AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene39643

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene39643.t1 MTR_4g086190 87.554 233 19 4 1 225 1 231 8.43e-134 375
MS.gene39643.t1 MTR_4g086160 76.887 212 45 3 9 219 12 220 9.39e-109 312
MS.gene39643.t1 MTR_4g086165 72.414 232 32 7 1 224 1 208 4.32e-104 299
MS.gene39643.t1 MTR_4g086220 71.179 229 48 6 1 219 3 223 3.32e-98 285
MS.gene39643.t1 MTR_7g021010 44.030 134 48 3 19 152 1 107 4.06e-30 110
MS.gene39643.t1 MTR_7g020980 44.030 134 48 3 19 152 1 107 7.81e-30 109
MS.gene39643.t1 MTR_7g021010 72.308 65 18 0 88 152 4 68 2.69e-29 107
MS.gene39643.t1 MTR_8g092460 78.333 60 13 0 93 152 142 201 1.20e-28 110
MS.gene39643.t1 MTR_2g105380 67.606 71 23 0 82 152 103 173 1.45e-28 110
MS.gene39643.t1 MTR_1g087920 66.667 75 25 0 82 156 63 137 2.00e-28 109
MS.gene39643.t1 MTR_8g022820 50.000 112 51 2 82 188 110 221 2.04e-28 110
MS.gene39643.t1 MTR_8g022820 50.000 112 51 2 82 188 110 221 2.04e-28 110
MS.gene39643.t1 MTR_8g022820 50.000 112 51 2 82 188 109 220 2.16e-28 110
MS.gene39643.t1 MTR_5g009620 57.009 107 36 4 94 194 110 212 4.56e-28 108
MS.gene39643.t1 MTR_2g435590 69.863 73 21 1 81 152 80 152 7.77e-28 106
MS.gene39643.t1 MTR_3g090760 53.333 105 44 3 94 195 111 213 1.17e-26 105
MS.gene39643.t1 MTR_4g078710 52.688 93 29 1 96 188 28 105 1.25e-26 102
MS.gene39643.t1 MTR_2g078680 59.259 81 33 0 80 160 15 95 2.13e-26 101
MS.gene39643.t1 MTR_2g014340 70.312 64 19 0 96 159 19 82 4.75e-26 100
MS.gene39643.t1 MTR_1g070070 69.444 72 15 2 88 152 7 78 2.64e-25 97.1
MS.gene39643.t1 MTR_3g053690 61.429 70 27 0 93 162 24 93 1.31e-24 97.4
MS.gene39643.t1 MTR_2g015040 50.000 104 39 3 61 153 20 121 1.49e-24 95.5
MS.gene39643.t1 MTR_1g028560 66.667 75 23 1 93 167 112 184 1.65e-24 99.4
MS.gene39643.t1 MTR_5g085100 67.188 64 21 0 95 158 45 108 3.76e-24 97.4
MS.gene39643.t1 MTR_2g015050 49.138 116 48 5 53 160 85 197 4.56e-24 97.1
MS.gene39643.t1 MTR_7g081815 59.494 79 31 1 94 171 59 137 8.61e-24 94.7
MS.gene39643.t1 MTR_4g054740 41.667 132 57 4 31 159 49 163 1.45e-23 94.7
MS.gene39643.t1 MTR_8g099215 62.338 77 27 1 94 168 105 181 1.50e-23 96.3
MS.gene39643.t1 MTR_1g048610 44.286 140 59 6 31 160 30 160 1.55e-23 94.7
MS.gene39643.t1 MTR_4g088005 68.852 61 18 1 93 152 54 114 1.82e-23 91.7
MS.gene39643.t1 MTR_7g096700 68.000 75 21 2 81 152 3 77 3.15e-23 91.7
MS.gene39643.t1 MTR_4g100420 69.841 63 18 1 92 153 153 215 4.51e-23 95.1
MS.gene39643.t1 MTR_7g081805 59.494 79 31 1 94 171 59 137 4.96e-23 92.8
MS.gene39643.t1 MTR_5g085070 64.062 64 23 0 95 158 50 113 7.74e-23 94.0
MS.gene39643.t1 MTR_1g090170 37.342 158 80 4 6 152 59 208 8.76e-23 94.4
MS.gene39643.t1 MTR_8g006840 68.254 63 19 1 96 157 125 187 9.05e-23 92.0
MS.gene39643.t1 MTR_1g090170 38.667 150 73 4 14 152 154 295 1.34e-22 95.1
MS.gene39643.t1 MTR_4g100450 61.538 78 26 2 80 153 135 212 1.37e-22 93.6
MS.gene39643.t1 MTR_7g081795 68.333 60 18 1 94 152 58 117 1.46e-22 91.7
MS.gene39643.t1 MTR_3g102100 45.714 105 47 3 50 152 5 101 1.65e-22 90.5
MS.gene39643.t1 MTR_1g069985 58.333 84 31 3 82 162 62 144 1.87e-22 91.3
MS.gene39643.t1 MTR_1g074310 60.563 71 27 1 83 152 8 78 1.95e-22 89.4
MS.gene39643.t1 MTR_4g100380 72.131 61 16 1 94 153 143 203 2.23e-22 92.4
MS.gene39643.t1 MTR_4g010640 69.355 62 19 0 94 155 5 66 2.33e-22 91.3
MS.gene39643.t1 MTR_8g006825 59.211 76 26 2 94 168 94 165 3.16e-22 90.5
MS.gene39643.t1 MTR_3g098580 41.216 148 53 2 5 152 19 132 4.29e-22 91.7
MS.gene39643.t1 MTR_4g114570 65.625 64 22 0 94 157 5 68 4.42e-22 90.5
MS.gene39643.t1 MTR_8g006815 58.667 75 28 2 94 167 94 166 5.13e-22 89.7
MS.gene39643.t1 MTR_7g096750 74.576 59 14 1 95 152 19 77 5.37e-22 88.2
MS.gene39643.t1 MTR_2g089170 48.958 96 49 0 96 191 65 160 6.78e-22 89.4
MS.gene39643.t1 MTR_8g090350 66.129 62 21 0 91 152 108 169 7.27e-22 91.3
MS.gene39643.t1 MTR_5g083340 66.129 62 21 0 93 154 82 143 7.34e-22 92.8
MS.gene39643.t1 MTR_4g008860 61.290 62 24 0 91 152 3 64 7.62e-22 89.4
MS.gene39643.t1 MTR_8g102800 43.434 99 54 1 62 158 1 99 9.06e-22 90.1
MS.gene39643.t1 MTR_5g062700 60.274 73 29 0 80 152 157 229 1.20e-21 92.0
MS.gene39643.t1 MTR_5g082950 61.765 68 26 0 84 151 54 121 1.30e-21 91.3
MS.gene39643.t1 MTR_2g438180 62.687 67 24 1 87 152 5 71 2.20e-21 86.3
MS.gene39643.t1 MTR_1g074230 72.881 59 15 1 95 152 18 76 2.53e-21 86.3
MS.gene39643.t1 MTR_2g014300 70.175 57 17 0 96 152 15 71 3.12e-21 87.0
MS.gene39643.t1 MTR_5g075570 57.971 69 29 0 91 159 119 187 3.42e-21 89.4
MS.gene39643.t1 MTR_2g103700 62.687 67 25 0 94 160 5 71 3.84e-21 87.0
MS.gene39643.t1 MTR_3g074130 69.492 59 18 0 94 152 148 206 3.88e-21 90.1
MS.gene39643.t1 MTR_4g054360 68.657 67 18 2 96 159 124 190 4.61e-21 89.0
MS.gene39643.t1 MTR_6g088405 60.317 63 25 0 96 158 44 106 5.17e-21 87.8
MS.gene39643.t1 MTR_7g092190 65.517 58 20 0 95 152 29 86 6.09e-21 89.0
MS.gene39643.t1 MTR_7g046260 49.351 77 39 0 82 158 47 123 6.35e-21 87.8
MS.gene39643.t1 MTR_4g054860 60.811 74 26 2 89 159 124 197 7.17e-21 88.6
MS.gene39643.t1 MTR_1g090290 56.338 71 30 1 84 153 101 171 7.94e-21 86.7
MS.gene39643.t1 MTR_3g095190 81.667 60 11 0 93 152 167 226 9.45e-21 89.4
MS.gene39643.t1 MTR_2g101340 52.439 82 35 2 81 158 22 103 1.30e-20 86.3
MS.gene39643.t1 MTR_1g070020 53.488 86 37 2 80 162 54 139 1.34e-20 86.7
MS.gene39643.t1 MTR_3g106290 61.290 62 24 0 91 152 3 64 2.14e-20 85.5
MS.gene39643.t1 MTR_1g070035 42.636 129 54 4 41 162 31 146 3.66e-20 85.5
MS.gene39643.t1 MTR_1g070015 60.274 73 26 2 93 162 81 153 3.77e-20 85.5
MS.gene39643.t1 MTR_2g090235 67.797 59 19 0 94 152 216 274 4.14e-20 88.2
MS.gene39643.t1 MTR_8g069360 55.714 70 31 0 95 164 43 112 4.70e-20 88.2
MS.gene39643.t1 MTR_4g119270 50.000 76 38 0 80 155 37 112 6.13e-20 87.0
MS.gene39643.t1 MTR_1g019110 59.322 59 24 0 94 152 42 100 8.45e-20 83.6
MS.gene39643.t1 MTR_2g019750 39.831 118 65 2 83 194 37 154 8.76e-20 85.9
MS.gene39643.t1 MTR_5g083330 57.534 73 28 1 84 156 26 95 1.25e-19 85.5
MS.gene39643.t1 MTR_1g070000 54.321 81 34 2 85 162 73 153 1.27e-19 84.0
MS.gene39643.t1 MTR_7g011630 56.164 73 31 1 89 160 35 107 1.54e-19 86.7
MS.gene39643.t1 MTR_4g100650 55.556 63 28 0 90 152 68 130 1.69e-19 84.3
MS.gene39643.t1 MTR_6g012970 47.826 92 46 2 90 179 32 123 1.97e-19 86.3
MS.gene39643.t1 MTR_1g069960 72.581 62 16 1 92 152 23 84 2.39e-19 81.6
MS.gene39643.t1 MTR_3g110205 57.353 68 26 1 88 152 32 99 2.43e-19 82.4
MS.gene39643.t1 MTR_1g070045 57.333 75 29 2 91 162 61 135 2.70e-19 82.0
MS.gene39643.t1 MTR_5g016750 55.000 60 27 0 93 152 22 81 3.07e-19 82.0
MS.gene39643.t1 MTR_8g085960 55.072 69 28 1 86 151 12 80 3.41e-19 83.2
MS.gene39643.t1 MTR_0939s0010 62.903 62 23 0 96 157 65 126 3.85e-19 82.0
MS.gene39643.t1 MTR_8g013860 57.143 63 27 0 96 158 47 109 5.03e-19 82.0
MS.gene39643.t1 MTR_4g111915 56.716 67 29 0 90 156 47 113 5.93e-19 80.1
MS.gene39643.t1 MTR_1g069940 67.123 73 21 2 93 162 92 164 6.48e-19 82.4
MS.gene39643.t1 MTR_1g074250 68.333 60 17 1 95 152 18 77 6.77e-19 79.7
MS.gene39643.t1 MTR_2g016730 52.857 70 33 0 84 153 11 80 7.37e-19 84.0
MS.gene39643.t1 MTR_5g012910 55.556 63 28 0 96 158 28 90 7.87e-19 80.9
MS.gene39643.t1 MTR_5g032820 54.667 75 34 0 95 169 45 119 8.02e-19 84.0
MS.gene39643.t1 MTR_6g033255 61.176 85 32 1 81 164 4 88 1.07e-18 81.3
MS.gene39643.t1 MTR_7g085810 52.941 68 32 0 84 151 18 85 1.19e-18 82.0
MS.gene39643.t1 MTR_4g112490 53.333 75 35 0 82 156 39 113 1.22e-18 80.9
MS.gene39643.t1 MTR_4g082345 58.065 62 26 0 90 151 42 103 1.25e-18 83.2
MS.gene39643.t1 MTR_1g014780 52.239 67 32 0 86 152 28 94 1.36e-18 81.6
MS.gene39643.t1 MTR_1g069945 67.123 73 21 2 93 162 98 170 2.72e-18 80.9
MS.gene39643.t1 MTR_1g043350 57.831 83 32 2 82 161 68 150 2.76e-18 80.5
MS.gene39643.t1 MTR_8g023680 64.151 53 19 0 90 142 110 162 2.94e-18 82.4
MS.gene39643.t1 MTR_1g014860 55.738 61 27 0 92 152 18 78 2.99e-18 80.5
MS.gene39643.t1 MTR_1g014820 55.738 61 27 0 92 152 23 83 3.39e-18 81.3
MS.gene39643.t1 MTR_7g084370 66.667 57 19 0 95 151 41 97 3.43e-18 81.3
MS.gene39643.t1 MTR_8g006410 55.556 63 28 0 96 158 52 114 3.43e-18 80.1
MS.gene39643.t1 MTR_6g029180 52.941 68 32 0 84 151 21 88 3.55e-18 81.6
MS.gene39643.t1 MTR_7g096810 67.188 64 20 1 90 152 7 70 4.10e-18 77.8
MS.gene39643.t1 MTR_7g096780 66.667 75 22 2 90 161 79 153 6.13e-18 79.7
MS.gene39643.t1 MTR_1g014800 55.932 59 26 0 94 152 29 87 7.50e-18 79.3
MS.gene39643.t1 MTR_7g096830 42.759 145 54 5 93 211 95 236 7.97e-18 79.7
MS.gene39643.t1 MTR_7g117690 56.140 57 25 0 96 152 28 84 9.48e-18 77.8
MS.gene39643.t1 MTR_8g032610 53.030 66 31 0 89 154 20 85 1.79e-17 79.7
MS.gene39643.t1 MTR_7g070220 60.317 63 18 1 96 151 78 140 1.85e-17 80.9
MS.gene39643.t1 MTR_1g074370 47.826 115 48 4 91 198 68 177 7.92e-17 76.3
MS.gene39643.t1 MTR_8g027465 56.140 57 25 0 96 152 39 95 1.27e-16 75.1
MS.gene39643.t1 MTR_3g112440 48.039 102 49 2 96 193 39 140 1.38e-16 75.9
MS.gene39643.t1 MTR_2g043050 51.562 64 31 0 89 152 12 75 1.59e-16 75.5
MS.gene39643.t1 MTR_1g006660 55.556 81 33 1 81 158 29 109 2.50e-16 75.9
MS.gene39643.t1 MTR_4g035430 47.761 67 35 0 86 152 22 88 2.66e-16 75.1
MS.gene39643.t1 MTR_2g043030 50.000 64 32 0 89 152 12 75 5.47e-16 73.9
MS.gene39643.t1 MTR_1g101600 60.714 56 22 0 96 151 41 96 8.86e-16 73.2
MS.gene39643.t1 MTR_1g097190 46.753 77 38 1 83 156 10 86 1.11e-15 71.6
MS.gene39643.t1 MTR_3g105510 50.820 61 30 0 91 151 32 92 1.98e-15 73.2
MS.gene39643.t1 MTR_1g040430 63.462 52 18 1 103 153 118 169 2.00e-15 72.4
MS.gene39643.t1 MTR_3g017420 62.000 50 19 0 103 152 2 51 2.29e-15 68.9
MS.gene39643.t1 MTR_6g465530 54.412 68 30 1 84 151 22 88 2.48e-15 72.0
MS.gene39643.t1 MTR_1g110970 54.545 55 25 0 89 143 90 144 2.70e-15 73.9
MS.gene39643.t1 MTR_1g105400 53.704 54 25 0 89 142 108 161 4.04e-15 73.6
MS.gene39643.t1 MTR_6g465510 52.941 68 31 1 84 151 22 88 4.40e-15 71.6
MS.gene39643.t1 MTR_1g012470 63.934 61 22 0 93 153 4 64 7.83e-15 70.9
MS.gene39643.t1 MTR_8g023700 61.702 47 18 0 96 142 117 163 7.84e-15 72.8
MS.gene39643.t1 MTR_2g043040 48.438 64 33 0 89 152 12 75 8.02e-15 71.2
MS.gene39643.t1 MTR_6g466130 47.945 73 37 1 80 151 49 121 8.61e-15 71.2
MS.gene39643.t1 MTR_6g465690 51.471 68 32 1 84 151 52 118 9.97e-15 71.6
MS.gene39643.t1 MTR_6g088425 60.317 63 25 0 96 158 49 111 1.03e-14 71.2
MS.gene39643.t1 MTR_6g465430 60.714 56 22 0 96 151 54 109 1.30e-14 70.9
MS.gene39643.t1 MTR_5g008590 58.730 63 26 0 96 158 11 73 1.37e-14 69.7
MS.gene39643.t1 MTR_3g107380 67.213 61 20 0 94 154 6 66 1.59e-14 70.1
MS.gene39643.t1 MTR_6g037610 82.000 50 9 0 103 152 187 236 2.36e-14 71.6
MS.gene39643.t1 MTR_1g023170 58.462 65 27 0 96 160 40 104 2.53e-14 70.5
MS.gene39643.t1 MTR_1g098460 82.000 50 9 0 103 152 146 195 2.59e-14 71.2
MS.gene39643.t1 MTR_6g465460 58.929 56 23 0 96 151 54 109 2.61e-14 70.5
MS.gene39643.t1 MTR_2g043020 46.875 64 34 0 89 152 12 75 2.87e-14 69.3
MS.gene39643.t1 MTR_5g008540 50.000 62 31 0 98 159 26 87 2.93e-14 66.6
MS.gene39643.t1 MTR_6g466000 57.143 56 24 0 96 151 57 112 2.95e-14 69.7
MS.gene39643.t1 MTR_6g465850 57.143 56 24 0 96 151 63 118 3.04e-14 70.5
MS.gene39643.t1 MTR_6g465450 57.143 56 24 0 96 151 54 109 3.38e-14 69.7
MS.gene39643.t1 MTR_7g028925 52.459 61 26 1 92 152 25 82 3.95e-14 66.2
MS.gene39643.t1 MTR_6g466020 53.571 56 26 0 96 151 43 98 6.13e-14 67.8
MS.gene39643.t1 MTR_4g102670 56.140 57 24 1 96 152 15 70 6.98e-14 67.4
MS.gene39643.t1 MTR_5g008790 34.921 126 67 4 94 204 16 141 1.00e-13 67.0
MS.gene39643.t1 MTR_6g465420 57.143 56 24 0 96 151 54 109 1.83e-13 68.2
MS.gene39643.t1 MTR_5g085125 49.275 69 35 0 95 163 15 83 2.18e-13 66.2
MS.gene39643.t1 MTR_5g009410 62.687 67 25 0 93 159 114 180 7.50e-13 67.0
MS.gene39643.t1 MTR_1g093600 36.364 121 56 2 30 150 17 116 1.07e-12 66.6
MS.gene39643.t1 MTR_5g057810 50.000 68 33 1 95 161 87 154 1.97e-12 65.5
MS.gene39643.t1 MTR_5g057647 50.000 68 33 1 95 161 87 154 1.97e-12 65.5
MS.gene39643.t1 MTR_3g105480 51.852 54 26 0 98 151 33 86 1.99e-12 64.7
MS.gene39643.t1 MTR_5g008470 47.826 69 31 1 95 158 69 137 4.32e-12 62.8
MS.gene39643.t1 MTR_3g072610 52.239 67 30 1 93 157 22 88 7.01e-12 63.2
MS.gene39643.t1 MTR_5g058470 56.452 62 26 1 93 153 93 154 1.62e-11 62.8
MS.gene39643.t1 MTR_5g053920 47.826 69 33 2 95 162 65 131 3.40e-11 62.4
MS.gene39643.t1 MTR_1g101550 58.621 58 23 1 95 152 56 112 6.17e-11 60.5
MS.gene39643.t1 MTR_5g008550 44.737 76 42 0 83 158 8 83 6.49e-11 59.7
MS.gene39643.t1 MTR_5g010940 50.000 62 25 1 96 151 54 115 6.52e-11 60.5
MS.gene39643.t1 MTR_5g010910 50.000 62 25 1 96 151 49 110 7.29e-11 60.1
MS.gene39643.t1 MTR_2g085015 49.153 59 28 2 96 152 47 105 8.33e-11 60.1
MS.gene39643.t1 MTR_3g062440 50.685 73 34 2 96 166 115 187 8.72e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene39643.t1 AT4G34410 45.652 184 60 4 5 155 19 195 1.47e-37 132
MS.gene39643.t1 AT5G67000 41.379 145 68 2 6 150 48 175 2.24e-30 111
MS.gene39643.t1 AT5G13330 66.216 74 22 1 82 152 22 95 4.38e-29 108
MS.gene39643.t1 AT2G33710 80.000 60 12 0 93 152 67 126 5.07e-29 108
MS.gene39643.t1 AT2G33710 80.000 60 12 0 93 152 67 126 5.75e-29 108
MS.gene39643.t1 AT2G47520 76.562 64 14 1 90 152 43 106 6.16e-29 107
MS.gene39643.t1 AT4G11140 81.356 59 11 0 94 152 85 143 8.65e-29 109
MS.gene39643.t1 AT5G61890 40.260 154 57 5 5 152 22 146 1.07e-28 108
MS.gene39643.t1 AT3G16770 66.667 72 24 0 81 152 64 135 4.22e-28 107
MS.gene39643.t1 AT4G27950 52.336 107 34 2 91 197 113 202 3.26e-27 106
MS.gene39643.t1 AT1G72360 58.667 75 31 0 78 152 7 81 4.05e-26 100
MS.gene39643.t1 AT4G23750 73.770 61 16 0 93 153 119 179 5.26e-26 103
MS.gene39643.t1 AT4G23750 73.770 61 16 0 93 153 119 179 5.26e-26 103
MS.gene39643.t1 AT1G72360 67.188 64 21 0 89 152 67 130 1.04e-25 101
MS.gene39643.t1 AT1G72360 67.188 64 21 0 89 152 69 132 1.10e-25 101
MS.gene39643.t1 AT3G15210 57.831 83 34 1 74 156 4 85 1.10e-25 100
MS.gene39643.t1 AT5G44210 68.657 67 21 0 91 157 28 94 1.29e-25 99.4
MS.gene39643.t1 AT1G03800 63.636 66 24 0 89 154 46 111 4.24e-25 99.4
MS.gene39643.t1 AT5G51190 66.667 66 21 1 89 153 65 130 6.56e-25 98.2
MS.gene39643.t1 AT1G28370 74.138 58 15 0 95 152 57 114 9.56e-25 97.1
MS.gene39643.t1 AT5G53290 73.333 60 16 0 94 153 123 182 1.27e-24 100
MS.gene39643.t1 AT1G28370 74.138 58 15 0 95 152 19 76 1.66e-24 95.5
MS.gene39643.t1 AT3G61630 54.348 92 23 2 83 155 80 171 2.98e-24 98.2
MS.gene39643.t1 AT5G50080 48.299 147 52 4 16 152 1 133 1.11e-23 94.7
MS.gene39643.t1 AT5G47230 73.016 63 16 1 92 153 152 214 1.30e-23 96.3
MS.gene39643.t1 AT5G50080 72.973 74 14 1 79 152 75 142 1.75e-23 94.4
MS.gene39643.t1 AT5G65130 40.278 144 64 4 94 219 109 248 2.00e-23 95.5
MS.gene39643.t1 AT5G65130 40.278 144 64 4 94 219 111 250 2.06e-23 95.5
MS.gene39643.t1 AT1G50640 69.492 59 18 0 95 153 27 85 4.61e-23 93.2
MS.gene39643.t1 AT1G43160 45.833 144 41 3 19 152 1 117 6.46e-23 92.0
MS.gene39643.t1 AT3G20310 46.809 94 44 1 95 188 26 113 8.76e-23 93.2
MS.gene39643.t1 AT2G44840 47.000 100 50 2 87 185 83 180 1.13e-22 92.4
MS.gene39643.t1 AT5G47220 72.131 61 16 1 94 153 115 175 1.35e-22 92.4
MS.gene39643.t1 AT1G22985 66.667 72 19 2 92 158 71 142 1.49e-22 90.1
MS.gene39643.t1 AT5G43410 74.576 59 14 1 95 152 14 72 1.55e-22 89.4
MS.gene39643.t1 AT5G07310 78.333 60 13 0 93 152 89 148 1.83e-22 92.4
MS.gene39643.t1 AT4G17500 72.131 61 16 1 94 153 146 206 2.02e-22 92.4
MS.gene39643.t1 AT4G17490 69.841 63 18 1 92 153 133 195 2.27e-22 92.8
MS.gene39643.t1 AT1G36060 65.625 64 22 0 91 154 138 201 2.54e-22 93.2
MS.gene39643.t1 AT2G22200 66.129 62 21 0 91 152 66 127 2.97e-22 92.0
MS.gene39643.t1 AT4G13620 65.672 67 23 0 94 160 230 296 3.19e-22 94.0
MS.gene39643.t1 AT2G31230 63.514 74 24 2 92 162 82 155 3.23e-22 91.7
MS.gene39643.t1 AT2G23340 59.375 64 26 0 89 152 21 84 3.45e-22 89.7
MS.gene39643.t1 AT1G22190 67.742 62 20 0 91 152 78 139 3.89e-22 91.7
MS.gene39643.t1 AT4G39780 41.935 124 66 3 30 152 31 149 3.94e-22 92.0
MS.gene39643.t1 AT3G23240 59.211 76 28 2 90 162 76 151 7.58e-22 90.1
MS.gene39643.t1 AT4G28140 54.023 87 31 1 94 171 141 227 1.06e-21 91.3
MS.gene39643.t1 AT2G46310 53.846 91 41 1 95 184 98 188 1.17e-21 90.9
MS.gene39643.t1 AT2G20880 62.162 74 25 1 94 167 185 255 1.18e-21 91.7
MS.gene39643.t1 AT5G25390 60.000 70 28 0 94 163 5 74 1.38e-21 88.6
MS.gene39643.t1 AT3G23230 71.186 59 16 1 95 152 19 77 1.39e-21 87.0
MS.gene39643.t1 AT1G78080 67.742 62 20 0 91 152 147 208 1.44e-21 91.3
MS.gene39643.t1 AT1G15360 66.667 60 20 0 94 153 5 64 1.59e-21 88.6
MS.gene39643.t1 AT1G15360 66.667 60 20 0 94 153 5 64 1.59e-21 88.6
MS.gene39643.t1 AT4G06746 52.113 71 34 0 82 152 22 92 2.17e-21 87.0
MS.gene39643.t1 AT5G11590 53.086 81 35 1 81 158 33 113 2.42e-21 89.0
MS.gene39643.t1 AT4G36900 59.375 64 25 1 89 152 24 86 2.54e-21 88.2
MS.gene39643.t1 AT4G32800 53.846 78 32 1 81 158 8 81 2.86e-21 88.6
MS.gene39643.t1 AT5G61600 63.934 61 21 1 94 153 86 146 2.89e-21 89.0
MS.gene39643.t1 AT5G25190 61.290 62 24 0 91 152 3 64 3.20e-21 87.4
MS.gene39643.t1 AT5G05410 66.129 62 21 0 96 157 79 140 3.33e-21 89.7
MS.gene39643.t1 AT5G07580 54.795 73 32 1 82 153 96 168 3.39e-21 87.8
MS.gene39643.t1 AT5G05410 66.129 62 21 0 96 157 79 140 4.47e-21 90.1
MS.gene39643.t1 AT1G71130 56.471 85 29 2 88 167 71 152 4.48e-21 86.3
MS.gene39643.t1 AT1G28360 68.966 58 18 0 95 152 11 68 5.54e-21 87.0
MS.gene39643.t1 AT5G19790 58.571 70 29 0 82 151 8 77 8.14e-21 87.8
MS.gene39643.t1 AT1G75490 61.538 65 22 1 96 160 42 103 9.47e-21 86.7
MS.gene39643.t1 AT5G25810 55.556 72 32 0 81 152 21 92 1.17e-20 86.7
MS.gene39643.t1 AT1G46768 54.795 73 31 1 80 152 17 87 1.20e-20 84.7
MS.gene39643.t1 AT1G46768 54.795 73 31 1 80 152 17 87 1.24e-20 85.1
MS.gene39643.t1 AT1G46768 54.795 73 31 1 80 152 17 87 1.24e-20 85.1
MS.gene39643.t1 AT5G64750 78.000 50 11 0 103 152 192 241 1.59e-20 89.0
MS.gene39643.t1 AT5G67190 46.154 91 35 2 89 179 15 91 1.68e-20 85.5
MS.gene39643.t1 AT2G20350 41.844 141 63 3 7 147 17 138 3.41e-20 84.0
MS.gene39643.t1 AT3G57600 61.667 60 23 0 95 154 27 86 5.12e-20 86.3
MS.gene39643.t1 AT5G25390 58.571 70 26 1 94 163 5 71 6.24e-20 84.0
MS.gene39643.t1 AT5G13910 57.534 73 28 1 86 155 7 79 7.55e-20 84.3
MS.gene39643.t1 AT1G71450 53.333 75 35 0 84 158 12 86 7.59e-20 84.0
MS.gene39643.t1 AT1G21910 54.839 62 28 0 96 157 50 111 8.48e-20 84.7
MS.gene39643.t1 AT3G16280 63.158 57 21 0 96 152 61 117 8.80e-20 84.7
MS.gene39643.t1 AT3G16280 63.158 57 21 0 96 152 79 135 1.01e-19 85.1
MS.gene39643.t1 AT2G25820 63.158 57 21 0 96 152 26 82 1.02e-19 84.3
MS.gene39643.t1 AT4G16750 56.338 71 29 1 84 152 26 96 1.36e-19 83.2
MS.gene39643.t1 AT2G44940 54.286 70 32 0 83 152 87 156 1.37e-19 85.5
MS.gene39643.t1 AT3G50260 55.385 65 28 1 88 152 14 77 1.60e-19 82.0
MS.gene39643.t1 AT4G18450 67.742 62 18 2 94 153 108 169 1.76e-19 85.1
MS.gene39643.t1 AT2G35700 61.404 57 22 0 96 152 45 101 1.80e-19 83.2
MS.gene39643.t1 AT1G12980 66.667 57 19 0 95 151 56 112 3.39e-19 84.7
MS.gene39643.t1 AT5G18560 51.429 70 34 0 82 151 41 110 4.73e-19 84.7
MS.gene39643.t1 AT1G01250 38.739 111 61 2 96 202 45 152 4.92e-19 82.0
MS.gene39643.t1 AT3G11020 64.912 57 20 0 96 152 78 134 5.23e-19 84.3
MS.gene39643.t1 AT3G60490 56.452 62 27 0 91 152 66 127 9.29e-19 82.4
MS.gene39643.t1 AT5G18450 64.286 56 20 0 96 151 34 89 3.55e-18 81.6
MS.gene39643.t1 AT1G24590 66.667 57 19 0 95 151 57 113 4.30e-18 81.6
MS.gene39643.t1 AT2G40340 59.322 59 24 0 96 154 14 72 4.46e-18 81.3
MS.gene39643.t1 AT2G40340 59.322 59 24 0 96 154 14 72 4.46e-18 81.3
MS.gene39643.t1 AT2G40340 59.322 59 24 0 96 154 14 72 4.46e-18 81.3
MS.gene39643.t1 AT3G14230 66.197 71 24 0 82 152 110 180 4.47e-18 82.0
MS.gene39643.t1 AT3G14230 66.197 71 24 0 82 152 114 184 4.72e-18 82.0
MS.gene39643.t1 AT1G12890 55.714 70 31 0 82 151 7 76 4.84e-18 79.7
MS.gene39643.t1 AT3G14230 66.197 71 24 0 82 152 109 179 4.90e-18 82.0
MS.gene39643.t1 AT5G67010 35.772 123 56 3 10 129 21 123 6.32e-18 78.2
MS.gene39643.t1 AT1G53910 64.000 75 25 1 85 159 114 186 7.12e-18 81.3
MS.gene39643.t1 AT1G53910 64.000 75 25 1 85 159 114 186 7.12e-18 81.3
MS.gene39643.t1 AT1G53910 64.000 75 25 1 85 159 112 184 7.30e-18 81.3
MS.gene39643.t1 AT1G06160 65.278 72 22 2 94 162 80 151 9.28e-18 79.7
MS.gene39643.t1 AT2G40340 59.322 59 24 0 96 154 79 137 1.61e-17 80.5
MS.gene39643.t1 AT1G28160 62.295 61 23 0 95 155 38 98 1.80e-17 79.0
MS.gene39643.t1 AT2G40340 59.322 59 24 0 96 154 72 130 1.84e-17 80.1
MS.gene39643.t1 AT2G40340 59.322 59 24 0 96 154 72 130 2.00e-17 79.3
MS.gene39643.t1 AT2G40350 55.932 59 26 0 96 154 74 132 2.02e-17 77.0
MS.gene39643.t1 AT2G40350 55.932 59 26 0 96 154 67 125 2.36e-17 76.6
MS.gene39643.t1 AT5G21960 60.345 58 23 0 95 152 6 63 2.73e-17 77.8
MS.gene39643.t1 AT4G25470 48.235 85 36 1 75 151 22 106 3.72e-17 77.4
MS.gene39643.t1 AT1G74930 42.045 88 48 1 82 166 7 94 6.37e-17 76.3
MS.gene39643.t1 AT4G25490 62.500 56 21 0 96 151 48 103 7.25e-17 76.6
MS.gene39643.t1 AT2G36450 50.667 75 33 2 96 169 15 86 8.00e-17 75.9
MS.gene39643.t1 AT1G19210 55.000 60 27 0 93 152 9 68 1.27e-16 75.1
MS.gene39643.t1 AT3G23220 64.286 70 24 1 92 160 10 79 1.49e-16 73.9
MS.gene39643.t1 AT4G31060 48.000 75 38 1 78 152 10 83 1.57e-16 75.1
MS.gene39643.t1 AT1G68550 68.000 50 16 0 93 142 110 159 1.59e-16 77.4
MS.gene39643.t1 AT1G68550 68.000 50 16 0 93 142 110 159 1.59e-16 77.4
MS.gene39643.t1 AT4G25480 45.882 85 38 1 75 151 22 106 2.16e-16 75.5
MS.gene39643.t1 AT5G51990 41.593 113 54 3 82 192 38 140 3.22e-16 75.1
MS.gene39643.t1 AT2G40220 61.111 72 26 1 82 151 39 110 9.81e-16 75.1
MS.gene39643.t1 AT1G77640 46.591 88 43 2 86 169 32 119 1.69e-15 73.6
MS.gene39643.t1 AT1G04370 69.355 62 18 1 92 152 16 77 1.84e-15 70.9
MS.gene39643.t1 AT1G53170 68.333 60 19 0 95 154 30 89 2.08e-15 72.0
MS.gene39643.t1 AT5G11190 56.579 76 28 1 94 164 5 80 4.47e-15 71.2
MS.gene39643.t1 AT1G77200 54.286 70 32 0 83 152 30 99 4.61e-15 72.4
MS.gene39643.t1 AT1G64380 54.878 82 30 1 91 172 131 205 6.18e-14 70.1
MS.gene39643.t1 AT5G61590 56.338 71 30 1 84 153 95 165 7.42e-14 68.2
MS.gene39643.t1 AT1G22810 38.384 99 52 3 93 188 11 103 9.83e-14 66.6
MS.gene39643.t1 AT2G38340 59.091 66 19 1 95 152 69 134 1.63e-13 67.8
MS.gene39643.t1 AT1G71520 41.975 81 42 2 92 167 10 90 2.20e-13 65.5
MS.gene39643.t1 AT1G63030 47.368 76 35 1 81 151 10 85 7.59e-13 65.1
MS.gene39643.t1 AT1G63030 47.368 76 35 1 81 151 10 85 7.59e-13 65.1
MS.gene39643.t1 AT3G25890 64.444 45 16 0 98 142 133 177 8.45e-13 67.0
MS.gene39643.t1 AT3G25890 64.444 45 16 0 98 142 133 177 8.45e-13 67.0
MS.gene39643.t1 AT1G49120 61.702 47 18 0 96 142 87 133 2.14e-12 65.5
MS.gene39643.t1 AT1G12610 51.786 56 27 0 96 151 30 85 2.62e-12 63.9
MS.gene39643.t1 AT1G33760 52.239 67 32 0 96 162 20 86 4.06e-12 63.2
MS.gene39643.t1 AT1G68840 46.753 77 39 1 80 156 49 123 4.39e-12 64.7
MS.gene39643.t1 AT1G68840 46.753 77 39 1 80 156 49 123 4.39e-12 64.7
MS.gene39643.t1 AT1G44830 54.545 66 29 1 94 158 33 98 9.81e-12 62.4
MS.gene39643.t1 AT2G39250 42.105 95 47 3 82 170 95 187 4.20e-11 61.2

Find 69 sgRNAs with CRISPR-Local

Find 78 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACAACTAATGAGGTTTA+TGG 0.166648 4.2:-24672246 MS.gene39643:CDS
ATTGAGACAAATATGGGATT+TGG 0.243614 4.2:-24672317 MS.gene39643:CDS
GGCAGAGGCCATGGGGAAAA+TGG 0.260541 4.2:-24672568 MS.gene39643:CDS
AATGCAAATTGAGACAAATA+TGG 0.265350 4.2:-24672324 MS.gene39643:CDS
TATGGGATTTGGGAATAATA+AGG 0.286148 4.2:-24672306 MS.gene39643:CDS
TCCAAAGGGACAACCACTTC+TGG 0.329688 4.2:+24672377 None:intergenic
ATCCTGCTATGTTGCATTCT+CGG 0.340084 4.2:+24672672 None:intergenic
CGAGACGTGCGGTCCGTGTT+TGG 0.360884 4.2:-24672526 MS.gene39643:CDS
TTGAGACAAATATGGGATTT+GGG 0.361286 4.2:-24672316 MS.gene39643:CDS
GCCAGAAGTGGTTGTCCCTT+TGG 0.361757 4.2:-24672378 MS.gene39643:CDS
TGTCCCTTTGGAGGATATAA+AGG 0.371554 4.2:-24672366 MS.gene39643:CDS
GCAGAGGCCATGGGGAAAAT+GGG 0.401441 4.2:-24672567 MS.gene39643:CDS
CAAGATACCATGTTCACTTC+CGG 0.414333 4.2:+24672695 None:intergenic
AGCTTCTTCCGCCGTGGTAA+AGG 0.419719 4.2:+24672496 None:intergenic
GAGGAGTGAGGCAGAGGCCA+TGG 0.424131 4.2:-24672577 MS.gene39643:CDS
CGTGCGGTCCGTGTTTGGCT+CGG 0.435176 4.2:-24672521 MS.gene39643:CDS
TGATCCGTGAGGCAAAATTC+AGG 0.438212 4.2:+24672755 None:intergenic
GGTGAGGGTGGTGGTGGAGA+AGG 0.454388 4.2:+24672856 None:intergenic
GTGCGGTCCGTGTTTGGCTC+GGG 0.455397 4.2:-24672520 MS.gene39643:CDS
ATCGGAGGTGAGGGTGGTGG+TGG 0.456825 4.2:+24672850 None:intergenic
AGGAGTGAGGCAGAGGCCAT+GGG 0.478974 4.2:-24672576 MS.gene39643:CDS
ATGCAAATTGAGACAAATAT+GGG 0.479691 4.2:-24672323 MS.gene39643:CDS
TATGGAAAACGCGGTGGAGG+TGG 0.486810 4.2:+24672778 None:intergenic
AAACGCGGTGGAGGTGGAGC+CGG 0.490820 4.2:+24672784 None:intergenic
TGCAACATAGCAGGATGCTT+AGG 0.493726 4.2:-24672665 MS.gene39643:CDS
AGTACAGAGGAGTGAGGCAG+AGG 0.495675 4.2:-24672583 MS.gene39643:CDS
AAACACGGACCGCACGTCTC+GGG 0.502410 4.2:+24672528 None:intergenic
AGCAGCATTGTCGTAAGCTC+TGG 0.505689 4.2:+24672472 None:intergenic
TGCCGAGAATGCAACATAGC+AGG 0.511948 4.2:-24672674 MS.gene39643:CDS
TTGATCGGAGGTGAGGGTGG+TGG 0.516391 4.2:+24672847 None:intergenic
AGAAGTGGTTGTCCCTTTGG+AGG 0.528380 4.2:-24672375 MS.gene39643:CDS
CAAACACGGACCGCACGTCT+CGG 0.535999 4.2:+24672527 None:intergenic
CGTCCTTTATATCCTCCAAA+GGG 0.548435 4.2:+24672363 None:intergenic
AGGTATGGAAAACGCGGTGG+AGG 0.548473 4.2:+24672775 None:intergenic
CGTGAGGCAAAATTCAGGTA+TGG 0.556005 4.2:+24672760 None:intergenic
GAATTCTTGATCGGAGGTGA+GGG 0.564059 4.2:+24672841 None:intergenic
CAGTTTAGAACGAATAGTGC+CGG 0.564131 4.2:-24672714 MS.gene39643:CDS
TCGTCCTTTATATCCTCCAA+AGG 0.564254 4.2:+24672362 None:intergenic
TAAACTGCTGCTTCCGACAG+TGG 0.564361 4.2:+24672730 None:intergenic
CTCACGGATCACTCCACTGT+CGG 0.568227 4.2:-24672743 MS.gene39643:CDS
TGAGCTTGGCTCTCGGCCCA+CGG 0.568341 4.2:+24672441 None:intergenic
AATGCTGCTATCGAGTTCCG+TGG 0.573830 4.2:-24672458 MS.gene39643:CDS
AACGACGGGAAAATTGAGCT+TGG 0.576286 4.2:+24672427 None:intergenic
TTCTTGATCGGAGGTGAGGG+TGG 0.576817 4.2:+24672844 None:intergenic
AGAATTCTTGATCGGAGGTG+AGG 0.578370 4.2:+24672840 None:intergenic
GGAAAATTGAGCTTGGCTCT+CGG 0.582771 4.2:+24672434 None:intergenic
AGAGATAAGAAGAAGTACAG+AGG 0.590113 4.2:-24672596 MS.gene39643:CDS
AATAGTGCCGGAAGTGAACA+TGG 0.591939 4.2:-24672702 MS.gene39643:CDS
TTAAGCGATTCATCAACGAC+GGG 0.595662 4.2:+24672413 None:intergenic
GCTCTAACCAACGTAGTCTC+CGG 0.597841 4.2:-24672803 MS.gene39643:CDS
GATGGCAGAGAATTCTTGAT+CGG 0.603483 4.2:+24672832 None:intergenic
TGATGAATCGCTTAAGAACG+TGG 0.611709 4.2:-24672405 MS.gene39643:CDS
GGCAGAGAATTCTTGATCGG+AGG 0.620344 4.2:+24672835 None:intergenic
TTGGCTCGGGACCTTTACCA+CGG 0.622839 4.2:-24672507 MS.gene39643:CDS
CTTAAGCGATTCATCAACGA+CGG 0.628790 4.2:+24672412 None:intergenic
AGAAGAAGTACAGAGGAGTG+AGG 0.631217 4.2:-24672589 MS.gene39643:CDS
GAACGTGGAGGAGCCAGAAG+TGG 0.633912 4.2:-24672390 MS.gene39643:CDS
ATGCTGCTATCGAGTTCCGT+GGG 0.636885 4.2:-24672457 MS.gene39643:CDS
TAAAGGTCCCGAGCCAAACA+CGG 0.637276 4.2:+24672513 None:intergenic
GTTGGTTAGAGCAGCGACGA+TGG 0.650660 4.2:+24672814 None:intergenic
GGAGTGAGGCAGAGGCCATG+GGG 0.658766 4.2:-24672575 MS.gene39643:CDS
TCTGGCAGCTTCTTCCGCCG+TGG 0.663632 4.2:+24672490 None:intergenic
GATTCGTGACCCGAGACGTG+CGG 0.666469 4.2:-24672537 MS.gene39643:CDS
TTCAGGTATGGAAAACGCGG+TGG 0.673360 4.2:+24672772 None:intergenic
GGTGGAGCCGGAGACTACGT+TGG 0.715698 4.2:+24672796 None:intergenic
CGACAGTGGAGTGATCCGTG+AGG 0.727066 4.2:+24672744 None:intergenic
AAATTCAGGTATGGAAAACG+CGG 0.727381 4.2:+24672769 None:intergenic
GCTCGGGACCTTTACCACGG+CGG 0.766957 4.2:-24672504 MS.gene39643:CDS
TGAATCGCTTAAGAACGTGG+AGG 0.768895 4.2:-24672402 MS.gene39643:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATAAGGATTGTGATTTT+TGG - chr4.2:24672785-24672804 MS.gene39643:CDS 20.0%
!!! TAATAAGGATTGTGATTTTT+GGG - chr4.2:24672786-24672805 MS.gene39643:CDS 20.0%
! AATGCAAATTGAGACAAATA+TGG - chr4.2:24672753-24672772 MS.gene39643:CDS 25.0%
! ATGCAAATTGAGACAAATAT+GGG - chr4.2:24672754-24672773 MS.gene39643:CDS 25.0%
!!! GTTTTTGTTTTTTCTCTTCA+GGG + chr4.2:24672450-24672469 None:intergenic 25.0%
!!! TGTTTTTGTTTTTTCTCTTC+AGG + chr4.2:24672451-24672470 None:intergenic 25.0%
!!! TTATGGATTTTGATAGAGAT+TGG - chr4.2:24672848-24672867 MS.gene39643:CDS 25.0%
ATTGAGACAAATATGGGATT+TGG - chr4.2:24672760-24672779 MS.gene39643:CDS 30.0%
TATGGGATTTGGGAATAATA+AGG - chr4.2:24672771-24672790 MS.gene39643:CDS 30.0%
TCAACAACTAATGAGGTTTA+TGG - chr4.2:24672831-24672850 MS.gene39643:CDS 30.0%
TTGAGACAAATATGGGATTT+GGG - chr4.2:24672761-24672780 MS.gene39643:CDS 30.0%
! CTGATTTTCAACAACTAATG+AGG - chr4.2:24672824-24672843 MS.gene39643:CDS 30.0%
!!! TGTGATTTTTGGGATAGTAT+CGG - chr4.2:24672796-24672815 MS.gene39643:CDS 30.0%
AAATTCAGGTATGGAAAACG+CGG + chr4.2:24672311-24672330 None:intergenic 35.0%
! AGAGATAAGAAGAAGTACAG+AGG - chr4.2:24672481-24672500 MS.gene39643:CDS 35.0%
ATCCTGCTATGTTGCATTCT+CGG + chr4.2:24672408-24672427 None:intergenic 40.0%
CAAGATACCATGTTCACTTC+CGG + chr4.2:24672385-24672404 None:intergenic 40.0%
CGTCCTTTATATCCTCCAAA+GGG + chr4.2:24672717-24672736 None:intergenic 40.0%
CTTAAGCGATTCATCAACGA+CGG + chr4.2:24672668-24672687 None:intergenic 40.0%
GATGGCAGAGAATTCTTGAT+CGG + chr4.2:24672248-24672267 None:intergenic 40.0%
TCGTCCTTTATATCCTCCAA+AGG + chr4.2:24672718-24672737 None:intergenic 40.0%
TGATGAATCGCTTAAGAACG+TGG - chr4.2:24672672-24672691 MS.gene39643:CDS 40.0%
TTAAGCGATTCATCAACGAC+GGG + chr4.2:24672667-24672686 None:intergenic 40.0%
! CAGTTTAGAACGAATAGTGC+CGG - chr4.2:24672363-24672382 MS.gene39643:CDS 40.0%
! CATACCTGAATTTTGCCTCA+CGG - chr4.2:24672318-24672337 MS.gene39643:CDS 40.0%
! TGTCCCTTTGGAGGATATAA+AGG - chr4.2:24672711-24672730 MS.gene39643:CDS 40.0%
AACGACGGGAAAATTGAGCT+TGG + chr4.2:24672653-24672672 None:intergenic 45.0%
AGAATTCTTGATCGGAGGTG+AGG + chr4.2:24672240-24672259 None:intergenic 45.0%
CGTGAGGCAAAATTCAGGTA+TGG + chr4.2:24672320-24672339 None:intergenic 45.0%
GAATTCTTGATCGGAGGTGA+GGG + chr4.2:24672239-24672258 None:intergenic 45.0%
TGAATCGCTTAAGAACGTGG+AGG - chr4.2:24672675-24672694 MS.gene39643:CDS 45.0%
TGATCCGTGAGGCAAAATTC+AGG + chr4.2:24672325-24672344 None:intergenic 45.0%
TGCAACATAGCAGGATGCTT+AGG - chr4.2:24672412-24672431 MS.gene39643:CDS 45.0%
! AATAGTGCCGGAAGTGAACA+TGG - chr4.2:24672375-24672394 MS.gene39643:CDS 45.0%
! AGAAGAAGTACAGAGGAGTG+AGG - chr4.2:24672488-24672507 MS.gene39643:CDS 45.0%
! GGAAAATTGAGCTTGGCTCT+CGG + chr4.2:24672646-24672665 None:intergenic 45.0%
AATGCTGCTATCGAGTTCCG+TGG - chr4.2:24672619-24672638 MS.gene39643:CDS 50.0%
AGAAGTGGTTGTCCCTTTGG+AGG - chr4.2:24672702-24672721 MS.gene39643:CDS 50.0%
AGCAGCATTGTCGTAAGCTC+TGG + chr4.2:24672608-24672627 None:intergenic 50.0%
ATGCTGCTATCGAGTTCCGT+GGG - chr4.2:24672620-24672639 MS.gene39643:CDS 50.0%
GCTCTAACCAACGTAGTCTC+CGG - chr4.2:24672274-24672293 MS.gene39643:CDS 50.0%
GGCAGAGAATTCTTGATCGG+AGG + chr4.2:24672245-24672264 None:intergenic 50.0%
TAAAGGTCCCGAGCCAAACA+CGG + chr4.2:24672567-24672586 None:intergenic 50.0%
TCCAAAGGGACAACCACTTC+TGG + chr4.2:24672703-24672722 None:intergenic 50.0%
TGCCGAGAATGCAACATAGC+AGG - chr4.2:24672403-24672422 MS.gene39643:CDS 50.0%
TTCAGGTATGGAAAACGCGG+TGG + chr4.2:24672308-24672327 None:intergenic 50.0%
! TAAACTGCTGCTTCCGACAG+TGG + chr4.2:24672350-24672369 None:intergenic 50.0%
AGCTTCTTCCGCCGTGGTAA+AGG + chr4.2:24672584-24672603 None:intergenic 55.0%
AGGTATGGAAAACGCGGTGG+AGG + chr4.2:24672305-24672324 None:intergenic 55.0%
AGTACAGAGGAGTGAGGCAG+AGG - chr4.2:24672494-24672513 MS.gene39643:CDS 55.0%
CTCACGGATCACTCCACTGT+CGG - chr4.2:24672334-24672353 MS.gene39643:CDS 55.0%
GCAGAGGCCATGGGGAAAAT+GGG - chr4.2:24672510-24672529 MS.gene39643:CDS 55.0%
GCCAGAAGTGGTTGTCCCTT+TGG - chr4.2:24672699-24672718 MS.gene39643:CDS 55.0%
GTTGGTTAGAGCAGCGACGA+TGG + chr4.2:24672266-24672285 None:intergenic 55.0%
TATGGAAAACGCGGTGGAGG+TGG + chr4.2:24672302-24672321 None:intergenic 55.0%
TTCTTGATCGGAGGTGAGGG+TGG + chr4.2:24672236-24672255 None:intergenic 55.0%
! TCAGCAGCCCATTTTCCCCA+TGG + chr4.2:24672520-24672539 None:intergenic 55.0%
!! TTGGCTCGGGACCTTTACCA+CGG - chr4.2:24672570-24672589 MS.gene39643:CDS 55.0%
AAACACGGACCGCACGTCTC+GGG + chr4.2:24672552-24672571 None:intergenic 60.0%
AGGAGTGAGGCAGAGGCCAT+GGG - chr4.2:24672501-24672520 MS.gene39643:CDS 60.0%
CAAACACGGACCGCACGTCT+CGG + chr4.2:24672553-24672572 None:intergenic 60.0%
CGACAGTGGAGTGATCCGTG+AGG + chr4.2:24672336-24672355 None:intergenic 60.0%
GAACGTGGAGGAGCCAGAAG+TGG - chr4.2:24672687-24672706 MS.gene39643:CDS 60.0%
GATTCGTGACCCGAGACGTG+CGG - chr4.2:24672540-24672559 MS.gene39643:CDS 60.0%
GGCAGAGGCCATGGGGAAAA+TGG - chr4.2:24672509-24672528 MS.gene39643:CDS 60.0%
TTGATCGGAGGTGAGGGTGG+TGG + chr4.2:24672233-24672252 None:intergenic 60.0%
AAACGCGGTGGAGGTGGAGC+CGG + chr4.2:24672296-24672315 None:intergenic 65.0%
CGAGACGTGCGGTCCGTGTT+TGG - chr4.2:24672551-24672570 MS.gene39643:CDS 65.0%
CGTGCGGTCCGTGTTTGGCT+CGG - chr4.2:24672556-24672575 MS.gene39643:CDS 65.0%
GAGGAGTGAGGCAGAGGCCA+TGG - chr4.2:24672500-24672519 MS.gene39643:CDS 65.0%
GCTCGGGACCTTTACCACGG+CGG - chr4.2:24672573-24672592 MS.gene39643:CDS 65.0%
GGAGTGAGGCAGAGGCCATG+GGG - chr4.2:24672502-24672521 MS.gene39643:CDS 65.0%
GGTGGAGCCGGAGACTACGT+TGG + chr4.2:24672284-24672303 None:intergenic 65.0%
TCTGGCAGCTTCTTCCGCCG+TGG + chr4.2:24672590-24672609 None:intergenic 65.0%
! ATCGGAGGTGAGGGTGGTGG+TGG + chr4.2:24672230-24672249 None:intergenic 65.0%
! GTGCGGTCCGTGTTTGGCTC+GGG - chr4.2:24672557-24672576 MS.gene39643:CDS 65.0%
! TGAGCTTGGCTCTCGGCCCA+CGG + chr4.2:24672639-24672658 None:intergenic 65.0%
!! GGTGAGGGTGGTGGTGGAGA+AGG + chr4.2:24672224-24672243 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 24672211 24672888 24672211 ID=MS.gene39643
chr4.2 mRNA 24672211 24672888 24672211 ID=MS.gene39643.t1;Parent=MS.gene39643
chr4.2 exon 24672211 24672888 24672211 ID=MS.gene39643.t1.exon1;Parent=MS.gene39643.t1
chr4.2 CDS 24672211 24672888 24672211 ID=cds.MS.gene39643.t1;Parent=MS.gene39643.t1
Gene Sequence

>MS.gene39643

ATGAACTACGCCTTCTCCACCACCACCCTCACCTCCGATCAAGAATTCTCTGCCATCGTCGCTGCTCTAACCAACGTAGTCTCCGGCTCCACCTCCACCGCGTTTTCCATACCTGAATTTTGCCTCACGGATCACTCCACTGTCGGAAGCAGCAGTTTAGAACGAATAGTGCCGGAAGTGAACATGGTATCTTGCCGAGAATGCAACATAGCAGGATGCTTAGGATGCAATTTCTTCCCTGAAGAGAAAAAACAAAAACATAAACAAAAAAGAGATAAGAAGAAGTACAGAGGAGTGAGGCAGAGGCCATGGGGAAAATGGGCTGCTGAGATTCGTGACCCGAGACGTGCGGTCCGTGTTTGGCTCGGGACCTTTACCACGGCGGAAGAAGCTGCCAGAGCTTACGACAATGCTGCTATCGAGTTCCGTGGGCCGAGAGCCAAGCTCAATTTTCCCGTCGTTGATGAATCGCTTAAGAACGTGGAGGAGCCAGAAGTGGTTGTCCCTTTGGAGGATATAAAGGACGAGAATATGAATCAAGAAATGCAAATTGAGACAAATATGGGATTTGGGAATAATAAGGATTGTGATTTTTGGGATAGTATCGGAGAAGCTGATTTTCAACAACTAATGAGGTTTATGGATTTTGATAGAGATTGGAACACTTTTAGTTCTTGA
Protein sequence

>MS.gene39643.t1

MNYAFSTTTLTSDQEFSAIVAALTNVVSGSTSTAFSIPEFCLTDHSTVGSSSLERIVPEVNMVSCRECNIAGCLGCNFFPEEKKQKHKQKRDKKKYRGVRQRPWGKWAAEIRDPRRAVRVWLGTFTTAEEAARAYDNAAIEFRGPRAKLNFPVVDESLKNVEEPEVVVPLEDIKDENMNQEMQIETNMGFGNNKDCDFWDSIGEADFQQLMRFMDFDRDWNTFSS