AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene26633

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26633.t1 MTR_4g086160 88.936 235 21 4 1 234 1 231 2.49e-137 385
MS.gene26633.t1 MTR_4g086190 75.546 229 52 3 8 234 4 230 2.54e-114 327
MS.gene26633.t1 MTR_4g086220 73.859 241 47 4 1 234 3 234 3.02e-109 314
MS.gene26633.t1 MTR_4g086165 71.064 235 31 8 7 234 4 208 4.52e-102 295
MS.gene26633.t1 MTR_7g020980 44.776 134 47 3 22 155 1 107 2.02e-30 111
MS.gene26633.t1 MTR_8g092460 72.059 68 19 0 88 155 134 201 2.33e-30 114
MS.gene26633.t1 MTR_7g021010 43.284 134 49 2 22 155 1 107 5.63e-30 110
MS.gene26633.t1 MTR_7g021010 72.308 65 18 0 91 155 4 68 6.58e-30 108
MS.gene26633.t1 MTR_8g022820 52.212 113 40 3 76 188 100 198 2.30e-29 113
MS.gene26633.t1 MTR_8g022820 52.212 113 40 3 76 188 101 199 2.30e-29 113
MS.gene26633.t1 MTR_8g022820 52.212 113 40 3 76 188 101 199 2.30e-29 113
MS.gene26633.t1 MTR_2g105380 70.423 71 20 1 86 155 103 173 7.09e-29 112
MS.gene26633.t1 MTR_1g087920 42.945 163 68 6 89 230 67 225 9.33e-29 110
MS.gene26633.t1 MTR_2g435590 78.125 64 13 1 93 155 89 152 9.49e-29 109
MS.gene26633.t1 MTR_5g009620 82.759 58 10 0 97 154 110 167 3.44e-28 108
MS.gene26633.t1 MTR_3g090760 62.963 81 29 1 97 177 111 190 7.68e-27 106
MS.gene26633.t1 MTR_1g028560 42.138 159 60 5 46 188 48 190 8.86e-27 105
MS.gene26633.t1 MTR_2g078680 64.103 78 26 1 88 163 18 95 1.15e-26 102
MS.gene26633.t1 MTR_2g014340 70.312 64 19 0 99 162 19 82 1.41e-26 102
MS.gene26633.t1 MTR_4g078710 53.191 94 28 1 99 192 28 105 2.45e-26 102
MS.gene26633.t1 MTR_1g070070 69.014 71 21 1 86 155 8 78 2.62e-26 99.8
MS.gene26633.t1 MTR_3g053690 64.706 68 24 0 98 165 26 93 1.50e-25 100
MS.gene26633.t1 MTR_2g015040 72.581 62 16 1 95 155 59 120 1.92e-25 97.8
MS.gene26633.t1 MTR_2g015050 61.842 76 26 2 89 163 124 197 1.04e-24 99.0
MS.gene26633.t1 MTR_5g085100 67.188 64 21 0 98 161 45 108 1.23e-24 99.0
MS.gene26633.t1 MTR_8g006825 58.750 80 28 2 97 175 94 169 4.61e-24 95.9
MS.gene26633.t1 MTR_8g099215 74.138 58 15 0 97 154 105 162 7.47e-24 97.4
MS.gene26633.t1 MTR_1g048610 41.497 147 74 4 26 163 17 160 7.67e-24 95.9
MS.gene26633.t1 MTR_4g088005 68.852 61 18 1 96 155 54 114 7.96e-24 92.8
MS.gene26633.t1 MTR_4g100420 66.667 69 22 1 89 156 147 215 1.12e-23 97.1
MS.gene26633.t1 MTR_7g081815 59.740 77 30 1 97 172 59 135 1.20e-23 94.7
MS.gene26633.t1 MTR_4g100380 66.197 71 23 1 87 156 133 203 1.54e-23 95.9
MS.gene26633.t1 MTR_4g100450 66.667 69 22 1 89 156 144 212 2.07e-23 96.3
MS.gene26633.t1 MTR_8g006840 70.968 62 16 2 99 158 125 186 2.21e-23 93.6
MS.gene26633.t1 MTR_7g096700 65.753 73 24 1 84 155 5 77 2.38e-23 92.0
MS.gene26633.t1 MTR_5g085070 64.062 64 23 0 98 161 50 113 2.99e-23 95.1
MS.gene26633.t1 MTR_7g081805 58.974 78 30 2 97 172 59 136 3.82e-23 93.2
MS.gene26633.t1 MTR_7g081795 68.333 60 18 1 97 155 58 117 5.22e-23 92.8
MS.gene26633.t1 MTR_3g095190 64.045 89 28 2 87 175 158 242 7.23e-23 95.5
MS.gene26633.t1 MTR_1g090290 59.155 71 28 1 87 156 101 171 8.91e-23 92.0
MS.gene26633.t1 MTR_4g054740 51.485 101 37 4 96 184 94 194 1.11e-22 92.8
MS.gene26633.t1 MTR_3g098580 44.681 141 44 4 15 155 26 132 1.45e-22 93.2
MS.gene26633.t1 MTR_8g090350 66.129 62 21 0 94 155 108 169 1.56e-22 93.6
MS.gene26633.t1 MTR_7g096750 63.158 76 21 2 87 155 2 77 2.14e-22 89.4
MS.gene26633.t1 MTR_1g074310 69.492 59 17 1 98 155 20 78 2.32e-22 89.4
MS.gene26633.t1 MTR_4g008860 61.290 62 24 0 94 155 3 64 2.34e-22 90.9
MS.gene26633.t1 MTR_5g083340 63.077 65 24 0 93 157 79 143 2.58e-22 94.4
MS.gene26633.t1 MTR_2g089170 48.454 97 49 1 99 195 65 160 2.79e-22 90.5
MS.gene26633.t1 MTR_4g010640 67.742 62 20 0 97 158 5 66 2.90e-22 91.3
MS.gene26633.t1 MTR_8g006815 64.062 64 21 2 97 158 94 157 3.25e-22 90.5
MS.gene26633.t1 MTR_4g114570 65.625 64 22 0 97 160 5 68 3.33e-22 90.9
MS.gene26633.t1 MTR_5g082950 67.797 59 19 0 96 154 63 121 4.76e-22 92.8
MS.gene26633.t1 MTR_3g074130 69.492 59 18 0 97 155 148 206 6.41e-22 92.8
MS.gene26633.t1 MTR_2g438180 61.429 70 26 1 87 155 2 71 8.63e-22 87.8
MS.gene26633.t1 MTR_5g075570 54.321 81 36 1 94 173 119 199 9.39e-22 91.3
MS.gene26633.t1 MTR_5g062700 66.129 62 21 0 94 155 168 229 1.01e-21 92.4
MS.gene26633.t1 MTR_1g074230 72.881 59 15 1 98 155 18 76 1.02e-21 87.8
MS.gene26633.t1 MTR_2g014300 70.175 57 17 0 99 155 15 71 1.22e-21 88.6
MS.gene26633.t1 MTR_7g046260 51.852 81 32 1 88 161 43 123 1.57e-21 89.7
MS.gene26633.t1 MTR_7g092190 65.517 58 20 0 98 155 29 86 1.66e-21 90.5
MS.gene26633.t1 MTR_4g082345 37.956 137 67 2 93 211 42 178 1.73e-21 91.3
MS.gene26633.t1 MTR_1g019110 46.154 91 36 1 95 185 40 117 1.78e-21 88.2
MS.gene26633.t1 MTR_1g090170 35.849 159 95 3 9 164 59 213 1.99e-21 90.9
MS.gene26633.t1 MTR_3g102100 52.174 69 33 0 87 155 33 101 2.00e-21 87.8
MS.gene26633.t1 MTR_8g102800 42.424 99 53 1 67 161 1 99 2.02e-21 89.4
MS.gene26633.t1 MTR_4g054360 50.000 100 36 4 99 184 124 223 2.26e-21 90.1
MS.gene26633.t1 MTR_2g019750 40.336 119 62 2 86 197 37 153 2.37e-21 90.5
MS.gene26633.t1 MTR_1g069985 42.742 124 54 5 85 198 60 176 3.18e-21 88.6
MS.gene26633.t1 MTR_2g103700 66.667 60 20 0 97 156 5 64 3.45e-21 87.4
MS.gene26633.t1 MTR_6g088405 60.317 63 25 0 99 161 44 106 3.95e-21 88.2
MS.gene26633.t1 MTR_1g090170 37.086 151 88 3 17 164 154 300 4.15e-21 91.3
MS.gene26633.t1 MTR_1g070015 47.917 96 41 3 96 182 81 176 5.45e-21 87.8
MS.gene26633.t1 MTR_2g101340 44.898 98 36 2 82 161 6 103 6.15e-21 87.4
MS.gene26633.t1 MTR_4g054860 51.020 98 37 4 96 182 128 225 7.69e-21 88.6
MS.gene26633.t1 MTR_2g090235 67.797 59 19 0 97 155 216 274 9.01e-21 90.5
MS.gene26633.t1 MTR_3g106290 61.290 62 24 0 94 155 3 64 9.13e-21 86.7
MS.gene26633.t1 MTR_6g012970 48.913 92 46 1 93 183 32 123 1.69e-20 89.4
MS.gene26633.t1 MTR_2g016730 57.353 68 29 0 89 156 13 80 1.99e-20 88.6
MS.gene26633.t1 MTR_8g069360 54.795 73 33 0 95 167 40 112 2.33e-20 89.4
MS.gene26633.t1 MTR_1g070020 45.631 103 47 3 89 182 60 162 3.15e-20 85.9
MS.gene26633.t1 MTR_7g011630 60.317 63 25 0 92 154 35 97 4.71e-20 88.6
MS.gene26633.t1 MTR_1g070000 48.352 91 38 3 101 182 86 176 5.74e-20 85.1
MS.gene26633.t1 MTR_3g110205 39.200 125 56 3 99 207 43 163 5.81e-20 84.3
MS.gene26633.t1 MTR_5g016750 54.098 61 28 0 95 155 21 81 9.84e-20 83.6
MS.gene26633.t1 MTR_6g033255 67.123 73 24 0 96 168 17 89 1.07e-19 84.3
MS.gene26633.t1 MTR_5g032820 54.545 77 29 1 98 174 45 115 1.18e-19 86.7
MS.gene26633.t1 MTR_1g070035 50.538 93 42 3 96 184 74 166 1.23e-19 84.3
MS.gene26633.t1 MTR_1g070045 45.918 98 44 3 94 182 61 158 1.61e-19 82.8
MS.gene26633.t1 MTR_8g085960 56.164 73 29 1 85 154 8 80 1.99e-19 84.0
MS.gene26633.t1 MTR_4g119270 50.685 73 36 0 86 158 40 112 2.02e-19 85.9
MS.gene26633.t1 MTR_0939s0010 58.333 72 23 1 99 163 65 136 2.04e-19 83.2
MS.gene26633.t1 MTR_7g096810 68.750 64 19 1 93 155 7 70 2.15e-19 81.3
MS.gene26633.t1 MTR_4g100650 61.404 57 22 0 99 155 74 130 2.57e-19 84.3
MS.gene26633.t1 MTR_1g074250 68.333 60 17 1 98 155 18 77 2.83e-19 80.9
MS.gene26633.t1 MTR_5g012910 50.633 79 36 1 86 161 12 90 3.30e-19 82.4
MS.gene26633.t1 MTR_8g013860 57.143 63 27 0 99 161 47 109 3.54e-19 82.8
MS.gene26633.t1 MTR_8g006410 48.193 83 36 1 86 161 32 114 3.92e-19 82.8
MS.gene26633.t1 MTR_1g069960 74.576 59 14 1 98 155 26 84 4.04e-19 81.3
MS.gene26633.t1 MTR_8g023680 64.151 53 19 0 93 145 110 162 4.72e-19 85.1
MS.gene26633.t1 MTR_5g083330 59.091 66 27 0 90 155 26 91 6.48e-19 84.0
MS.gene26633.t1 MTR_4g111915 56.716 67 29 0 93 159 47 113 9.16e-19 80.1
MS.gene26633.t1 MTR_1g069940 65.753 73 22 2 96 165 92 164 9.35e-19 82.4
MS.gene26633.t1 MTR_1g014820 57.627 59 25 0 97 155 25 83 1.12e-18 82.8
MS.gene26633.t1 MTR_1g014860 57.627 59 25 0 97 155 20 78 1.22e-18 81.6
MS.gene26633.t1 MTR_4g112490 54.930 71 32 0 89 159 43 113 1.34e-18 81.3
MS.gene26633.t1 MTR_7g084370 66.667 57 19 0 98 154 41 97 1.68e-18 82.4
MS.gene26633.t1 MTR_8g032610 54.412 68 31 0 90 157 18 85 1.71e-18 82.8
MS.gene26633.t1 MTR_1g014800 53.968 63 29 0 93 155 25 87 1.71e-18 81.3
MS.gene26633.t1 MTR_6g029180 54.054 74 32 1 81 154 17 88 1.80e-18 82.8
MS.gene26633.t1 MTR_1g014780 57.627 59 25 0 97 155 36 94 3.27e-18 80.9
MS.gene26633.t1 MTR_7g117690 56.140 57 25 0 99 155 28 84 3.64e-18 79.3
MS.gene26633.t1 MTR_7g085810 61.404 57 22 0 98 154 29 85 3.99e-18 80.9
MS.gene26633.t1 MTR_7g070220 60.317 63 18 1 99 154 78 140 4.54e-18 82.8
MS.gene26633.t1 MTR_1g069945 65.753 73 22 2 96 165 98 170 4.54e-18 80.5
MS.gene26633.t1 MTR_7g096780 65.333 75 23 2 93 164 79 153 1.43e-17 79.0
MS.gene26633.t1 MTR_8g027465 51.429 70 32 1 99 168 39 106 4.68e-17 76.3
MS.gene26633.t1 MTR_4g035430 47.761 67 35 0 89 155 22 88 7.32e-17 77.0
MS.gene26633.t1 MTR_1g043350 56.962 79 31 2 89 164 72 150 1.21e-16 76.3
MS.gene26633.t1 MTR_1g074370 46.667 120 43 5 94 202 68 177 1.44e-16 75.9
MS.gene26633.t1 MTR_1g040430 65.385 52 17 1 106 156 118 169 2.14e-16 75.1
MS.gene26633.t1 MTR_7g096830 44.882 127 42 5 89 190 91 214 2.28e-16 75.9
MS.gene26633.t1 MTR_1g110970 54.386 57 26 0 90 146 88 144 2.42e-16 77.0
MS.gene26633.t1 MTR_1g097190 49.296 71 33 1 90 157 14 84 2.61e-16 73.6
MS.gene26633.t1 MTR_1g101600 49.367 79 32 1 84 154 18 96 3.03e-16 74.7
MS.gene26633.t1 MTR_1g006660 55.556 81 31 1 86 161 29 109 3.46e-16 75.9
MS.gene26633.t1 MTR_3g017420 62.000 50 19 0 106 155 2 51 3.51e-16 71.2
MS.gene26633.t1 MTR_3g105510 50.820 61 30 0 94 154 32 92 3.95e-16 75.5
MS.gene26633.t1 MTR_1g105400 53.571 56 26 0 90 145 106 161 5.27e-16 76.3
MS.gene26633.t1 MTR_2g043050 56.140 57 25 0 99 155 19 75 5.53e-16 74.3
MS.gene26633.t1 MTR_6g465530 60.714 56 22 0 99 154 33 88 1.18e-15 73.2
MS.gene26633.t1 MTR_6g465690 43.137 102 42 3 69 154 17 118 1.31e-15 74.3
MS.gene26633.t1 MTR_8g023700 55.556 54 24 0 92 145 110 163 1.78e-15 74.7
MS.gene26633.t1 MTR_2g043030 54.386 57 26 0 99 155 19 75 1.88e-15 72.8
MS.gene26633.t1 MTR_6g466130 51.389 72 29 1 89 154 50 121 2.98e-15 72.8
MS.gene26633.t1 MTR_6g465510 58.929 56 23 0 99 154 33 88 3.17e-15 72.0
MS.gene26633.t1 MTR_3g112440 62.500 64 24 0 99 162 39 102 5.33e-15 72.0
MS.gene26633.t1 MTR_1g012470 63.934 61 22 0 96 156 4 64 6.10e-15 71.2
MS.gene26633.t1 MTR_2g043040 45.205 73 31 1 99 171 19 82 6.69e-15 71.6
MS.gene26633.t1 MTR_6g088425 47.253 91 34 1 85 161 21 111 6.71e-15 71.6
MS.gene26633.t1 MTR_6g465430 52.778 72 25 1 92 154 38 109 7.11e-15 72.0
MS.gene26633.t1 MTR_6g037610 82.000 50 9 0 106 155 187 236 1.00e-14 72.8
MS.gene26633.t1 MTR_6g466000 51.389 72 29 1 89 154 41 112 1.10e-14 70.9
MS.gene26633.t1 MTR_1g098460 82.000 50 9 0 106 155 146 195 1.22e-14 72.4
MS.gene26633.t1 MTR_6g465460 51.389 72 26 1 92 154 38 109 1.23e-14 71.6
MS.gene26633.t1 MTR_5g008540 50.000 62 31 0 101 162 26 87 1.38e-14 67.8
MS.gene26633.t1 MTR_6g465850 57.143 56 24 0 99 154 63 118 1.38e-14 71.6
MS.gene26633.t1 MTR_6g465450 50.000 72 27 1 92 154 38 109 1.44e-14 70.9
MS.gene26633.t1 MTR_5g008590 58.730 63 26 0 99 161 11 73 1.47e-14 70.1
MS.gene26633.t1 MTR_1g023170 51.899 79 31 1 77 155 25 96 1.49e-14 71.2
MS.gene26633.t1 MTR_6g466020 48.611 72 31 1 89 154 27 98 1.62e-14 69.7
MS.gene26633.t1 MTR_7g028925 54.237 59 24 1 97 155 27 82 2.31e-14 67.0
MS.gene26633.t1 MTR_3g107380 66.667 60 20 0 97 156 6 65 3.09e-14 69.3
MS.gene26633.t1 MTR_2g043020 38.824 85 43 1 87 171 7 82 3.75e-14 69.3
MS.gene26633.t1 MTR_5g085125 39.216 102 62 0 98 199 15 116 3.90e-14 68.6
MS.gene26633.t1 MTR_4g102670 56.140 57 24 1 99 155 15 70 6.14e-14 67.8
MS.gene26633.t1 MTR_6g465420 57.143 56 24 0 99 154 54 109 1.31e-13 68.6
MS.gene26633.t1 MTR_5g008790 52.459 61 27 1 97 155 16 76 2.24e-13 66.2
MS.gene26633.t1 MTR_5g009410 68.333 60 19 0 96 155 114 173 3.33e-13 68.2
MS.gene26633.t1 MTR_3g105480 51.852 54 26 0 101 154 33 86 7.97e-13 65.9
MS.gene26633.t1 MTR_3g072610 48.235 85 35 2 85 160 4 88 1.32e-12 65.1
MS.gene26633.t1 MTR_5g057810 50.000 68 33 1 98 164 87 154 1.57e-12 65.9
MS.gene26633.t1 MTR_5g057647 50.000 68 33 1 98 164 87 154 1.57e-12 65.9
MS.gene26633.t1 MTR_5g008470 47.826 69 31 1 98 161 69 137 2.01e-12 63.9
MS.gene26633.t1 MTR_5g058470 58.065 62 25 1 96 156 93 154 5.70e-12 64.3
MS.gene26633.t1 MTR_3g062440 50.685 73 35 1 99 170 115 187 6.11e-12 63.9
MS.gene26633.t1 MTR_5g053920 49.275 69 32 2 98 165 65 131 7.14e-12 64.3
MS.gene26633.t1 MTR_1g093600 35.455 110 66 2 47 153 9 116 3.43e-11 62.4
MS.gene26633.t1 MTR_5g010910 43.750 80 30 2 90 154 31 110 3.62e-11 61.2
MS.gene26633.t1 MTR_5g010940 50.000 62 25 1 99 154 54 115 3.76e-11 61.2
MS.gene26633.t1 MTR_1g101550 58.621 58 23 1 98 155 56 112 4.34e-11 61.2
MS.gene26633.t1 MTR_2g085015 49.153 59 28 2 99 155 47 105 4.43e-11 61.2
MS.gene26633.t1 MTR_5g015070 35.385 130 74 4 94 221 350 471 6.18e-11 62.0
MS.gene26633.t1 MTR_4g009260 63.934 61 22 0 96 156 74 134 8.42e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26633.t1 AT4G34410 46.774 186 55 4 8 158 19 195 3.29e-37 131
MS.gene26633.t1 AT5G67000 43.448 145 65 2 9 153 48 175 3.01e-32 116
MS.gene26633.t1 AT2G47520 73.239 71 18 1 85 155 37 106 2.54e-30 110
MS.gene26633.t1 AT2G33710 73.134 67 18 0 89 155 60 126 8.18e-30 111
MS.gene26633.t1 AT2G33710 73.134 67 18 0 89 155 60 126 1.01e-29 111
MS.gene26633.t1 AT4G11140 81.356 59 11 0 97 155 85 143 2.07e-29 111
MS.gene26633.t1 AT5G13330 76.667 60 14 0 96 155 36 95 3.45e-29 109
MS.gene26633.t1 AT3G16770 43.506 154 66 5 91 225 71 222 4.37e-29 110
MS.gene26633.t1 AT5G61890 75.000 60 15 0 96 155 87 146 1.30e-28 108
MS.gene26633.t1 AT4G27950 59.770 87 27 1 96 182 115 193 2.13e-27 107
MS.gene26633.t1 AT4G23750 58.621 87 17 1 87 154 91 177 2.59e-27 107
MS.gene26633.t1 AT4G23750 58.621 87 17 1 87 154 91 177 2.59e-27 107
MS.gene26633.t1 AT1G72360 67.188 64 21 0 92 155 18 81 1.67e-26 102
MS.gene26633.t1 AT1G03800 62.857 70 26 0 88 157 42 111 2.52e-26 102
MS.gene26633.t1 AT1G72360 67.188 64 21 0 92 155 69 132 2.84e-26 102
MS.gene26633.t1 AT1G72360 67.188 64 21 0 92 155 67 130 2.94e-26 102
MS.gene26633.t1 AT5G44210 70.149 67 20 0 94 160 28 94 3.13e-26 101
MS.gene26633.t1 AT3G15210 54.255 94 26 2 98 174 24 117 3.98e-26 101
MS.gene26633.t1 AT1G28370 74.138 58 15 0 98 155 57 114 3.57e-25 98.6
MS.gene26633.t1 AT5G53290 73.333 60 16 0 97 156 123 182 4.54e-25 101
MS.gene26633.t1 AT1G28370 74.138 58 15 0 98 155 19 76 6.54e-25 97.1
MS.gene26633.t1 AT5G47230 54.737 95 42 1 63 156 120 214 9.97e-25 99.8
MS.gene26633.t1 AT5G51190 66.667 66 21 1 92 156 65 130 1.21e-24 97.8
MS.gene26633.t1 AT3G61630 74.138 58 15 0 97 154 103 160 3.85e-24 98.2
MS.gene26633.t1 AT5G47220 73.770 61 15 1 97 156 115 175 1.64e-23 95.1
MS.gene26633.t1 AT2G20350 43.478 138 59 2 13 150 20 138 1.87e-23 92.8
MS.gene26633.t1 AT2G22200 62.319 69 25 1 94 161 66 134 2.32e-23 95.1
MS.gene26633.t1 AT4G17500 73.770 61 15 1 97 156 146 206 2.37e-23 95.1
MS.gene26633.t1 AT1G50640 69.492 59 18 0 98 156 27 85 2.55e-23 94.4
MS.gene26633.t1 AT4G39780 66.154 65 22 0 91 155 85 149 3.10e-23 95.1
MS.gene26633.t1 AT4G17490 72.581 62 16 1 96 156 134 195 4.04e-23 95.1
MS.gene26633.t1 AT5G07310 78.333 60 13 0 96 155 89 148 5.35e-23 94.4
MS.gene26633.t1 AT1G78080 41.135 141 75 1 15 155 76 208 6.16e-23 95.5
MS.gene26633.t1 AT1G22190 67.742 62 20 0 94 155 78 139 6.35e-23 94.0
MS.gene26633.t1 AT5G43410 74.576 59 14 1 98 155 14 72 6.36e-23 90.5
MS.gene26633.t1 AT5G50080 73.611 72 15 1 84 155 75 142 6.95e-23 93.2
MS.gene26633.t1 AT1G36060 65.625 64 22 0 94 157 138 201 7.14e-23 94.7
MS.gene26633.t1 AT1G22985 67.606 71 18 2 96 161 72 142 7.44e-23 91.3
MS.gene26633.t1 AT5G50080 73.611 72 15 1 84 155 66 133 7.64e-23 92.8
MS.gene26633.t1 AT3G20310 67.797 59 19 0 98 156 26 84 8.44e-23 93.2
MS.gene26633.t1 AT4G13620 65.672 67 23 0 97 163 230 296 8.50e-23 95.9
MS.gene26633.t1 AT2G31230 59.524 84 31 2 85 165 72 155 9.09e-23 93.2
MS.gene26633.t1 AT1G43160 50.746 134 49 5 22 155 1 117 9.95e-23 92.0
MS.gene26633.t1 AT2G20880 61.842 76 26 1 95 170 183 255 1.41e-22 94.4
MS.gene26633.t1 AT1G15360 68.333 60 19 0 97 156 5 64 1.57e-22 91.7
MS.gene26633.t1 AT1G15360 68.333 60 19 0 97 156 5 64 1.57e-22 91.7
MS.gene26633.t1 AT3G23240 46.218 119 45 5 93 202 76 184 2.11e-22 91.7
MS.gene26633.t1 AT2G44840 53.409 88 31 2 85 162 69 156 2.29e-22 91.7
MS.gene26633.t1 AT5G61600 65.574 61 20 1 97 156 86 146 2.33e-22 92.0
MS.gene26633.t1 AT5G65130 38.889 144 67 2 97 223 109 248 3.46e-22 92.4
MS.gene26633.t1 AT5G65130 38.889 144 67 2 97 223 111 250 3.76e-22 92.4
MS.gene26633.t1 AT4G28140 68.852 61 19 0 95 155 139 199 4.22e-22 92.4
MS.gene26633.t1 AT3G23230 71.186 59 16 1 98 155 19 77 6.22e-22 88.2
MS.gene26633.t1 AT1G71130 63.380 71 21 1 91 156 71 141 7.13e-22 89.0
MS.gene26633.t1 AT5G25190 61.290 62 24 0 94 155 3 64 1.17e-21 88.6
MS.gene26633.t1 AT4G32800 54.930 71 32 0 85 155 5 75 1.41e-21 89.7
MS.gene26633.t1 AT5G05410 66.129 62 21 0 99 160 79 140 1.42e-21 91.3
MS.gene26633.t1 AT1G28360 68.966 58 18 0 98 155 11 68 1.62e-21 88.6
MS.gene26633.t1 AT2G23340 57.812 64 27 0 92 155 21 84 1.95e-21 88.2
MS.gene26633.t1 AT5G05410 66.129 62 21 0 99 160 79 140 2.22e-21 91.3
MS.gene26633.t1 AT5G25390 63.934 61 22 0 97 157 5 65 2.72e-21 88.2
MS.gene26633.t1 AT2G46310 61.765 68 26 0 87 154 87 154 2.78e-21 90.1
MS.gene26633.t1 AT4G06746 59.322 59 24 0 97 155 34 92 3.10e-21 86.7
MS.gene26633.t1 AT1G75490 61.538 65 22 1 99 163 42 103 3.86e-21 88.2
MS.gene26633.t1 AT5G64750 78.000 50 11 0 106 155 192 241 4.71e-21 90.9
MS.gene26633.t1 AT5G11590 51.220 82 35 1 85 161 32 113 4.74e-21 88.6
MS.gene26633.t1 AT4G36900 55.556 63 28 0 93 155 24 86 5.53e-21 87.4
MS.gene26633.t1 AT5G13910 55.405 74 33 0 85 158 6 79 6.51e-21 87.4
MS.gene26633.t1 AT1G46768 60.000 60 24 0 96 155 28 87 9.53e-21 85.1
MS.gene26633.t1 AT1G46768 60.000 60 24 0 96 155 28 87 9.69e-21 85.5
MS.gene26633.t1 AT1G46768 60.000 60 24 0 96 155 28 87 9.69e-21 85.5
MS.gene26633.t1 AT5G07580 63.934 61 21 1 97 156 108 168 9.99e-21 87.0
MS.gene26633.t1 AT3G57600 63.793 58 21 0 98 155 27 84 1.29e-20 88.2
MS.gene26633.t1 AT4G18450 69.355 62 17 2 97 156 108 169 2.25e-20 87.8
MS.gene26633.t1 AT5G25810 56.944 72 29 1 86 155 21 92 2.85e-20 85.9
MS.gene26633.t1 AT1G71450 51.948 77 37 0 85 161 10 86 3.03e-20 85.1
MS.gene26633.t1 AT5G19790 57.971 69 29 0 86 154 9 77 3.58e-20 86.7
MS.gene26633.t1 AT3G16280 63.158 57 21 0 99 155 61 117 3.89e-20 85.9
MS.gene26633.t1 AT3G16280 63.158 57 21 0 99 155 79 135 4.16e-20 86.3
MS.gene26633.t1 AT1G74930 34.104 173 80 5 86 233 8 171 4.25e-20 85.1
MS.gene26633.t1 AT5G67190 37.719 114 66 1 93 201 15 128 4.62e-20 84.7
MS.gene26633.t1 AT4G16750 54.795 73 31 1 85 155 24 96 5.20e-20 84.3
MS.gene26633.t1 AT2G25820 63.158 57 21 0 99 155 26 82 7.17e-20 85.1
MS.gene26633.t1 AT1G21910 57.895 57 24 0 99 155 50 106 8.13e-20 85.1
MS.gene26633.t1 AT5G67010 38.211 123 53 3 13 132 21 123 9.20e-20 83.2
MS.gene26633.t1 AT2G35700 61.404 57 22 0 99 155 45 101 1.01e-19 84.0
MS.gene26633.t1 AT5G25390 62.295 61 20 1 97 157 5 62 1.10e-19 83.6
MS.gene26633.t1 AT2G44940 63.158 57 21 0 99 155 100 156 1.13e-19 85.9
MS.gene26633.t1 AT1G12980 66.667 57 19 0 98 154 56 112 1.23e-19 86.3
MS.gene26633.t1 AT3G50260 55.385 65 28 1 91 155 14 77 1.36e-19 82.4
MS.gene26633.t1 AT3G11020 64.912 57 20 0 99 155 78 134 2.07e-19 85.5
MS.gene26633.t1 AT3G60490 61.404 57 22 0 99 155 71 127 5.66e-19 83.2
MS.gene26633.t1 AT5G18560 54.286 70 31 1 86 154 41 110 6.97e-19 84.3
MS.gene26633.t1 AT5G18450 64.286 56 20 0 99 154 34 89 1.21e-18 83.2
MS.gene26633.t1 AT5G21960 51.316 76 28 1 95 170 3 69 1.34e-18 81.6
MS.gene26633.t1 AT1G24590 66.667 57 19 0 98 154 57 113 1.34e-18 83.2
MS.gene26633.t1 AT1G12890 59.155 71 25 1 88 154 6 76 1.65e-18 81.3
MS.gene26633.t1 AT2G40340 59.322 59 24 0 99 157 14 72 1.88e-18 82.4
MS.gene26633.t1 AT2G40340 59.322 59 24 0 99 157 14 72 1.88e-18 82.4
MS.gene26633.t1 AT2G40340 59.322 59 24 0 99 157 14 72 1.88e-18 82.4
MS.gene26633.t1 AT1G28160 48.980 98 42 2 98 191 38 131 2.05e-18 81.6
MS.gene26633.t1 AT1G06160 54.444 90 31 3 97 176 80 169 2.95e-18 81.3
MS.gene26633.t1 AT1G01250 50.725 69 31 1 99 167 45 110 3.20e-18 80.1
MS.gene26633.t1 AT2G40350 57.627 59 25 0 99 157 74 132 5.90e-18 78.6
MS.gene26633.t1 AT1G53910 64.865 74 24 1 89 162 115 186 6.23e-18 82.0
MS.gene26633.t1 AT1G53910 64.865 74 24 1 89 162 115 186 6.23e-18 82.0
MS.gene26633.t1 AT1G53910 64.865 74 24 1 89 162 113 184 6.45e-18 81.6
MS.gene26633.t1 AT2G40340 59.322 59 24 0 99 157 79 137 7.03e-18 81.6
MS.gene26633.t1 AT2G40350 57.627 59 25 0 99 157 67 125 7.10e-18 78.2
MS.gene26633.t1 AT2G40340 59.322 59 24 0 99 157 72 130 8.01e-18 81.3
MS.gene26633.t1 AT2G40340 59.322 59 24 0 99 157 72 130 8.75e-18 80.9
MS.gene26633.t1 AT3G14230 68.056 72 22 1 85 155 109 180 9.31e-18 81.6
MS.gene26633.t1 AT3G14230 68.056 72 22 1 85 155 108 179 9.34e-18 81.6
MS.gene26633.t1 AT3G14230 68.056 72 22 1 85 155 113 184 1.02e-17 81.3
MS.gene26633.t1 AT4G25470 57.576 66 28 0 89 154 41 106 1.89e-17 78.6
MS.gene26633.t1 AT4G25490 56.061 66 29 0 89 154 38 103 3.88e-17 77.4
MS.gene26633.t1 AT1G68550 68.000 50 16 0 96 145 110 159 3.91e-17 79.3
MS.gene26633.t1 AT1G68550 68.000 50 16 0 96 145 110 159 3.91e-17 79.3
MS.gene26633.t1 AT1G19210 55.000 60 27 0 96 155 9 68 5.11e-17 76.6
MS.gene26633.t1 AT3G23220 67.164 67 21 1 98 163 13 79 5.64e-17 75.1
MS.gene26633.t1 AT4G31060 51.562 64 31 0 92 155 20 83 5.66e-17 76.6
MS.gene26633.t1 AT1G77200 58.824 68 28 0 88 155 32 99 8.83e-17 77.0
MS.gene26633.t1 AT2G36450 60.345 58 22 1 99 155 15 72 1.27e-16 75.5
MS.gene26633.t1 AT4G25480 54.545 66 30 0 89 154 41 106 1.40e-16 75.9
MS.gene26633.t1 AT5G51990 52.778 72 25 1 92 154 38 109 8.14e-16 74.3
MS.gene26633.t1 AT1G53170 61.111 72 24 1 86 157 22 89 1.23e-15 72.8
MS.gene26633.t1 AT1G04370 72.881 59 15 1 98 155 19 77 1.62e-15 71.2
MS.gene26633.t1 AT2G40220 60.294 68 27 0 87 154 43 110 1.67e-15 74.7
MS.gene26633.t1 AT5G61590 61.111 72 25 2 88 156 94 165 3.60e-15 72.0
MS.gene26633.t1 AT5G11190 55.263 76 29 1 97 167 5 80 1.06e-14 70.5
MS.gene26633.t1 AT1G64380 56.410 78 27 1 94 171 131 201 1.73e-14 72.0
MS.gene26633.t1 AT1G77640 50.649 77 35 1 93 166 37 113 2.38e-14 70.5
MS.gene26633.t1 AT1G22810 44.304 79 41 2 95 170 10 88 2.57e-14 68.2
MS.gene26633.t1 AT2G38340 59.091 66 19 1 98 155 69 134 5.86e-14 69.3
MS.gene26633.t1 AT1G63030 47.297 74 30 1 90 154 12 85 1.77e-13 67.0
MS.gene26633.t1 AT1G63030 47.297 74 30 1 90 154 12 85 1.77e-13 67.0
MS.gene26633.t1 AT3G25890 64.444 45 16 0 101 145 133 177 2.74e-13 68.6
MS.gene26633.t1 AT3G25890 64.444 45 16 0 101 145 133 177 2.74e-13 68.6
MS.gene26633.t1 AT1G71520 42.500 80 41 2 96 170 11 90 5.58e-13 64.7
MS.gene26633.t1 AT1G12610 43.243 74 33 1 90 154 12 85 1.21e-12 65.1
MS.gene26633.t1 AT1G49120 61.702 47 18 0 99 145 87 133 1.71e-12 66.2
MS.gene26633.t1 AT1G33760 59.016 61 24 1 99 158 20 80 2.18e-12 63.9
MS.gene26633.t1 AT1G68840 35.556 135 62 5 98 232 64 173 2.88e-12 65.5
MS.gene26633.t1 AT1G68840 35.556 135 62 5 98 232 64 173 2.88e-12 65.5
MS.gene26633.t1 AT1G44830 52.941 68 31 1 97 163 33 100 1.92e-11 62.0
MS.gene26633.t1 AT1G80580 38.621 145 71 4 40 166 42 186 5.77e-11 61.2

Find 77 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACAATTTATGAGGTTTA+TGG 0.148041 4.1:-23596409 MS.gene26633:CDS
CTGGAGATTCTTCTGGTTCT+AGG 0.189683 4.1:-23596380 MS.gene26633:CDS
ATTGAAACAACGACGGGGTT+TGG 0.291623 4.1:-23596480 MS.gene26633:CDS
CTGCTTCCGATGGTGGAATC+CGG 0.331036 4.1:+23596906 None:intergenic
TTGAAACAACGACGGGGTTT+GGG 0.339444 4.1:-23596479 MS.gene26633:CDS
GACGGGGTTTGGGAATAATA+AGG 0.342374 4.1:-23596469 MS.gene26633:CDS
CGAGACGTGCGGTCCGTGTT+TGG 0.360884 4.1:-23596692 MS.gene26633:CDS
GTGGTTCCTCAACATTCTTA+AGG 0.365826 4.1:+23596562 None:intergenic
GGAATCCGGGAGATGAAATT+CGG 0.367751 4.1:+23596920 None:intergenic
TGGTTCCTCAACATTCTTAA+GGG 0.370196 4.1:+23596563 None:intergenic
TGCAACATAGCAGGATGTTT+AGG 0.384768 4.1:-23596825 MS.gene26633:CDS
CCGCAGGTTTCCATGTTTGT+TGG 0.386204 4.1:+23596852 None:intergenic
AGGCGGAGACTACGTTGGTT+AGG 0.389583 4.1:+23596967 None:intergenic
AGCTTCCTCCGCCGTGGTAA+AGG 0.419719 4.1:+23596662 None:intergenic
TGAGAAGGAACAACCACTTC+TGG 0.432213 4.1:+23596540 None:intergenic
GGCGGAGACTACGTTGGTTA+GGG 0.437512 4.1:+23596968 None:intergenic
GGTAGATGAGAAGGAGGAAG+AGG 0.439044 4.1:+23597031 None:intergenic
GCTGCTGCTGCTTCCGATGG+TGG 0.447949 4.1:+23596899 None:intergenic
CAGGTTTCCATGTTTGTTGG+TGG 0.450418 4.1:+23596855 None:intergenic
GGGTAATGAATTTGCGGTTG+AGG 0.456997 4.1:+23596941 None:intergenic
TGAATTTGCGGTTGAGGTGG+AGG 0.461589 4.1:+23596947 None:intergenic
GATTCTTCTGGTTCTAGGAC+AGG 0.461736 4.1:-23596375 MS.gene26633:CDS
CCATCGAGTTCCGTGGGCCG+AGG 0.463560 4.1:-23596617 MS.gene26633:CDS
GGTGAGAGTGGTAGATGAGA+AGG 0.470589 4.1:+23597022 None:intergenic
ATTACCCGAATTTCATCTCC+CGG 0.478489 4.1:-23596925 MS.gene26633:CDS
GAGAGTGGTAGATGAGAAGG+AGG 0.480674 4.1:+23597025 None:intergenic
GAATCCGGGAGATGAAATTC+GGG 0.490345 4.1:+23596921 None:intergenic
TGCTTCCGATGGTGGAATCC+GGG 0.490588 4.1:+23596907 None:intergenic
GGCGGCATTGTCATAAGCTC+TGG 0.501230 4.1:+23596638 None:intergenic
AAATTCGGGTAATGAATTTG+CGG 0.501466 4.1:+23596935 None:intergenic
AAACACGGACCGCACGTCTC+GGG 0.502410 4.1:+23596694 None:intergenic
CATCTCCCGGATTCCACCAT+CGG 0.506770 4.1:-23596912 MS.gene26633:CDS
GAGGAGTGAGGCAGAGACCA+TGG 0.509182 4.1:-23596743 MS.gene26633:CDS
TGCGGTGAATGCAACATAGC+AGG 0.510509 4.1:-23596834 MS.gene26633:CDS
TGCTATGTTGCATTCACCGC+AGG 0.510695 4.1:+23596836 None:intergenic
CGTGCGGTCCGTGTTTGGCT+CGG 0.511971 4.1:-23596687 MS.gene26633:CDS
AGGAGTGAGGCAGAGACCAT+GGG 0.517170 4.1:-23596742 MS.gene26633:CDS
TGTTCCTTCTCAGCATGTAA+AGG 0.519086 4.1:-23596529 MS.gene26633:CDS
CAAACACGGACCGCACGTCT+CGG 0.535999 4.1:+23596693 None:intergenic
AACAAGTGGAAAATTGAGCT+TGG 0.538551 4.1:+23596593 None:intergenic
AATGCCGCCATCGAGTTCCG+TGG 0.540528 4.1:-23596624 MS.gene26633:CDS
TGAGCTTGGCCCTCGGCCCA+CGG 0.547368 4.1:+23596607 None:intergenic
TCCTCCTTTACATGCTGAGA+AGG 0.552754 4.1:+23596525 None:intergenic
ATGCAAATTGAAACAACGAC+GGG 0.553453 4.1:-23596486 MS.gene26633:CDS
CAGCAGCAGCATAGAACGAA+TGG 0.557723 4.1:-23596880 MS.gene26633:CDS
AATGACGGATTGTTCTTGAT+CGG 0.558070 4.1:+23596998 None:intergenic
AATGGTTCCACCAACAAACA+TGG 0.558564 4.1:-23596862 MS.gene26633:CDS
GGAAAATTGAGCTTGGCCCT+CGG 0.559126 4.1:+23596600 None:intergenic
CATCGAGTTCCGTGGGCCGA+GGG 0.559501 4.1:-23596616 MS.gene26633:CDS
TAATGAATTTGCGGTTGAGG+TGG 0.566894 4.1:+23596944 None:intergenic
ATTTGCGGTTGAGGTGGAGG+CGG 0.574905 4.1:+23596950 None:intergenic
TTCTTGATCGGAGGTGAGAG+TGG 0.585977 4.1:+23597010 None:intergenic
CCTCGGCCCACGGAACTCGA+TGG 0.586210 4.1:+23596617 None:intergenic
CGGAACCTTTACCACGGCGG+AGG 0.586411 4.1:-23596667 MS.gene26633:CDS
TGTTGAGGAACCACCAGAAG+TGG 0.587679 4.1:-23596553 MS.gene26633:CDS
ATGCCGCCATCGAGTTCCGT+GGG 0.592164 4.1:-23596623 MS.gene26633:CDS
GACGGATTGTTCTTGATCGG+AGG 0.593092 4.1:+23597001 None:intergenic
GGTTAGGGCGGTGACAATGA+CGG 0.595527 4.1:+23596983 None:intergenic
TTAAGGGATTCATCAACAAG+TGG 0.600065 4.1:+23596579 None:intergenic
TGAATCCCTTAAGAATGTTG+AGG 0.607468 4.1:-23596568 MS.gene26633:CDS
ATTCTTCTGGTTCTAGGACA+GGG 0.611454 4.1:-23596374 MS.gene26633:CDS
TCCTTCTCAGCATGTAAAGG+AGG 0.623355 4.1:-23596526 MS.gene26633:CDS
GGAGTGAGGCAGAGACCATG+GGG 0.630795 4.1:-23596741 MS.gene26633:CDS
TCTGGCAGCTTCCTCCGCCG+TGG 0.634042 4.1:+23596656 None:intergenic
CGGCCCACGGAACTCGATGG+CGG 0.636787 4.1:+23596620 None:intergenic
TAAAGGTTCCGAGCCAAACA+CGG 0.637276 4.1:+23596679 None:intergenic
GAAGGAACAACCACTTCTGG+TGG 0.647287 4.1:+23596543 None:intergenic
GGAGACTACGTTGGTTAGGG+CGG 0.662337 4.1:+23596971 None:intergenic
GATTCGTGACCCGAGACGTG+CGG 0.666469 4.1:-23596703 MS.gene26633:CDS
AAAAGAAGTATAGAGGAGTG+AGG 0.676652 4.1:-23596755 MS.gene26633:CDS
TTGGCTCGGAACCTTTACCA+CGG 0.679817 4.1:-23596673 MS.gene26633:CDS
GATGCAAATTGAAACAACGA+CGG 0.695103 4.1:-23596487 MS.gene26633:CDS
GGTGGAGGCGGAGACTACGT+TGG 0.702584 4.1:+23596962 None:intergenic
CCAACAAACATGGAAACCTG+CGG 0.705953 4.1:-23596852 MS.gene26633:CDS
GAGTGAGGCAGAGACCATGG+GGG 0.735515 4.1:-23596740 MS.gene26633:CDS
GCTCGGAACCTTTACCACGG+CGG 0.739922 4.1:-23596670 MS.gene26633:CDS
TGCAAATTGAAACAACGACG+GGG 0.740336 4.1:-23596485 MS.gene26633:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATAAGGATTGTGATTTTT+TGG - chr4.1:23596946-23596965 MS.gene26633:CDS 20.0%
! TCAACAATTTATGAGGTTTA+TGG - chr4.1:23596991-23597010 MS.gene26633:CDS 25.0%
!! CTGATTTTCAACAATTTATG+AGG - chr4.1:23596984-23597003 MS.gene26633:CDS 25.0%
!!! TGATTTTTTGGATAGTATTG+AGG - chr4.1:23596958-23596977 MS.gene26633:CDS 25.0%
AAATTCGGGTAATGAATTTG+CGG + chr4.1:23596468-23596487 None:intergenic 30.0%
! AGAGCTAAAAAGAAGTATAG+AGG - chr4.1:23596638-23596657 MS.gene26633:CDS 30.0%
! ATGAGGTTTATGGAATTTTC+TGG - chr4.1:23597001-23597020 MS.gene26633:CDS 30.0%
AACAAGTGGAAAATTGAGCT+TGG + chr4.1:23596810-23596829 None:intergenic 35.0%
ATGCAAATTGAAACAACGAC+GGG - chr4.1:23596914-23596933 MS.gene26633:CDS 35.0%
GATGCAAATTGAAACAACGA+CGG - chr4.1:23596913-23596932 MS.gene26633:CDS 35.0%
TGAATCCCTTAAGAATGTTG+AGG - chr4.1:23596832-23596851 MS.gene26633:CDS 35.0%
TGGTTCCTCAACATTCTTAA+GGG + chr4.1:23596840-23596859 None:intergenic 35.0%
TTAAGGGATTCATCAACAAG+TGG + chr4.1:23596824-23596843 None:intergenic 35.0%
! AAAAGAAGTATAGAGGAGTG+AGG - chr4.1:23596645-23596664 MS.gene26633:CDS 35.0%
!! AATGACGGATTGTTCTTGAT+CGG + chr4.1:23596405-23596424 None:intergenic 35.0%
!! GAATTTTCTGGAGATTCTTC+TGG - chr4.1:23597013-23597032 MS.gene26633:CDS 35.0%
AATGGTTCCACCAACAAACA+TGG - chr4.1:23596538-23596557 MS.gene26633:CDS 40.0%
ATTACCCGAATTTCATCTCC+CGG - chr4.1:23596475-23596494 MS.gene26633:CDS 40.0%
GTGGTTCCTCAACATTCTTA+AGG + chr4.1:23596841-23596860 None:intergenic 40.0%
TAATGAATTTGCGGTTGAGG+TGG + chr4.1:23596459-23596478 None:intergenic 40.0%
TGCAAATTGAAACAACGACG+GGG - chr4.1:23596915-23596934 MS.gene26633:CDS 40.0%
TGCAACATAGCAGGATGTTT+AGG - chr4.1:23596575-23596594 MS.gene26633:CDS 40.0%
TGTTCCTTCTCAGCATGTAA+AGG - chr4.1:23596871-23596890 MS.gene26633:CDS 40.0%
!! ATTCTTCTGGTTCTAGGACA+GGG - chr4.1:23597026-23597045 MS.gene26633:CDS 40.0%
ATTGAAACAACGACGGGGTT+TGG - chr4.1:23596920-23596939 MS.gene26633:CDS 45.0%
CCAACAAACATGGAAACCTG+CGG - chr4.1:23596548-23596567 MS.gene26633:CDS 45.0%
GAATCCGGGAGATGAAATTC+GGG + chr4.1:23596482-23596501 None:intergenic 45.0%
GACGGGGTTTGGGAATAATA+AGG - chr4.1:23596931-23596950 MS.gene26633:CDS 45.0%
GGAATCCGGGAGATGAAATT+CGG + chr4.1:23596483-23596502 None:intergenic 45.0%
GGGTAATGAATTTGCGGTTG+AGG + chr4.1:23596462-23596481 None:intergenic 45.0%
TAAAGGTTCCGAGCCAAACA+CGG + chr4.1:23596724-23596743 None:intergenic 45.0%
TCCTCCTTTACATGCTGAGA+AGG + chr4.1:23596878-23596897 None:intergenic 45.0%
TCCTTCTCAGCATGTAAAGG+AGG - chr4.1:23596874-23596893 MS.gene26633:CDS 45.0%
TGAGAAGGAACAACCACTTC+TGG + chr4.1:23596863-23596882 None:intergenic 45.0%
TTGAAACAACGACGGGGTTT+GGG - chr4.1:23596921-23596940 MS.gene26633:CDS 45.0%
! CAGGTTTCCATGTTTGTTGG+TGG + chr4.1:23596548-23596567 None:intergenic 45.0%
!! CTGGAGATTCTTCTGGTTCT+AGG - chr4.1:23597020-23597039 MS.gene26633:CDS 45.0%
!! GATTCTTCTGGTTCTAGGAC+AGG - chr4.1:23597025-23597044 MS.gene26633:CDS 45.0%
CAGCAGCAGCATAGAACGAA+TGG - chr4.1:23596520-23596539 MS.gene26633:CDS 50.0%
CCGCAGGTTTCCATGTTTGT+TGG + chr4.1:23596551-23596570 None:intergenic 50.0%
GAAGGAACAACCACTTCTGG+TGG + chr4.1:23596860-23596879 None:intergenic 50.0%
GAGAGTGGTAGATGAGAAGG+AGG + chr4.1:23596378-23596397 None:intergenic 50.0%
GGAAAATTGAGCTTGGCCCT+CGG + chr4.1:23596803-23596822 None:intergenic 50.0%
GGTAGATGAGAAGGAGGAAG+AGG + chr4.1:23596372-23596391 None:intergenic 50.0%
GGTGAGAGTGGTAGATGAGA+AGG + chr4.1:23596381-23596400 None:intergenic 50.0%
TGAATTTGCGGTTGAGGTGG+AGG + chr4.1:23596456-23596475 None:intergenic 50.0%
TGCGGTGAATGCAACATAGC+AGG - chr4.1:23596566-23596585 MS.gene26633:CDS 50.0%
TGCTATGTTGCATTCACCGC+AGG + chr4.1:23596567-23596586 None:intergenic 50.0%
TGTTGAGGAACCACCAGAAG+TGG - chr4.1:23596847-23596866 MS.gene26633:CDS 50.0%
TTCTTGATCGGAGGTGAGAG+TGG + chr4.1:23596393-23596412 None:intergenic 50.0%
!! GACGGATTGTTCTTGATCGG+AGG + chr4.1:23596402-23596421 None:intergenic 50.0%
!! TTGGCTCGGAACCTTTACCA+CGG - chr4.1:23596727-23596746 MS.gene26633:CDS 50.0%
AGGAGTGAGGCAGAGACCAT+GGG - chr4.1:23596658-23596677 MS.gene26633:CDS 55.0%
ATTTGCGGTTGAGGTGGAGG+CGG + chr4.1:23596453-23596472 None:intergenic 55.0%
CATCTCCCGGATTCCACCAT+CGG - chr4.1:23596488-23596507 MS.gene26633:CDS 55.0%
GCAGAGACCATGGGGGAAAT+GGG - chr4.1:23596667-23596686 MS.gene26633:CDS 55.0%
GGCGGCATTGTCATAAGCTC+TGG + chr4.1:23596765-23596784 None:intergenic 55.0%
GGTTAGGGCGGTGACAATGA+CGG + chr4.1:23596420-23596439 None:intergenic 55.0%
! AGGCGGAGACTACGTTGGTT+AGG + chr4.1:23596436-23596455 None:intergenic 55.0%
! GGAGACTACGTTGGTTAGGG+CGG + chr4.1:23596432-23596451 None:intergenic 55.0%
! GGCGGAGACTACGTTGGTTA+GGG + chr4.1:23596435-23596454 None:intergenic 55.0%
!! CTGCTTCCGATGGTGGAATC+CGG + chr4.1:23596497-23596516 None:intergenic 55.0%
!! TGCTTCCGATGGTGGAATCC+GGG + chr4.1:23596496-23596515 None:intergenic 55.0%
AAACACGGACCGCACGTCTC+GGG + chr4.1:23596709-23596728 None:intergenic 60.0%
AATGCCGCCATCGAGTTCCG+TGG - chr4.1:23596776-23596795 MS.gene26633:CDS 60.0%
AGCTTCCTCCGCCGTGGTAA+AGG + chr4.1:23596741-23596760 None:intergenic 60.0%
ATGCCGCCATCGAGTTCCGT+GGG - chr4.1:23596777-23596796 MS.gene26633:CDS 60.0%
CAAACACGGACCGCACGTCT+CGG + chr4.1:23596710-23596729 None:intergenic 60.0%
GAGGAGTGAGGCAGAGACCA+TGG - chr4.1:23596657-23596676 MS.gene26633:CDS 60.0%
GAGTGAGGCAGAGACCATGG+GGG - chr4.1:23596660-23596679 MS.gene26633:CDS 60.0%
GATTCGTGACCCGAGACGTG+CGG - chr4.1:23596697-23596716 MS.gene26633:CDS 60.0%
GCTCGGAACCTTTACCACGG+CGG - chr4.1:23596730-23596749 MS.gene26633:CDS 60.0%
GGAGTGAGGCAGAGACCATG+GGG - chr4.1:23596659-23596678 MS.gene26633:CDS 60.0%
GGCAGAGACCATGGGGGAAA+TGG - chr4.1:23596666-23596685 MS.gene26633:CDS 60.0%
TCAGCAGCCCATTTCCCCCA+TGG + chr4.1:23596677-23596696 None:intergenic 60.0%
CATCGAGTTCCGTGGGCCGA+GGG - chr4.1:23596784-23596803 MS.gene26633:CDS 65.0%
CGAGACGTGCGGTCCGTGTT+TGG - chr4.1:23596708-23596727 MS.gene26633:CDS 65.0%
CGGAACCTTTACCACGGCGG+AGG - chr4.1:23596733-23596752 MS.gene26633:CDS 65.0%
CGTGCGGTCCGTGTTTGGCT+CGG - chr4.1:23596713-23596732 MS.gene26633:CDS 65.0%
GGTGGAGGCGGAGACTACGT+TGG + chr4.1:23596441-23596460 None:intergenic 65.0%
! GCTGCTGCTGCTGCTTCCGA+TGG + chr4.1:23596507-23596526 None:intergenic 65.0%
! GCTGCTGCTGCTTCCGATGG+TGG + chr4.1:23596504-23596523 None:intergenic 65.0%
CCATCGAGTTCCGTGGGCCG+AGG - chr4.1:23596783-23596802 MS.gene26633:CDS 70.0%
CCTCGGCCCACGGAACTCGA+TGG + chr4.1:23596786-23596805 None:intergenic 70.0%
CGGCCCACGGAACTCGATGG+CGG + chr4.1:23596783-23596802 None:intergenic 70.0%
TCTGGCAGCTTCCTCCGCCG+TGG + chr4.1:23596747-23596766 None:intergenic 70.0%
TGAGCTTGGCCCTCGGCCCA+CGG + chr4.1:23596796-23596815 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 23596359 23597063 23596359 ID=MS.gene26633
chr4.1 mRNA 23596359 23597063 23596359 ID=MS.gene26633.t1;Parent=MS.gene26633
chr4.1 exon 23596359 23597063 23596359 ID=MS.gene26633.t1.exon1;Parent=MS.gene26633.t1
chr4.1 CDS 23596359 23597063 23596359 ID=cds.MS.gene26633.t1;Parent=MS.gene26633.t1
Gene Sequence

>MS.gene26633

ATGAACAACTCCTCTTCCTCCTTCTCATCTACCACTCTCACCTCCGATCAAGAACAATCCGTCATTGTCACCGCCCTAACCAACGTAGTCTCCGCCTCCACCTCAACCGCAAATTCATTACCCGAATTTCATCTCCCGGATTCCACCATCGGAAGCAGCAGCAGCAGCAGCATAGAACGAATGGTTCCACCAACAAACATGGAAACCTGCGGTGAATGCAACATAGCAGGATGTTTAGGATGCAATTTCTTCTCTGAAGAGAACAAGAAAAAACAAAAGAGAGCTAAAAAGAAGTATAGAGGAGTGAGGCAGAGACCATGGGGGAAATGGGCTGCTGAGATTCGTGACCCGAGACGTGCGGTCCGTGTTTGGCTCGGAACCTTTACCACGGCGGAGGAAGCTGCCAGAGCTTATGACAATGCCGCCATCGAGTTCCGTGGGCCGAGGGCCAAGCTCAATTTTCCACTTGTTGATGAATCCCTTAAGAATGTTGAGGAACCACCAGAAGTGGTTGTTCCTTCTCAGCATGTAAAGGAGGAGAATATGAATCAAGAGATGCAAATTGAAACAACGACGGGGTTTGGGAATAATAAGGATTGTGATTTTTTGGATAGTATTGAGGACGCTGATTTTCAACAATTTATGAGGTTTATGGAATTTTCTGGAGATTCTTCTGGTTCTAGGACAGGGAATACTTTTAATTAG
Protein sequence

>MS.gene26633.t1

MNNSSSSFSSTTLTSDQEQSVIVTALTNVVSASTSTANSLPEFHLPDSTIGSSSSSSIERMVPPTNMETCGECNIAGCLGCNFFSEENKKKQKRAKKKYRGVRQRPWGKWAAEIRDPRRAVRVWLGTFTTAEEAARAYDNAAIEFRGPRAKLNFPLVDESLKNVEEPPEVVVPSQHVKEENMNQEMQIETTTGFGNNKDCDFLDSIEDADFQQFMRFMEFSGDSSGSRTGNTFN