AlfalfaGEDB | MS.gene053499

M. sativa cultivar XinJiangDaYe / MS.gene053499

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00847.23

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053499.t1	XP_003607980.1	85.4	233	30	3	1	231	1	231	2.20E-100	375.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053499.t1	Q9SZ06	45.8	179	57	4	10	155	24	195	3.0e-29	130.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053499.t1	G7JL90	85.4	233	30	3	1	231	1	231	1.6e-100	375.2

TFs/TRs:

Gene ID	Type	Classification
MS.gene053499.t1	TF	AP2/ERF-ERF

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene051837	MS.gene053499	0.839201	1.83E-57	-1.69E-46
MS.gene053499	MS.gene053501	0.826437	2.71E-54	-1.69E-46
MS.gene053499	MS.gene053503	0.813937	1.99E-51	-1.69E-46
MS.gene053499	MS.gene072828	0.803175	3.95E-49	-1.69E-46
MS.gene053499	MS.gene072829	0.800631	1.32E-48	-1.69E-46
MS.gene053499	MS.gene24855	0.823877	1.09E-53	-1.69E-46
MS.gene053499	MS.gene24856	0.839354	1.67E-57	-1.69E-46
MS.gene053499	MS.gene26630	0.894915	1.57E-75	-1.69E-46
MS.gene053499	MS.gene26632	0.829975	3.81E-55	-1.69E-46
MS.gene053499	MS.gene26633	0.825194	5.35E-54	-1.69E-46
MS.gene053499	MS.gene35487	0.995379	1.09E-215	-1.69E-46
MS.gene053499	MS.gene39643	0.916658	1.37E-85	-1.69E-46
MS.gene053499	MS.gene39645	0.825891	3.66E-54	-1.69E-46
MS.gene053499	MS.gene57601	0.815318	9.83E-52	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053499.t1	MTR_4g086190	90.129	233	19	3	1	231	1	231	2.50e-140	392
MS.gene053499.t1	MTR_4g086160	77.130	223	47	3	9	230	12	231	4.11e-113	323
MS.gene053499.t1	MTR_4g086165	74.153	236	27	8	1	230	1	208	8.33e-107	306
MS.gene053499.t1	MTR_4g086220	71.250	240	51	6	1	230	3	234	3.46e-104	301
MS.gene053499.t1	MTR_7g021010	44.030	134	48	3	19	152	1	107	4.81e-30	110
MS.gene053499.t1	MTR_7g020980	44.030	134	48	3	19	152	1	107	7.38e-30	109
MS.gene053499.t1	MTR_7g021010	72.308	65	18	0	88	152	4	68	2.30e-29	107
MS.gene053499.t1	MTR_2g435590	71.233	73	20	1	81	152	80	152	9.81e-29	109
MS.gene053499.t1	MTR_8g092460	73.438	64	17	0	89	152	138	201	1.00e-28	110
MS.gene053499.t1	MTR_2g105380	67.606	71	23	0	82	152	103	173	1.19e-28	111
MS.gene053499.t1	MTR_1g087920	66.667	75	25	0	82	156	63	137	1.42e-28	109
MS.gene053499.t1	MTR_8g022820	50.000	112	51	2	82	188	110	221	1.87e-28	110
MS.gene053499.t1	MTR_8g022820	50.000	112	51	2	82	188	110	221	1.87e-28	110
MS.gene053499.t1	MTR_8g022820	50.000	112	51	2	82	188	109	220	1.92e-28	110
MS.gene053499.t1	MTR_5g009620	57.009	107	36	4	94	194	110	212	5.17e-28	108
MS.gene053499.t1	MTR_3g090760	53.333	105	44	3	94	195	111	213	1.18e-26	105
MS.gene053499.t1	MTR_4g078710	52.688	93	29	1	96	188	28	105	1.46e-26	102
MS.gene053499.t1	MTR_2g078680	61.728	81	29	1	80	160	17	95	2.42e-26	101
MS.gene053499.t1	MTR_2g014340	70.312	64	19	0	96	159	19	82	4.14e-26	100
MS.gene053499.t1	MTR_2g015040	50.962	104	38	3	61	153	20	121	2.45e-25	97.4
MS.gene053499.t1	MTR_1g070070	69.444	72	20	2	83	152	7	78	3.02e-25	97.1
MS.gene053499.t1	MTR_3g053690	61.429	70	27	0	93	162	24	93	1.26e-24	97.4
MS.gene053499.t1	MTR_1g028560	66.667	75	23	1	93	167	112	184	1.57e-24	99.8
MS.gene053499.t1	MTR_2g015050	49.138	116	48	5	53	160	85	197	1.64e-24	98.6
MS.gene053499.t1	MTR_5g085100	67.188	64	21	0	95	158	45	108	3.72e-24	97.8
MS.gene053499.t1	MTR_7g081815	59.494	79	31	1	94	171	59	137	9.60e-24	94.7
MS.gene053499.t1	MTR_8g099215	62.338	77	27	1	94	168	105	181	1.61e-23	96.7
MS.gene053499.t1	MTR_7g096700	68.000	75	21	2	81	152	3	77	1.99e-23	92.0
MS.gene053499.t1	MTR_4g088005	68.852	61	18	1	93	152	54	114	2.06e-23	91.7
MS.gene053499.t1	MTR_4g054740	41.667	132	57	4	31	159	49	163	2.52e-23	94.4
MS.gene053499.t1	MTR_7g081805	59.494	79	31	1	94	171	59	137	4.52e-23	93.2
MS.gene053499.t1	MTR_3g102100	45.714	105	47	3	50	152	5	101	7.23e-23	91.7
MS.gene053499.t1	MTR_4g100420	70.968	62	17	1	93	153	154	215	8.01e-23	94.4
MS.gene053499.t1	MTR_1g090170	37.126	167	82	5	6	161	59	213	8.40e-23	94.7
MS.gene053499.t1	MTR_5g085070	64.062	64	23	0	95	158	50	113	8.64e-23	94.0
MS.gene053499.t1	MTR_8g090350	39.286	168	62	7	91	227	108	266	8.74e-23	94.0
MS.gene053499.t1	MTR_8g006840	68.254	63	19	1	96	157	125	187	1.13e-22	91.7
MS.gene053499.t1	MTR_7g081795	68.333	60	18	1	94	152	58	117	1.36e-22	91.7
MS.gene053499.t1	MTR_1g090170	38.667	150	73	4	14	152	154	295	1.41e-22	95.1
MS.gene053499.t1	MTR_4g100450	70.968	62	17	1	93	153	151	212	1.42e-22	94.0
MS.gene053499.t1	MTR_1g074310	60.526	76	26	3	81	152	3	78	2.35e-22	89.4
MS.gene053499.t1	MTR_4g100380	72.131	61	16	1	94	153	143	203	2.38e-22	92.4
MS.gene053499.t1	MTR_4g010640	69.355	62	19	0	94	155	5	66	2.46e-22	91.3
MS.gene053499.t1	MTR_8g006825	59.211	76	26	2	94	168	94	165	3.12e-22	90.9
MS.gene053499.t1	MTR_3g098580	41.216	148	53	2	5	152	19	132	3.19e-22	92.0
MS.gene053499.t1	MTR_1g048610	43.571	140	60	6	31	160	30	160	3.21e-22	91.3
MS.gene053499.t1	MTR_5g083340	63.077	65	24	0	90	154	79	143	4.44e-22	93.6
MS.gene053499.t1	MTR_4g114570	65.625	64	22	0	94	157	5	68	4.71e-22	90.5
MS.gene053499.t1	MTR_8g006815	58.667	75	28	2	94	167	94	166	5.57e-22	90.1
MS.gene053499.t1	MTR_7g096750	74.576	59	14	1	95	152	19	77	6.20e-22	88.2
MS.gene053499.t1	MTR_4g008860	61.290	62	24	0	91	152	3	64	6.84e-22	89.7
MS.gene053499.t1	MTR_2g089170	48.958	96	49	0	96	191	65	160	8.70e-22	89.0
MS.gene053499.t1	MTR_5g062700	60.274	73	29	0	80	152	157	229	8.87e-22	92.4
MS.gene053499.t1	MTR_3g095190	76.923	65	15	0	88	152	162	226	1.55e-21	91.7
MS.gene053499.t1	MTR_8g102800	43.434	99	54	1	62	158	1	99	2.04e-21	89.4
MS.gene053499.t1	MTR_5g082950	67.797	59	19	0	93	151	63	121	2.17e-21	90.9
MS.gene053499.t1	MTR_1g074230	72.881	59	15	1	95	152	18	76	2.43e-21	86.7
MS.gene053499.t1	MTR_1g069985	57.143	84	32	3	82	162	62	144	2.73e-21	88.6
MS.gene053499.t1	MTR_3g074130	66.129	62	21	0	91	152	145	206	2.91e-21	90.9
MS.gene053499.t1	MTR_5g075570	57.971	69	29	0	91	159	119	187	3.00e-21	89.7
MS.gene053499.t1	MTR_2g014300	70.175	57	17	0	96	152	15	71	3.20e-21	87.4
MS.gene053499.t1	MTR_2g103700	62.687	67	25	0	94	160	5	71	3.54e-21	87.0
MS.gene053499.t1	MTR_4g054360	68.657	67	18	2	96	159	124	190	3.71e-21	89.4
MS.gene053499.t1	MTR_2g438180	69.492	59	17	1	95	152	13	71	4.30e-21	85.9
MS.gene053499.t1	MTR_1g090290	56.338	71	30	1	84	153	101	171	4.63e-21	87.4
MS.gene053499.t1	MTR_6g088405	60.317	63	25	0	96	158	44	106	5.96e-21	87.8
MS.gene053499.t1	MTR_7g046260	49.351	77	39	0	82	158	47	123	6.81e-21	87.8
MS.gene053499.t1	MTR_7g092190	65.517	58	20	0	95	152	29	86	6.97e-21	89.0
MS.gene053499.t1	MTR_4g054860	64.286	70	22	2	93	159	128	197	1.16e-20	88.2
MS.gene053499.t1	MTR_3g106290	61.290	62	24	0	91	152	3	64	2.17e-20	85.5
MS.gene053499.t1	MTR_2g101340	47.059	85	37	1	82	158	19	103	2.55e-20	85.9
MS.gene053499.t1	MTR_1g070020	53.488	86	37	2	80	162	54	139	2.73e-20	85.9
MS.gene053499.t1	MTR_1g019110	59.016	61	25	0	92	152	40	100	3.69e-20	84.7
MS.gene053499.t1	MTR_2g090235	67.797	59	19	0	94	152	216	274	4.26e-20	88.2
MS.gene053499.t1	MTR_1g070015	60.274	73	26	2	93	162	81	153	4.46e-20	85.5
MS.gene053499.t1	MTR_8g069360	54.795	73	33	0	92	164	40	112	5.82e-20	87.8
MS.gene053499.t1	MTR_6g012970	47.826	92	46	2	90	179	32	123	6.53e-20	87.8
MS.gene053499.t1	MTR_7g011630	56.164	73	31	1	89	160	35	107	1.01e-19	87.4
MS.gene053499.t1	MTR_1g070000	54.321	81	34	2	85	162	73	153	1.31e-19	84.3
MS.gene053499.t1	MTR_4g119270	50.000	76	38	0	80	155	37	112	1.40e-19	86.3
MS.gene053499.t1	MTR_5g083330	57.534	73	28	1	84	156	26	95	1.64e-19	85.5
MS.gene053499.t1	MTR_2g019750	39.831	118	65	2	83	194	37	154	1.80e-19	85.1
MS.gene053499.t1	MTR_4g082345	59.677	62	25	0	90	151	42	103	1.86e-19	85.5
MS.gene053499.t1	MTR_5g016750	54.098	61	28	0	92	152	21	81	2.54e-19	82.4
MS.gene053499.t1	MTR_7g096810	68.750	64	19	1	90	152	7	70	3.96e-19	80.5
MS.gene053499.t1	MTR_0939s0010	62.903	62	23	0	96	157	65	126	4.22e-19	82.4
MS.gene053499.t1	MTR_3g110205	61.404	57	22	0	96	152	43	99	4.30e-19	82.0
MS.gene053499.t1	MTR_4g100650	55.556	63	28	0	90	152	68	130	4.36e-19	83.6
MS.gene053499.t1	MTR_5g012910	49.367	79	39	1	81	158	12	90	4.80e-19	81.6
MS.gene053499.t1	MTR_2g016730	52.857	70	33	0	84	153	11	80	5.40e-19	84.3
MS.gene053499.t1	MTR_8g013860	57.143	63	27	0	96	158	47	109	5.64e-19	82.0
MS.gene053499.t1	MTR_1g070035	41.860	129	55	4	41	162	31	146	5.74e-19	82.4
MS.gene053499.t1	MTR_1g069940	67.123	73	21	2	93	162	92	164	5.80e-19	82.8
MS.gene053499.t1	MTR_1g070045	55.844	77	31	2	89	162	59	135	6.22e-19	81.3
MS.gene053499.t1	MTR_1g074250	68.333	60	17	1	95	152	18	77	6.31e-19	80.1
MS.gene053499.t1	MTR_1g069960	74.576	59	14	1	95	152	26	84	8.59e-19	80.1
MS.gene053499.t1	MTR_5g032820	54.667	75	34	0	95	169	45	119	9.04e-19	84.0
MS.gene053499.t1	MTR_4g111915	56.716	67	29	0	90	156	47	113	9.35e-19	79.7
MS.gene053499.t1	MTR_8g085960	55.072	69	28	1	86	151	12	80	1.04e-18	82.0
MS.gene053499.t1	MTR_4g112490	53.333	75	35	0	82	156	39	113	1.61e-18	80.9
MS.gene053499.t1	MTR_8g023680	64.151	53	19	0	90	142	110	162	1.61e-18	83.6
MS.gene053499.t1	MTR_6g033255	66.667	72	24	0	93	164	17	88	1.73e-18	80.9
MS.gene053499.t1	MTR_6g029180	52.941	68	32	0	84	151	21	88	2.56e-18	82.4
MS.gene053499.t1	MTR_1g069945	67.123	73	21	2	93	162	98	170	2.71e-18	81.3
MS.gene053499.t1	MTR_7g085810	52.941	68	32	0	84	151	18	85	3.44e-18	81.3
MS.gene053499.t1	MTR_1g014820	57.627	59	25	0	94	152	25	83	3.54e-18	81.3
MS.gene053499.t1	MTR_8g006410	55.556	63	28	0	96	158	52	114	3.67e-18	80.1
MS.gene053499.t1	MTR_1g014860	57.627	59	25	0	94	152	20	78	3.82e-18	80.1
MS.gene053499.t1	MTR_7g084370	66.667	57	19	0	95	151	41	97	4.25e-18	81.3
MS.gene053499.t1	MTR_1g014800	53.968	63	29	0	90	152	25	87	4.94e-18	79.7
MS.gene053499.t1	MTR_1g043350	57.831	83	32	2	82	161	68	150	6.09e-18	79.7
MS.gene053499.t1	MTR_7g096830	42.763	152	55	6	86	211	91	236	6.22e-18	80.1
MS.gene053499.t1	MTR_7g117690	56.140	57	25	0	96	152	28	84	9.59e-18	78.2
MS.gene053499.t1	MTR_1g014780	56.667	60	26	0	93	152	35	94	1.09e-17	79.3
MS.gene053499.t1	MTR_7g096780	66.667	75	22	2	90	161	79	153	1.20e-17	79.3
MS.gene053499.t1	MTR_7g070220	60.317	63	18	1	96	151	78	140	1.63e-17	81.3
MS.gene053499.t1	MTR_8g032610	53.030	66	31	0	89	154	20	85	4.46e-17	78.6
MS.gene053499.t1	MTR_8g027465	56.140	57	25	0	96	152	39	95	1.32e-16	75.1
MS.gene053499.t1	MTR_3g112440	48.039	102	49	2	96	193	39	140	1.79e-16	75.9
MS.gene053499.t1	MTR_4g035430	47.761	67	35	0	86	152	22	88	1.82e-16	75.9
MS.gene053499.t1	MTR_1g074370	46.957	115	49	4	91	198	68	177	2.06e-16	75.5
MS.gene053499.t1	MTR_3g017420	62.000	50	19	0	103	152	2	51	6.11e-16	70.5
MS.gene053499.t1	MTR_1g101600	60.714	56	22	0	96	151	41	96	9.58e-16	73.6
MS.gene053499.t1	MTR_3g105510	50.820	61	30	0	91	151	32	92	1.24e-15	73.9
MS.gene053499.t1	MTR_1g097190	46.753	77	38	1	83	156	10	86	1.36e-15	71.6
MS.gene053499.t1	MTR_2g043050	56.140	57	25	0	96	152	19	75	1.41e-15	73.2
MS.gene053499.t1	MTR_1g110970	54.545	55	25	0	89	143	90	144	1.72e-15	74.7
MS.gene053499.t1	MTR_1g040430	63.462	52	18	1	103	153	118	169	1.80e-15	72.8
MS.gene053499.t1	MTR_6g465530	54.412	68	30	1	84	151	22	88	2.54e-15	72.0
MS.gene053499.t1	MTR_1g006660	54.321	81	34	1	81	158	29	109	2.93e-15	73.2
MS.gene053499.t1	MTR_1g105400	53.704	54	25	0	89	142	108	161	3.20e-15	73.9
MS.gene053499.t1	MTR_6g465510	52.941	68	31	1	84	151	22	88	4.64e-15	71.6
MS.gene053499.t1	MTR_2g043030	54.386	57	26	0	96	152	19	75	5.14e-15	71.2
MS.gene053499.t1	MTR_8g023700	55.556	54	24	0	89	142	110	163	5.57e-15	73.6
MS.gene053499.t1	MTR_1g012470	63.934	61	22	0	93	153	4	64	6.32e-15	71.2
MS.gene053499.t1	MTR_6g466130	47.945	73	37	1	80	151	49	121	7.21e-15	71.6
MS.gene053499.t1	MTR_6g465690	47.945	73	37	1	80	151	46	118	7.21e-15	72.0
MS.gene053499.t1	MTR_6g088425	60.317	63	25	0	96	158	49	111	1.10e-14	71.2
MS.gene053499.t1	MTR_6g465430	52.778	72	25	1	89	151	38	109	1.12e-14	71.2
MS.gene053499.t1	MTR_1g023170	51.948	77	37	0	84	160	28	104	1.16e-14	71.6
MS.gene053499.t1	MTR_5g008590	58.730	63	26	0	96	158	11	73	1.34e-14	70.1
MS.gene053499.t1	MTR_3g107380	67.213	61	20	0	94	154	6	66	1.58e-14	70.1
MS.gene053499.t1	MTR_6g037610	82.000	50	9	0	103	152	187	236	2.22e-14	72.0
MS.gene053499.t1	MTR_6g465460	51.389	72	26	1	89	151	38	109	2.43e-14	70.9
MS.gene053499.t1	MTR_1g098460	82.000	50	9	0	103	152	146	195	2.45e-14	71.6
MS.gene053499.t1	MTR_6g466000	57.143	56	24	0	96	151	57	112	2.62e-14	70.1
MS.gene053499.t1	MTR_5g008540	50.000	62	31	0	98	159	26	87	2.86e-14	66.6
MS.gene053499.t1	MTR_6g465450	50.000	72	27	1	89	151	38	109	2.88e-14	70.1
MS.gene053499.t1	MTR_6g465850	57.143	56	24	0	96	151	63	118	2.94e-14	70.5
MS.gene053499.t1	MTR_6g466020	53.571	56	26	0	96	151	43	98	5.80e-14	68.2
MS.gene053499.t1	MTR_7g028925	54.237	59	24	1	94	152	27	82	6.04e-14	65.9
MS.gene053499.t1	MTR_4g102670	56.140	57	24	1	96	152	15	70	6.59e-14	67.8
MS.gene053499.t1	MTR_2g043040	52.632	57	27	0	96	152	19	75	6.63e-14	68.9
MS.gene053499.t1	MTR_5g008790	34.921	126	67	4	94	204	16	141	8.03e-14	67.4
MS.gene053499.t1	MTR_6g465420	57.143	56	24	0	96	151	54	109	1.98e-13	68.2
MS.gene053499.t1	MTR_5g085125	49.275	69	35	0	95	163	15	83	2.39e-13	66.2
MS.gene053499.t1	MTR_2g043020	50.877	57	28	0	96	152	19	75	3.58e-13	66.2
MS.gene053499.t1	MTR_5g009410	62.687	67	25	0	93	159	114	180	7.46e-13	67.0
MS.gene053499.t1	MTR_1g093600	36.364	121	56	2	30	150	17	116	1.25e-12	66.6
MS.gene053499.t1	MTR_3g105480	51.852	54	26	0	98	151	33	86	1.92e-12	64.7
MS.gene053499.t1	MTR_5g057810	50.000	68	33	1	95	161	87	154	2.37e-12	65.5
MS.gene053499.t1	MTR_5g057647	50.000	68	33	1	95	161	87	154	2.37e-12	65.5
MS.gene053499.t1	MTR_5g008470	47.826	69	31	1	95	158	69	137	4.39e-12	63.2
MS.gene053499.t1	MTR_3g072610	51.471	68	31	1	92	157	21	88	5.85e-12	63.2
MS.gene053499.t1	MTR_5g058470	56.452	62	26	1	93	153	93	154	1.84e-11	62.8
MS.gene053499.t1	MTR_5g053920	45.333	75	38	2	89	162	59	131	2.61e-11	62.8
MS.gene053499.t1	MTR_5g008550	44.737	76	42	0	83	158	8	83	4.72e-11	60.5
MS.gene053499.t1	MTR_5g010940	50.000	62	25	1	96	151	54	115	5.44e-11	60.8
MS.gene053499.t1	MTR_1g101550	58.621	58	23	1	95	152	56	112	7.05e-11	60.5
MS.gene053499.t1	MTR_5g010910	50.000	62	25	1	96	151	49	110	7.18e-11	60.5
MS.gene053499.t1	MTR_2g085015	49.153	59	28	2	96	152	47	105	7.73e-11	60.5
MS.gene053499.t1	MTR_3g062440	50.685	73	34	2	96	166	115	187	8.36e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053499.t1	AT4G34410	47.283	184	57	5	5	155	19	195	6.67e-38	133
MS.gene053499.t1	AT5G67000	41.379	145	68	2	6	150	48	175	3.42e-30	110
MS.gene053499.t1	AT2G33710	80.000	60	12	0	93	152	67	126	4.26e-29	108
MS.gene053499.t1	AT2G33710	80.000	60	12	0	93	152	67	126	5.22e-29	109
MS.gene053499.t1	AT4G11140	81.356	59	11	0	94	152	85	143	7.87e-29	110
MS.gene053499.t1	AT5G13330	66.197	71	24	0	82	152	25	95	9.70e-29	108
MS.gene053499.t1	AT2G47520	68.116	69	22	0	84	152	38	106	1.01e-28	106
MS.gene053499.t1	AT5G61890	41.892	148	63	4	5	152	22	146	1.53e-28	108
MS.gene053499.t1	AT3G16770	66.667	72	24	0	81	152	64	135	3.99e-28	107
MS.gene053499.t1	AT4G27950	53.333	105	32	2	93	197	115	202	4.98e-27	106
MS.gene053499.t1	AT4G23750	72.581	62	17	0	92	153	118	179	4.41e-26	103
MS.gene053499.t1	AT4G23750	72.581	62	17	0	92	153	118	179	4.41e-26	103
MS.gene053499.t1	AT1G72360	58.667	75	31	0	78	152	7	81	4.95e-26	100
MS.gene053499.t1	AT1G72360	67.188	64	21	0	89	152	69	132	1.07e-25	101
MS.gene053499.t1	AT1G72360	67.188	64	21	0	89	152	67	130	1.07e-25	101
MS.gene053499.t1	AT5G44210	68.657	67	21	0	91	157	28	94	1.66e-25	99.4
MS.gene053499.t1	AT3G15210	57.831	83	34	1	74	156	4	85	1.75e-25	99.8
MS.gene053499.t1	AT1G03800	63.636	66	24	0	89	154	46	111	4.15e-25	99.4
MS.gene053499.t1	AT1G28370	74.138	58	15	0	95	152	57	114	1.00e-24	97.4
MS.gene053499.t1	AT5G53290	73.333	60	16	0	94	153	123	182	1.11e-24	100
MS.gene053499.t1	AT3G61630	54.348	92	23	2	83	155	80	171	1.56e-24	99.4
MS.gene053499.t1	AT1G28370	74.138	58	15	0	95	152	19	76	1.63e-24	95.9
MS.gene053499.t1	AT5G65130	40.972	144	63	4	94	219	111	250	6.86e-24	97.1
MS.gene053499.t1	AT5G65130	40.972	144	63	4	94	219	109	248	7.90e-24	96.7
MS.gene053499.t1	AT5G50080	48.299	147	52	4	16	152	1	133	1.01e-23	95.1
MS.gene053499.t1	AT5G51190	65.152	66	22	1	89	153	65	130	1.14e-23	95.1
MS.gene053499.t1	AT5G50080	72.973	74	14	1	79	152	75	142	1.34e-23	95.1
MS.gene053499.t1	AT5G47230	74.194	62	15	1	93	153	153	214	1.88e-23	96.3
MS.gene053499.t1	AT1G50640	69.492	59	18	0	95	153	27	85	4.87e-23	93.6
MS.gene053499.t1	AT4G39780	42.742	124	65	3	30	152	31	149	5.31e-23	94.4
MS.gene053499.t1	AT1G43160	45.833	144	41	3	19	152	1	117	6.67e-23	92.4
MS.gene053499.t1	AT3G20310	46.809	94	44	1	95	188	26	113	1.01e-22	93.2
MS.gene053499.t1	AT2G44840	58.108	74	30	1	87	159	83	156	1.11e-22	92.4
MS.gene053499.t1	AT5G47220	72.131	61	16	1	94	153	115	175	1.45e-22	92.4
MS.gene053499.t1	AT5G07310	78.333	60	13	0	93	152	89	148	1.64e-22	92.8
MS.gene053499.t1	AT2G22200	66.129	62	21	0	91	152	66	127	1.72e-22	92.8
MS.gene053499.t1	AT5G43410	74.576	59	14	1	95	152	14	72	1.89e-22	89.4
MS.gene053499.t1	AT1G22985	67.606	71	18	2	93	158	72	142	1.89e-22	90.1
MS.gene053499.t1	AT4G17500	72.131	61	16	1	94	153	146	206	2.09e-22	92.8
MS.gene053499.t1	AT1G36060	65.625	64	22	0	91	154	138	201	2.24e-22	93.6
MS.gene053499.t1	AT4G13620	65.672	67	23	0	94	160	230	296	2.73e-22	94.4
MS.gene053499.t1	AT4G17490	70.968	62	17	1	93	153	134	195	3.18e-22	92.4
MS.gene053499.t1	AT1G22190	67.742	62	20	0	91	152	78	139	3.55e-22	92.0
MS.gene053499.t1	AT2G20880	61.842	76	26	1	92	167	183	255	3.84e-22	93.2
MS.gene053499.t1	AT4G28140	53.933	89	32	1	92	171	139	227	4.30e-22	92.4
MS.gene053499.t1	AT3G23240	59.211	76	28	2	90	162	76	151	4.88e-22	90.5
MS.gene053499.t1	AT2G31230	64.384	73	23	2	93	162	83	155	4.91e-22	91.3
MS.gene053499.t1	AT2G46310	47.273	110	52	2	95	198	98	207	6.15e-22	92.0
MS.gene053499.t1	AT3G23230	71.186	59	16	1	95	152	19	77	1.26e-21	87.4
MS.gene053499.t1	AT1G78080	67.742	62	20	0	91	152	147	208	1.28e-21	91.7
MS.gene053499.t1	AT5G25390	60.000	70	28	0	94	163	5	74	1.41e-21	88.6
MS.gene053499.t1	AT1G15360	66.667	60	20	0	94	153	5	64	1.49e-21	89.0
MS.gene053499.t1	AT1G15360	66.667	60	20	0	94	153	5	64	1.49e-21	89.0
MS.gene053499.t1	AT5G25190	61.290	62	24	0	91	152	3	64	2.74e-21	87.8
MS.gene053499.t1	AT4G32800	53.846	78	32	1	81	158	8	81	2.82e-21	88.6
MS.gene053499.t1	AT5G61600	63.934	61	21	1	94	153	86	146	3.01e-21	89.0
MS.gene053499.t1	AT1G71130	56.471	85	29	2	88	167	71	152	3.31e-21	87.0
MS.gene053499.t1	AT5G05410	66.129	62	21	0	96	157	79	140	3.45e-21	90.1
MS.gene053499.t1	AT1G75490	44.643	112	49	3	53	160	1	103	3.45e-21	88.2
MS.gene053499.t1	AT5G05410	66.129	62	21	0	96	157	79	140	4.50e-21	90.1
MS.gene053499.t1	AT1G28360	68.966	58	18	0	95	152	11	68	4.91e-21	87.4
MS.gene053499.t1	AT2G23340	57.812	64	27	0	89	152	21	84	5.67e-21	86.7
MS.gene053499.t1	AT4G06746	59.322	59	24	0	94	152	34	92	7.40e-21	85.9
MS.gene053499.t1	AT1G46768	54.795	73	31	1	80	152	17	87	1.14e-20	85.5
MS.gene053499.t1	AT1G46768	54.795	73	31	1	80	152	17	87	1.14e-20	85.5
MS.gene053499.t1	AT1G46768	54.795	73	31	1	80	152	17	87	1.20e-20	84.7
MS.gene053499.t1	AT4G36900	55.556	63	28	0	90	152	24	86	1.27e-20	86.3
MS.gene053499.t1	AT5G25810	55.556	72	32	0	81	152	21	92	1.35e-20	86.7
MS.gene053499.t1	AT5G64750	78.000	50	11	0	103	152	192	241	1.50e-20	89.4
MS.gene053499.t1	AT5G19790	58.571	70	29	0	82	151	8	77	2.30e-20	87.0
MS.gene053499.t1	AT2G20350	41.844	141	63	3	7	147	17	138	2.54e-20	84.7
MS.gene053499.t1	AT1G71450	53.333	75	35	0	84	158	12	86	2.55e-20	85.1
MS.gene053499.t1	AT5G11590	53.846	78	35	1	82	158	36	113	2.86e-20	86.3
MS.gene053499.t1	AT4G16750	56.338	71	29	1	84	152	26	96	4.02e-20	84.7
MS.gene053499.t1	AT5G07580	53.425	73	33	1	82	153	96	168	4.19e-20	85.1
MS.gene053499.t1	AT3G57600	61.667	60	23	0	95	154	27	86	4.95e-20	86.7
MS.gene053499.t1	AT5G67190	43.333	90	38	1	90	179	15	91	6.16e-20	84.3
MS.gene053499.t1	AT5G25390	58.571	70	26	1	94	163	5	71	6.24e-20	84.3
MS.gene053499.t1	AT5G13910	54.795	73	33	0	83	155	7	79	6.28e-20	84.7
MS.gene053499.t1	AT3G16280	63.158	57	21	0	96	152	61	117	9.80e-20	84.7
MS.gene053499.t1	AT3G16280	63.158	57	21	0	96	152	79	135	9.92e-20	85.1
MS.gene053499.t1	AT1G21910	54.839	62	28	0	96	157	50	111	1.13e-19	84.7
MS.gene053499.t1	AT2G25820	63.158	57	21	0	96	152	26	82	1.19e-19	84.3
MS.gene053499.t1	AT2G35700	61.404	57	22	0	96	152	45	101	1.77e-19	83.2
MS.gene053499.t1	AT4G18450	67.742	62	18	2	94	153	108	169	1.86e-19	85.5
MS.gene053499.t1	AT2G44940	54.286	70	32	0	83	152	87	156	1.90e-19	85.1
MS.gene053499.t1	AT3G50260	55.385	65	28	1	88	152	14	77	2.50e-19	81.6
MS.gene053499.t1	AT1G12980	66.667	57	19	0	95	151	56	112	4.10e-19	84.7
MS.gene053499.t1	AT3G11020	64.912	57	20	0	96	152	78	134	4.77e-19	84.7
MS.gene053499.t1	AT3G60490	61.404	57	22	0	96	152	71	127	1.10e-18	82.4
MS.gene053499.t1	AT5G18560	51.429	70	34	0	82	151	41	110	1.35e-18	83.6
MS.gene053499.t1	AT1G01250	36.667	120	66	3	96	211	45	158	1.50e-18	80.9
MS.gene053499.t1	AT5G18450	57.353	68	29	0	84	151	22	89	2.03e-18	82.4
MS.gene053499.t1	AT3G14230	66.197	71	24	0	82	152	109	179	4.27e-18	82.4
MS.gene053499.t1	AT3G14230	66.197	71	24	0	82	152	110	180	4.34e-18	82.4
MS.gene053499.t1	AT3G14230	66.197	71	24	0	82	152	114	184	4.45e-18	82.4
MS.gene053499.t1	AT1G12890	55.714	70	31	0	82	151	7	76	5.13e-18	80.1
MS.gene053499.t1	AT2G40340	59.322	59	24	0	96	154	14	72	5.20e-18	81.3
MS.gene053499.t1	AT2G40340	59.322	59	24	0	96	154	14	72	5.20e-18	81.3
MS.gene053499.t1	AT2G40340	59.322	59	24	0	96	154	14	72	5.20e-18	81.3
MS.gene053499.t1	AT1G24590	66.667	57	19	0	95	151	57	113	5.43e-18	81.3
MS.gene053499.t1	AT1G53910	64.000	75	25	1	85	159	114	186	5.95e-18	81.6
MS.gene053499.t1	AT1G53910	64.000	75	25	1	85	159	114	186	5.95e-18	81.6
MS.gene053499.t1	AT1G53910	64.000	75	25	1	85	159	112	184	6.22e-18	81.6
MS.gene053499.t1	AT5G21960	59.016	61	25	0	92	152	3	63	7.64e-18	79.3
MS.gene053499.t1	AT5G67010	35.772	123	56	3	10	129	21	123	8.57e-18	77.8
MS.gene053499.t1	AT1G06160	65.278	72	22	2	94	162	80	151	9.64e-18	79.7
MS.gene053499.t1	AT2G40340	59.322	59	24	0	96	154	79	137	1.97e-17	80.1
MS.gene053499.t1	AT2G40340	59.322	59	24	0	96	154	72	130	2.16e-17	80.1
MS.gene053499.t1	AT1G28160	62.295	61	23	0	95	155	38	98	2.26e-17	78.6
MS.gene053499.t1	AT2G40340	59.322	59	24	0	96	154	72	130	2.47e-17	79.3
MS.gene053499.t1	AT2G40350	43.529	85	41	1	96	173	67	151	2.57e-17	76.6
MS.gene053499.t1	AT2G40350	55.932	59	26	0	96	154	74	132	2.57e-17	76.6
MS.gene053499.t1	AT4G25470	48.235	85	36	1	75	151	22	106	2.63e-17	77.8
MS.gene053499.t1	AT1G74930	42.045	88	48	1	82	166	7	94	2.76e-17	77.4
MS.gene053499.t1	AT4G25490	62.500	56	21	0	96	151	48	103	7.65e-17	76.6
MS.gene053499.t1	AT2G36450	50.667	75	33	2	96	169	15	86	1.10e-16	75.5
MS.gene053499.t1	AT1G19210	55.000	60	27	0	93	152	9	68	1.31e-16	75.5
MS.gene053499.t1	AT4G25480	45.882	85	38	1	75	151	22	106	1.42e-16	75.9
MS.gene053499.t1	AT3G23220	67.164	67	21	1	95	160	13	79	1.45e-16	73.9
MS.gene053499.t1	AT1G68550	68.000	50	16	0	93	142	110	159	1.53e-16	77.4
MS.gene053499.t1	AT1G68550	68.000	50	16	0	93	142	110	159	1.53e-16	77.4
MS.gene053499.t1	AT4G31060	48.000	75	38	1	78	152	10	83	1.88e-16	75.1
MS.gene053499.t1	AT5G51990	42.478	113	46	3	89	192	38	140	5.21e-16	74.7
MS.gene053499.t1	AT1G53170	62.857	70	24	1	87	154	20	89	6.31e-16	73.6
MS.gene053499.t1	AT2G40220	60.000	70	28	0	82	151	41	110	1.07e-15	75.1
MS.gene053499.t1	AT1G04370	72.881	59	15	1	95	152	19	77	2.51e-15	70.5
MS.gene053499.t1	AT1G77200	58.462	65	27	0	88	152	35	99	3.33e-15	72.8
MS.gene053499.t1	AT1G77640	48.193	83	40	1	90	169	37	119	3.68e-15	72.8
MS.gene053499.t1	AT5G11190	56.579	76	28	1	94	164	5	80	3.80e-15	71.6
MS.gene053499.t1	AT1G64380	54.878	82	30	1	91	172	131	205	6.55e-14	70.1
MS.gene053499.t1	AT1G22810	43.038	79	42	2	92	167	10	88	7.68e-14	67.0
MS.gene053499.t1	AT5G61590	56.338	71	30	1	84	153	95	165	1.29e-13	67.8
MS.gene053499.t1	AT2G38340	59.091	66	19	1	95	152	69	134	1.59e-13	68.2
MS.gene053499.t1	AT1G63030	47.368	76	35	1	81	151	10	85	3.69e-13	65.9
MS.gene053499.t1	AT1G63030	47.368	76	35	1	81	151	10	85	3.69e-13	65.9
MS.gene053499.t1	AT3G25890	64.444	45	16	0	98	142	133	177	9.26e-13	67.0
MS.gene053499.t1	AT3G25890	64.444	45	16	0	98	142	133	177	9.26e-13	67.0
MS.gene053499.t1	AT1G12610	41.772	79	41	1	78	151	7	85	1.23e-12	65.1
MS.gene053499.t1	AT1G71520	41.250	80	42	2	93	167	11	90	1.48e-12	63.5
MS.gene053499.t1	AT1G49120	61.702	47	18	0	96	142	87	133	2.15e-12	65.9
MS.gene053499.t1	AT1G68840	46.753	77	39	1	80	156	49	123	3.93e-12	65.1
MS.gene053499.t1	AT1G68840	46.753	77	39	1	80	156	49	123	3.93e-12	65.1
MS.gene053499.t1	AT1G33760	52.239	67	32	0	96	162	20	86	4.34e-12	63.2
MS.gene053499.t1	AT1G44830	54.545	66	29	1	94	158	33	98	1.14e-11	62.4
MS.gene053499.t1	AT2G39250	42.105	95	47	3	82	170	95	187	3.72e-11	61.2

Find 74 sgRNAs with CRISPR-Local

Find 79 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCAACAACTAATGAGGTTTA+TGG	0.166648	4.3:-26701855	MS.gene053499:CDS
ATTGAGACAAATATGGGATT+TGG	0.243614	4.3:-26701926	MS.gene053499:CDS
GGCAGAGGCCATGGGGAAAA+TGG	0.260541	4.3:-26702177	MS.gene053499:CDS
AATGCAAATTGAGACAAATA+TGG	0.265350	4.3:-26701933	MS.gene053499:CDS
ATAATAAGGATTGTGATTAT+TGG	0.269800	4.3:-26701901	MS.gene053499:CDS
TATGGGATTTGGGAATAATA+AGG	0.286148	4.3:-26701915	MS.gene053499:CDS
ACTAAAAGTGTTCCATGTTC+TGG	0.297402	4.3:+26701808	None:intergenic
TAATAAGGATTGTGATTATT+GGG	0.318423	4.3:-26701900	MS.gene053499:CDS
TCCAAAGGGACAACCACTTC+TGG	0.329688	4.3:+26701986	None:intergenic
ATCCTGCTATGTTGCATTCT+CGG	0.340084	4.3:+26702281	None:intergenic
CGAGACGTGCGGTCCGTGTT+TGG	0.360884	4.3:-26702135	MS.gene053499:CDS
TTGAGACAAATATGGGATTT+GGG	0.361286	4.3:-26701925	MS.gene053499:CDS
GCCAGAAGTGGTTGTCCCTT+TGG	0.361757	4.3:-26701987	MS.gene053499:CDS
TGTCCCTTTGGAGGATATAA+AGG	0.371554	4.3:-26701975	MS.gene053499:CDS
GCAGAGGCCATGGGGAAAAT+GGG	0.401441	4.3:-26702176	MS.gene053499:CDS
CAAGATACCATGTTCACTTC+CGG	0.414333	4.3:+26702304	None:intergenic
AGCTTCTTCCGCCGTGGTAA+AGG	0.419719	4.3:+26702105	None:intergenic
GAGGAGTGAGGCAGAGGCCA+TGG	0.424131	4.3:-26702186	MS.gene053499:CDS
CGTGCGGTCCGTGTTTGGCT+CGG	0.435176	4.3:-26702130	MS.gene053499:CDS
TGATCCGTGAGGCAAAATTC+AGG	0.438212	4.3:+26702364	None:intergenic
GGTGAGGGTGGTGGTGGAGA+AGG	0.454388	4.3:+26702465	None:intergenic
GTGCGGTCCGTGTTTGGCTC+GGG	0.455397	4.3:-26702129	MS.gene053499:CDS
ATCGGAGGTGAGGGTGGTGG+TGG	0.456825	4.3:+26702459	None:intergenic
AGGAGTGAGGCAGAGGCCAT+GGG	0.478974	4.3:-26702185	MS.gene053499:CDS
ATGCAAATTGAGACAAATAT+GGG	0.479691	4.3:-26701932	MS.gene053499:CDS
TATGGAAAACGCGGTGGAGG+TGG	0.486810	4.3:+26702387	None:intergenic
AAACGCGGTGGAGGTGGAGC+CGG	0.490820	4.3:+26702393	None:intergenic
TGCAACATAGCAGGATGCTT+AGG	0.493726	4.3:-26702274	MS.gene053499:CDS
AGTACAGAGGAGTGAGGCAG+AGG	0.495675	4.3:-26702192	MS.gene053499:CDS
AAACACGGACCGCACGTCTC+GGG	0.502410	4.3:+26702137	None:intergenic
AGCAGCATTGTCGTAAGCTC+TGG	0.505689	4.3:+26702081	None:intergenic
TGCCGAGAATGCAACATAGC+AGG	0.511948	4.3:-26702283	MS.gene053499:CDS
TTGATCGGAGGTGAGGGTGG+TGG	0.516391	4.3:+26702456	None:intergenic
AGAAGTGGTTGTCCCTTTGG+AGG	0.528380	4.3:-26701984	MS.gene053499:CDS
CAAACACGGACCGCACGTCT+CGG	0.535999	4.3:+26702136	None:intergenic
TGTGATTATTGGGATAGTAT+CGG	0.542915	4.3:-26701890	MS.gene053499:CDS
CGTCCTTTATATCCTCCAAA+GGG	0.548435	4.3:+26701972	None:intergenic
AGGTATGGAAAACGCGGTGG+AGG	0.548473	4.3:+26702384	None:intergenic
CGTGAGGCAAAATTCAGGTA+TGG	0.556005	4.3:+26702369	None:intergenic
GAATTCTTGATCGGAGGTGA+GGG	0.564059	4.3:+26702450	None:intergenic
CAGTTTAGAACGAATAGTGC+CGG	0.564131	4.3:-26702323	MS.gene053499:CDS
TCGTCCTTTATATCCTCCAA+AGG	0.564254	4.3:+26701971	None:intergenic
TAAACTGCTGCTTCCGACAG+TGG	0.564361	4.3:+26702339	None:intergenic
CTCACGGATCACTCCACTGT+CGG	0.568227	4.3:-26702352	MS.gene053499:CDS
TGAGCTTGGCTCTCGGCCCA+CGG	0.568341	4.3:+26702050	None:intergenic
AATGCTGCTATCGAGTTCCG+TGG	0.573830	4.3:-26702067	MS.gene053499:CDS
AACGACGGGAAAATTGAGCT+TGG	0.576286	4.3:+26702036	None:intergenic
TTCTTGATCGGAGGTGAGGG+TGG	0.576817	4.3:+26702453	None:intergenic
AGAATTCTTGATCGGAGGTG+AGG	0.578370	4.3:+26702449	None:intergenic
ATTCTTCTGACTCCAGAACA+TGG	0.580276	4.3:-26701820	MS.gene053499:CDS
GGAAAATTGAGCTTGGCTCT+CGG	0.582771	4.3:+26702043	None:intergenic
AATAGTGCCGGAAGTGAACA+TGG	0.591939	4.3:-26702311	MS.gene053499:CDS
TTAAGCGATTCATCAACGAC+GGG	0.595662	4.3:+26702022	None:intergenic
GCTCTAACCAACGTAGTCTC+CGG	0.597841	4.3:-26702412	MS.gene053499:CDS
GATGGCAGAGAATTCTTGAT+CGG	0.603483	4.3:+26702441	None:intergenic
TGATGAATCGCTTAAGAACG+TGG	0.611709	4.3:-26702014	MS.gene053499:CDS
GGCAGAGAATTCTTGATCGG+AGG	0.620344	4.3:+26702444	None:intergenic
TTGGCTCGGGACCTTTACCA+CGG	0.622839	4.3:-26702116	MS.gene053499:CDS
CTTAAGCGATTCATCAACGA+CGG	0.628790	4.3:+26702021	None:intergenic
GAACGTGGAGGAGCCAGAAG+TGG	0.633912	4.3:-26701999	MS.gene053499:CDS
ATGCTGCTATCGAGTTCCGT+GGG	0.636885	4.3:-26702066	MS.gene053499:CDS
TAAAGGTCCCGAGCCAAACA+CGG	0.637276	4.3:+26702122	None:intergenic
GTTGGTTAGAGCAGCGACGA+TGG	0.650660	4.3:+26702423	None:intergenic
GGAGTGAGGCAGAGGCCATG+GGG	0.658766	4.3:-26702184	MS.gene053499:CDS
TCTGGCAGCTTCTTCCGCCG+TGG	0.663632	4.3:+26702099	None:intergenic
GATTCGTGACCCGAGACGTG+CGG	0.666469	4.3:-26702146	MS.gene053499:CDS
TTCAGGTATGGAAAACGCGG+TGG	0.673360	4.3:+26702381	None:intergenic
AGAGCTAAGAAGAAGTACAG+AGG	0.676163	4.3:-26702205	MS.gene053499:CDS
AGAAGAAGTACAGAGGAGTG+AGG	0.683711	4.3:-26702198	MS.gene053499:CDS
GGTGGAGCCGGAGACTACGT+TGG	0.715698	4.3:+26702405	None:intergenic
CGACAGTGGAGTGATCCGTG+AGG	0.727066	4.3:+26702353	None:intergenic
AAATTCAGGTATGGAAAACG+CGG	0.727381	4.3:+26702378	None:intergenic
GCTCGGGACCTTTACCACGG+CGG	0.766957	4.3:-26702113	MS.gene053499:CDS
TGAATCGCTTAAGAACGTGG+AGG	0.768895	4.3:-26702011	MS.gene053499:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAATAAGGATTGTGATTAT+TGG	-	chr4.3:26702376-26702395	MS.gene053499:CDS	20.0%
!!	TAATAAGGATTGTGATTATT+GGG	-	chr4.3:26702377-26702396	MS.gene053499:CDS	20.0%
!	AATGCAAATTGAGACAAATA+TGG	-	chr4.3:26702344-26702363	MS.gene053499:CDS	25.0%
!	ATGCAAATTGAGACAAATAT+GGG	-	chr4.3:26702345-26702364	MS.gene053499:CDS	25.0%
!!!	GTTTTTGTTTTTTCTCTTCA+GGG	+	chr4.3:26702041-26702060	None:intergenic	25.0%
!!!	TGTTTTTGTTTTTTCTCTTC+AGG	+	chr4.3:26702042-26702061	None:intergenic	25.0%
	ATTGAGACAAATATGGGATT+TGG	-	chr4.3:26702351-26702370	MS.gene053499:CDS	30.0%
	TATGGGATTTGGGAATAATA+AGG	-	chr4.3:26702362-26702381	MS.gene053499:CDS	30.0%
	TCAACAACTAATGAGGTTTA+TGG	-	chr4.3:26702422-26702441	MS.gene053499:CDS	30.0%
	TGTGATTATTGGGATAGTAT+CGG	-	chr4.3:26702387-26702406	MS.gene053499:CDS	30.0%
	TTGAGACAAATATGGGATTT+GGG	-	chr4.3:26702352-26702371	MS.gene053499:CDS	30.0%
!	CTGATTTTCAACAACTAATG+AGG	-	chr4.3:26702415-26702434	MS.gene053499:CDS	30.0%
	AAATTCAGGTATGGAAAACG+CGG	+	chr4.3:26701902-26701921	None:intergenic	35.0%
!!	ACTAAAAGTGTTCCATGTTC+TGG	+	chr4.3:26702472-26702491	None:intergenic	35.0%
	ATCCTGCTATGTTGCATTCT+CGG	+	chr4.3:26701999-26702018	None:intergenic	40.0%
	ATTCTTCTGACTCCAGAACA+TGG	-	chr4.3:26702457-26702476	MS.gene053499:CDS	40.0%
	CAAGATACCATGTTCACTTC+CGG	+	chr4.3:26701976-26701995	None:intergenic	40.0%
	CGTCCTTTATATCCTCCAAA+GGG	+	chr4.3:26702308-26702327	None:intergenic	40.0%
	CTTAAGCGATTCATCAACGA+CGG	+	chr4.3:26702259-26702278	None:intergenic	40.0%
	GATGGCAGAGAATTCTTGAT+CGG	+	chr4.3:26701839-26701858	None:intergenic	40.0%
	TCGTCCTTTATATCCTCCAA+AGG	+	chr4.3:26702309-26702328	None:intergenic	40.0%
	TGATGAATCGCTTAAGAACG+TGG	-	chr4.3:26702263-26702282	MS.gene053499:CDS	40.0%
	TTAAGCGATTCATCAACGAC+GGG	+	chr4.3:26702258-26702277	None:intergenic	40.0%
!	AGAGCTAAGAAGAAGTACAG+AGG	-	chr4.3:26702072-26702091	MS.gene053499:CDS	40.0%
!	CAGTTTAGAACGAATAGTGC+CGG	-	chr4.3:26701954-26701973	MS.gene053499:CDS	40.0%
!	CATACCTGAATTTTGCCTCA+CGG	-	chr4.3:26701909-26701928	MS.gene053499:CDS	40.0%
!	TGTCCCTTTGGAGGATATAA+AGG	-	chr4.3:26702302-26702321	MS.gene053499:CDS	40.0%
	AACGACGGGAAAATTGAGCT+TGG	+	chr4.3:26702244-26702263	None:intergenic	45.0%
	AGAATTCTTGATCGGAGGTG+AGG	+	chr4.3:26701831-26701850	None:intergenic	45.0%
	CGTGAGGCAAAATTCAGGTA+TGG	+	chr4.3:26701911-26701930	None:intergenic	45.0%
	GAATTCTTGATCGGAGGTGA+GGG	+	chr4.3:26701830-26701849	None:intergenic	45.0%
	TGAATCGCTTAAGAACGTGG+AGG	-	chr4.3:26702266-26702285	MS.gene053499:CDS	45.0%
	TGATCCGTGAGGCAAAATTC+AGG	+	chr4.3:26701916-26701935	None:intergenic	45.0%
	TGCAACATAGCAGGATGCTT+AGG	-	chr4.3:26702003-26702022	MS.gene053499:CDS	45.0%
!	AATAGTGCCGGAAGTGAACA+TGG	-	chr4.3:26701966-26701985	MS.gene053499:CDS	45.0%
!	AGAAGAAGTACAGAGGAGTG+AGG	-	chr4.3:26702079-26702098	MS.gene053499:CDS	45.0%
!	GGAAAATTGAGCTTGGCTCT+CGG	+	chr4.3:26702237-26702256	None:intergenic	45.0%
	AATGCTGCTATCGAGTTCCG+TGG	-	chr4.3:26702210-26702229	MS.gene053499:CDS	50.0%
	AGAAGTGGTTGTCCCTTTGG+AGG	-	chr4.3:26702293-26702312	MS.gene053499:CDS	50.0%
	AGCAGCATTGTCGTAAGCTC+TGG	+	chr4.3:26702199-26702218	None:intergenic	50.0%
	ATGCTGCTATCGAGTTCCGT+GGG	-	chr4.3:26702211-26702230	MS.gene053499:CDS	50.0%
	GCTCTAACCAACGTAGTCTC+CGG	-	chr4.3:26701865-26701884	MS.gene053499:CDS	50.0%
	GGCAGAGAATTCTTGATCGG+AGG	+	chr4.3:26701836-26701855	None:intergenic	50.0%
	TAAAGGTCCCGAGCCAAACA+CGG	+	chr4.3:26702158-26702177	None:intergenic	50.0%
	TCCAAAGGGACAACCACTTC+TGG	+	chr4.3:26702294-26702313	None:intergenic	50.0%
	TGCCGAGAATGCAACATAGC+AGG	-	chr4.3:26701994-26702013	MS.gene053499:CDS	50.0%
	TTCAGGTATGGAAAACGCGG+TGG	+	chr4.3:26701899-26701918	None:intergenic	50.0%
!	TAAACTGCTGCTTCCGACAG+TGG	+	chr4.3:26701941-26701960	None:intergenic	50.0%
	AGCTTCTTCCGCCGTGGTAA+AGG	+	chr4.3:26702175-26702194	None:intergenic	55.0%
	AGGTATGGAAAACGCGGTGG+AGG	+	chr4.3:26701896-26701915	None:intergenic	55.0%
	AGTACAGAGGAGTGAGGCAG+AGG	-	chr4.3:26702085-26702104	MS.gene053499:CDS	55.0%
	CTCACGGATCACTCCACTGT+CGG	-	chr4.3:26701925-26701944	MS.gene053499:CDS	55.0%
	GCAGAGGCCATGGGGAAAAT+GGG	-	chr4.3:26702101-26702120	MS.gene053499:CDS	55.0%
	GCCAGAAGTGGTTGTCCCTT+TGG	-	chr4.3:26702290-26702309	MS.gene053499:CDS	55.0%
	GTTGGTTAGAGCAGCGACGA+TGG	+	chr4.3:26701857-26701876	None:intergenic	55.0%
	TATGGAAAACGCGGTGGAGG+TGG	+	chr4.3:26701893-26701912	None:intergenic	55.0%
	TTCTTGATCGGAGGTGAGGG+TGG	+	chr4.3:26701827-26701846	None:intergenic	55.0%
!	TCAGCAGCCCATTTTCCCCA+TGG	+	chr4.3:26702111-26702130	None:intergenic	55.0%
!!	TTGGCTCGGGACCTTTACCA+CGG	-	chr4.3:26702161-26702180	MS.gene053499:CDS	55.0%
	AAACACGGACCGCACGTCTC+GGG	+	chr4.3:26702143-26702162	None:intergenic	60.0%
	AGGAGTGAGGCAGAGGCCAT+GGG	-	chr4.3:26702092-26702111	MS.gene053499:CDS	60.0%
	CAAACACGGACCGCACGTCT+CGG	+	chr4.3:26702144-26702163	None:intergenic	60.0%
	CGACAGTGGAGTGATCCGTG+AGG	+	chr4.3:26701927-26701946	None:intergenic	60.0%
	GAACGTGGAGGAGCCAGAAG+TGG	-	chr4.3:26702278-26702297	MS.gene053499:CDS	60.0%
	GATTCGTGACCCGAGACGTG+CGG	-	chr4.3:26702131-26702150	MS.gene053499:CDS	60.0%
	GGCAGAGGCCATGGGGAAAA+TGG	-	chr4.3:26702100-26702119	MS.gene053499:CDS	60.0%
	TTGATCGGAGGTGAGGGTGG+TGG	+	chr4.3:26701824-26701843	None:intergenic	60.0%
	AAACGCGGTGGAGGTGGAGC+CGG	+	chr4.3:26701887-26701906	None:intergenic	65.0%
	CGAGACGTGCGGTCCGTGTT+TGG	-	chr4.3:26702142-26702161	MS.gene053499:CDS	65.0%
	CGTGCGGTCCGTGTTTGGCT+CGG	-	chr4.3:26702147-26702166	MS.gene053499:CDS	65.0%
	GAGGAGTGAGGCAGAGGCCA+TGG	-	chr4.3:26702091-26702110	MS.gene053499:CDS	65.0%
	GCTCGGGACCTTTACCACGG+CGG	-	chr4.3:26702164-26702183	MS.gene053499:CDS	65.0%
	GGAGTGAGGCAGAGGCCATG+GGG	-	chr4.3:26702093-26702112	MS.gene053499:CDS	65.0%
	GGTGGAGCCGGAGACTACGT+TGG	+	chr4.3:26701875-26701894	None:intergenic	65.0%
	TCTGGCAGCTTCTTCCGCCG+TGG	+	chr4.3:26702181-26702200	None:intergenic	65.0%
!	ATCGGAGGTGAGGGTGGTGG+TGG	+	chr4.3:26701821-26701840	None:intergenic	65.0%
!	GTGCGGTCCGTGTTTGGCTC+GGG	-	chr4.3:26702148-26702167	MS.gene053499:CDS	65.0%
!	TGAGCTTGGCTCTCGGCCCA+CGG	+	chr4.3:26702230-26702249	None:intergenic	65.0%
!!	GGTGAGGGTGGTGGTGGAGA+AGG	+	chr4.3:26701815-26701834	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	26701802	26702497	26701802	ID=MS.gene053499
chr4.3	mRNA	26701802	26702497	26701802	ID=MS.gene053499.t1;Parent=MS.gene053499
chr4.3	exon	26701802	26702497	26701802	ID=MS.gene053499.t1.exon1;Parent=MS.gene053499.t1
chr4.3	CDS	26701802	26702497	26701802	ID=cds.MS.gene053499.t1;Parent=MS.gene053499.t1

Gene Sequence

>MS.gene053499

ATGAACTACGCCTTCTCCACCACCACCCTCACCTCCGATCAAGAATTCTCTGCCATCGTCGCTGCTCTAACCAACGTAGTCTCCGGCTCCACCTCCACCGCGTTTTCCATACCTGAATTTTGCCTCACGGATCACTCCACTGTCGGAAGCAGCAGTTTAGAACGAATAGTGCCGGAAGTGAACATGGTATCTTGCCGAGAATGCAACATAGCAGGATGCTTAGGATGCAATTTCTTCCCTGAAGAGAAAAAACAAAAACATAAACAAAAAAGAGCTAAGAAGAAGTACAGAGGAGTGAGGCAGAGGCCATGGGGAAAATGGGCTGCTGAGATTCGTGACCCGAGACGTGCGGTCCGTGTTTGGCTCGGGACCTTTACCACGGCGGAAGAAGCTGCCAGAGCTTACGACAATGCTGCTATCGAGTTCCGTGGGCCGAGAGCCAAGCTCAATTTTCCCGTCGTTGATGAATCGCTTAAGAACGTGGAGGAGCCAGAAGTGGTTGTCCCTTTGGAGGATATAAAGGACGAGAATATGAATCAAGAAATGCAAATTGAGACAAATATGGGATTTGGGAATAATAAGGATTGTGATTATTGGGATAGTATCGGAGAAGCTGATTTTCAACAACTAATGAGGTTTATGGATTTTGATAGAGATTCTTCTGACTCCAGAACATGGAACACTTTTAGTTCTTGA

Protein sequence

>MS.gene053499.t1

MNYAFSTTTLTSDQEFSAIVAALTNVVSGSTSTAFSIPEFCLTDHSTVGSSSLERIVPEVNMVSCRECNIAGCLGCNFFPEEKKQKHKQKRAKKKYRGVRQRPWGKWAAEIRDPRRAVRVWLGTFTTAEEAARAYDNAAIEFRGPRAKLNFPVVDESLKNVEEPEVVVPLEDIKDENMNQEMQIETNMGFGNNKDCDYWDSIGEADFQQLMRFMDFDRDSSDSRTWNTFSS