g055500 26.394 269 170 5 23 283 15 263 1.19e-18 90.9
MS.gene37027.t1 MTR_4g055500 25.581 301 184 7 1 281 104 384 2.19e-18 90.1
MS.gene37027.t1 MTR_8g011580 41.935 124 43 2 164 286 74 169 2.15e-16 80.9
MS.gene37027.t1 MTR_8g011580 38.000 150 66 5 19 167 49 172 8.32e-16 79.3
MS.gene37027.t1 MTR_8g012350 61.818 55 21 0 219 273 18 72 2.48e-15 71.6
MS.gene37027.t1 MTR_8g089030 25.837 209 139 4 429 637 249 441 2.32e-14 77.4
MS.gene37027.t1 MTR_8g089030 25.837 209 139 4 429 637 249 441 3.27e-14 77.0
MS.gene37027.t1 MTR_8g011110 81.579 38 7 0 246 283 21 58 1.19e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37027.t1 AT3G25230 70.280 286 83 2 1 286 104 387 4.02e-133 405
MS.gene37027.t1 AT3G25230 37.021 235 130 5 53 281 39 261 3.36e-34 138
MS.gene37027.t1 AT3G25230 70.280 286 83 2 1 286 104 387 5.78e-133 405
MS.gene37027.t1 AT3G25230 37.021 235 130 5 53 281 39 261 3.10e-34 138
MS.gene37027.t1 AT5G48570 70.139 288 82 4 1 286 112 397 5.31e-132 403
MS.gene37027.t1 AT5G48570 36.538 260 137 8 53 300 47 290 1.26e-38 152
MS.gene37027.t1 AT3G54010 25.685 292 195 7 1 281 12 292 1.09e-16 84.3
MS.gene37027.t1 AT3G54010 30.337 178 114 4 106 283 4 171 8.04e-13 72.0
MS.gene37027.t1 AT3G54010 27.917 240 155 5 52 283 32 261 2.29e-16 83.6
MS.gene37027.t1 AT3G54010 25.685 292 195 7 1 281 102 382 2.70e-16 83.6

Find 143 sgRNAs with CRISPR-Local

Find 230 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTAGAGGCACACTTGTT+TGG 0.221159 8.2:+79511867 None:intergenic
GCCTACTTGAAGTAGATTAT+TGG 0.235795 8.2:+79513114 None:intergenic
CCTTTCATTGACTTACAAAA+TGG 0.254823 8.2:-79512700 MS.gene37027:CDS
TTGTCACCGCATATTTCTTT+AGG 0.262483 8.2:-79512092 MS.gene37027:intron
TTTACATCAGCTCCATCTTT+TGG 0.280437 8.2:+79513965 None:intergenic
TTCTAGAGGCACACTTGTTT+GGG 0.288264 8.2:+79511868 None:intergenic
TTGACTATTGCACCTAAGTA+TGG 0.295366 8.2:-79513585 MS.gene37027:CDS
TAAAACTTGAGTTAATTTCT+TGG 0.306863 8.2:-79514063 MS.gene37027:CDS
ATGATGTTGAGCTACTTTCT+TGG 0.309089 8.2:-79514700 MS.gene37027:CDS
ATCACCATCAGCTGGCTTGC+CGG 0.314544 8.2:+79514120 None:intergenic
TTAGTTGGGCTGAACATTTA+AGG 0.323355 8.2:+79511715 None:intergenic
ATTGCACCTAAGTATGGTTT+TGG 0.326379 8.2:-79513579 MS.gene37027:CDS
GCATTAGGAGGAATATGTTT+TGG 0.327638 8.2:+79514734 None:intergenic
AGTGCCATCTTTAAGCTTAC+AGG 0.331921 8.2:+79513833 None:intergenic
TAATGTAAGGTTGAATTTGC+AGG 0.335084 8.2:+79513522 None:intergenic
AAGGATCTTGACGAAGTTCT+AGG 0.338401 8.2:-79514599 MS.gene37027:intron
TTCCAAATCAAATTATTAGT+TGG 0.354074 8.2:+79511700 None:intergenic
ATCTGAGTCTCGGCAGGAAT+TGG 0.359941 8.2:-79513553 MS.gene37027:CDS
TCCAAATCAAATTATTAGTT+GGG 0.366969 8.2:+79511701 None:intergenic
AAATTCAACCTTACATTATG+AGG 0.380710 8.2:-79513517 MS.gene37027:CDS
AAATTCAGGTGCAAGCGATT+AGG 0.389351 8.2:-79512835 MS.gene37027:intron
TGTGCCACTGCCTTTAGATC+TGG 0.391153 8.2:+79511916 None:intergenic
AGAACTTCGTCAAGATCCTT+GGG 0.393521 8.2:+79514602 None:intergenic
TCATATTGCAGAGTTGCATT+AGG 0.397770 8.2:+79514719 None:intergenic
TTGTGCGACTTACTCTTAGA+TGG 0.398720 8.2:-79511971 MS.gene37027:CDS
ATCTCTAATATTGCATTAGC+TGG 0.406995 8.2:+79514085 None:intergenic
TCAAACACTGCGGTGGGGTG+GGG 0.413461 8.2:-79512943 MS.gene37027:CDS
GAGTTAGCTTACGGTGCATC+TGG 0.417291 8.2:-79514764 MS.gene37027:CDS
AATTGATAGCTTCACTTTGT+GGG 0.421844 8.2:+79513356 None:intergenic
ATCAAACACTGCGGTGGGGT+GGG 0.422691 8.2:-79512944 MS.gene37027:CDS
AAGGCAGTGGCACAAGTAAA+GGG 0.428638 8.2:-79511907 MS.gene37027:CDS
ATGGTGGGTTTCAGCTGAAA+AGG 0.430839 8.2:-79512248 MS.gene37027:CDS
GAATTGATAGCTTCACTTTG+TGG 0.431581 8.2:+79513355 None:intergenic
TAGAACTTCGTCAAGATCCT+TGG 0.437907 8.2:+79514601 None:intergenic
TGCTATGCGGTTGGAGGGCA+AGG 0.441748 8.2:-79513182 MS.gene37027:CDS
TATTGTGTAATAGATGGATT+CGG 0.448405 8.2:-79514148 MS.gene37027:intron
CTCAGGTGGAATGGTGAAAA+GGG 0.451099 8.2:+79514784 None:intergenic
AAAGGCAGTGGCACAAGTAA+AGG 0.454978 8.2:-79511908 MS.gene37027:CDS
AAAGTGAAGCTATCAATTCC+AGG 0.461706 8.2:-79513351 MS.gene37027:CDS
TGTAAGTCAATGAAAGGAAA+GGG 0.467913 8.2:+79512706 None:intergenic
AGTAGCAAAGTCTGATAAAG+TGG 0.468341 8.2:-79514454 MS.gene37027:CDS
ACAATGTTCTAAATTTATGA+AGG 0.470273 8.2:-79512643 MS.gene37027:CDS
AGCTGTAATGAGTATGAAGA+AGG 0.471234 8.2:-79513622 MS.gene37027:CDS
GATCAAACACTGCGGTGGGG+TGG 0.471687 8.2:-79512945 MS.gene37027:CDS
ACGAAGAGTCTTACGAAACT+TGG 0.472179 8.2:+79513449 None:intergenic
GAGCTCTAGGCTATCAGAAT+CGG 0.473961 8.2:+79512161 None:intergenic
TGCAGGTTAATTCATATCCC+TGG 0.475657 8.2:+79512310 None:intergenic
TATGAAGCGCGTCTTGATGA+TGG 0.477063 8.2:-79514483 MS.gene37027:CDS
AGTTAGTATCATTCATAAAG+AGG 0.480272 8.2:-79513491 MS.gene37027:CDS
TCAGAATCGGCCTTTCCAAC+CGG 0.481314 8.2:+79512174 None:intergenic
AGCAGAATCATACTTCAAAC+AGG 0.482633 8.2:+79512197 None:intergenic
TAGTGTGGAGGATATATGTA+AGG 0.483756 8.2:-79514675 MS.gene37027:CDS
TTTAAAGAGATACTTAAGAA+GGG 0.484915 8.2:-79514641 MS.gene37027:CDS
ACTCAGGTGGAATGGTGAAA+AGG 0.488523 8.2:+79514783 None:intergenic
AACAAGTGTGCCTCTAGAAG+AGG 0.492155 8.2:-79511864 MS.gene37027:CDS
TAACTCAACCTCATAATGTA+AGG 0.492274 8.2:+79513509 None:intergenic
GGCTGTTAGAACTATGAAGA+AGG 0.495009 8.2:-79514297 MS.gene37027:CDS
TGAGCAGCGCAAGTGATTAG+AGG 0.495598 8.2:-79513654 MS.gene37027:intron
TTAAAGAGATACTTAAGAAG+GGG 0.506830 8.2:-79514640 MS.gene37027:CDS
AGACGAGGCAGAGATTATAG+TGG 0.507993 8.2:-79511798 MS.gene37027:CDS
GTTTAAAGAGATACTTAAGA+AGG 0.508683 8.2:-79514642 MS.gene37027:CDS
GCTACTTTCTTGGATTAGTG+TGG 0.509423 8.2:-79514690 MS.gene37027:CDS
GTGTACTTTCCAATGACAAT+GGG 0.512302 8.2:+79513315 None:intergenic
TTACAAAATGGAAATGTTTG+AGG 0.513846 8.2:-79512688 MS.gene37027:CDS
GGATACAAACGTCCAAAAGA+TGG 0.515267 8.2:-79513977 MS.gene37027:CDS
TGGTTCATCTGAGTCTCGGC+AGG 0.516137 8.2:-79513559 MS.gene37027:CDS
CTGACCTGTAAGCTTAAAGA+TGG 0.520411 8.2:-79513837 MS.gene37027:CDS
ATTCCACCTGAGTTAGCTTA+CGG 0.523205 8.2:-79514773 MS.gene37027:CDS
ATAGATGGATTCGGTGAGAC+CGG 0.524595 8.2:-79514139 MS.gene37027:intron
GAAGCTTAAAATCGAGCTCT+AGG 0.525943 8.2:+79512148 None:intergenic
GATGAACCAAAACCATACTT+AGG 0.526036 8.2:+79513573 None:intergenic
TGAAGTAACTGAGGACAAGA+TGG 0.529349 8.2:-79514029 MS.gene37027:CDS
AATGAGTATGAAGAAGGGTG+AGG 0.533366 8.2:-79513616 MS.gene37027:CDS
GCAATTAAATGCTATGCGGT+TGG 0.538169 8.2:-79513191 MS.gene37027:CDS
ACAAGATCAAACACTGCGGT+GGG 0.539303 8.2:-79512949 MS.gene37027:CDS
ATTAAATGCTATGCGGTTGG+AGG 0.539710 8.2:-79513188 MS.gene37027:CDS
TGGTGGGTTTCAGCTGAAAA+GGG 0.542880 8.2:-79512247 MS.gene37027:CDS
TTGTAAGTCAATGAAAGGAA+AGG 0.548554 8.2:+79512705 None:intergenic
GCTGTAATGAGTATGAAGAA+GGG 0.548847 8.2:-79513621 MS.gene37027:CDS
GTTGGAGGGCAAGGATGCCA+TGG 0.549283 8.2:-79513173 MS.gene37027:CDS
GTCTCGGCAGGAATTGGCAG+TGG 0.555493 8.2:-79513547 MS.gene37027:CDS
ACAAGTGTGCCTCTAGAAGA+GGG 0.555647 8.2:-79511863 MS.gene37027:CDS
TAAAGAGATACTTAAGAAGG+GGG 0.557587 8.2:-79514639 MS.gene37027:CDS
TATTGCAGAGTTGCATTAGG+AGG 0.559247 8.2:+79514722 None:intergenic
ACATGGGCCGAAAACTGTAA+TGG 0.559534 8.2:-79511822 MS.gene37027:CDS
TGCGAATGTGTCACGTATGA+TGG 0.560651 8.2:-79512273 MS.gene37027:CDS
TAGAACTATGAAGAAGGGAG+AGG 0.561771 8.2:-79514291 MS.gene37027:CDS
GTGGAGGATATATGTAAGGA+TGG 0.563225 8.2:-79514671 MS.gene37027:CDS
ACTTTCTTGGATTAGTGTGG+AGG 0.565290 8.2:-79514687 MS.gene37027:CDS
TTTGAAGTATGATTCTGCTC+CGG 0.568365 8.2:-79512193 MS.gene37027:CDS
GACTGTAGTGAAAGAAGAGC+TGG 0.569222 8.2:-79511762 MS.gene37027:CDS
GTAAGCTAACTCAGGTGGAA+TGG 0.570045 8.2:+79514775 None:intergenic
ACAATAGTTCTCGCTGGTCA+AGG 0.570760 8.2:-79512590 MS.gene37027:intron
TGATTCTGCTCCGGTTGGAA+AGG 0.570959 8.2:-79512184 MS.gene37027:CDS
GAGCAGCGCAAGTGATTAGA+GGG 0.573710 8.2:-79513653 MS.gene37027:intron
AAGTATGATTCTGCTCCGGT+TGG 0.574917 8.2:-79512189 MS.gene37027:CDS
AAAGAGATACTTAAGAAGGG+GGG 0.579256 8.2:-79514638 MS.gene37027:CDS
GTCACGTATGATGGTGATGG+TGG 0.581082 8.2:-79512264 MS.gene37027:CDS
GAGACCGGCAAGCCAGCTGA+TGG 0.585795 8.2:-79514124 MS.gene37027:CDS
AGAGATTATAGTGGAAGATG+AGG 0.586082 8.2:-79511789 MS.gene37027:CDS
TCCAATAATCTACTTCAAGT+AGG 0.587583 8.2:-79513115 MS.gene37027:CDS
GCTGTTAGAACTATGAAGAA+GGG 0.592887 8.2:-79514296 MS.gene37027:CDS
TGTGTACTTTCCAATGACAA+TGG 0.594788 8.2:+79513314 None:intergenic
AAGGCCAGATCTAAAGGCAG+TGG 0.595229 8.2:-79511920 MS.gene37027:CDS
TTAAATGCTATGCGGTTGGA+GGG 0.596647 8.2:-79513187 MS.gene37027:CDS
GCTCTGCTTCATCTCCGCCA+TGG 0.596981 8.2:+79513793 None:intergenic
TTCGTGATGCAGTGAGAGAG+TGG 0.598771 8.2:-79513431 MS.gene37027:CDS
GACAAGATCAAACACTGCGG+TGG 0.602279 8.2:-79512950 MS.gene37027:CDS
TAAGTCAATGAAAGGAAAGG+GGG 0.603681 8.2:+79512708 None:intergenic
TGATCAACAATAGTTCTCGC+TGG 0.607129 8.2:-79512596 MS.gene37027:CDS
AAGAGATACTTAAGAAGGGG+GGG 0.607788 8.2:-79514637 MS.gene37027:CDS
GTAAGTCAATGAAAGGAAAG+GGG 0.608927 8.2:+79512707 None:intergenic
GAACACAATGTAGAGACACA+TGG 0.609771 8.2:-79511839 MS.gene37027:CDS
AAGATTGTGAAGGAAGGTGA+AGG 0.613450 8.2:-79513998 MS.gene37027:CDS
AGTATCATTCATAAAGAGGA+CGG 0.619850 8.2:-79513487 MS.gene37027:CDS
CTAACAGCCATTGACAATGC+AGG 0.627352 8.2:+79514311 None:intergenic
TCACTTTGTGGGTATCGATG+TGG 0.628195 8.2:+79513367 None:intergenic
GTTTGAATTCACAACAGACG+AGG 0.632600 8.2:-79513769 MS.gene37027:CDS
AAGTGTGCCTCTAGAAGAGG+GGG 0.632715 8.2:-79511861 MS.gene37027:CDS
GCACCGTAAGCTAACTCAGG+TGG 0.633539 8.2:+79514770 None:intergenic
GAACTTCGTCAAGATCCTTG+GGG 0.643363 8.2:+79514603 None:intergenic
GGGGAAATGGGAAAACCCCA+AGG 0.646147 8.2:-79514618 MS.gene37027:CDS
AGGCAGTGGCACAAGTAAAG+GGG 0.649162 8.2:-79511906 MS.gene37027:CDS
AAGTCAATGAAAGGAAAGGG+GGG 0.649736 8.2:+79512709 None:intergenic
TCACGTATGATGGTGATGGT+GGG 0.653156 8.2:-79512263 MS.gene37027:CDS
TGTGTCACGTATGATGGTGA+TGG 0.656537 8.2:-79512267 MS.gene37027:CDS
TAAAGTGGAGTTCACAGTGA+AGG 0.658633 8.2:-79514439 MS.gene37027:CDS
CAAGTGTGCCTCTAGAAGAG+GGG 0.664743 8.2:-79511862 MS.gene37027:CDS
GATGCACCGTAAGCTAACTC+AGG 0.666265 8.2:+79514767 None:intergenic
GTGGAGTTCACAGTGAAGGA+CGG 0.666408 8.2:-79514435 MS.gene37027:intron
AACACAATGTAGAGACACAT+GGG 0.667328 8.2:-79511838 MS.gene37027:CDS
TTGTCATTGGAAAGTACACA+TGG 0.671862 8.2:-79513311 MS.gene37027:intron
TGATGTAATTAACAAGACGT+TGG 0.674269 8.2:-79512424 MS.gene37027:CDS
CAAGATCAAACACTGCGGTG+GGG 0.676481 8.2:-79512948 MS.gene37027:CDS
TTTGAATTCACAACAGACGA+GGG 0.679151 8.2:-79513768 MS.gene37027:intron
GAGGATATATGTAAGGATGG+CGG 0.681749 8.2:-79514668 MS.gene37027:CDS
GATGCATATGACTGTAGTGA+GGG 0.684895 8.2:+79513053 None:intergenic
AATAATCTACTTCAAGTAGG+CGG 0.691614 8.2:-79513112 MS.gene37027:CDS
GAAAACTGTAATGGAAGACG+AGG 0.704418 8.2:-79511813 MS.gene37027:CDS
ATCATTCATAAAGAGGACGG+AGG 0.715633 8.2:-79513484 MS.gene37027:CDS
ACAGGCAATTAAATGCTATG+CGG 0.717518 8.2:-79513195 MS.gene37027:intron
TGATGCATATGACTGTAGTG+AGG 0.734024 8.2:+79513052 None:intergenic
GCAGACAAGATCAAACACTG+CGG 0.841747 8.2:-79512953 MS.gene37027:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGTATAAAAACAAATTAAT+AGG + chr8.2:79512817-79512836 None:intergenic 10.0%
!!! TAATAGTATTTTATTTGAAT+CGG - chr8.2:79513541-79513560 MS.gene37027:CDS 10.0%
!!! TTTTTCACAAAATAAAATAA+AGG + chr8.2:79514475-79514494 None:intergenic 10.0%
!! AAAAAGAGTTAATATATCAA+CGG + chr8.2:79512349-79512368 None:intergenic 15.0%
!! ATATATGATTTACTTAATCT+GGG - chr8.2:79514496-79514515 MS.gene37027:intron 15.0%
!! GATTCAAATAAAATACTATT+AGG + chr8.2:79513542-79513561 None:intergenic 15.0%
!! TATATATGATTTACTTAATC+TGG - chr8.2:79514495-79514514 MS.gene37027:intron 15.0%
!!! AATTTTTCCATATATACTAT+GGG - chr8.2:79513373-79513392 MS.gene37027:CDS 15.0%
!!! TAATTTTTCCATATATACTA+TGG - chr8.2:79513372-79513391 MS.gene37027:CDS 15.0%
!!! TTTTTTTATTGTGTAATAGA+TGG - chr8.2:79512364-79512383 MS.gene37027:CDS 15.0%
!! ATAAAAATGCATATTCAAGT+GGG - chr8.2:79513620-79513639 MS.gene37027:CDS 20.0%
!! ATGTAAATTACCATTGATAA+TGG - chr8.2:79512576-79512595 MS.gene37027:intron 20.0%
!! ATTATCTTAAATTGTTGCAT+TGG - chr8.2:79512781-79512800 MS.gene37027:intron 20.0%
!! TAAAACTTGAGTTAATTTCT+TGG - chr8.2:79512455-79512474 MS.gene37027:CDS 20.0%
!! TATGTTTCGTTTCAAAAAAA+TGG + chr8.2:79513603-79513622 None:intergenic 20.0%
!! TTTAAAGAGATACTTAAGAA+GGG - chr8.2:79511877-79511896 MS.gene37027:CDS 20.0%
!!! ACAATGTTCTAAATTTATGA+AGG - chr8.2:79513875-79513894 MS.gene37027:intron 20.0%
!!! ACTTTTTATAGAGACAATAA+AGG - chr8.2:79514122-79514141 MS.gene37027:CDS 20.0%
!!! ATTTTACCTAAAGAAATATG+CGG + chr8.2:79514435-79514454 None:intergenic 20.0%
!!! ATTTTAGATATGATTTACCA+GGG - chr8.2:79514191-79514210 MS.gene37027:intron 20.0%
!!! ATTTTTCCATATATACTATG+GGG - chr8.2:79513374-79513393 MS.gene37027:CDS 20.0%
!!! GAATTTTTAGTTAAAGTGTT+TGG - chr8.2:79513238-79513257 MS.gene37027:intron 20.0%
!!! TCAATTGATATTTCTATTAC+AGG - chr8.2:79513305-79513324 MS.gene37027:intron 20.0%
!!! TTTTGTCAATTTTGAAATTC+AGG - chr8.2:79513669-79513688 MS.gene37027:intron 20.0%
! AAATTCAACCTTACATTATG+AGG - chr8.2:79513001-79513020 MS.gene37027:intron 25.0%
! AGTTAGTATCATTCATAAAG+AGG - chr8.2:79513027-79513046 MS.gene37027:intron 25.0%
! CATAAAAATGCATATTCAAG+TGG - chr8.2:79513619-79513638 MS.gene37027:CDS 25.0%
! GGTATTTCAACATTTCATAA+TGG - chr8.2:79513704-79513723 MS.gene37027:intron 25.0%
! GTTTAAAGAGATACTTAAGA+AGG - chr8.2:79511876-79511895 MS.gene37027:CDS 25.0%
! TAAAAATGCATATTCAAGTG+GGG - chr8.2:79513621-79513640 MS.gene37027:CDS 25.0%
! TATGGAAAAATTAAGATCCA+TGG + chr8.2:79513365-79513384 None:intergenic 25.0%
! TTAAAGAGATACTTAAGAAG+GGG - chr8.2:79511878-79511897 MS.gene37027:CDS 25.0%
! TTAAGCTTCAGGAAAAAATT+GGG - chr8.2:79514384-79514403 MS.gene37027:intron 25.0%
! TTACAAAATGGAAATGTTTG+AGG - chr8.2:79513830-79513849 MS.gene37027:CDS 25.0%
! TTTAAGCTTCAGGAAAAAAT+TGG - chr8.2:79514383-79514402 MS.gene37027:intron 25.0%
!! GATTTTAGATATGATTTACC+AGG - chr8.2:79514190-79514209 MS.gene37027:intron 25.0%
!! TATTGTGTAATAGATGGATT+CGG - chr8.2:79512370-79512389 MS.gene37027:CDS 25.0%
!! TTTTTCCATATATACTATGG+GGG - chr8.2:79513375-79513394 MS.gene37027:CDS 25.0%
AAACACACCTAAGAAAAAGA+AGG - chr8.2:79514579-79514598 MS.gene37027:intron 30.0%
AAGAAAAGAGCCATTATCAA+TGG + chr8.2:79512589-79512608 None:intergenic 30.0%
AAGTTCTTTACACAACACTT+TGG - chr8.2:79512279-79512298 MS.gene37027:CDS 30.0%
AATAATCTACTTCAAGTAGG+CGG - chr8.2:79513406-79513425 MS.gene37027:CDS 30.0%
AGTATCATTCATAAAGAGGA+CGG - chr8.2:79513031-79513050 MS.gene37027:intron 30.0%
AGTTCTTTACACAACACTTT+GGG - chr8.2:79512280-79512299 MS.gene37027:CDS 30.0%
ATCAAAAAGATTGTGAAGGA+AGG - chr8.2:79512514-79512533 MS.gene37027:intron 30.0%
ATCATAAATATATCAGTGCC+TGG + chr8.2:79513997-79514016 None:intergenic 30.0%
ATCTCTAATATTGCATTAGC+TGG + chr8.2:79512436-79512455 None:intergenic 30.0%
CACTCAAAAAAAGAAGAAGA+TGG - chr8.2:79514149-79514168 MS.gene37027:intron 30.0%
GGTTATCAAAAAGATTGTGA+AGG - chr8.2:79512510-79512529 MS.gene37027:intron 30.0%
TAAAGAGATACTTAAGAAGG+GGG - chr8.2:79511879-79511898 MS.gene37027:CDS 30.0%
TAACTCAACCTCATAATGTA+AGG + chr8.2:79513012-79513031 None:intergenic 30.0%
TAATGTAAGGTTGAATTTGC+AGG + chr8.2:79512999-79513018 None:intergenic 30.0%
TAGAGTCACTCAATGAAAAA+TGG + chr8.2:79511966-79511985 None:intergenic 30.0%
TCAAAAAAAGAAGAAGATGG+TGG - chr8.2:79514152-79514171 MS.gene37027:intron 30.0%
TCCAATAATCTACTTCAAGT+AGG - chr8.2:79513403-79513422 MS.gene37027:CDS 30.0%
TGATGTAATTAACAAGACGT+TGG - chr8.2:79514094-79514113 MS.gene37027:CDS 30.0%
TGTAAGTCAATGAAAGGAAA+GGG + chr8.2:79513815-79513834 None:intergenic 30.0%
TGTGTAAAGAACTTACATAG+AGG + chr8.2:79512273-79512292 None:intergenic 30.0%
TTGTAAGTCAATGAAAGGAA+AGG + chr8.2:79513816-79513835 None:intergenic 30.0%
! AATTGATAGCTTCACTTTGT+GGG + chr8.2:79513165-79513184 None:intergenic 30.0%
! AGTCATATGCATCATTTTGA+TGG - chr8.2:79513475-79513494 MS.gene37027:CDS 30.0%
! AGTGCGAACAAATTTTATCA+TGG - chr8.2:79512108-79512127 MS.gene37027:CDS 30.0%
! CAGTTTATGTGATCTTTTGA+AGG - chr8.2:79514025-79514044 MS.gene37027:CDS 30.0%
! CCATTTTGTAAGTCAATGAA+AGG + chr8.2:79513821-79513840 None:intergenic 30.0%
! TCTGGGTTTTTCTTGATTTT+TGG - chr8.2:79514513-79514532 MS.gene37027:intron 30.0%
! TTTTCCATATATACTATGGG+GGG - chr8.2:79513376-79513395 MS.gene37027:CDS 30.0%
!! ATATGCATCATTTTGATGGT+AGG - chr8.2:79513479-79513498 MS.gene37027:CDS 30.0%
!! CCTTTCATTGACTTACAAAA+TGG - chr8.2:79513818-79513837 MS.gene37027:CDS 30.0%
!!! ATTGTTTTTGATCAACAGCT+CGG - chr8.2:79513779-79513798 MS.gene37027:CDS 30.0%
AAAAAGAAGGCCAGATCTAA+AGG - chr8.2:79514592-79514611 MS.gene37027:intron 35.0%
AAAGAGATACTTAAGAAGGG+GGG - chr8.2:79511880-79511899 MS.gene37027:CDS 35.0%
AAAGTGAAGCTATCAATTCC+AGG - chr8.2:79513167-79513186 MS.gene37027:CDS 35.0%
AACACAATGTAGAGACACAT+GGG - chr8.2:79514680-79514699 MS.gene37027:CDS 35.0%
AATTCACTGCAACAACAGAA+AGG + chr8.2:79512016-79512035 None:intergenic 35.0%
ACAGGCAATTAAATGCTATG+CGG - chr8.2:79513323-79513342 MS.gene37027:CDS 35.0%
AGCAGAATCATACTTCAAAC+AGG + chr8.2:79514324-79514343 None:intergenic 35.0%
AGCTGTAATGAGTATGAAGA+AGG - chr8.2:79512896-79512915 MS.gene37027:CDS 35.0%
AGTAGCAAAGTCTGATAAAG+TGG - chr8.2:79512064-79512083 MS.gene37027:intron 35.0%
ATTTCCCCCCATAGTATATA+TGG + chr8.2:79513383-79513402 None:intergenic 35.0%
GATGAACCAAAACCATACTT+AGG + chr8.2:79512948-79512967 None:intergenic 35.0%
GCCTACTTGAAGTAGATTAT+TGG + chr8.2:79513407-79513426 None:intergenic 35.0%
GCTGTAATGAGTATGAAGAA+GGG - chr8.2:79512897-79512916 MS.gene37027:CDS 35.0%
GCTGTTAGAACTATGAAGAA+GGG - chr8.2:79512222-79512241 MS.gene37027:CDS 35.0%
GTAAGTCAATGAAAGGAAAG+GGG + chr8.2:79513814-79513833 None:intergenic 35.0%
GTGTACTTTCCAATGACAAT+GGG + chr8.2:79513206-79513225 None:intergenic 35.0%
TAAGTCAATGAAAGGAAAGG+GGG + chr8.2:79513813-79513832 None:intergenic 35.0%
TAGTGTGGAGGATATATGTA+AGG - chr8.2:79511843-79511862 MS.gene37027:CDS 35.0%
TATAATGTTCACCATGAGAC+AGG - chr8.2:79512174-79512193 MS.gene37027:CDS 35.0%
TCATATTGCAGAGTTGCATT+AGG + chr8.2:79511802-79511821 None:intergenic 35.0%
TGTGTACTTTCCAATGACAA+TGG + chr8.2:79513207-79513226 None:intergenic 35.0%
TTAGTTGGGCTGAACATTTA+AGG + chr8.2:79514806-79514825 None:intergenic 35.0%
TTGACTATTGCACCTAAGTA+TGG - chr8.2:79512933-79512952 MS.gene37027:CDS 35.0%
TTGTCACCGCATATTTCTTT+AGG - chr8.2:79514426-79514445 MS.gene37027:intron 35.0%
TTTGAATTCACAACAGACGA+GGG - chr8.2:79512750-79512769 MS.gene37027:intron 35.0%
! AGAGATTATAGTGGAAGATG+AGG - chr8.2:79514729-79514748 MS.gene37027:CDS 35.0%
! ATGATGTTGAGCTACTTTCT+TGG - chr8.2:79511818-79511837 MS.gene37027:CDS 35.0%
! ATGGGAAAACATTCTTTTCC+TGG + chr8.2:79513188-79513207 None:intergenic 35.0%
! ATTGCACCTAAGTATGGTTT+TGG - chr8.2:79512939-79512958 MS.gene37027:CDS 35.0%
! ATTGGAAAGTACACATGGTA+TGG - chr8.2:79513212-79513231 MS.gene37027:intron 35.0%
! CAGCTTTTACTGAAAAGCTT+TGG + chr8.2:79514076-79514095 None:intergenic 35.0%
! GAATGTTTTCCCATTGTCAT+TGG - chr8.2:79513194-79513213 MS.gene37027:CDS 35.0%
! GAATTGATAGCTTCACTTTG+TGG + chr8.2:79513166-79513185 None:intergenic 35.0%
! GCATTAGGAGGAATATGTTT+TGG + chr8.2:79511787-79511806 None:intergenic 35.0%
! GCATTTCTTCTTCTTTTTGC+AGG + chr8.2:79514228-79514247 None:intergenic 35.0%
! TCAGCTGAAAAGGGATTTTT+CGG - chr8.2:79514280-79514299 MS.gene37027:CDS 35.0%
! TCGTCTTCCATTACAGTTTT+CGG + chr8.2:79514706-79514725 None:intergenic 35.0%
! TCTTTGTTCTTTTCGCTCTT+AGG + chr8.2:79513125-79513144 None:intergenic 35.0%
! TTGTCATTGGAAAGTACACA+TGG - chr8.2:79513207-79513226 MS.gene37027:intron 35.0%
! TTTACATCAGCTCCATCTTT+TGG + chr8.2:79512556-79512575 None:intergenic 35.0%
! TTTGAAGTATGATTCTGCTC+CGG - chr8.2:79514325-79514344 MS.gene37027:CDS 35.0%
! TTTTTGTCCTGCATTGTCAA+TGG - chr8.2:79512200-79512219 MS.gene37027:CDS 35.0%
!! TTAGGAGGAATATGTTTTGG+AGG + chr8.2:79511784-79511803 None:intergenic 35.0%
!!! GACTGTTTTTGAAGTAACTG+AGG - chr8.2:79512480-79512499 MS.gene37027:CDS 35.0%
AAATTCAGGTGCAAGCGATT+AGG - chr8.2:79513683-79513702 MS.gene37027:intron 40.0%
AAGAGATACTTAAGAAGGGG+GGG - chr8.2:79511881-79511900 MS.gene37027:CDS 40.0%
AAGATTGTGAAGGAAGGTGA+AGG - chr8.2:79512520-79512539 MS.gene37027:intron 40.0%
AAGGATCTTGACGAAGTTCT+AGG - chr8.2:79511919-79511938 MS.gene37027:CDS 40.0%
AAGTCAATGAAAGGAAAGGG+GGG + chr8.2:79513812-79513831 None:intergenic 40.0%
AATATATCAGTGCCTGGTTC+AGG + chr8.2:79513991-79514010 None:intergenic 40.0%
AATGAGTATGAAGAAGGGTG+AGG - chr8.2:79512902-79512921 MS.gene37027:CDS 40.0%
ACGAAGAGTCTTACGAAACT+TGG + chr8.2:79513072-79513091 None:intergenic 40.0%
AGAACTTCGTCAAGATCCTT+GGG + chr8.2:79511919-79511938 None:intergenic 40.0%
AGTGCCATCTTTAAGCTTAC+AGG + chr8.2:79512688-79512707 None:intergenic 40.0%
ATCATTCATAAAGAGGACGG+AGG - chr8.2:79513034-79513053 MS.gene37027:intron 40.0%
ATTAAATGCTATGCGGTTGG+AGG - chr8.2:79513330-79513349 MS.gene37027:CDS 40.0%
CAACAGACATTCACTTTCGT+TGG + chr8.2:79512841-79512860 None:intergenic 40.0%
CACGTTTCTCTATGCTATGA+AGG - chr8.2:79512317-79512336 MS.gene37027:CDS 40.0%
CTGACCTGTAAGCTTAAAGA+TGG - chr8.2:79512681-79512700 MS.gene37027:CDS 40.0%
GAACACAATGTAGAGACACA+TGG - chr8.2:79514679-79514698 MS.gene37027:CDS 40.0%
GAAGCTTAAAATCGAGCTCT+AGG + chr8.2:79514373-79514392 None:intergenic 40.0%
GACAAAAATGACCTGTCTCA+TGG + chr8.2:79512188-79512207 None:intergenic 40.0%
GAGGATATATGTAAGGATGG+CGG - chr8.2:79511850-79511869 MS.gene37027:CDS 40.0%
GATGCATATGACTGTAGTGA+GGG + chr8.2:79513468-79513487 None:intergenic 40.0%
GCAATTAAATGCTATGCGGT+TGG - chr8.2:79513327-79513346 MS.gene37027:CDS 40.0%
GGATACAAACGTCCAAAAGA+TGG - chr8.2:79512541-79512560 MS.gene37027:intron 40.0%
GGCTGTTAGAACTATGAAGA+AGG - chr8.2:79512221-79512240 MS.gene37027:CDS 40.0%
GTGGAGGATATATGTAAGGA+TGG - chr8.2:79511847-79511866 MS.gene37027:CDS 40.0%
GTTTGAATTCACAACAGACG+AGG - chr8.2:79512749-79512768 MS.gene37027:intron 40.0%
TAAAGTGGAGTTCACAGTGA+AGG - chr8.2:79512079-79512098 MS.gene37027:intron 40.0%
TAGAACTATGAAGAAGGGAG+AGG - chr8.2:79512227-79512246 MS.gene37027:CDS 40.0%
TAGAACTTCGTCAAGATCCT+TGG + chr8.2:79511920-79511939 None:intergenic 40.0%
TATTGCAGAGTTGCATTAGG+AGG + chr8.2:79511799-79511818 None:intergenic 40.0%
TGAAGTAACTGAGGACAAGA+TGG - chr8.2:79512489-79512508 MS.gene37027:CDS 40.0%
TGATCAACAATAGTTCTCGC+TGG - chr8.2:79513922-79513941 MS.gene37027:intron 40.0%
TGATGCATATGACTGTAGTG+AGG + chr8.2:79513469-79513488 None:intergenic 40.0%
TGCAGGTTAATTCATATCCC+TGG + chr8.2:79514211-79514230 None:intergenic 40.0%
TTAAATGCTATGCGGTTGGA+GGG - chr8.2:79513331-79513350 MS.gene37027:CDS 40.0%
TTGTGCGACTTACTCTTAGA+TGG - chr8.2:79514547-79514566 MS.gene37027:intron 40.0%
! AAGTGGGGATAAGAGTTTTG+AGG - chr8.2:79513636-79513655 MS.gene37027:CDS 40.0%
! AGAGCTCGATTTTAAGCTTC+AGG - chr8.2:79514373-79514392 MS.gene37027:intron 40.0%
! ATTCCACCTGAGTTAGCTTA+CGG - chr8.2:79511745-79511764 MS.gene37027:CDS 40.0%
! GAAAACTGTAATGGAAGACG+AGG - chr8.2:79514705-79514724 MS.gene37027:CDS 40.0%
! GTTCTTTTCGCTCTTAGGTT+TGG + chr8.2:79513120-79513139 None:intergenic 40.0%
! TTCTAGAGGCACACTTGTTT+GGG + chr8.2:79514653-79514672 None:intergenic 40.0%
!! ACTTTCTTGGATTAGTGTGG+AGG - chr8.2:79511831-79511850 MS.gene37027:CDS 40.0%
!! GATCTGGCCTTCTTTTTCTT+AGG + chr8.2:79514589-79514608 None:intergenic 40.0%
!! GCTACTTTCTTGGATTAGTG+TGG - chr8.2:79511828-79511847 MS.gene37027:CDS 40.0%
!!! AAGAGTTTTGAGGACAGTGA+AGG - chr8.2:79513646-79513665 MS.gene37027:CDS 40.0%
!!! GTTTTGGTTCATCTGAGTCT+CGG - chr8.2:79512955-79512974 MS.gene37027:intron 40.0%
AAAGGCAGTGGCACAAGTAA+AGG - chr8.2:79514610-79514629 MS.gene37027:CDS 45.0%
AAGGCAGTGGCACAAGTAAA+GGG - chr8.2:79514611-79514630 MS.gene37027:CDS 45.0%
AAGTATGATTCTGCTCCGGT+TGG - chr8.2:79514329-79514348 MS.gene37027:intron 45.0%
ACAAGATCAAACACTGCGGT+GGG - chr8.2:79513569-79513588 MS.gene37027:CDS 45.0%
ACAATAGTTCTCGCTGGTCA+AGG - chr8.2:79513928-79513947 MS.gene37027:intron 45.0%
ACATGGGCCGAAAACTGTAA+TGG - chr8.2:79514696-79514715 MS.gene37027:CDS 45.0%
ACTCAGGTGGAATGGTGAAA+AGG + chr8.2:79511738-79511757 None:intergenic 45.0%
ACTTAAGAAGGGGGGGAAAT+GGG - chr8.2:79511888-79511907 MS.gene37027:CDS 45.0%
AGACGAGGCAGAGATTATAG+TGG - chr8.2:79514720-79514739 MS.gene37027:CDS 45.0%
CAGGTTCGACAAATGGCTTA+TGG + chr8.2:79513972-79513991 None:intergenic 45.0%
CTAACAGCCATTGACAATGC+AGG + chr8.2:79512210-79512229 None:intergenic 45.0%
CTCAGGTGGAATGGTGAAAA+GGG + chr8.2:79511737-79511756 None:intergenic 45.0%
GAACTTCGTCAAGATCCTTG+GGG + chr8.2:79511918-79511937 None:intergenic 45.0%
GACTGTAGTGAAAGAAGAGC+TGG - chr8.2:79514756-79514775 MS.gene37027:CDS 45.0%
GCAGACAAGATCAAACACTG+CGG - chr8.2:79513565-79513584 MS.gene37027:CDS 45.0%
GTAAGCTAACTCAGGTGGAA+TGG + chr8.2:79511746-79511765 None:intergenic 45.0%
TACTTAAGAAGGGGGGGAAA+TGG - chr8.2:79511887-79511906 MS.gene37027:CDS 45.0%
TATGAAGCGCGTCTTGATGA+TGG - chr8.2:79512035-79512054 MS.gene37027:intron 45.0%
TGCGAATGTGTCACGTATGA+TGG - chr8.2:79514245-79514264 MS.gene37027:intron 45.0%
! AACAAGTGTGCCTCTAGAAG+AGG - chr8.2:79514654-79514673 MS.gene37027:CDS 45.0%
! ACAAGTGTGCCTCTAGAAGA+GGG - chr8.2:79514655-79514674 MS.gene37027:CDS 45.0%
! CTTCTAGAGGCACACTTGTT+TGG + chr8.2:79514654-79514673 None:intergenic 45.0%
! GCACTTTTATCACCATCAGC+TGG + chr8.2:79512409-79512428 None:intergenic 45.0%
! GTTTTTGATCAACAGCTCGG+AGG - chr8.2:79513782-79513801 MS.gene37027:CDS 45.0%
! TGTGTCACGTATGATGGTGA+TGG - chr8.2:79514251-79514270 MS.gene37027:intron 45.0%
!! ATAGATGGATTCGGTGAGAC+CGG - chr8.2:79512379-79512398 MS.gene37027:CDS 45.0%
!! ATGGTGGGTTTCAGCTGAAA+AGG - chr8.2:79514270-79514289 MS.gene37027:CDS 45.0%
!! GAGCTCTAGGCTATCAGAAT+CGG + chr8.2:79514360-79514379 None:intergenic 45.0%
!! TCACGTATGATGGTGATGGT+GGG - chr8.2:79514255-79514274 MS.gene37027:intron 45.0%
!! TCACTTTGTGGGTATCGATG+TGG + chr8.2:79513154-79513173 None:intergenic 45.0%
!! TGGTGGGTTTCAGCTGAAAA+GGG - chr8.2:79514271-79514290 MS.gene37027:CDS 45.0%
!!! GGCACTGTCTTTTTTCGCAA+GGG - chr8.2:79512702-79512721 MS.gene37027:CDS 45.0%
!!! TGGCACTGTCTTTTTTCGCA+AGG - chr8.2:79512701-79512720 MS.gene37027:CDS 45.0%
!! AAAAAAAAATAAACAATAAA+AGG + chr8.2:79513740-79513759 None:intergenic 5.0%
AAGGCCAGATCTAAAGGCAG+TGG - chr8.2:79514598-79514617 MS.gene37027:intron 50.0%
AGGCAGTGGCACAAGTAAAG+GGG - chr8.2:79514612-79514631 MS.gene37027:CDS 50.0%
ATCTGAGTCTCGGCAGGAAT+TGG - chr8.2:79512965-79512984 MS.gene37027:intron 50.0%
ATTCACAACAGACGAGGGTG+AGG - chr8.2:79512755-79512774 MS.gene37027:intron 50.0%
CAAGATCAAACACTGCGGTG+GGG - chr8.2:79513570-79513589 MS.gene37027:CDS 50.0%
CCATTTGTCGAACCTGAACC+AGG - chr8.2:79513976-79513995 MS.gene37027:CDS 50.0%
GACAAGATCAAACACTGCGG+TGG - chr8.2:79513568-79513587 MS.gene37027:CDS 50.0%
GAGCAGCGCAAGTGATTAGA+GGG - chr8.2:79512865-79512884 MS.gene37027:CDS 50.0%
GATGCACCGTAAGCTAACTC+AGG + chr8.2:79511754-79511773 None:intergenic 50.0%
GTGGAGTTCACAGTGAAGGA+CGG - chr8.2:79512083-79512102 MS.gene37027:intron 50.0%
TCAGAATCGGCCTTTCCAAC+CGG + chr8.2:79514347-79514366 None:intergenic 50.0%
TGAGCAGCGCAAGTGATTAG+AGG - chr8.2:79512864-79512883 MS.gene37027:CDS 50.0%
TGATTCTGCTCCGGTTGGAA+AGG - chr8.2:79514334-79514353 MS.gene37027:intron 50.0%
TTCACAACAGACGAGGGTGA+GGG - chr8.2:79512756-79512775 MS.gene37027:intron 50.0%
TTCGTGATGCAGTGAGAGAG+TGG - chr8.2:79513087-79513106 MS.gene37027:CDS 50.0%
TTGTGTTCCCCCTCTTCTAG+AGG + chr8.2:79514667-79514686 None:intergenic 50.0%
! AAGTGTGCCTCTAGAAGAGG+GGG - chr8.2:79514657-79514676 MS.gene37027:CDS 50.0%
! CAAGTGTGCCTCTAGAAGAG+GGG - chr8.2:79514656-79514675 MS.gene37027:CDS 50.0%
! CCTGGTTCAGGTTCGACAAA+TGG + chr8.2:79513979-79513998 None:intergenic 50.0%
! GAGTTAGCTTACGGTGCATC+TGG - chr8.2:79511754-79511773 MS.gene37027:CDS 50.0%
! TGTGCCACTGCCTTTAGATC+TGG + chr8.2:79514605-79514624 None:intergenic 50.0%
!! GTCACGTATGATGGTGATGG+TGG - chr8.2:79514254-79514273 MS.gene37027:intron 50.0%
!!! AGGCGGCGTCGATTCATTTT+TGG - chr8.2:79513423-79513442 MS.gene37027:CDS 50.0%
!!! GTCTTTTTTCGCAAGGGCCA+TGG - chr8.2:79512708-79512727 MS.gene37027:CDS 50.0%
!!! TTTTTTCGCAAGGGCCATGG+CGG - chr8.2:79512711-79512730 MS.gene37027:CDS 50.0%
ATCAAACACTGCGGTGGGGT+GGG - chr8.2:79513574-79513593 MS.gene37027:CDS 55.0%
GCACCGTAAGCTAACTCAGG+TGG + chr8.2:79511751-79511770 None:intergenic 55.0%
GGGGAAATGGGAAAACCCCA+AGG - chr8.2:79511900-79511919 MS.gene37027:CDS 55.0%
TGGTTCATCTGAGTCTCGGC+AGG - chr8.2:79512959-79512978 MS.gene37027:intron 55.0%
!! ATCACCATCAGCTGGCTTGC+CGG + chr8.2:79512401-79512420 None:intergenic 55.0%
GATCAAACACTGCGGTGGGG+TGG - chr8.2:79513573-79513592 MS.gene37027:CDS 60.0%
GCTCTGCTTCATCTCCGCCA+TGG + chr8.2:79512728-79512747 None:intergenic 60.0%
GTCTCGGCAGGAATTGGCAG+TGG - chr8.2:79512971-79512990 MS.gene37027:intron 60.0%
GTTGGAGGGCAAGGATGCCA+TGG - chr8.2:79513345-79513364 MS.gene37027:CDS 60.0%
TCAAACACTGCGGTGGGGTG+GGG - chr8.2:79513575-79513594 MS.gene37027:CDS 60.0%
TGCTATGCGGTTGGAGGGCA+AGG - chr8.2:79513336-79513355 MS.gene37027:CDS 60.0%
GAGACCGGCAAGCCAGCTGA+TGG - chr8.2:79512394-79512413 MS.gene37027:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 79511715 79514825 79511715 ID=MS.gene37027
chr8.2 mRNA 79511715 79514825 79511715 ID=MS.gene37027.t1;Parent=MS.gene37027
chr8.2 exon 79514600 79514825 79514600 ID=MS.gene37027.t1.exon1;Parent=MS.gene37027.t1
chr8.2 CDS 79514600 79514825 79514600 ID=cds.MS.gene37027.t1;Parent=MS.gene37027.t1
chr8.2 exon 79514436 79514510 79514436 ID=MS.gene37027.t1.exon2;Parent=MS.gene37027.t1
chr8.2 CDS 79514436 79514510 79514436 ID=cds.MS.gene37027.t1;Parent=MS.gene37027.t1
chr8.2 exon 79514264 79514344 79514264 ID=MS.gene37027.t1.exon3;Parent=MS.gene37027.t1
chr8.2 CDS 79514264 79514344 79514264 ID=cds.MS.gene37027.t1;Parent=MS.gene37027.t1
chr8.2 exon 79513963 79514157 79513963 ID=MS.gene37027.t1.exon4;Parent=MS.gene37027.t1
chr8.2 CDS 79513963 79514157 79513963 ID=cds.MS.gene37027.t1;Parent=MS.gene37027.t1
chr8.2 exon 79513769 79513864 79513769 ID=MS.gene37027.t1.exon5;Parent=MS.gene37027.t1
chr8.2 CDS 79513769 79513864 79513769 ID=cds.MS.gene37027.t1;Parent=MS.gene37027.t1
chr8.2 exon 79513312 79513669 79513312 ID=MS.gene37027.t1.exon6;Parent=MS.gene37027.t1
chr8.2 CDS 79513312 79513669 79513312 ID=cds.MS.gene37027.t1;Parent=MS.gene37027.t1
chr8.2 exon 79513044 79513213 79513044 ID=MS.gene37027.t1.exon7;Parent=MS.gene37027.t1
chr8.2 CDS 79513044 79513213 79513044 ID=cds.MS.gene37027.t1;Parent=MS.gene37027.t1
chr8.2 exon 79512836 79512971 79512836 ID=MS.gene37027.t1.exon8;Parent=MS.gene37027.t1
chr8.2 CDS 79512836 79512971 79512836 ID=cds.MS.gene37027.t1;Parent=MS.gene37027.t1
chr8.2 exon 79512591 79512743 79512591 ID=MS.gene37027.t1.exon9;Parent=MS.gene37027.t1
chr8.2 CDS 79512591 79512743 79512591 ID=cds.MS.gene37027.t1;Parent=MS.gene37027.t1
chr8.2 exon 79512093 79512512 79512093 ID=MS.gene37027.t1.exon10;Parent=MS.gene37027.t1
chr8.2 CDS 79512093 79512512 79512093 ID=cds.MS.gene37027.t1;Parent=MS.gene37027.t1
chr8.2 exon 79511715 79511994 79511715 ID=MS.gene37027.t1.exon11;Parent=MS.gene37027.t1
chr8.2 CDS 79511715 79511994 79511715 ID=cds.MS.gene37027.t1;Parent=MS.gene37027.t1
Gene Sequence

>MS.gene37027

ATGAAAAAAGGTGAAAAGGCCCTTTTCACCATTCCACCTGAGTTAGCTTACGGTGCATCTGGTTATCCTCCAAAACATATTCCTCCTAATGCAACTCTGCAATATGATGTTGAGCTACTTTCTTGGATTAGTGTGGAGGATATATGTAAGGATGGCGGTTTGTTTAAAGAGATACTTAAGAAGGGGGGGAAATGGGAAAACCCCAAGGATCTTGACGAAGTTCTAGGTAAACATATTACGAGTATATTCCATTTTTCATTGAGTGACTCTATTATTTGACTGTGTTAACTATAAAATACCTTTCTGTTGTTGCAGTGAATTATGAAGCGCGTCTTGATGATGGAAAACTAGTAGCAAAGTCTGATAAAGTGGAGTTCACAGTGAAGGACGGTTAGTGCGAACAAATTTTATCATGGTTTCTGTCTCTCATTTTCAATTTTTCTGATATGTGATGTCTAATATAATGTTCACCATGAGACAGGTCATTTTTGTCCTGCATTGTCAATGGCTGTTAGAACTATGAAGAAGGGAGAGGAAGCGACATTGACTGTGAAGCCTCTATGTAAGTTCTTTACACAACACTTTGGGAAATGTTTATATAACACGTTTCTCTATGCTATGAAGGTTTTCACCGTTGATATATTAACTCTTTTTTTATTGTGTAATAGATGGATTCGGTGAGACCGGCAAGCCAGCTGATGGTGATAAAAGTGCAGTACCAGCTAATGCAATATTAGAGATAAAACTTGAGTTAATTTCTTGGAAGACTGTTTTTGAAGTAACTGAGGACAAGATGGTTATCAAAAAGATTGTGAAGGAAGGTGAAGGATACAAACGTCCAAAAGATGGAGCTGATGTAAAATGTAAATTACCATTGATAATGGCTCTTTTCTTTTGCGTGTATTGTAATGTATTTAGTAGATAGATTTCTGATGATTTTCTTCATTTTGCATATTTGCAGTGAAACTGACCTGTAAGCTTAAAGATGGCACTGTCTTTTTTCGCAAGGGCCATGGCGGAGATGAAGCAGAGCTGTTTGAATTCACAACAGACGAGGGTGAGGGTGATTATCTTAAATTGTTGCATTGGTTCACTCTCTCCTATTAATTTGTTTTTATACTAACCAACGAAAGTGAATGTCTGTTGTGTTGAGCAGCGCAAGTGATTAGAGGGCTTGATAGAGCTGTAATGAGTATGAAGAAGGGTGAGGTAGCATCGTTGACTATTGCACCTAAGTATGGTTTTGGTTCATCTGAGTCTCGGCAGGAATTGGCAGTGGTTCCTGCAAATTCAACCTTACATTATGAGGTTGAGTTAGTATCATTCATAAAGAGGACGGAGGACGAAAAAAGATCCAAGTTTCGTAAGACTCTTCGTGATGCAGTGAGAGAGTGGTCTCAGACCAAACCTAAGAGCGAAAAGAACAAAGATTTCTACCACATCGATACCCACAAAGTGAAGCTATCAATTCCAGGAAAAGAATGTTTTCCCATTGTCATTGGAAAGTACACATGGTATGGAAAGAATTTTTAGTTAAAGTGTTTGGATAGTAAAGTGAAACTGAAAAATAATTATTTCTAATGTGTAATTTCAATTGATATTTCTATTACAGGCAATTAAATGCTATGCGGTTGGAGGGCAAGGATGCCATGGATCTTAATTTTTCCATATATACTATGGGGGGAAATTCCAATAATCTACTTCAAGTAGGCGGCGTCGATTCATTTTTGGTGTCTATTGCAACTCTTCACCCTCACTACAGTCATATGCATCATTTTGATGGTAGGTTTTTAAATTATAATTTTAAATTAAAAAAATAAAATTCCTAATAGTATTTTATTTGAATCGGTGCAGACAAGATCAAACACTGCGGTGGGGTGGGGATCCATTTTTTTGAAACGAAACATAAAAATGCATATTCAAGTGGGGATAAGAGTTTTGAGGACAGTGAAGGTTTTGTCAATTTTGAAATTCAGGTGCAAGCGATTAGGTATTTCAACATTTCATAATGGTTTCTTTATTCCTTTTATTGTTTATTTTTTTTTTTTTTTATGACTTAAGTATATTGTTTTTGATCAACAGCTCGGAGGTTTACCCCCCTTTCCTTTCATTGACTTACAAAATGGAAATGTTTGAGGCAAACAGAGAATTTGTGCTTGCACAATGTTCTAAATTTATGAAGGAAACACAGACAGAGTTCAAGAAAGTGATCAACAATAGTTCTCGCTGGTCAAGGTATTTATTATATATTTTTCCATAAGCCATTTGTCGAACCTGAACCAGGCACTGATATATTTATGATTTTTTGTGCAGTTTATGTGATCTTTTGAAGGATGAAAATTACATAGCTTCAGAATTCCAAAGCTTTTCAGTAAAAGCTGATGTAATTAACAAGACGTTGGTGAAAACTTTTTATAGAGACAATAAAGGCGAACACTCAAAAAAAGAAGAAGATGGTGGCTTGATAGCTTTTTTGATTTTAGATATGATTTACCAGGGATATGAATTAACCTGCAAAAAGAAGAAGAAATGCGAATGTGTCACGTATGATGGTGATGGTGGGTTTCAGCTGAAAAGGGATTTTTCGGCTATATTTCGTAAAGCTGCCTGTTTGAAGTATGATTCTGCTCCGGTTGGAAAGGCCGATTCTGATAGCCTAGAGCTCGATTTTAAGCTTCAGGAAAAAATTGGGTTTGTTATGTTGCAACTATTTGTCACCGCATATTTCTTTAGGTAAAATATATTTTTGCTTTTACTCCTTTATTTTATTTTGTGAAAAATATATATGATTTACTTAATCTGGGTTTTTCTTGATTTTTGGTATCATGTAGATTGTGCGACTTACTCTTAGATGGTTACGTGAAAAACACACCTAAGAAAAAGAAGGCCAGATCTAAAGGCAGTGGCACAAGTAAAGGGGATAAAAGAATGCAGTCCCAAACAAGTGTGCCTCTAGAAGAGGGGGAACACAATGTAGAGACACATGGGCCGAAAACTGTAATGGAAGACGAGGCAGAGATTATAGTGGAAGATGAGGCAGCGACTGTAGTGAAAGAAGAGCTGGATAGAACACTCTTCTTATTTTCTTCCTTAAATGTTCAGCCCAACTAA

Protein sequence

>MS.gene37027.t1

MKKGEKALFTIPPELAYGASGYPPKHIPPNATLQYDVELLSWISVEDICKDGGLFKEILKKGGKWENPKDLDEVLVNYEARLDDGKLVAKSDKVEFTVKDGHFCPALSMAVRTMKKGEEATLTVKPLYGFGETGKPADGDKSAVPANAILEIKLELISWKTVFEVTEDKMVIKKIVKEGEGYKRPKDGADVKLKLTCKLKDGTVFFRKGHGGDEAELFEFTTDEAQVIRGLDRAVMSMKKGEVASLTIAPKYGFGSSESRQELAVVPANSTLHYEVELVSFIKRTEDEKRSKFRKTLRDAVREWSQTKPKSEKNKDFYHIDTHKVKLSIPGKECFPIVIGKYTWQLNAMRLEGKDAMDLNFSIYTMGGNSNNLLQVGGVDSFLVSIATLHPHYSHMHHFDDKIKHCGGVGIHFFETKHKNAYSSGDKSFEDSEGFVNFEIQVQAISSEVYPPFLSLTYKMEMFEANREFVLAQCSKFMKETQTEFKKVINNSSRWSSLCDLLKDENYIASEFQSFSVKADVINKTLVKTFYRDNKGEHSKKEEDGGLIAFLILDMIYQGYELTCKKKKKCECVTYDGDGGFQLKRDFSAIFRKAACLKYDSAPVGKADSDSLELDFKLQEKIGFVMLQLFVTAYFFRLCDLLLDGYVKNTPKKKKARSKGSGTSKGDKRMQSQTSVPLEEGEHNVETHGPKTVMEDEAEIIVEDEAATVVKEELDRTLFLFSSLNVQPN