AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene053503

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053503.t1 MTR_4g086160 90.558 233 20 2 1 233 1 231 5.52e-143 399
MS.gene053503.t1 MTR_4g086190 76.754 228 50 2 8 233 4 230 2.47e-118 337
MS.gene053503.t1 MTR_4g086220 76.250 240 42 4 1 233 3 234 3.02e-111 319
MS.gene053503.t1 MTR_4g086165 71.489 235 29 10 7 233 4 208 6.63e-101 291
MS.gene053503.t1 MTR_8g092460 70.588 68 20 0 87 154 134 201 7.71e-30 113
MS.gene053503.t1 MTR_7g020980 56.322 87 32 1 74 154 21 107 8.40e-30 109
MS.gene053503.t1 MTR_2g105380 55.556 99 40 2 85 182 103 198 2.17e-29 113
MS.gene053503.t1 MTR_7g021010 69.231 65 20 0 90 154 43 107 2.40e-29 108
MS.gene053503.t1 MTR_7g021010 70.769 65 19 0 90 154 4 68 2.53e-29 107
MS.gene053503.t1 MTR_3g090760 54.369 103 38 3 96 196 111 206 2.23e-28 110
MS.gene053503.t1 MTR_1g087920 42.331 163 69 6 88 229 67 225 2.37e-28 109
MS.gene053503.t1 MTR_2g435590 76.562 64 14 1 92 154 89 152 4.39e-28 107
MS.gene053503.t1 MTR_8g022820 60.000 80 32 0 75 154 100 179 7.70e-28 109
MS.gene053503.t1 MTR_8g022820 60.000 80 32 0 75 154 101 180 8.82e-28 108
MS.gene053503.t1 MTR_8g022820 60.000 80 32 0 75 154 101 180 8.82e-28 108
MS.gene053503.t1 MTR_5g009620 81.034 58 11 0 96 153 110 167 1.38e-27 107
MS.gene053503.t1 MTR_2g014340 68.750 64 20 0 98 161 19 82 5.11e-26 100
MS.gene053503.t1 MTR_1g070070 67.606 71 22 1 85 154 8 78 7.60e-26 98.6
MS.gene053503.t1 MTR_4g078710 67.692 65 21 0 98 162 28 92 8.55e-26 100
MS.gene053503.t1 MTR_2g078680 67.143 70 21 1 87 154 18 87 1.17e-25 99.8
MS.gene053503.t1 MTR_1g028560 39.548 177 74 7 46 203 48 210 5.12e-25 101
MS.gene053503.t1 MTR_2g015040 70.968 62 17 1 94 154 59 120 8.85e-25 96.3
MS.gene053503.t1 MTR_3g053690 68.852 61 19 0 95 155 24 84 1.79e-24 97.1
MS.gene053503.t1 MTR_5g085100 65.625 64 22 0 97 160 45 108 4.62e-24 97.4
MS.gene053503.t1 MTR_2g015050 62.319 69 25 1 88 155 124 192 4.74e-24 97.4
MS.gene053503.t1 MTR_4g100420 66.667 69 22 1 88 155 147 215 9.44e-24 97.1
MS.gene053503.t1 MTR_1g048610 42.537 134 70 3 26 155 17 147 1.37e-23 95.1
MS.gene053503.t1 MTR_4g100450 66.667 69 22 1 88 155 144 212 1.84e-23 96.3
MS.gene053503.t1 MTR_3g098580 45.000 140 44 4 15 154 26 132 2.14e-23 95.1
MS.gene053503.t1 MTR_4g088005 67.213 61 19 1 95 154 54 114 2.82e-23 91.3
MS.gene053503.t1 MTR_8g099215 72.414 58 16 0 96 153 105 162 2.88e-23 95.9
MS.gene053503.t1 MTR_7g081815 60.274 73 28 1 96 167 59 131 5.73e-23 92.8
MS.gene053503.t1 MTR_4g100380 64.789 71 24 1 86 155 133 203 6.11e-23 94.0
MS.gene053503.t1 MTR_7g096700 64.384 73 25 1 83 154 5 77 7.81e-23 90.5
MS.gene053503.t1 MTR_7g081805 60.274 73 28 1 96 167 59 131 8.37e-23 92.4
MS.gene053503.t1 MTR_3g095190 73.913 69 18 0 86 154 158 226 9.27e-23 95.1
MS.gene053503.t1 MTR_8g006840 69.355 62 17 2 98 157 125 186 9.40e-23 92.0
MS.gene053503.t1 MTR_5g085070 62.500 64 24 0 97 160 50 113 1.06e-22 94.0
MS.gene053503.t1 MTR_1g090290 59.155 71 28 1 86 155 101 171 1.15e-22 91.7
MS.gene053503.t1 MTR_4g054740 52.083 96 33 4 95 177 94 189 2.04e-22 92.0
MS.gene053503.t1 MTR_7g081795 66.667 60 19 1 96 154 58 117 2.17e-22 91.3
MS.gene053503.t1 MTR_8g006825 52.874 87 35 3 96 180 94 176 4.68e-22 90.5
MS.gene053503.t1 MTR_8g090350 64.516 62 22 0 93 154 108 169 5.68e-22 92.0
MS.gene053503.t1 MTR_7g096750 61.842 76 22 2 86 154 2 77 6.56e-22 88.2
MS.gene053503.t1 MTR_5g083340 63.077 65 24 0 92 156 79 143 6.73e-22 93.2
MS.gene053503.t1 MTR_4g008860 59.677 62 25 0 93 154 3 64 7.56e-22 89.7
MS.gene053503.t1 MTR_1g074310 67.797 59 18 1 97 154 20 78 8.08e-22 88.2
MS.gene053503.t1 MTR_3g074130 61.429 70 23 1 93 162 145 210 9.47e-22 92.0
MS.gene053503.t1 MTR_4g114570 64.062 64 23 0 96 159 5 68 1.15e-21 89.4
MS.gene053503.t1 MTR_1g090170 63.235 68 21 1 96 163 150 213 1.16e-21 91.7
MS.gene053503.t1 MTR_4g010640 66.129 62 21 0 96 157 5 66 1.20e-21 89.4
MS.gene053503.t1 MTR_8g006815 62.500 64 22 2 96 157 94 157 1.32e-21 89.0
MS.gene053503.t1 MTR_2g438180 57.692 78 30 2 86 162 2 77 1.45e-21 87.0
MS.gene053503.t1 MTR_1g090170 63.235 68 21 1 96 163 237 300 1.78e-21 92.0
MS.gene053503.t1 MTR_5g082950 66.102 59 20 0 95 153 63 121 2.04e-21 91.3
MS.gene053503.t1 MTR_3g102100 52.174 69 33 0 86 154 33 101 2.63e-21 87.4
MS.gene053503.t1 MTR_2g089170 48.454 97 49 1 98 194 65 160 2.87e-21 87.8
MS.gene053503.t1 MTR_1g074230 71.186 59 16 1 97 154 18 76 3.39e-21 86.3
MS.gene053503.t1 MTR_5g062700 64.516 62 22 0 93 154 168 229 3.75e-21 90.9
MS.gene053503.t1 MTR_2g014300 68.421 57 18 0 98 154 15 71 4.89e-21 86.7
MS.gene053503.t1 MTR_5g075570 56.522 69 30 0 93 161 119 187 6.00e-21 89.0
MS.gene053503.t1 MTR_7g092190 63.793 58 21 0 97 154 29 86 6.08e-21 89.0
MS.gene053503.t1 MTR_7g046260 50.617 81 33 1 87 160 43 123 6.30e-21 88.2
MS.gene053503.t1 MTR_8g102800 41.414 99 54 1 66 160 1 99 7.29e-21 87.8
MS.gene053503.t1 MTR_4g054360 63.768 69 22 2 98 163 124 192 9.14e-21 88.2
MS.gene053503.t1 MTR_2g103700 65.000 60 21 0 96 155 5 64 1.08e-20 85.9
MS.gene053503.t1 MTR_6g088405 58.730 63 26 0 98 160 44 106 1.33e-20 86.7
MS.gene053503.t1 MTR_1g019110 59.016 61 25 0 94 154 40 100 1.42e-20 85.9
MS.gene053503.t1 MTR_2g101340 43.878 98 37 2 81 160 6 103 2.04e-20 85.9
MS.gene053503.t1 MTR_3g106290 59.677 62 25 0 93 154 3 64 2.91e-20 85.1
MS.gene053503.t1 MTR_2g090235 66.102 59 20 0 96 154 216 274 3.57e-20 88.6
MS.gene053503.t1 MTR_4g054860 59.722 72 26 2 95 163 128 199 4.66e-20 86.7
MS.gene053503.t1 MTR_1g069985 54.118 85 35 3 84 164 60 144 4.87e-20 85.1
MS.gene053503.t1 MTR_2g016730 55.882 68 30 0 88 155 13 80 7.70e-20 86.7
MS.gene053503.t1 MTR_4g100650 63.158 57 21 0 98 154 74 130 7.97e-20 85.5
MS.gene053503.t1 MTR_5g016750 54.098 61 28 0 94 154 21 81 1.07e-19 83.6
MS.gene053503.t1 MTR_4g082345 55.882 68 30 0 92 159 42 109 1.33e-19 85.9
MS.gene053503.t1 MTR_1g070015 57.534 73 28 2 95 164 81 153 1.52e-19 84.0
MS.gene053503.t1 MTR_7g011630 58.730 63 26 0 91 153 35 97 1.67e-19 87.0
MS.gene053503.t1 MTR_8g069360 61.667 60 23 0 94 153 40 99 2.99e-19 85.9
MS.gene053503.t1 MTR_0939s0010 62.903 62 23 0 98 159 65 126 3.00e-19 82.8
MS.gene053503.t1 MTR_6g012970 58.065 62 26 0 92 153 32 93 3.07e-19 85.9
MS.gene053503.t1 MTR_1g070020 53.750 80 34 2 88 164 60 139 4.29e-19 82.8
MS.gene053503.t1 MTR_2g019750 53.623 69 32 0 85 153 37 105 5.80e-19 84.0
MS.gene053503.t1 MTR_4g119270 50.685 73 36 0 85 157 40 112 6.36e-19 84.3
MS.gene053503.t1 MTR_8g085960 53.425 73 31 1 84 153 8 80 7.19e-19 82.4
MS.gene053503.t1 MTR_3g110205 38.525 122 70 3 98 218 43 160 8.23e-19 81.3
MS.gene053503.t1 MTR_7g096810 67.188 64 20 1 92 154 7 70 8.27e-19 79.7
MS.gene053503.t1 MTR_1g070000 58.824 68 25 2 100 164 86 153 9.46e-19 82.0
MS.gene053503.t1 MTR_1g074250 66.667 60 18 1 97 154 18 77 9.61e-19 79.7
MS.gene053503.t1 MTR_8g006410 46.988 83 37 1 85 160 32 114 1.29e-18 81.3
MS.gene053503.t1 MTR_5g012910 49.367 79 37 1 85 160 12 90 1.30e-18 80.5
MS.gene053503.t1 MTR_5g032820 64.912 57 20 0 97 153 45 101 1.41e-18 83.6
MS.gene053503.t1 MTR_8g023680 62.264 53 20 0 92 144 110 162 1.60e-18 83.6
MS.gene053503.t1 MTR_5g083330 59.091 66 27 0 89 154 26 91 1.77e-18 82.4
MS.gene053503.t1 MTR_6g033255 65.278 72 25 0 95 166 17 88 1.83e-18 80.9
MS.gene053503.t1 MTR_8g013860 55.556 63 28 0 98 160 47 109 1.86e-18 80.9
MS.gene053503.t1 MTR_1g070035 56.164 73 29 2 95 164 74 146 2.03e-18 80.9
MS.gene053503.t1 MTR_1g069960 72.881 59 15 1 97 154 26 84 2.21e-18 79.3
MS.gene053503.t1 MTR_1g070045 54.667 75 31 2 93 164 61 135 3.87e-18 79.0
MS.gene053503.t1 MTR_4g111915 56.250 64 28 0 95 158 50 113 4.16e-18 78.2
MS.gene053503.t1 MTR_1g014860 55.932 59 26 0 96 154 20 78 4.80e-18 80.1
MS.gene053503.t1 MTR_1g014820 55.932 59 26 0 96 154 25 83 4.81e-18 80.9
MS.gene053503.t1 MTR_1g069940 52.083 96 33 3 95 177 92 187 6.04e-18 80.1
MS.gene053503.t1 MTR_8g032610 52.941 68 32 0 89 156 18 85 6.36e-18 81.3
MS.gene053503.t1 MTR_7g070220 60.317 63 18 1 98 153 78 140 6.44e-18 82.4
MS.gene053503.t1 MTR_6g029180 52.703 74 33 1 80 153 17 88 6.59e-18 81.3
MS.gene053503.t1 MTR_4g112490 53.521 71 33 0 88 158 43 113 6.87e-18 79.3
MS.gene053503.t1 MTR_1g014800 52.381 63 30 0 92 154 25 87 7.10e-18 79.7
MS.gene053503.t1 MTR_7g084370 64.912 57 20 0 97 153 41 97 7.21e-18 80.5
MS.gene053503.t1 MTR_7g117690 54.386 57 26 0 98 154 28 84 1.24e-17 77.8
MS.gene053503.t1 MTR_1g014780 55.932 59 26 0 96 154 36 94 1.43e-17 79.0
MS.gene053503.t1 MTR_7g085810 59.649 57 23 0 97 153 29 85 1.51e-17 79.3
MS.gene053503.t1 MTR_1g069945 52.083 96 33 3 95 177 98 193 2.55e-17 78.6
MS.gene053503.t1 MTR_7g096780 40.580 138 67 4 92 214 79 216 4.89e-17 77.4
MS.gene053503.t1 MTR_8g027465 54.386 57 26 0 98 154 39 95 1.48e-16 75.1
MS.gene053503.t1 MTR_1g040430 65.385 52 17 1 105 155 118 169 2.37e-16 75.1
MS.gene053503.t1 MTR_4g035430 46.269 67 36 0 88 154 22 88 2.89e-16 75.1
MS.gene053503.t1 MTR_1g074370 44.628 121 44 4 93 201 68 177 5.55e-16 74.3
MS.gene053503.t1 MTR_7g096830 60.759 79 25 3 88 163 91 166 6.24e-16 74.7
MS.gene053503.t1 MTR_1g110970 52.632 57 27 0 89 145 88 144 7.02e-16 75.9
MS.gene053503.t1 MTR_1g101600 48.101 79 33 1 83 153 18 96 1.04e-15 73.2
MS.gene053503.t1 MTR_1g097190 47.887 71 34 1 89 156 14 84 1.09e-15 71.6
MS.gene053503.t1 MTR_3g017420 60.000 50 20 0 105 154 2 51 1.19e-15 69.7
MS.gene053503.t1 MTR_1g043350 55.696 79 32 2 88 163 72 150 1.25e-15 73.6
MS.gene053503.t1 MTR_1g006660 54.321 81 32 1 85 160 29 109 1.34e-15 73.9
MS.gene053503.t1 MTR_1g105400 51.786 56 27 0 89 144 106 161 1.53e-15 75.1
MS.gene053503.t1 MTR_3g105510 49.180 61 31 0 93 153 32 92 1.68e-15 73.6
MS.gene053503.t1 MTR_2g043050 54.386 57 26 0 98 154 19 75 2.17e-15 72.8
MS.gene053503.t1 MTR_2g043030 54.386 57 26 0 98 154 19 75 2.69e-15 72.4
MS.gene053503.t1 MTR_6g465530 58.929 56 23 0 98 153 33 88 4.18e-15 71.6
MS.gene053503.t1 MTR_6g465690 42.157 102 43 3 68 153 17 118 4.37e-15 72.8
MS.gene053503.t1 MTR_8g023700 53.704 54 25 0 91 144 110 163 5.22e-15 73.6
MS.gene053503.t1 MTR_3g112440 46.154 104 49 2 98 196 39 140 6.34e-15 71.6
MS.gene053503.t1 MTR_6g465510 57.143 56 24 0 98 153 33 88 1.08e-14 70.9
MS.gene053503.t1 MTR_6g466130 50.000 72 30 1 88 153 50 121 1.16e-14 70.9
MS.gene053503.t1 MTR_6g037610 80.000 50 10 0 105 154 187 236 1.32e-14 72.4
MS.gene053503.t1 MTR_1g098460 80.000 50 10 0 105 154 146 195 1.53e-14 72.0
MS.gene053503.t1 MTR_1g012470 62.295 61 23 0 95 155 4 64 2.10e-14 69.7
MS.gene053503.t1 MTR_6g088425 46.154 91 35 1 84 160 21 111 2.44e-14 70.1
MS.gene053503.t1 MTR_1g023170 58.209 67 28 0 88 154 30 96 2.67e-14 70.5
MS.gene053503.t1 MTR_6g465430 51.389 72 26 1 91 153 38 109 2.96e-14 70.1
MS.gene053503.t1 MTR_5g008540 50.000 62 31 0 100 161 26 87 3.61e-14 66.6
MS.gene053503.t1 MTR_6g466000 50.000 72 30 1 88 153 41 112 3.68e-14 69.7
MS.gene053503.t1 MTR_2g043040 52.632 57 27 0 98 154 19 75 4.00e-14 69.7
MS.gene053503.t1 MTR_6g465460 50.000 72 27 1 91 153 38 109 4.80e-14 70.1
MS.gene053503.t1 MTR_6g466020 47.222 72 32 1 88 153 27 98 5.00e-14 68.2
MS.gene053503.t1 MTR_5g008590 57.143 63 27 0 98 160 11 73 5.40e-14 68.6
MS.gene053503.t1 MTR_6g465850 55.357 56 25 0 98 153 63 118 5.52e-14 69.7
MS.gene053503.t1 MTR_6g465450 48.611 72 28 1 91 153 38 109 5.85e-14 69.3
MS.gene053503.t1 MTR_7g028925 52.542 59 25 1 96 154 27 82 8.35e-14 65.5
MS.gene053503.t1 MTR_3g107380 65.000 60 21 0 96 155 6 65 1.02e-13 68.2
MS.gene053503.t1 MTR_2g043020 43.478 69 39 0 86 154 7 75 1.58e-13 67.4
MS.gene053503.t1 MTR_4g102670 54.386 57 25 1 98 154 15 70 2.38e-13 66.2
MS.gene053503.t1 MTR_3g072610 44.330 97 44 3 84 171 4 99 2.41e-13 67.4
MS.gene053503.t1 MTR_5g009410 66.667 60 20 0 95 154 114 173 4.29e-13 67.8
MS.gene053503.t1 MTR_6g465420 55.357 56 25 0 98 153 54 109 4.61e-13 67.0
MS.gene053503.t1 MTR_5g085125 47.826 69 36 0 97 165 15 83 7.14e-13 65.1
MS.gene053503.t1 MTR_5g008790 50.820 61 28 1 96 154 16 76 9.89e-13 64.3
MS.gene053503.t1 MTR_5g053920 36.975 119 59 5 97 205 65 177 2.03e-12 66.2
MS.gene053503.t1 MTR_3g105480 50.000 54 27 0 100 153 33 86 3.10e-12 64.3
MS.gene053503.t1 MTR_5g008470 47.826 69 31 1 97 160 69 137 3.93e-12 63.2
MS.gene053503.t1 MTR_5g057810 57.143 49 21 0 97 145 87 135 6.09e-12 64.3
MS.gene053503.t1 MTR_5g057647 57.143 49 21 0 97 145 87 135 6.09e-12 64.3
MS.gene053503.t1 MTR_5g058470 56.452 62 26 1 95 155 93 154 7.93e-12 63.9
MS.gene053503.t1 MTR_1g093600 39.048 105 43 3 48 152 33 116 1.17e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053503.t1 AT4G34410 46.486 185 56 3 8 157 19 195 1.93e-38 134
MS.gene053503.t1 AT5G67000 43.056 144 66 2 9 152 48 175 8.82e-32 115
MS.gene053503.t1 AT2G47520 74.648 71 17 1 84 154 37 106 6.77e-31 112
MS.gene053503.t1 AT2G33710 71.642 67 19 0 88 154 60 126 3.14e-29 109
MS.gene053503.t1 AT2G33710 71.642 67 19 0 88 154 60 126 3.57e-29 109
MS.gene053503.t1 AT4G11140 79.661 59 12 0 96 154 85 143 8.14e-29 110
MS.gene053503.t1 AT5G13330 75.000 60 15 0 95 154 36 95 1.15e-28 107
MS.gene053503.t1 AT5G61890 41.497 147 64 3 8 154 22 146 3.00e-28 107
MS.gene053503.t1 AT3G16770 70.769 65 19 0 90 154 71 135 7.60e-28 106
MS.gene053503.t1 AT4G23750 57.471 87 18 1 86 153 91 177 9.73e-27 105
MS.gene053503.t1 AT4G23750 57.471 87 18 1 86 153 91 177 9.73e-27 105
MS.gene053503.t1 AT4G27950 74.576 59 15 0 95 153 115 173 2.88e-26 104
MS.gene053503.t1 AT1G72360 65.625 64 22 0 91 154 18 81 6.24e-26 100
MS.gene053503.t1 AT5G44210 68.657 67 21 0 93 159 28 94 9.48e-26 100
MS.gene053503.t1 AT1G72360 65.625 64 22 0 91 154 69 132 1.21e-25 101
MS.gene053503.t1 AT1G03800 61.429 70 27 0 87 156 42 111 1.23e-25 100
MS.gene053503.t1 AT1G72360 65.625 64 22 0 91 154 67 130 1.28e-25 101
MS.gene053503.t1 AT1G43160 51.128 133 49 4 22 154 1 117 4.79e-25 97.8
MS.gene053503.t1 AT5G47230 54.737 95 42 1 62 155 120 214 8.85e-25 99.8
MS.gene053503.t1 AT3G15210 72.414 58 16 0 97 154 24 81 1.01e-24 97.8
MS.gene053503.t1 AT1G28370 72.414 58 16 0 97 154 57 114 1.20e-24 97.1
MS.gene053503.t1 AT5G51190 64.384 73 23 2 91 162 65 135 1.30e-24 97.4
MS.gene053503.t1 AT5G53290 71.667 60 17 0 96 155 123 182 1.70e-24 99.8
MS.gene053503.t1 AT1G28370 72.414 58 16 0 97 154 19 76 2.19e-24 95.5
MS.gene053503.t1 AT3G61630 72.414 58 16 0 96 153 103 160 1.29e-23 97.1
MS.gene053503.t1 AT4G28140 45.455 121 46 2 94 194 139 259 2.03e-23 95.9
MS.gene053503.t1 AT4G17490 72.581 62 16 1 95 155 134 195 4.51e-23 94.7
MS.gene053503.t1 AT5G47220 72.131 61 16 1 96 155 115 175 6.16e-23 93.6
MS.gene053503.t1 AT5G50080 72.222 72 16 1 83 154 75 142 7.22e-23 93.2
MS.gene053503.t1 AT5G50080 72.222 72 16 1 83 154 66 133 8.37e-23 92.8
MS.gene053503.t1 AT4G17500 72.131 61 16 1 96 155 146 206 9.89e-23 93.6
MS.gene053503.t1 AT2G22200 60.870 69 26 1 93 160 66 134 9.99e-23 93.6
MS.gene053503.t1 AT1G50640 67.797 59 19 0 97 155 27 85 1.01e-22 92.8
MS.gene053503.t1 AT2G44840 51.020 98 36 3 84 171 69 164 1.09e-22 92.4
MS.gene053503.t1 AT4G39780 64.615 65 23 0 90 154 85 149 1.32e-22 93.2
MS.gene053503.t1 AT1G22190 60.274 73 25 1 93 165 78 146 1.61e-22 92.8
MS.gene053503.t1 AT3G20310 67.797 59 19 0 97 155 26 84 1.67e-22 92.4
MS.gene053503.t1 AT2G20350 43.066 137 60 2 13 149 20 138 2.11e-22 90.1
MS.gene053503.t1 AT5G07310 76.667 60 14 0 95 154 89 148 2.18e-22 92.4
MS.gene053503.t1 AT1G78080 38.667 150 83 2 15 163 76 217 2.47e-22 93.6
MS.gene053503.t1 AT1G22985 66.197 71 19 2 95 160 72 142 2.48e-22 89.7
MS.gene053503.t1 AT5G43410 72.881 59 15 1 97 154 14 72 2.61e-22 89.0
MS.gene053503.t1 AT1G36060 64.062 64 23 0 93 156 138 201 3.04e-22 93.2
MS.gene053503.t1 AT2G31230 58.333 84 32 2 84 164 72 155 3.51e-22 91.7
MS.gene053503.t1 AT4G13620 65.152 66 23 0 96 161 230 295 3.57e-22 94.0
MS.gene053503.t1 AT5G61600 65.574 61 20 1 96 155 86 146 4.16e-22 91.3
MS.gene053503.t1 AT3G23240 45.000 120 45 5 92 201 76 184 4.86e-22 90.5
MS.gene053503.t1 AT1G15360 66.667 60 20 0 96 155 5 64 5.28e-22 90.1
MS.gene053503.t1 AT1G15360 66.667 60 20 0 96 155 5 64 5.28e-22 90.1
MS.gene053503.t1 AT5G65130 38.194 144 68 4 96 222 109 248 1.65e-21 90.5
MS.gene053503.t1 AT1G71130 56.180 89 31 2 90 173 71 156 1.80e-21 87.8
MS.gene053503.t1 AT5G65130 38.194 144 68 4 96 222 111 250 1.87e-21 90.5
MS.gene053503.t1 AT2G20880 67.213 61 20 0 94 154 183 243 2.66e-21 90.9
MS.gene053503.t1 AT3G23230 69.492 59 17 1 97 154 19 77 2.80e-21 86.7
MS.gene053503.t1 AT5G05410 66.129 62 21 0 98 159 79 140 2.80e-21 90.5
MS.gene053503.t1 AT4G06746 59.322 59 24 0 96 154 34 92 3.33e-21 86.7
MS.gene053503.t1 AT5G25190 59.677 62 25 0 93 154 3 64 3.74e-21 87.4
MS.gene053503.t1 AT5G05410 66.129 62 21 0 98 159 79 140 4.44e-21 90.1
MS.gene053503.t1 AT4G32800 53.521 71 33 0 84 154 5 75 5.30e-21 87.8
MS.gene053503.t1 AT2G23340 56.250 64 28 0 91 154 21 84 6.87e-21 86.7
MS.gene053503.t1 AT1G28360 67.241 58 19 0 97 154 11 68 7.74e-21 86.7
MS.gene053503.t1 AT1G75490 62.500 64 21 1 98 161 42 102 8.26e-21 87.0
MS.gene053503.t1 AT1G46768 60.000 60 24 0 95 154 28 87 9.12e-21 85.1
MS.gene053503.t1 AT5G25390 62.295 61 23 0 96 156 5 65 9.25e-21 86.7
MS.gene053503.t1 AT1G46768 60.000 60 24 0 95 154 28 87 1.02e-20 85.5
MS.gene053503.t1 AT1G46768 60.000 60 24 0 95 154 28 87 1.02e-20 85.5
MS.gene053503.t1 AT3G16280 64.912 57 20 0 98 154 61 117 1.03e-20 87.4
MS.gene053503.t1 AT3G16280 64.912 57 20 0 98 154 79 135 1.11e-20 87.8
MS.gene053503.t1 AT2G46310 60.294 68 27 0 86 153 87 154 1.49e-20 88.2
MS.gene053503.t1 AT5G64750 76.000 50 12 0 105 154 192 241 1.51e-20 89.4
MS.gene053503.t1 AT5G11590 50.000 82 36 1 84 160 32 113 1.62e-20 87.0
MS.gene053503.t1 AT5G07580 63.934 61 21 1 96 155 108 168 1.66e-20 86.3
MS.gene053503.t1 AT4G36900 53.968 63 29 0 92 154 24 86 1.98e-20 85.9
MS.gene053503.t1 AT5G13910 54.054 74 34 0 84 157 6 79 3.90e-20 85.5
MS.gene053503.t1 AT3G57600 62.069 58 22 0 97 154 27 84 4.78e-20 86.7
MS.gene053503.t1 AT4G18450 67.742 62 18 2 96 155 108 169 9.59e-20 86.3
MS.gene053503.t1 AT5G25810 55.556 72 30 1 85 154 21 92 1.25e-19 84.3
MS.gene053503.t1 AT1G71450 50.649 77 38 0 84 160 10 86 1.27e-19 83.6
MS.gene053503.t1 AT5G19790 56.522 69 30 0 85 153 9 77 1.33e-19 85.1
MS.gene053503.t1 AT4G16750 46.739 92 44 2 84 173 24 112 1.36e-19 83.2
MS.gene053503.t1 AT5G67010 36.066 122 56 3 13 131 21 123 1.96e-19 82.4
MS.gene053503.t1 AT5G67190 52.381 63 30 0 92 154 15 77 2.08e-19 82.8
MS.gene053503.t1 AT2G35700 53.623 69 29 1 98 166 45 110 3.08e-19 82.8
MS.gene053503.t1 AT2G25820 61.404 57 22 0 98 154 26 82 3.25e-19 83.2
MS.gene053503.t1 AT2G40340 38.525 122 72 2 98 216 72 193 3.50e-19 84.7
MS.gene053503.t1 AT1G21910 56.140 57 25 0 98 154 50 106 3.56e-19 83.2
MS.gene053503.t1 AT1G12980 64.912 57 20 0 97 153 56 112 3.81e-19 84.7
MS.gene053503.t1 AT2G44940 61.404 57 22 0 98 154 100 156 4.00e-19 84.3
MS.gene053503.t1 AT5G25390 60.656 61 21 1 96 156 5 62 4.46e-19 82.0
MS.gene053503.t1 AT3G50260 53.846 65 29 1 90 154 14 77 4.51e-19 81.3
MS.gene053503.t1 AT3G11020 63.158 57 21 0 98 154 78 134 7.45e-19 84.0
MS.gene053503.t1 AT5G18560 54.286 70 31 1 85 153 41 110 1.33e-18 83.6
MS.gene053503.t1 AT5G18450 45.361 97 45 2 57 153 1 89 1.64e-18 82.8
MS.gene053503.t1 AT2G40340 42.857 105 57 2 98 199 14 118 1.82e-18 82.4
MS.gene053503.t1 AT2G40340 42.857 105 57 2 98 199 14 118 1.82e-18 82.4
MS.gene053503.t1 AT2G40340 42.857 105 57 2 98 199 14 118 1.82e-18 82.4
MS.gene053503.t1 AT3G60490 59.649 57 23 0 98 154 71 127 2.39e-18 81.6
MS.gene053503.t1 AT1G74930 50.000 70 35 0 85 154 8 77 3.40e-18 79.7
MS.gene053503.t1 AT1G24590 64.912 57 20 0 97 153 57 113 4.29e-18 81.6
MS.gene053503.t1 AT2G40340 42.857 105 57 2 98 199 79 183 4.32e-18 82.0
MS.gene053503.t1 AT1G01250 46.053 76 38 1 98 173 45 117 4.65e-18 79.3
MS.gene053503.t1 AT1G12890 57.746 71 26 1 87 153 6 76 5.46e-18 79.7
MS.gene053503.t1 AT1G53910 63.514 74 25 1 88 161 115 186 6.93e-18 81.6
MS.gene053503.t1 AT1G53910 63.514 74 25 1 88 161 115 186 6.93e-18 81.6
MS.gene053503.t1 AT2G40340 42.857 105 57 2 98 199 72 176 7.02e-18 81.6
MS.gene053503.t1 AT1G53910 63.514 74 25 1 88 161 113 184 7.39e-18 81.6
MS.gene053503.t1 AT2G40350 57.627 59 25 0 98 156 74 132 8.78e-18 78.2
MS.gene053503.t1 AT5G21960 57.377 61 26 0 94 154 3 63 9.89e-18 79.0
MS.gene053503.t1 AT2G40350 57.627 59 25 0 98 156 67 125 1.01e-17 77.8
MS.gene053503.t1 AT3G14230 66.667 72 23 1 84 154 109 180 1.14e-17 81.3
MS.gene053503.t1 AT3G14230 66.667 72 23 1 84 154 108 179 1.18e-17 81.3
MS.gene053503.t1 AT3G14230 66.667 72 23 1 84 154 113 184 1.25e-17 81.3
MS.gene053503.t1 AT1G28160 60.656 61 24 0 97 157 38 98 2.51e-17 78.6
MS.gene053503.t1 AT5G51990 42.727 110 51 2 91 191 38 144 3.50e-17 77.8
MS.gene053503.t1 AT1G06160 62.500 72 24 2 96 164 80 151 5.47e-17 77.8
MS.gene053503.t1 AT4G25470 56.061 66 29 0 88 153 41 106 7.74e-17 76.6
MS.gene053503.t1 AT4G25490 54.545 66 30 0 88 153 38 103 1.25e-16 76.3
MS.gene053503.t1 AT1G19210 53.333 60 28 0 95 154 9 68 1.70e-16 75.1
MS.gene053503.t1 AT1G68550 66.000 50 17 0 95 144 110 159 1.71e-16 77.4
MS.gene053503.t1 AT1G68550 66.000 50 17 0 95 144 110 159 1.71e-16 77.4
MS.gene053503.t1 AT3G23220 66.667 66 21 1 97 161 13 78 2.36e-16 73.6
MS.gene053503.t1 AT4G31060 50.000 64 32 0 91 154 20 83 2.51e-16 74.7
MS.gene053503.t1 AT1G77200 57.353 68 29 0 87 154 32 99 3.24e-16 75.5
MS.gene053503.t1 AT2G36450 49.333 75 34 2 98 171 15 86 3.96e-16 73.9
MS.gene053503.t1 AT4G25480 53.030 66 31 0 88 153 41 106 6.00e-16 74.3
MS.gene053503.t1 AT1G53170 61.111 72 24 1 85 156 22 89 1.56e-15 72.4
MS.gene053503.t1 AT5G61590 41.791 134 69 5 27 155 36 165 3.65e-15 72.0
MS.gene053503.t1 AT2G40220 58.824 68 28 0 86 153 43 110 6.01e-15 73.2
MS.gene053503.t1 AT1G04370 71.186 59 16 1 97 154 19 77 6.04e-15 69.7
MS.gene053503.t1 AT5G11190 56.944 72 29 1 96 165 5 76 2.22e-14 69.3
MS.gene053503.t1 AT1G77640 45.783 83 42 1 92 171 37 119 3.35e-14 70.1
MS.gene053503.t1 AT2G38340 59.091 66 19 1 97 154 69 134 5.48e-14 69.3
MS.gene053503.t1 AT1G63030 48.649 74 29 1 89 153 12 85 5.73e-14 68.2
MS.gene053503.t1 AT1G63030 48.649 74 29 1 89 153 12 85 5.73e-14 68.2
MS.gene053503.t1 AT1G64380 64.516 62 22 0 93 154 131 192 9.10e-14 69.7
MS.gene053503.t1 AT1G22810 44.304 79 41 2 94 169 10 88 9.57e-14 66.6
MS.gene053503.t1 AT1G12610 44.595 74 32 1 89 153 12 85 3.52e-13 66.6
MS.gene053503.t1 AT3G25890 62.222 45 17 0 100 144 133 177 1.06e-12 66.6
MS.gene053503.t1 AT3G25890 62.222 45 17 0 100 144 133 177 1.06e-12 66.6
MS.gene053503.t1 AT1G44830 52.941 68 31 1 96 162 33 100 2.04e-12 64.7
MS.gene053503.t1 AT1G71520 42.500 80 41 2 95 169 11 90 2.21e-12 63.2
MS.gene053503.t1 AT1G33760 57.377 61 25 1 98 157 20 80 3.38e-12 63.5
MS.gene053503.t1 AT1G49120 59.574 47 19 0 98 144 87 133 4.35e-12 65.1
MS.gene053503.t1 AT1G68840 48.529 68 33 1 91 158 58 123 7.47e-11 61.6
MS.gene053503.t1 AT1G68840 48.529 68 33 1 91 158 58 123 7.47e-11 61.6
MS.gene053503.t1 AT1G13260 31.034 145 83 4 61 195 22 159 9.15e-11 61.2
MS.gene053503.t1 AT1G80580 41.322 121 53 4 63 165 66 186 9.98e-11 60.5

Find 72 sgRNAs with CRISPR-Local

Find 84 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACAACTTATGAGGTTTA+TGG 0.166648 4.3:-26725356 MS.gene053503:CDS
CTGGAGATTCTTCTGGTTCT+AGG 0.189683 4.3:-26725327 MS.gene053503:CDS
ACTGAAACAACGACGGGGTT+TGG 0.299562 4.3:-26725427 MS.gene053503:CDS
CTGAAACAACGACGGGGTTT+GGG 0.326627 4.3:-26725426 MS.gene053503:CDS
CTGCTTCCGATGGTGGAATC+CGG 0.331036 4.3:+26725850 None:intergenic
GACGGGGTTTGGGAATAATA+AGG 0.342374 4.3:-26725416 MS.gene053503:CDS
CTGGTTCCTCAACATGCTTA+AGG 0.353177 4.3:+26725509 None:intergenic
CGAGACGCGCGGTCCGTGTT+TGG 0.355772 4.3:-26725639 MS.gene053503:CDS
TGGTTCCTCAACATGCTTAA+GGG 0.366696 4.3:+26725510 None:intergenic
GGAATCCGGGAGATGAAATT+CGG 0.367751 4.3:+26725864 None:intergenic
TCCTTCTGAGCATGTAATAA+AGG 0.379967 4.3:-26725476 MS.gene053503:CDS
TGCAACATAGCAGGATGTTT+AGG 0.384768 4.3:-26725772 MS.gene053503:CDS
CCGCAGGTTTCCATGTTTGT+TGG 0.386204 4.3:+26725799 None:intergenic
TCAGAAGGAACGATCACTTC+TGG 0.416956 4.3:+26725490 None:intergenic
AGCCGGAGACTACGTTGGTT+AGG 0.429315 4.3:+26725911 None:intergenic
AGCTTCGTCCGCCGTGGTAA+AGG 0.430635 4.3:+26725609 None:intergenic
GGTAGATGAGAAGGAGGAAG+AGG 0.439044 4.3:+26725975 None:intergenic
GCTGCTGCTGCTTCCGATGG+TGG 0.447949 4.3:+26725843 None:intergenic
CCATCGAGTTTCGTGGGCCG+AGG 0.449745 4.3:-26725564 MS.gene053503:CDS
CAGGTTTCCATGTTTGTTGG+TGG 0.450418 4.3:+26725802 None:intergenic
GGGTAATGAATTTGCGGTTG+AGG 0.456997 4.3:+26725885 None:intergenic
GCCGGAGACTACGTTGGTTA+GGG 0.457969 4.3:+26725912 None:intergenic
GATTCTTCTGGTTCTAGGAC+AGG 0.461736 4.3:-26725322 MS.gene053503:CDS
CGCGCGGTCCGTGTTTGGCT+CGG 0.469233 4.3:-26725634 MS.gene053503:CDS
GGTGAGAGTGGTAGATGAGA+AGG 0.470589 4.3:+26725966 None:intergenic
ATTACCCGAATTTCATCTCC+CGG 0.478489 4.3:-26725869 MS.gene053503:CDS
GAGAGTGGTAGATGAGAAGG+AGG 0.480674 4.3:+26725969 None:intergenic
AAACACGGACCGCGCGTCTC+GGG 0.486832 4.3:+26725641 None:intergenic
GAATCCGGGAGATGAAATTC+GGG 0.490345 4.3:+26725865 None:intergenic
TGCTTCCGATGGTGGAATCC+GGG 0.490588 4.3:+26725851 None:intergenic
AATGCGGCCATCGAGTTTCG+TGG 0.491719 4.3:-26725571 MS.gene053503:CDS
GGCCGCATTGTCGTAAGCTC+TGG 0.499146 4.3:+26725585 None:intergenic
AAATTCGGGTAATGAATTTG+CGG 0.501466 4.3:+26725879 None:intergenic
CATCTCCCGGATTCCACCAT+CGG 0.506770 4.3:-26725856 MS.gene053503:CDS
CAAACACGGACCGCGCGTCT+CGG 0.508554 4.3:+26725640 None:intergenic
GAGGAGTGAGGCAGAGACCA+TGG 0.509182 4.3:-26725690 MS.gene053503:CDS
TGCGGTGAATGCAACATAGC+AGG 0.510509 4.3:-26725781 MS.gene053503:CDS
TGCTATGTTGCATTCACCGC+AGG 0.510695 4.3:+26725783 None:intergenic
AGGAGTGAGGCAGAGACCAT+GGG 0.517170 4.3:-26725689 MS.gene053503:CDS
ATTTGCGGTTGAGGTGGAGC+CGG 0.534829 4.3:+26725894 None:intergenic
TCCTTTATTACATGCTCAGA+AGG 0.537729 4.3:+26725475 None:intergenic
AACAAGTGGAAAATTGAGCT+TGG 0.538551 4.3:+26725540 None:intergenic
ATGCAAACTGAAACAACGAC+GGG 0.552098 4.3:-26725433 MS.gene053503:CDS
CAGCAGCAGCATAGAACGAA+TGG 0.557723 4.3:-26725827 MS.gene053503:CDS
AATGACGGATTGTTCTTGAT+CGG 0.558070 4.3:+26725942 None:intergenic
AATGGTTCCACCAACAAACA+TGG 0.558564 4.3:-26725809 MS.gene053503:CDS
GGAAAATTGAGCTTGGCCCT+CGG 0.559126 4.3:+26725547 None:intergenic
TAATGAATTTGCGGTTGAGG+TGG 0.566894 4.3:+26725888 None:intergenic
CATCGAGTTTCGTGGGCCGA+GGG 0.576337 4.3:-26725563 MS.gene053503:CDS
ATGCGGCCATCGAGTTTCGT+GGG 0.585219 4.3:-26725570 MS.gene053503:CDS
TTCTTGATCGGAGGTGAGAG+TGG 0.585977 4.3:+26725954 None:intergenic
CCTCGGCCCACGAAACTCGA+TGG 0.588120 4.3:+26725564 None:intergenic
GACGGATTGTTCTTGATCGG+AGG 0.593092 4.3:+26725945 None:intergenic
GGTTAGGGCGGTGACAATGA+CGG 0.595527 4.3:+26725927 None:intergenic
GCCCTAACCAACGTAGTCTC+CGG 0.597309 4.3:-26725913 MS.gene053503:CDS
TGAATCCCTTAAGCATGTTG+AGG 0.603976 4.3:-26725515 MS.gene053503:CDS
ATTCTTCTGGTTCTAGGACA+GGG 0.611454 4.3:-26725321 MS.gene053503:CDS
GGAGTGAGGCAGAGACCATG+GGG 0.630795 4.3:-26725688 MS.gene053503:CDS
TAAAGGTTCCGAGCCAAACA+CGG 0.637276 4.3:+26725626 None:intergenic
TCTGGCAGCTTCGTCCGCCG+TGG 0.641928 4.3:+26725603 None:intergenic
GATTCGTGACCCGAGACGCG+CGG 0.647313 4.3:-26725650 MS.gene053503:CDS
GGAGACTACGTTGGTTAGGG+CGG 0.662337 4.3:+26725915 None:intergenic
TGCCAGAGCTTACGACAATG+CGG 0.672825 4.3:-26725587 MS.gene053503:CDS
AAAAGAAGTATAGAGGAGTG+AGG 0.676652 4.3:-26725702 MS.gene053503:CDS
TTGGCTCGGAACCTTTACCA+CGG 0.679817 4.3:-26725620 MS.gene053503:CDS
TTAAGGGATTCATCAACAAG+TGG 0.686073 4.3:+26725526 None:intergenic
AATGCAAACTGAAACAACGA+CGG 0.691452 4.3:-26725434 MS.gene053503:CDS
GGTGGAGCCGGAGACTACGT+TGG 0.701148 4.3:+26725906 None:intergenic
CCAACAAACATGGAAACCTG+CGG 0.705953 4.3:-26725799 MS.gene053503:CDS
GCTCGGAACCTTTACCACGG+CGG 0.707292 4.3:-26725617 MS.gene053503:CDS
GAGTGAGGCAGAGACCATGG+GGG 0.735515 4.3:-26725687 MS.gene053503:CDS
TGCAAACTGAAACAACGACG+GGG 0.757079 4.3:-26725432 MS.gene053503:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATAAGGATTGTGATTTTT+TGG - chr4.3:26725890-26725909 MS.gene053503:CDS 20.0%
!!! GTGATTTTTTGGATAGTATT+GGG - chr4.3:26725901-26725920 MS.gene053503:CDS 25.0%
!!! TGATTTTTTGGATAGTATTG+GGG - chr4.3:26725902-26725921 MS.gene053503:CDS 25.0%
!!! TGTGATTTTTTGGATAGTAT+TGG - chr4.3:26725900-26725919 MS.gene053503:CDS 25.0%
AAATTCGGGTAATGAATTTG+CGG + chr4.3:26725415-26725434 None:intergenic 30.0%
TCAACAACTTATGAGGTTTA+TGG - chr4.3:26725935-26725954 MS.gene053503:CDS 30.0%
! AGAGCTAAAAAGAAGTATAG+AGG - chr4.3:26725582-26725601 MS.gene053503:CDS 30.0%
! ATGAGGTTTATGGAATTTTC+TGG - chr4.3:26725945-26725964 MS.gene053503:CDS 30.0%
! CTGATTTTCAACAACTTATG+AGG - chr4.3:26725928-26725947 MS.gene053503:CDS 30.0%
AACAAGTGGAAAATTGAGCT+TGG + chr4.3:26725754-26725773 None:intergenic 35.0%
AATGCAAACTGAAACAACGA+CGG - chr4.3:26725857-26725876 MS.gene053503:CDS 35.0%
TCCTTCTGAGCATGTAATAA+AGG - chr4.3:26725815-26725834 MS.gene053503:CDS 35.0%
TCCTTTATTACATGCTCAGA+AGG + chr4.3:26725819-26725838 None:intergenic 35.0%
TTAAGGGATTCATCAACAAG+TGG + chr4.3:26725768-26725787 None:intergenic 35.0%
! AAAAGAAGTATAGAGGAGTG+AGG - chr4.3:26725589-26725608 MS.gene053503:CDS 35.0%
!! AATGACGGATTGTTCTTGAT+CGG + chr4.3:26725352-26725371 None:intergenic 35.0%
!! GAATTTTCTGGAGATTCTTC+TGG - chr4.3:26725957-26725976 MS.gene053503:CDS 35.0%
AATGGTTCCACCAACAAACA+TGG - chr4.3:26725482-26725501 MS.gene053503:CDS 40.0%
ATGCAAACTGAAACAACGAC+GGG - chr4.3:26725858-26725877 MS.gene053503:CDS 40.0%
ATTACCCGAATTTCATCTCC+CGG - chr4.3:26725422-26725441 MS.gene053503:CDS 40.0%
TAATGAATTTGCGGTTGAGG+TGG + chr4.3:26725406-26725425 None:intergenic 40.0%
TGAATCCCTTAAGCATGTTG+AGG - chr4.3:26725776-26725795 MS.gene053503:CDS 40.0%
TGCAACATAGCAGGATGTTT+AGG - chr4.3:26725519-26725538 MS.gene053503:CDS 40.0%
TGGTTCCTCAACATGCTTAA+GGG + chr4.3:26725784-26725803 None:intergenic 40.0%
!! ATTCTTCTGGTTCTAGGACA+GGG - chr4.3:26725970-26725989 MS.gene053503:CDS 40.0%
CCAACAAACATGGAAACCTG+CGG - chr4.3:26725492-26725511 MS.gene053503:CDS 45.0%
CTGGTTCCTCAACATGCTTA+AGG + chr4.3:26725785-26725804 None:intergenic 45.0%
GAATCCGGGAGATGAAATTC+GGG + chr4.3:26725429-26725448 None:intergenic 45.0%
GACGGGGTTTGGGAATAATA+AGG - chr4.3:26725875-26725894 MS.gene053503:CDS 45.0%
GGAATCCGGGAGATGAAATT+CGG + chr4.3:26725430-26725449 None:intergenic 45.0%
GGGTAATGAATTTGCGGTTG+AGG + chr4.3:26725409-26725428 None:intergenic 45.0%
TAAAGGTTCCGAGCCAAACA+CGG + chr4.3:26725668-26725687 None:intergenic 45.0%
TCAGAAGGAACGATCACTTC+TGG + chr4.3:26725804-26725823 None:intergenic 45.0%
TGCAAACTGAAACAACGACG+GGG - chr4.3:26725859-26725878 MS.gene053503:CDS 45.0%
! CAGGTTTCCATGTTTGTTGG+TGG + chr4.3:26725492-26725511 None:intergenic 45.0%
!! CTGGAGATTCTTCTGGTTCT+AGG - chr4.3:26725964-26725983 MS.gene053503:CDS 45.0%
!! GATTCTTCTGGTTCTAGGAC+AGG - chr4.3:26725969-26725988 MS.gene053503:CDS 45.0%
ACTGAAACAACGACGGGGTT+TGG - chr4.3:26725864-26725883 MS.gene053503:CDS 50.0%
CAGCAGCAGCATAGAACGAA+TGG - chr4.3:26725464-26725483 MS.gene053503:CDS 50.0%
CCGCAGGTTTCCATGTTTGT+TGG + chr4.3:26725495-26725514 None:intergenic 50.0%
CTGAAACAACGACGGGGTTT+GGG - chr4.3:26725865-26725884 MS.gene053503:CDS 50.0%
GAGAGTGGTAGATGAGAAGG+AGG + chr4.3:26725325-26725344 None:intergenic 50.0%
GGAAAATTGAGCTTGGCCCT+CGG + chr4.3:26725747-26725766 None:intergenic 50.0%
GGTAGATGAGAAGGAGGAAG+AGG + chr4.3:26725319-26725338 None:intergenic 50.0%
GGTGAGAGTGGTAGATGAGA+AGG + chr4.3:26725328-26725347 None:intergenic 50.0%
TGCCAGAGCTTACGACAATG+CGG - chr4.3:26725704-26725723 MS.gene053503:CDS 50.0%
TGCGGTGAATGCAACATAGC+AGG - chr4.3:26725510-26725529 MS.gene053503:CDS 50.0%
TGCTATGTTGCATTCACCGC+AGG + chr4.3:26725511-26725530 None:intergenic 50.0%
TTCTTGATCGGAGGTGAGAG+TGG + chr4.3:26725340-26725359 None:intergenic 50.0%
!! GACGGATTGTTCTTGATCGG+AGG + chr4.3:26725349-26725368 None:intergenic 50.0%
!! TTGGCTCGGAACCTTTACCA+CGG - chr4.3:26725671-26725690 MS.gene053503:CDS 50.0%
AATGCGGCCATCGAGTTTCG+TGG - chr4.3:26725720-26725739 MS.gene053503:CDS 55.0%
AGGAGTGAGGCAGAGACCAT+GGG - chr4.3:26725602-26725621 MS.gene053503:CDS 55.0%
ATGCGGCCATCGAGTTTCGT+GGG - chr4.3:26725721-26725740 MS.gene053503:CDS 55.0%
ATTTGCGGTTGAGGTGGAGC+CGG + chr4.3:26725400-26725419 None:intergenic 55.0%
CATCTCCCGGATTCCACCAT+CGG - chr4.3:26725435-26725454 MS.gene053503:CDS 55.0%
GCAGAGACCATGGGGGAAAT+GGG - chr4.3:26725611-26725630 MS.gene053503:CDS 55.0%
GCCCTAACCAACGTAGTCTC+CGG - chr4.3:26725378-26725397 MS.gene053503:CDS 55.0%
GGTTAGGGCGGTGACAATGA+CGG + chr4.3:26725367-26725386 None:intergenic 55.0%
! AGCCGGAGACTACGTTGGTT+AGG + chr4.3:26725383-26725402 None:intergenic 55.0%
! GCCGGAGACTACGTTGGTTA+GGG + chr4.3:26725382-26725401 None:intergenic 55.0%
! GGAGACTACGTTGGTTAGGG+CGG + chr4.3:26725379-26725398 None:intergenic 55.0%
!! CTGCTTCCGATGGTGGAATC+CGG + chr4.3:26725444-26725463 None:intergenic 55.0%
!! TGCTTCCGATGGTGGAATCC+GGG + chr4.3:26725443-26725462 None:intergenic 55.0%
AGCTTCGTCCGCCGTGGTAA+AGG + chr4.3:26725685-26725704 None:intergenic 60.0%
CATCGAGTTTCGTGGGCCGA+GGG - chr4.3:26725728-26725747 MS.gene053503:CDS 60.0%
GAGGAGTGAGGCAGAGACCA+TGG - chr4.3:26725601-26725620 MS.gene053503:CDS 60.0%
GAGTGAGGCAGAGACCATGG+GGG - chr4.3:26725604-26725623 MS.gene053503:CDS 60.0%
GCTCGGAACCTTTACCACGG+CGG - chr4.3:26725674-26725693 MS.gene053503:CDS 60.0%
GGAGTGAGGCAGAGACCATG+GGG - chr4.3:26725603-26725622 MS.gene053503:CDS 60.0%
GGCAGAGACCATGGGGGAAA+TGG - chr4.3:26725610-26725629 MS.gene053503:CDS 60.0%
GGCCGCATTGTCGTAAGCTC+TGG + chr4.3:26725709-26725728 None:intergenic 60.0%
TCAGCAGCCCATTTCCCCCA+TGG + chr4.3:26725621-26725640 None:intergenic 60.0%
AAACACGGACCGCGCGTCTC+GGG + chr4.3:26725653-26725672 None:intergenic 65.0%
CAAACACGGACCGCGCGTCT+CGG + chr4.3:26725654-26725673 None:intergenic 65.0%
CCATCGAGTTTCGTGGGCCG+AGG - chr4.3:26725727-26725746 MS.gene053503:CDS 65.0%
CCTCGGCCCACGAAACTCGA+TGG + chr4.3:26725730-26725749 None:intergenic 65.0%
GATTCGTGACCCGAGACGCG+CGG - chr4.3:26725641-26725660 MS.gene053503:CDS 65.0%
GGTGGAGCCGGAGACTACGT+TGG + chr4.3:26725388-26725407 None:intergenic 65.0%
! GCTGCTGCTGCTGCTTCCGA+TGG + chr4.3:26725454-26725473 None:intergenic 65.0%
! GCTGCTGCTGCTTCCGATGG+TGG + chr4.3:26725451-26725470 None:intergenic 65.0%
CGAGACGCGCGGTCCGTGTT+TGG - chr4.3:26725652-26725671 MS.gene053503:CDS 70.0%
CGCGCGGTCCGTGTTTGGCT+CGG - chr4.3:26725657-26725676 MS.gene053503:CDS 70.0%
TCTGGCAGCTTCGTCCGCCG+TGG + chr4.3:26725691-26725710 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 26725306 26726007 26725306 ID=MS.gene053503
chr4.3 mRNA 26725306 26726007 26725306 ID=MS.gene053503.t1;Parent=MS.gene053503
chr4.3 exon 26725306 26726007 26725306 ID=MS.gene053503.t1.exon1;Parent=MS.gene053503.t1
chr4.3 CDS 26725306 26726007 26725306 ID=cds.MS.gene053503.t1;Parent=MS.gene053503.t1
Gene Sequence

>MS.gene053503

ATGAACAACTCCTCTTCCTCCTTCTCATCTACCACTCTCACCTCCGATCAAGAACAATCCGTCATTGTCACCGCCCTAACCAACGTAGTCTCCGGCTCCACCTCAACCGCAAATTCATTACCCGAATTTCATCTCCCGGATTCCACCATCGGAAGCAGCAGCAGCAGCATAGAACGAATGGTTCCACCAACAAACATGGAAACCTGCGGTGAATGCAACATAGCAGGATGTTTAGGATGCAATTTCTTCTCTGAAGAGAACAAGAAAAAACAAAAGAGAGCTAAAAAGAAGTATAGAGGAGTGAGGCAGAGACCATGGGGGAAATGGGCTGCTGAGATTCGTGACCCGAGACGCGCGGTCCGTGTTTGGCTCGGAACCTTTACCACGGCGGACGAAGCTGCCAGAGCTTACGACAATGCGGCCATCGAGTTTCGTGGGCCGAGGGCCAAGCTCAATTTTCCACTTGTTGATGAATCCCTTAAGCATGTTGAGGAACCAGAAGTGATCGTTCCTTCTGAGCATGTAATAAAGGATGAGAATATGAATCAAGAAATGCAAACTGAAACAACGACGGGGTTTGGGAATAATAAGGATTGTGATTTTTTGGATAGTATTGGGGATGCTGATTTTCAACAACTTATGAGGTTTATGGAATTTTCTGGAGATTCTTCTGGTTCTAGGACAGGGAATACTTTTAATTAG
Protein sequence

>MS.gene053503.t1

MNNSSSSFSSTTLTSDQEQSVIVTALTNVVSGSTSTANSLPEFHLPDSTIGSSSSSIERMVPPTNMETCGECNIAGCLGCNFFSEENKKKQKRAKKKYRGVRQRPWGKWAAEIRDPRRAVRVWLGTFTTADEAARAYDNAAIEFRGPRAKLNFPLVDESLKHVEEPEVIVPSEHVIKDENMNQEMQTETTTGFGNNKDCDFLDSIGDADFQQLMRFMEFSGDSSGSRTGNTFN