Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053124.t1 | AFK46072.1 | 97.5 | 325 | 8 | 0 | 1 | 325 | 1 | 325 | 5.40E-177 | 630.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053124.t1 | Q9SAH9 | 45.3 | 318 | 163 | 4 | 11 | 323 | 6 | 317 | 2.5e-69 | 263.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053124.t1 | I3T0N0 | 97.5 | 325 | 8 | 0 | 1 | 325 | 1 | 325 | 3.9e-177 | 630.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene053124 | MS.gene053809 | PPI |
| MS.gene96654 | MS.gene053124 | PPI |
| MS.gene65685 | MS.gene053124 | PPI |
| MS.gene63037 | MS.gene053124 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053124.t1 | MTR_4g009040 | 97.231 | 325 | 9 | 0 | 1 | 325 | 1 | 325 | 0.0 | 646 |
| MS.gene053124.t1 | MTR_4g009040 | 96.049 | 329 | 9 | 1 | 1 | 325 | 1 | 329 | 0.0 | 641 |
| MS.gene053124.t1 | MTR_4g009690 | 92.638 | 326 | 24 | 0 | 1 | 326 | 1 | 326 | 0.0 | 600 |
| MS.gene053124.t1 | MTR_4g009690 | 92.331 | 326 | 24 | 1 | 1 | 326 | 1 | 325 | 0.0 | 593 |
| MS.gene053124.t1 | MTR_4g006940 | 45.988 | 324 | 163 | 4 | 4 | 323 | 11 | 326 | 2.89e-88 | 268 |
| MS.gene053124.t1 | MTR_2g104960 | 46.667 | 315 | 159 | 3 | 13 | 323 | 20 | 329 | 9.32e-87 | 264 |
| MS.gene053124.t1 | MTR_5g072620 | 41.066 | 319 | 180 | 3 | 11 | 323 | 3 | 319 | 4.84e-82 | 251 |
| MS.gene053124.t1 | MTR_4g006940 | 48.736 | 277 | 134 | 3 | 4 | 280 | 11 | 279 | 4.43e-81 | 248 |
| MS.gene053124.t1 | MTR_4g006940 | 48.736 | 277 | 134 | 3 | 4 | 280 | 11 | 279 | 4.43e-81 | 248 |
| MS.gene053124.t1 | MTR_2g101330 | 41.562 | 320 | 183 | 4 | 10 | 325 | 2 | 321 | 7.61e-79 | 244 |
| MS.gene053124.t1 | MTR_3g005170 | 42.675 | 314 | 170 | 7 | 13 | 319 | 10 | 320 | 3.95e-77 | 239 |
| MS.gene053124.t1 | MTR_3g005210 | 42.453 | 318 | 173 | 7 | 9 | 319 | 2 | 316 | 1.03e-76 | 238 |
| MS.gene053124.t1 | MTR_4g077100 | 41.956 | 317 | 172 | 8 | 11 | 319 | 9 | 321 | 5.02e-75 | 234 |
| MS.gene053124.t1 | MTR_3g031650 | 39.432 | 317 | 188 | 2 | 11 | 323 | 3 | 319 | 8.24e-74 | 230 |
| MS.gene053124.t1 | MTR_8g062440 | 42.056 | 321 | 173 | 9 | 11 | 323 | 6 | 321 | 2.62e-73 | 229 |
| MS.gene053124.t1 | MTR_8g062440 | 41.925 | 322 | 173 | 8 | 11 | 323 | 6 | 322 | 5.22e-73 | 228 |
| MS.gene053124.t1 | MTR_8g062110 | 42.271 | 317 | 170 | 8 | 11 | 319 | 7 | 318 | 1.47e-71 | 225 |
| MS.gene053124.t1 | MTR_8g062110 | 42.271 | 317 | 170 | 8 | 11 | 319 | 16 | 327 | 1.58e-71 | 225 |
| MS.gene053124.t1 | MTR_4g077130 | 40.979 | 327 | 177 | 9 | 1 | 319 | 1 | 319 | 2.24e-71 | 224 |
| MS.gene053124.t1 | MTR_3g005170 | 43.911 | 271 | 145 | 6 | 13 | 279 | 10 | 277 | 2.28e-70 | 220 |
| MS.gene053124.t1 | MTR_2g028620 | 40.061 | 327 | 182 | 7 | 8 | 324 | 5 | 327 | 9.14e-70 | 221 |
| MS.gene053124.t1 | MTR_5g056600 | 37.188 | 320 | 190 | 5 | 12 | 323 | 3 | 319 | 5.73e-69 | 218 |
| MS.gene053124.t1 | MTR_4g077100 | 43.223 | 273 | 148 | 6 | 11 | 279 | 9 | 278 | 5.90e-69 | 217 |
| MS.gene053124.t1 | MTR_3g031650 | 40.075 | 267 | 159 | 1 | 11 | 276 | 3 | 269 | 8.65e-67 | 211 |
| MS.gene053124.t1 | MTR_8g062440 | 44.030 | 268 | 142 | 7 | 11 | 274 | 6 | 269 | 1.50e-65 | 209 |
| MS.gene053124.t1 | MTR_1g022440 | 37.578 | 322 | 186 | 11 | 13 | 323 | 8 | 325 | 1.80e-65 | 209 |
| MS.gene053124.t1 | MTR_8g062110 | 41.463 | 287 | 153 | 7 | 11 | 293 | 7 | 282 | 1.08e-64 | 206 |
| MS.gene053124.t1 | MTR_3g005170 | 38.854 | 314 | 151 | 7 | 13 | 319 | 10 | 289 | 1.20e-64 | 206 |
| MS.gene053124.t1 | MTR_8g062110 | 42.804 | 271 | 147 | 6 | 11 | 277 | 7 | 273 | 1.39e-64 | 205 |
| MS.gene053124.t1 | MTR_2g028620 | 43.431 | 274 | 148 | 5 | 8 | 276 | 5 | 276 | 1.92e-64 | 206 |
| MS.gene053124.t1 | MTR_1g022445 | 37.578 | 322 | 186 | 10 | 13 | 323 | 8 | 325 | 2.60e-64 | 206 |
| MS.gene053124.t1 | MTR_4g092080 | 38.739 | 333 | 178 | 11 | 10 | 322 | 11 | 337 | 1.17e-58 | 192 |
| MS.gene053124.t1 | MTR_7g074880 | 34.356 | 326 | 200 | 7 | 9 | 323 | 4 | 326 | 7.94e-53 | 176 |
| MS.gene053124.t1 | MTR_7g074820 | 35.952 | 331 | 191 | 10 | 9 | 323 | 4 | 329 | 5.27e-52 | 174 |
| MS.gene053124.t1 | MTR_4g081440 | 34.473 | 351 | 197 | 11 | 1 | 325 | 8 | 351 | 8.32e-52 | 175 |
| MS.gene053124.t1 | MTR_4g081440 | 34.097 | 349 | 202 | 10 | 1 | 325 | 12 | 356 | 8.69e-51 | 172 |
| MS.gene053124.t1 | MTR_7g074730 | 34.251 | 327 | 199 | 9 | 10 | 323 | 5 | 328 | 3.02e-50 | 170 |
| MS.gene053124.t1 | MTR_7g074850 | 33.131 | 329 | 203 | 9 | 9 | 323 | 4 | 329 | 5.45e-47 | 161 |
| MS.gene053124.t1 | MTR_4g023730 | 36.795 | 337 | 182 | 13 | 8 | 323 | 3 | 329 | 1.06e-44 | 155 |
| MS.gene053124.t1 | MTR_7g074710 | 33.537 | 328 | 200 | 12 | 9 | 323 | 4 | 326 | 1.84e-43 | 152 |
| MS.gene053124.t1 | MTR_8g062710 | 72.917 | 96 | 16 | 1 | 10 | 105 | 17 | 102 | 4.83e-39 | 134 |
| MS.gene053124.t1 | MTR_5g029990 | 32.468 | 308 | 168 | 10 | 13 | 303 | 12 | 296 | 1.07e-36 | 134 |
| MS.gene053124.t1 | MTR_8g062110 | 35.652 | 230 | 137 | 6 | 101 | 323 | 11 | 236 | 2.32e-36 | 131 |
| MS.gene053124.t1 | MTR_0164s0070 | 53.543 | 127 | 57 | 2 | 12 | 136 | 4 | 130 | 3.06e-36 | 130 |
| MS.gene053124.t1 | MTR_7g074870 | 32.384 | 281 | 178 | 7 | 52 | 323 | 11 | 288 | 1.42e-34 | 128 |
| MS.gene053124.t1 | MTR_6g406250 | 31.579 | 266 | 173 | 4 | 10 | 269 | 52 | 314 | 2.09e-31 | 121 |
| MS.gene053124.t1 | MTR_8g062708 | 87.302 | 63 | 8 | 0 | 218 | 280 | 5 | 67 | 4.59e-31 | 113 |
| MS.gene053124.t1 | MTR_8g062110 | 35.556 | 180 | 110 | 4 | 101 | 277 | 11 | 187 | 1.13e-29 | 112 |
| MS.gene053124.t1 | MTR_2g013230 | 29.345 | 351 | 202 | 14 | 7 | 323 | 2 | 340 | 2.01e-27 | 110 |
| MS.gene053124.t1 | MTR_7g117190 | 29.052 | 327 | 202 | 12 | 12 | 312 | 6 | 328 | 5.37e-26 | 106 |
| MS.gene053124.t1 | MTR_7g117190 | 30.345 | 290 | 173 | 11 | 12 | 276 | 6 | 291 | 1.08e-25 | 104 |
| MS.gene053124.t1 | MTR_6g406250 | 31.100 | 209 | 140 | 2 | 10 | 214 | 52 | 260 | 1.17e-25 | 103 |
| MS.gene053124.t1 | MTR_2g013250 | 29.240 | 342 | 210 | 13 | 7 | 321 | 1 | 337 | 2.71e-25 | 104 |
| MS.gene053124.t1 | MTR_0685s0030 | 32.704 | 159 | 101 | 3 | 165 | 319 | 2 | 158 | 4.65e-21 | 88.6 |
| MS.gene053124.t1 | MTR_2g013260 | 27.193 | 342 | 217 | 14 | 7 | 321 | 2 | 338 | 8.37e-20 | 89.0 |
| MS.gene053124.t1 | MTR_2g013260 | 37.179 | 156 | 85 | 7 | 7 | 154 | 2 | 152 | 8.69e-19 | 85.5 |
| MS.gene053124.t1 | MTR_3g011130 | 36.752 | 117 | 69 | 4 | 104 | 216 | 30 | 145 | 8.99e-16 | 73.6 |
| MS.gene053124.t1 | MTR_0685s0030 | 32.174 | 115 | 77 | 1 | 165 | 279 | 2 | 115 | 1.96e-15 | 72.0 |
| MS.gene053124.t1 | MTR_3g101500 | 28.854 | 253 | 154 | 10 | 11 | 257 | 2 | 234 | 3.64e-13 | 69.7 |
| MS.gene053124.t1 | MTR_3g101500 | 28.854 | 253 | 154 | 10 | 11 | 257 | 2 | 234 | 3.74e-13 | 69.3 |
| MS.gene053124.t1 | MTR_3g101500 | 31.250 | 192 | 109 | 9 | 11 | 199 | 2 | 173 | 6.65e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053124.t1 | AT2G33590 | 64.557 | 316 | 111 | 1 | 9 | 323 | 5 | 320 | 3.99e-145 | 412 |
| MS.gene053124.t1 | AT2G33600 | 62.382 | 319 | 119 | 1 | 6 | 323 | 2 | 320 | 7.71e-134 | 383 |
| MS.gene053124.t1 | AT1G76470 | 56.113 | 319 | 135 | 2 | 10 | 323 | 4 | 322 | 3.50e-115 | 336 |
| MS.gene053124.t1 | AT1G51410 | 45.201 | 323 | 165 | 8 | 10 | 324 | 6 | 324 | 3.66e-84 | 257 |
| MS.gene053124.t1 | AT1G80820 | 44.514 | 319 | 168 | 3 | 9 | 323 | 4 | 317 | 8.35e-84 | 256 |
| MS.gene053124.t1 | AT1G09510 | 46.130 | 323 | 164 | 7 | 8 | 323 | 3 | 322 | 5.05e-82 | 251 |
| MS.gene053124.t1 | AT1G15950 | 44.479 | 317 | 167 | 3 | 11 | 323 | 11 | 322 | 1.32e-80 | 249 |
| MS.gene053124.t1 | AT1G15950 | 44.479 | 317 | 167 | 3 | 11 | 323 | 11 | 322 | 1.32e-80 | 249 |
| MS.gene053124.t1 | AT5G19440 | 43.925 | 321 | 170 | 7 | 11 | 324 | 8 | 325 | 3.63e-80 | 247 |
| MS.gene053124.t1 | AT1G15950 | 44.300 | 307 | 162 | 3 | 11 | 313 | 11 | 312 | 3.50e-77 | 239 |
| MS.gene053124.t1 | AT1G80820 | 47.794 | 272 | 137 | 2 | 9 | 280 | 4 | 270 | 1.08e-76 | 236 |
| MS.gene053124.t1 | AT1G15950 | 47.636 | 275 | 139 | 2 | 11 | 285 | 11 | 280 | 1.29e-76 | 236 |
| MS.gene053124.t1 | AT1G15950 | 48.162 | 272 | 136 | 2 | 11 | 282 | 11 | 277 | 1.59e-76 | 236 |
| MS.gene053124.t1 | AT5G58490 | 40.625 | 320 | 186 | 2 | 8 | 323 | 4 | 323 | 2.27e-76 | 237 |
| MS.gene053124.t1 | AT2G02400 | 38.750 | 320 | 186 | 5 | 10 | 323 | 3 | 318 | 3.63e-76 | 236 |
| MS.gene053124.t1 | AT1G09490 | 42.320 | 319 | 176 | 6 | 11 | 323 | 6 | 322 | 8.45e-76 | 236 |
| MS.gene053124.t1 | AT4G35420 | 40.798 | 326 | 176 | 7 | 10 | 325 | 5 | 323 | 1.62e-75 | 235 |
| MS.gene053124.t1 | AT1G15950 | 48.148 | 270 | 135 | 2 | 11 | 280 | 11 | 275 | 1.73e-75 | 233 |
| MS.gene053124.t1 | AT1G09480 | 42.947 | 319 | 174 | 6 | 11 | 323 | 6 | 322 | 5.15e-74 | 231 |
| MS.gene053124.t1 | AT1G66800 | 44.375 | 320 | 164 | 8 | 11 | 323 | 6 | 318 | 1.47e-73 | 230 |
| MS.gene053124.t1 | AT1G09480 | 42.947 | 319 | 174 | 6 | 11 | 323 | 53 | 369 | 1.89e-73 | 231 |
| MS.gene053124.t1 | AT1G09500 | 41.121 | 321 | 180 | 6 | 11 | 323 | 6 | 325 | 3.42e-71 | 224 |
| MS.gene053124.t1 | AT1G09500 | 43.542 | 271 | 149 | 4 | 8 | 275 | 3 | 272 | 3.28e-68 | 215 |
| MS.gene053124.t1 | AT5G42800 | 39.939 | 328 | 182 | 11 | 7 | 323 | 2 | 325 | 7.19e-66 | 212 |
| MS.gene053124.t1 | AT1G09490 | 39.858 | 281 | 162 | 5 | 48 | 323 | 13 | 291 | 8.79e-59 | 191 |
| MS.gene053124.t1 | AT1G68540 | 34.494 | 316 | 200 | 4 | 15 | 323 | 6 | 321 | 1.01e-54 | 181 |
| MS.gene053124.t1 | AT1G09500 | 38.869 | 283 | 165 | 5 | 48 | 323 | 10 | 291 | 3.45e-54 | 179 |
| MS.gene053124.t1 | AT1G25460 | 34.603 | 315 | 199 | 4 | 15 | 323 | 6 | 319 | 1.63e-53 | 178 |
| MS.gene053124.t1 | AT2G45400 | 35.119 | 336 | 182 | 11 | 13 | 323 | 40 | 364 | 6.61e-49 | 167 |
| MS.gene053124.t1 | AT1G61720 | 35.542 | 332 | 196 | 11 | 11 | 326 | 11 | 340 | 2.09e-48 | 166 |
| MS.gene053124.t1 | AT4G27250 | 34.036 | 332 | 191 | 10 | 1 | 312 | 1 | 324 | 6.73e-48 | 164 |
| MS.gene053124.t1 | AT4G27250 | 32.945 | 343 | 190 | 10 | 1 | 312 | 1 | 334 | 7.74e-47 | 162 |
| MS.gene053124.t1 | AT1G15950 | 40.179 | 224 | 130 | 1 | 104 | 323 | 1 | 224 | 7.73e-45 | 153 |
| MS.gene053124.t1 | AT2G23910 | 32.517 | 286 | 172 | 7 | 7 | 282 | 1 | 275 | 5.51e-44 | 152 |
| MS.gene053124.t1 | AT2G23910 | 33.096 | 281 | 164 | 7 | 7 | 274 | 1 | 270 | 6.71e-44 | 152 |
| MS.gene053124.t1 | AT2G23910 | 33.579 | 271 | 159 | 6 | 14 | 274 | 11 | 270 | 1.07e-43 | 152 |
| MS.gene053124.t1 | AT2G45400 | 35.540 | 287 | 157 | 8 | 13 | 280 | 40 | 317 | 3.33e-43 | 151 |
| MS.gene053124.t1 | AT4G30470 | 34.074 | 270 | 158 | 6 | 14 | 274 | 11 | 269 | 1.47e-40 | 144 |
| MS.gene053124.t1 | AT2G45400 | 31.975 | 319 | 183 | 11 | 27 | 323 | 1 | 307 | 2.90e-36 | 133 |
| MS.gene053124.t1 | AT2G45400 | 40.092 | 217 | 110 | 7 | 13 | 213 | 40 | 252 | 9.19e-35 | 127 |
| MS.gene053124.t1 | AT2G23910 | 32.479 | 234 | 138 | 5 | 50 | 274 | 14 | 236 | 2.78e-33 | 124 |
| MS.gene053124.t1 | AT1G68540 | 32.850 | 207 | 135 | 2 | 121 | 323 | 8 | 214 | 2.55e-31 | 117 |
| MS.gene053124.t1 | AT5G14700 | 33.333 | 270 | 161 | 8 | 13 | 269 | 55 | 318 | 8.39e-29 | 114 |
| MS.gene053124.t1 | AT5G14700 | 32.547 | 212 | 131 | 5 | 13 | 214 | 55 | 264 | 4.39e-23 | 97.4 |
| MS.gene053124.t1 | AT4G33360 | 25.540 | 278 | 184 | 9 | 12 | 285 | 14 | 272 | 8.50e-14 | 71.2 |
| MS.gene053124.t1 | AT4G33360 | 25.540 | 278 | 184 | 9 | 12 | 285 | 14 | 272 | 9.15e-14 | 71.6 |
| MS.gene053124.t1 | AT4G33360 | 25.540 | 278 | 184 | 9 | 12 | 285 | 2 | 260 | 1.00e-13 | 71.2 |
Find 65 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTTGTCCTACTCTTGTTT+TGG | 0.177937 | 4.1:-86756899 | MS.gene053124:CDS |
| TCATCTATTGCTTTATCTTT+TGG | 0.240227 | 4.1:+86757174 | None:intergenic |
| CTCAGAGAAACTGCAAAGTT+TGG | 0.267800 | 4.1:-86755605 | MS.gene053124:CDS |
| CGTAGTTGATGCAATACTTT+TGG | 0.281567 | 4.1:-86756352 | MS.gene053124:CDS |
| TTCAATTTCGCGAAAAGAAC+TGG | 0.300306 | 4.1:-86756937 | MS.gene053124:CDS |
| AAGAAGAAGGTGTGTGTAAC+TGG | 0.304763 | 4.1:-86759151 | MS.gene053124:CDS |
| ATATGAACACTTGCTGAAAC+TGG | 0.322970 | 4.1:-86757611 | MS.gene053124:CDS |
| ACTCTTCAAAGCAGATATCT+TGG | 0.337278 | 4.1:-86757566 | MS.gene053124:CDS |
| CACTATCAACACACGAGATT+TGG | 0.344680 | 4.1:-86756283 | MS.gene053124:CDS |
| AAAGTTTGGGTTGGAAATTC+AGG | 0.345192 | 4.1:-86755591 | MS.gene053124:CDS |
| CTTCGTAGGGTACTTGTAGT+TGG | 0.358423 | 4.1:+86756236 | None:intergenic |
| TTTGTGGTTGACTGTAAAAT+TGG | 0.363006 | 4.1:+86756874 | None:intergenic |
| CAGTTCTTCTGCTTCTGTCT+TGG | 0.366868 | 4.1:+86756963 | None:intergenic |
| TCCGTTTACTCTGCAATTGT+TGG | 0.374795 | 4.1:-86757535 | MS.gene053124:CDS |
| AGAAACGTTACCTCGGGATT+AGG | 0.376697 | 4.1:+86757463 | None:intergenic |
| CTTAGAGGGCCATGACTCAT+TGG | 0.405731 | 4.1:-86756409 | MS.gene053124:intron |
| TCAGAGAAACTGCAAAGTTT+GGG | 0.410030 | 4.1:-86755604 | MS.gene053124:CDS |
| CATTGGAGAATAAGCTTCGT+TGG | 0.422203 | 4.1:-86756392 | MS.gene053124:CDS |
| TGACTCTGTTGAGAGCTATA+AGG | 0.425631 | 4.1:-86755548 | MS.gene053124:CDS |
| TCCATGGACAACGTAACCTT+TGG | 0.431514 | 4.1:+86759084 | None:intergenic |
| TCCAACAATTGCAGAGTAAA+CGG | 0.435199 | 4.1:+86757534 | None:intergenic |
| TTCGTAGGGTACTTGTAGTT+GGG | 0.439609 | 4.1:+86756237 | None:intergenic |
| AAGCAATAGATGAATCTTGT+TGG | 0.440763 | 4.1:-86757164 | MS.gene053124:CDS |
| AGCCAAGCTACTTGAATTTG+TGG | 0.447809 | 4.1:+86756858 | None:intergenic |
| GAAACTGAAGCTTACTTCGT+AGG | 0.466736 | 4.1:+86756222 | None:intergenic |
| CAAGACAGAAGCAGAAGAAC+TGG | 0.470722 | 4.1:-86756962 | MS.gene053124:CDS |
| CATGGAACTGTTAGAGAACC+TGG | 0.480190 | 4.1:-86759067 | MS.gene053124:intron |
| GGTACAACTGTTGAAGGTAC+AGG | 0.487565 | 4.1:+86757484 | None:intergenic |
| CAAAACAAGAGTAGGACAAA+TGG | 0.495861 | 4.1:+86756900 | None:intergenic |
| TTAGCAGTTCCCTTCACTGC+AGG | 0.496393 | 4.1:+86757282 | None:intergenic |
| TCCAAAGGTTACGTTGTCCA+TGG | 0.501173 | 4.1:-86759085 | MS.gene053124:CDS |
| AAGGTGTGTGTAACTGGAGC+AGG | 0.505575 | 4.1:-86759145 | MS.gene053124:CDS |
| CAGGAGGGTTTGTAGCATCA+TGG | 0.506329 | 4.1:-86759126 | MS.gene053124:CDS |
| GGATTAGGTACAACTGTTGA+AGG | 0.512345 | 4.1:+86757478 | None:intergenic |
| AACCACAAATTCAAGTAGCT+TGG | 0.514881 | 4.1:-86756860 | MS.gene053124:CDS |
| AGAAACTGCAAAGTTTGGGT+TGG | 0.515747 | 4.1:-86755600 | MS.gene053124:CDS |
| TATCAACACACGAGATTTGG+TGG | 0.518864 | 4.1:-86756280 | MS.gene053124:CDS |
| GGGTTGGAAATTCAGGCCAT+TGG | 0.519755 | 4.1:-86755584 | MS.gene053124:CDS |
| GTTAAGCTTCTTCTTTCCAA+AGG | 0.521805 | 4.1:-86759100 | MS.gene053124:CDS |
| GTTGAGAGCTATAAGGAGGC+TGG | 0.522498 | 4.1:-86755541 | MS.gene053124:CDS |
| TATGAGAATCACAAGGCAGA+TGG | 0.526023 | 4.1:-86756327 | MS.gene053124:CDS |
| TTGGAAATTCAGGCCATTGG+AGG | 0.526899 | 4.1:-86755581 | MS.gene053124:CDS |
| AAACTGAAGCTTACTTCGTA+GGG | 0.530500 | 4.1:+86756223 | None:intergenic |
| TCAATGAGTGTTTCCTCCAA+TGG | 0.543548 | 4.1:+86755568 | None:intergenic |
| AGGTGATAATGGAAACAAGT+GGG | 0.548517 | 4.1:-86759186 | None:intergenic |
| CAGGTTCTCTAACAGTTCCA+TGG | 0.559703 | 4.1:+86759068 | None:intergenic |
| GTGATTGAGCCTGCAGTGAA+GGG | 0.570026 | 4.1:-86757291 | MS.gene053124:CDS |
| TGCTGGCAGCTATATTGAGA+TGG | 0.571107 | 4.1:-86755647 | MS.gene053124:intron |
| ATTGGTCCCAAAACAAGAGT+AGG | 0.572490 | 4.1:+86756892 | None:intergenic |
| ATGAGAATCACAAGGCAGAT+GGG | 0.578597 | 4.1:-86756326 | MS.gene053124:CDS |
| GTGTGTGTAACTGGAGCAGG+AGG | 0.579894 | 4.1:-86759142 | MS.gene053124:CDS |
| GGTGATAATGGAAACAAGTG+GGG | 0.581540 | 4.1:-86759185 | None:intergenic |
| AGTGATTGAGCCTGCAGTGA+AGG | 0.582476 | 4.1:-86757292 | MS.gene053124:CDS |
| AAGGTACAGGGCTAGCAACA+TGG | 0.584108 | 4.1:+86757497 | None:intergenic |
| GGGTGTTAATAACAAGAAGA+AGG | 0.612023 | 4.1:-86759164 | MS.gene053124:CDS |
| GTACAACTGTTGAAGGTACA+GGG | 0.621515 | 4.1:+86757485 | None:intergenic |
| GCTTATTCTCCAATGAGTCA+TGG | 0.630654 | 4.1:+86756400 | None:intergenic |
| CTCTGTTGAGAGCTATAAGG+AGG | 0.642841 | 4.1:-86755545 | MS.gene053124:CDS |
| GAGGTGATAATGGAAACAAG+TGG | 0.644234 | 4.1:-86759187 | None:intergenic |
| AGCTTGTCTCAAAGCTAATG+TGG | 0.644451 | 4.1:-86757250 | MS.gene053124:CDS |
| AACAGTTGTACCTAATCCCG+AGG | 0.656125 | 4.1:-86757473 | MS.gene053124:intron |
| GAAAAGAACTGGACTTAACG+TGG | 0.670351 | 4.1:-86756926 | MS.gene053124:CDS |
| GTGATAATGGAAACAAGTGG+GGG | 0.680667 | 4.1:-86759184 | None:intergenic |
| TTTGGCTTATGAGAATCACA+AGG | 0.712000 | 4.1:-86756334 | MS.gene053124:CDS |
| TGTGTGTAACTGGAGCAGGA+GGG | 0.744318 | 4.1:-86759141 | MS.gene053124:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTATTAATATTTAATTAAAC+AGG | + | chr4.1:86758526-86758545 | None:intergenic | 10.0% |
| !!! | TTTTTAATAAGAATTTGATA+AGG | + | chr4.1:86757902-86757921 | None:intergenic | 10.0% |
| !! | AAGAATTTCATTACTATATA+TGG | - | chr4.1:86755810-86755829 | MS.gene053124:intron | 15.0% |
| !! | AAGTCATTAATTAATTAATG+AGG | - | chr4.1:86758685-86758704 | MS.gene053124:intron | 15.0% |
| !! | ACTATAACATAAGATTATAT+AGG | + | chr4.1:86759027-86759046 | None:intergenic | 15.0% |
| !!! | AAAGAATACAAAGTTTTTTT+GGG | - | chr4.1:86756191-86756210 | MS.gene053124:intron | 15.0% |
| !!! | ATAACATATTTTGAAACTTA+AGG | + | chr4.1:86757640-86757659 | None:intergenic | 15.0% |
| !! | AAGTAGGTAATATAGAAATA+TGG | + | chr4.1:86756921-86756940 | None:intergenic | 20.0% |
| !! | AGTAGGTAATATAGAAATAT+GGG | + | chr4.1:86756920-86756939 | None:intergenic | 20.0% |
| !! | CCAATGATAATTTGATAAAA+TGG | + | chr4.1:86758949-86758968 | None:intergenic | 20.0% |
| !! | TATCATTATCATGTAAAACA+AGG | + | chr4.1:86757961-86757980 | None:intergenic | 20.0% |
| !! | TGAAATTAGTTAAACTACAA+TGG | + | chr4.1:86758212-86758231 | None:intergenic | 20.0% |
| !!! | AAGCAAAGAATGTTTTTTTT+TGG | - | chr4.1:86756494-86756513 | MS.gene053124:intron | 20.0% |
| !!! | CAAAGAATACAAAGTTTTTT+TGG | - | chr4.1:86756190-86756209 | MS.gene053124:intron | 20.0% |
| !!! | CCATTTTATCAAATTATCAT+TGG | - | chr4.1:86758946-86758965 | MS.gene053124:intron | 20.0% |
| !!! | CTTTATCTTTTGGTAAATTA+GGG | + | chr4.1:86757519-86757538 | None:intergenic | 20.0% |
| !!! | TTGAAATTTTGCTAAAAAGT+AGG | + | chr4.1:86756937-86756956 | None:intergenic | 20.0% |
| ! | ACATCTCAGATATATTTACA+GGG | + | chr4.1:86756448-86756467 | None:intergenic | 25.0% |
| ! | ACTATATATGGAAAGAAACT+AGG | - | chr4.1:86755822-86755841 | MS.gene053124:intron | 25.0% |
| ! | CATAACTTCTATAAAATCCT+TGG | - | chr4.1:86757985-86758004 | MS.gene053124:intron | 25.0% |
| ! | GGTTGAAAATAAAATGCAAA+CGG | + | chr4.1:86756299-86756318 | None:intergenic | 25.0% |
| ! | TATCAAGCAAAAATACCTTT+AGG | + | chr4.1:86756256-86756275 | None:intergenic | 25.0% |
| ! | TGACAAATTAGTTCATGAAA+TGG | - | chr4.1:86756083-86756102 | MS.gene053124:intron | 25.0% |
| ! | TTGATATAACAGTAAGATCT+TGG | + | chr4.1:86755948-86755967 | None:intergenic | 25.0% |
| ! | TTTGTAACGCTAAATCAATT+TGG | - | chr4.1:86756042-86756061 | MS.gene053124:intron | 25.0% |
| !! | AGGATTTTATAGAAGTTATG+TGG | + | chr4.1:86757985-86758004 | None:intergenic | 25.0% |
| !! | GCTCTCATCAAAATTTTAAA+AGG | - | chr4.1:86757862-86757881 | MS.gene053124:intron | 25.0% |
| !! | GCTTTATCTTTTGGTAAATT+AGG | + | chr4.1:86757520-86757539 | None:intergenic | 25.0% |
| !! | TCATCTATTGCTTTATCTTT+TGG | + | chr4.1:86757529-86757548 | None:intergenic | 25.0% |
| !! | TTAATGAGGAGTATATGTAA+AGG | - | chr4.1:86758699-86758718 | MS.gene053124:intron | 25.0% |
| !!! | ACTTTGAAGAAAATTTTGAC+TGG | - | chr4.1:86756370-86756389 | MS.gene053124:CDS | 25.0% |
| !!! | TTTTAGCCTTTATAAGTGTA+TGG | - | chr4.1:86758048-86758067 | MS.gene053124:intron | 25.0% |
| !!! | TTTTTCAAAAGGTCATATAC+AGG | + | chr4.1:86756332-86756351 | None:intergenic | 25.0% |
| AACATGAACAATTTCGATGA+AGG | + | chr4.1:86757318-86757337 | None:intergenic | 30.0% | |
| AAGCAATAGATGAATCTTGT+TGG | - | chr4.1:86757536-86757555 | MS.gene053124:CDS | 30.0% | |
| AATTATGAATATGCCCTTCA+TGG | - | chr4.1:86758156-86758175 | MS.gene053124:intron | 30.0% | |
| ACCATAATTTCTGCATATGT+TGG | + | chr4.1:86755975-86755994 | None:intergenic | 30.0% | |
| ACCCTTTGTCTCTAATAAAA+GGG | + | chr4.1:86758573-86758592 | None:intergenic | 30.0% | |
| ATAATTTCTGCATATGTTGG+GGG | + | chr4.1:86755972-86755991 | None:intergenic | 30.0% | |
| ATGTGTCCAATTAGTGTTTA+AGG | - | chr4.1:86756464-86756483 | MS.gene053124:intron | 30.0% | |
| ATTAGTTAAACTACAATGGC+AGG | + | chr4.1:86758208-86758227 | None:intergenic | 30.0% | |
| ATTATCTACTTTGTCTGAGA+AGG | - | chr4.1:86756867-86756886 | MS.gene053124:CDS | 30.0% | |
| ATTATGAATATGCCCTTCAT+GGG | - | chr4.1:86758157-86758176 | MS.gene053124:intron | 30.0% | |
| ATTCATCTTGTCTTTCTTAG+AGG | - | chr4.1:86758276-86758295 | MS.gene053124:intron | 30.0% | |
| CAAGAGTCACTACAATTTAT+AGG | + | chr4.1:86756737-86756756 | None:intergenic | 30.0% | |
| CACATCTCAGATATATTTAC+AGG | + | chr4.1:86756449-86756468 | None:intergenic | 30.0% | |
| CATAATTTCTGCATATGTTG+GGG | + | chr4.1:86755973-86755992 | None:intergenic | 30.0% | |
| CCATAATTTCTGCATATGTT+GGG | + | chr4.1:86755974-86755993 | None:intergenic | 30.0% | |
| GAGATATCAATAACTGTATC+AGG | - | chr4.1:86758748-86758767 | MS.gene053124:intron | 30.0% | |
| TCAACAATCATACGACTATT+TGG | + | chr4.1:86756407-86756426 | None:intergenic | 30.0% | |
| TCTCTATTCTCTTATTCTTG+AGG | - | chr4.1:86757008-86757027 | MS.gene053124:intron | 30.0% | |
| TGCTCACTAGTTAAAAACTT+GGG | - | chr4.1:86756647-86756666 | MS.gene053124:intron | 30.0% | |
| TTCATCTTGTCTTTCTTAGA+GGG | - | chr4.1:86758277-86758296 | MS.gene053124:intron | 30.0% | |
| TTTAACTAGTGAGCAGATTA+TGG | + | chr4.1:86756642-86756661 | None:intergenic | 30.0% | |
| TTTGCATACAATTGTTGAAG+AGG | - | chr4.1:86756974-86756993 | MS.gene053124:CDS | 30.0% | |
| TTTGTGGTTGACTGTAAAAT+TGG | + | chr4.1:86757829-86757848 | None:intergenic | 30.0% | |
| ! | ACCCTTTTATTAGAGACAAA+GGG | - | chr4.1:86758569-86758588 | MS.gene053124:intron | 30.0% |
| ! | TATGTTATAGTTTTCCTTGC+TGG | - | chr4.1:86759036-86759055 | MS.gene053124:intron | 30.0% |
| !! | ATAAAAGGGTGCTTACATAT+AGG | + | chr4.1:86758559-86758578 | None:intergenic | 30.0% |
| !! | GCAAAAATACCTTTAGGATT+AGG | + | chr4.1:86756250-86756269 | None:intergenic | 30.0% |
| !! | GTTGTCTGTTTAAGATGTTT+TGG | + | chr4.1:86756787-86756806 | None:intergenic | 30.0% |
| !! | TAAAAGGGTGCTTACATATA+GGG | + | chr4.1:86758558-86758577 | None:intergenic | 30.0% |
| !!! | ATTTGTCCTACTCTTGTTTT+GGG | - | chr4.1:86757802-86757821 | MS.gene053124:intron | 30.0% |
| !!! | TTTTTTGCTGTCTTATGTAC+TGG | + | chr4.1:86755918-86755937 | None:intergenic | 30.0% |
| AAAAGGTCATATACAGGTCA+TGG | + | chr4.1:86756326-86756345 | None:intergenic | 35.0% | |
| AAACTGAAGCTTACTTCGTA+GGG | + | chr4.1:86758480-86758499 | None:intergenic | 35.0% | |
| AACACTTGTCGTATGAATGT+TGG | - | chr4.1:86756517-86756536 | MS.gene053124:intron | 35.0% | |
| AACATTAGAAACGTTACCTC+GGG | + | chr4.1:86757246-86757265 | None:intergenic | 35.0% | |
| AACCACAAATTCAAGTAGCT+TGG | - | chr4.1:86757840-86757859 | MS.gene053124:intron | 35.0% | |
| ACATACCTTAGAACACTTCT+TGG | + | chr4.1:86756142-86756161 | None:intergenic | 35.0% | |
| ACTCTTCAAAGCAGATATCT+TGG | - | chr4.1:86757134-86757153 | MS.gene053124:CDS | 35.0% | |
| ATGAGATGAGAAATAGTACC+AGG | + | chr4.1:86755654-86755673 | None:intergenic | 35.0% | |
| ATGGAAAGAAACTAGGCTTA+AGG | - | chr4.1:86755829-86755848 | MS.gene053124:intron | 35.0% | |
| CAAAACAAGAGTAGGACAAA+TGG | + | chr4.1:86757803-86757822 | None:intergenic | 35.0% | |
| CACCCTTTGTCTCTAATAAA+AGG | + | chr4.1:86758574-86758593 | None:intergenic | 35.0% | |
| CCCAACATATGCAGAAATTA+TGG | - | chr4.1:86755971-86755990 | MS.gene053124:intron | 35.0% | |
| CTGCTCACTAGTTAAAAACT+TGG | - | chr4.1:86756646-86756665 | MS.gene053124:intron | 35.0% | |
| CTTCTATAAAATCCTTGGTC+AGG | - | chr4.1:86757990-86758009 | MS.gene053124:intron | 35.0% | |
| GAACATTAGAAACGTTACCT+CGG | + | chr4.1:86757247-86757266 | None:intergenic | 35.0% | |
| GACACACCTTAAACACTAAT+TGG | + | chr4.1:86756473-86756492 | None:intergenic | 35.0% | |
| GGGTGTTAATAACAAGAAGA+AGG | - | chr4.1:86755536-86755555 | MS.gene053124:CDS | 35.0% | |
| GTATGGCCATACACTTATAA+AGG | + | chr4.1:86758057-86758076 | None:intergenic | 35.0% | |
| GTTAAGCTTCTTCTTTCCAA+AGG | - | chr4.1:86755600-86755619 | MS.gene053124:CDS | 35.0% | |
| TCAGAGAAACTGCAAAGTTT+GGG | - | chr4.1:86759096-86759115 | MS.gene053124:CDS | 35.0% | |
| TCAGTGTATAAATGCTTCTG+TGG | - | chr4.1:86755995-86756014 | MS.gene053124:intron | 35.0% | |
| TCCAACAATTGCAGAGTAAA+CGG | + | chr4.1:86757169-86757188 | None:intergenic | 35.0% | |
| TTATGAATATGCCCTTCATG+GGG | - | chr4.1:86758158-86758177 | MS.gene053124:intron | 35.0% | |
| TTCAATTTCGCGAAAAGAAC+TGG | - | chr4.1:86757763-86757782 | MS.gene053124:intron | 35.0% | |
| ! | ACATACCTTAGAGTACTTCT+TGG | + | chr4.1:86756165-86756184 | None:intergenic | 35.0% |
| ! | AGTTCTTTTCGCGAAATTGA+AGG | + | chr4.1:86757764-86757783 | None:intergenic | 35.0% |
| ! | ATATGAACACTTGCTGAAAC+TGG | - | chr4.1:86757089-86757108 | MS.gene053124:intron | 35.0% |
| ! | CACCCTTTTATTAGAGACAA+AGG | - | chr4.1:86758568-86758587 | MS.gene053124:intron | 35.0% |
| ! | TTTGGCTTATGAGAATCACA+AGG | - | chr4.1:86758366-86758385 | MS.gene053124:intron | 35.0% |
| !! | AAAGTTTGGGTTGGAAATTC+AGG | - | chr4.1:86759109-86759128 | MS.gene053124:CDS | 35.0% |
| !! | ACAAAGGGTGCTTACATATA+GGG | - | chr4.1:86758584-86758603 | MS.gene053124:intron | 35.0% |
| !! | CATTTGTCCTACTCTTGTTT+TGG | - | chr4.1:86757801-86757820 | MS.gene053124:intron | 35.0% |
| !! | CGTAGTTGATGCAATACTTT+TGG | - | chr4.1:86758348-86758367 | MS.gene053124:intron | 35.0% |
| !! | TATGTCCAAGAAGTACTCTA+AGG | - | chr4.1:86756157-86756176 | MS.gene053124:intron | 35.0% |
| !! | TGCTGAGCAGATTTTTCAAA+AGG | + | chr4.1:86756343-86756362 | None:intergenic | 35.0% |
| ACGGAGACATTTAATCCCAA+AGG | - | chr4.1:86756559-86756578 | MS.gene053124:intron | 40.0% | |
| AGAAACTAGGCTTAAGGACA+AGG | - | chr4.1:86755835-86755854 | MS.gene053124:intron | 40.0% | |
| AGAAACTGCAAAGTTTGGGT+TGG | - | chr4.1:86759100-86759119 | MS.gene053124:CDS | 40.0% | |
| AGACTACTGCAAAAACACTC+AGG | - | chr4.1:86757567-86757586 | MS.gene053124:CDS | 40.0% | |
| AGCCAAGCTACTTGAATTTG+TGG | + | chr4.1:86757845-86757864 | None:intergenic | 40.0% | |
| AGCTTGTCTCAAAGCTAATG+TGG | - | chr4.1:86757450-86757469 | MS.gene053124:intron | 40.0% | |
| ATATGAAGCACAGACACCTT+TGG | + | chr4.1:86756578-86756597 | None:intergenic | 40.0% | |
| ATGAGAATCACAAGGCAGAT+GGG | - | chr4.1:86758374-86758393 | MS.gene053124:intron | 40.0% | |
| ATTGGTCCCAAAACAAGAGT+AGG | + | chr4.1:86757811-86757830 | None:intergenic | 40.0% | |
| ATTGTCGAGTCATGAGAATG+AGG | - | chr4.1:86758774-86758793 | MS.gene053124:intron | 40.0% | |
| CACAGAGTTCTCACTTCATT+AGG | + | chr4.1:86756603-86756622 | None:intergenic | 40.0% | |
| CACTATCAACACACGAGATT+TGG | - | chr4.1:86758417-86758436 | MS.gene053124:intron | 40.0% | |
| CATTGGAGAATAAGCTTCGT+TGG | - | chr4.1:86758308-86758327 | MS.gene053124:intron | 40.0% | |
| CTCAGAGAAACTGCAAAGTT+TGG | - | chr4.1:86759095-86759114 | MS.gene053124:CDS | 40.0% | |
| GAAAAGAACTGGACTTAACG+TGG | - | chr4.1:86757774-86757793 | MS.gene053124:intron | 40.0% | |
| GAAACTGAAGCTTACTTCGT+AGG | + | chr4.1:86758481-86758500 | None:intergenic | 40.0% | |
| GCTTATTCTCCAATGAGTCA+TGG | + | chr4.1:86758303-86758322 | None:intergenic | 40.0% | |
| GGATTAGGTACAACTGTTGA+AGG | + | chr4.1:86757225-86757244 | None:intergenic | 40.0% | |
| GTATTCGAAGCTTAATCTGC+AGG | - | chr4.1:86757381-86757400 | MS.gene053124:intron | 40.0% | |
| GTTTCGATGCTACAAAGCAA+TGG | + | chr4.1:86758856-86758875 | None:intergenic | 40.0% | |
| TAATTTGATATGTCACCGCG+TGG | - | chr4.1:86757281-86757300 | MS.gene053124:CDS | 40.0% | |
| TATCAACACACGAGATTTGG+TGG | - | chr4.1:86758420-86758439 | MS.gene053124:intron | 40.0% | |
| TATGAAGCACAGACACCTTT+GGG | + | chr4.1:86756577-86756596 | None:intergenic | 40.0% | |
| TATGAATATGCCCTTCATGG+GGG | - | chr4.1:86758159-86758178 | MS.gene053124:intron | 40.0% | |
| TATGAGAATCACAAGGCAGA+TGG | - | chr4.1:86758373-86758392 | MS.gene053124:intron | 40.0% | |
| TCAATGAGTGTTTCCTCCAA+TGG | + | chr4.1:86759135-86759154 | None:intergenic | 40.0% | |
| TCATATACAGGTCATGGAGT+TGG | + | chr4.1:86756320-86756339 | None:intergenic | 40.0% | |
| TCCGTTTACTCTGCAATTGT+TGG | - | chr4.1:86757165-86757184 | MS.gene053124:CDS | 40.0% | |
| TGAAACACTGACACATTCAC+CGG | + | chr4.1:86758994-86759013 | None:intergenic | 40.0% | |
| TGACTCTGTTGAGAGCTATA+AGG | - | chr4.1:86759152-86759171 | MS.gene053124:CDS | 40.0% | |
| ! | AAGAAGAAGGTGTGTGTAAC+TGG | - | chr4.1:86755549-86755568 | MS.gene053124:CDS | 40.0% |
| ! | CTCACAAGAACTTGCTTAAC+AGG | + | chr4.1:86758731-86758750 | None:intergenic | 40.0% |
| ! | CTTTGTAGCATCGAAACTTC+AGG | - | chr4.1:86758859-86758878 | MS.gene053124:intron | 40.0% |
| ! | GTACAACTGTTGAAGGTACA+GGG | + | chr4.1:86757218-86757237 | None:intergenic | 40.0% |
| ! | TTCGTAGGGTACTTGTAGTT+GGG | + | chr4.1:86758466-86758485 | None:intergenic | 40.0% |
| ! | TTCTTGAGGTATGAGTGTTG+TGG | - | chr4.1:86757022-86757041 | MS.gene053124:intron | 40.0% |
| !! | ACCTTTAGGATTAGGTGTCT+CGG | + | chr4.1:86756242-86756261 | None:intergenic | 40.0% |
| !! | GACAAAGGGTGCTTACATAT+AGG | - | chr4.1:86758583-86758602 | MS.gene053124:intron | 40.0% |
| !! | TGTGTCCAAGAAGTGTTCTA+AGG | - | chr4.1:86756134-86756153 | MS.gene053124:intron | 40.0% |
| !! | TTAAAAGTGTCTCGTGTGTC+CGG | - | chr4.1:86758882-86758901 | MS.gene053124:intron | 40.0% |
| !!! | TGTCACTTCAGACTTTTTCG+TGG | + | chr4.1:86757355-86757374 | None:intergenic | 40.0% |
| AACAGTTGTACCTAATCCCG+AGG | - | chr4.1:86757227-86757246 | MS.gene053124:CDS | 45.0% | |
| AAGGCAAAACTAGAACCACG+CGG | + | chr4.1:86757299-86757318 | None:intergenic | 45.0% | |
| AATCCTTGGTCAGGTAACAG+TGG | - | chr4.1:86757999-86758018 | MS.gene053124:intron | 45.0% | |
| ACCGAGACACCTAATCCTAA+AGG | - | chr4.1:86756238-86756257 | MS.gene053124:CDS | 45.0% | |
| AGAAACGTTACCTCGGGATT+AGG | + | chr4.1:86757240-86757259 | None:intergenic | 45.0% | |
| AGTGCATGTCTAACAACTGC+AGG | - | chr4.1:86757057-86757076 | MS.gene053124:intron | 45.0% | |
| CAAGACAGAAGCAGAAGAAC+TGG | - | chr4.1:86757738-86757757 | MS.gene053124:intron | 45.0% | |
| CAGAGAAAAACCCCCATGAA+GGG | + | chr4.1:86758172-86758191 | None:intergenic | 45.0% | |
| CAGGTTCTCTAACAGTTCCA+TGG | + | chr4.1:86755635-86755654 | None:intergenic | 45.0% | |
| CAGTTCTTCTGCTTCTGTCT+TGG | + | chr4.1:86757740-86757759 | None:intergenic | 45.0% | |
| CATGGAACTGTTAGAGAACC+TGG | - | chr4.1:86755633-86755652 | MS.gene053124:CDS | 45.0% | |
| CTCTGTTGAGAGCTATAAGG+AGG | - | chr4.1:86759155-86759174 | MS.gene053124:CDS | 45.0% | |
| TCCAAAGGTTACGTTGTCCA+TGG | - | chr4.1:86755615-86755634 | MS.gene053124:CDS | 45.0% | |
| TCCATGGACAACGTAACCTT+TGG | + | chr4.1:86755619-86755638 | None:intergenic | 45.0% | |
| TCTCAATATAGCTGCCAGCA+AGG | + | chr4.1:86759053-86759072 | None:intergenic | 45.0% | |
| TGCTGGCAGCTATATTGAGA+TGG | - | chr4.1:86759053-86759072 | MS.gene053124:intron | 45.0% | |
| TGCTTACATATAGGGACGGA+GGG | - | chr4.1:86758592-86758611 | MS.gene053124:intron | 45.0% | |
| TGCTTACATATAGGGACGGA+GGG | + | chr4.1:86758611-86758592 | None:intergenic | 45.0% | |
| TTCGAAGCTTAATCTGCAGG+TGG | - | chr4.1:86757384-86757403 | MS.gene053124:intron | 45.0% | |
| TTGGAAATTCAGGCCATTGG+AGG | - | chr4.1:86759119-86759138 | MS.gene053124:CDS | 45.0% | |
| ! | AGGGTGCTTACATATAGGGA+CGG | - | chr4.1:86758588-86758607 | MS.gene053124:intron | 45.0% |
| ! | AGGGTGCTTACATATAGGGA+CGG | + | chr4.1:86758607-86758588 | None:intergenic | 45.0% |
| ! | CTTCGTAGGGTACTTGTAGT+TGG | + | chr4.1:86758467-86758486 | None:intergenic | 45.0% |
| ! | GGTACAACTGTTGAAGGTAC+AGG | + | chr4.1:86757219-86757238 | None:intergenic | 45.0% |
| !! | ATGCAGTGCTCTGGACTTTT+TGG | + | chr4.1:86756701-86756720 | None:intergenic | 45.0% |
| !! | TAAAAAAATTGAAAATTAAT+AGG | + | chr4.1:86755681-86755700 | None:intergenic | 5.0% |
| AAAACACGACTGCGGTGAAG+TGG | + | chr4.1:86758086-86758105 | None:intergenic | 50.0% | |
| AAACACGACTGCGGTGAAGT+GGG | + | chr4.1:86758085-86758104 | None:intergenic | 50.0% | |
| AAGGTGTGTGTAACTGGAGC+AGG | - | chr4.1:86755555-86755574 | MS.gene053124:CDS | 50.0% | |
| ACACCAACGCATGTAGGAGA+CGG | - | chr4.1:86756540-86756559 | MS.gene053124:intron | 50.0% | |
| ACACCACTGTTACCTGACCA+AGG | + | chr4.1:86758005-86758024 | None:intergenic | 50.0% | |
| ACTGACACATTCACCGGACA+CGG | + | chr4.1:86758988-86759007 | None:intergenic | 50.0% | |
| AGTGATTGAGCCTGCAGTGA+AGG | - | chr4.1:86757408-86757427 | MS.gene053124:intron | 50.0% | |
| CAGGAGGGTTTGTAGCATCA+TGG | - | chr4.1:86755574-86755593 | MS.gene053124:CDS | 50.0% | |
| CTGCAAGTAATGTTGCGCGA+TGG | - | chr4.1:86758807-86758826 | MS.gene053124:intron | 50.0% | |
| CTTAGAGGGCCATGACTCAT+TGG | - | chr4.1:86758291-86758310 | MS.gene053124:intron | 50.0% | |
| GCAGAGAAAAACCCCCATGA+AGG | + | chr4.1:86758173-86758192 | None:intergenic | 50.0% | |
| GGGTTGGAAATTCAGGCCAT+TGG | - | chr4.1:86759116-86759135 | MS.gene053124:CDS | 50.0% | |
| GTGATTGAGCCTGCAGTGAA+GGG | - | chr4.1:86757409-86757428 | MS.gene053124:intron | 50.0% | |
| GTGCTTACATATAGGGACGG+AGG | - | chr4.1:86758591-86758610 | MS.gene053124:intron | 50.0% | |
| GTGCTTACATATAGGGACGG+AGG | + | chr4.1:86758610-86758591 | None:intergenic | 50.0% | |
| GTTGAGAGCTATAAGGAGGC+TGG | - | chr4.1:86759159-86759178 | MS.gene053124:CDS | 50.0% | |
| TAGTGTGTCAGTACCGTGTC+CGG | - | chr4.1:86758972-86758991 | MS.gene053124:intron | 50.0% | |
| TGTGTGTAACTGGAGCAGGA+GGG | - | chr4.1:86755559-86755578 | MS.gene053124:CDS | 50.0% | |
| TGTTGGACACCAACGCATGT+AGG | - | chr4.1:86756534-86756553 | MS.gene053124:intron | 50.0% | |
| TTAGCAGTTCCCTTCACTGC+AGG | + | chr4.1:86757421-86757440 | None:intergenic | 50.0% | |
| ! | AAGGTACAGGGCTAGCAACA+TGG | + | chr4.1:86757206-86757225 | None:intergenic | 50.0% |
| ! | ACTTCACCGCAGTCGTGTTT+TGG | - | chr4.1:86758085-86758104 | MS.gene053124:intron | 50.0% |
| ! | CTTCACCGCAGTCGTGTTTT+GGG | - | chr4.1:86758086-86758105 | MS.gene053124:intron | 50.0% |
| ! | TGTCAGTACCGAGTCAATGC+CGG | + | chr4.1:86758904-86758923 | None:intergenic | 50.0% |
| !! | AAGTCCAGAGCACTGCATAC+AGG | - | chr4.1:86756703-86756722 | MS.gene053124:intron | 50.0% |
| CCAACCTGTATGCAGTGCTC+TGG | + | chr4.1:86756710-86756729 | None:intergenic | 55.0% | |
| CGACTCCCAAAACACGACTG+CGG | + | chr4.1:86758094-86758113 | None:intergenic | 55.0% | |
| GTGTGTGTAACTGGAGCAGG+AGG | - | chr4.1:86755558-86755577 | MS.gene053124:CDS | 55.0% | |
| TCTCCGTCTCCTACATGCGT+TGG | + | chr4.1:86756546-86756565 | None:intergenic | 55.0% | |
| !! | CCAGAGCACTGCATACAGGT+TGG | - | chr4.1:86756707-86756726 | MS.gene053124:intron | 55.0% |
| !! | CGGTGAAGTGGGTTGTGGTA+TGG | + | chr4.1:86758074-86758093 | None:intergenic | 55.0% |
| !! | TCGTGTGTCCGGCATTGACT+CGG | - | chr4.1:86758893-86758912 | MS.gene053124:intron | 55.0% |
| !!! | CGCAGTCGTGTTTTGGGAGT+CGG | - | chr4.1:86758092-86758111 | MS.gene053124:intron | 55.0% |
| CTTCGCACGTGACGCAGAAC+TGG | - | chr4.1:86757704-86757723 | MS.gene053124:intron | 60.0% | |
| !! | GACTGCGGTGAAGTGGGTTG+TGG | + | chr4.1:86758079-86758098 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 86755522 | 86759200 | 86755522 | ID=MS.gene053124 |
| chr4.1 | mRNA | 86755522 | 86759200 | 86755522 | ID=MS.gene053124.t1;Parent=MS.gene053124 |
| chr4.1 | exon | 86759068 | 86759200 | 86759068 | ID=MS.gene053124.t1.exon1;Parent=MS.gene053124.t1 |
| chr4.1 | CDS | 86759068 | 86759200 | 86759068 | ID=cds.MS.gene053124.t1;Parent=MS.gene053124.t1 |
| chr4.1 | exon | 86757474 | 86757643 | 86757474 | ID=MS.gene053124.t1.exon2;Parent=MS.gene053124.t1 |
| chr4.1 | CDS | 86757474 | 86757643 | 86757474 | ID=cds.MS.gene053124.t1;Parent=MS.gene053124.t1 |
| chr4.1 | exon | 86757134 | 86757319 | 86757134 | ID=MS.gene053124.t1.exon3;Parent=MS.gene053124.t1 |
| chr4.1 | CDS | 86757134 | 86757319 | 86757134 | ID=cds.MS.gene053124.t1;Parent=MS.gene053124.t1 |
| chr4.1 | exon | 86756839 | 86757001 | 86756839 | ID=MS.gene053124.t1.exon4;Parent=MS.gene053124.t1 |
| chr4.1 | CDS | 86756839 | 86757001 | 86756839 | ID=cds.MS.gene053124.t1;Parent=MS.gene053124.t1 |
| chr4.1 | exon | 86756237 | 86756426 | 86756237 | ID=MS.gene053124.t1.exon5;Parent=MS.gene053124.t1 |
| chr4.1 | CDS | 86756237 | 86756426 | 86756237 | ID=cds.MS.gene053124.t1;Parent=MS.gene053124.t1 |
| chr4.1 | exon | 86755522 | 86755660 | 86755522 | ID=MS.gene053124.t1.exon6;Parent=MS.gene053124.t1 |
| chr4.1 | CDS | 86755522 | 86755660 | 86755522 | ID=cds.MS.gene053124.t1;Parent=MS.gene053124.t1 |
| Gene Sequence |
| Protein sequence |
