AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35487

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35487.t1 MTR_4g086190 90.129 233 19 3 13 243 1 231 1.55e-140 393
MS.gene35487.t1 MTR_4g086160 77.130 223 47 3 21 242 12 231 4.98e-113 323
MS.gene35487.t1 MTR_4g086165 74.153 236 27 8 13 242 1 208 8.26e-107 307
MS.gene35487.t1 MTR_4g086220 71.369 241 51 6 11 241 1 233 1.83e-105 305
MS.gene35487.t1 MTR_7g021010 44.030 134 48 3 31 164 1 107 6.39e-30 110
MS.gene35487.t1 MTR_7g020980 44.030 134 48 3 31 164 1 107 1.15e-29 109
MS.gene35487.t1 MTR_7g021010 72.308 65 18 0 100 164 4 68 2.75e-29 107
MS.gene35487.t1 MTR_8g092460 73.438 64 17 0 101 164 138 201 1.17e-28 110
MS.gene35487.t1 MTR_2g435590 71.233 73 20 1 93 164 80 152 1.21e-28 109
MS.gene35487.t1 MTR_2g105380 67.606 71 23 0 94 164 103 173 1.57e-28 111
MS.gene35487.t1 MTR_1g087920 66.667 75 25 0 94 168 63 137 2.16e-28 109
MS.gene35487.t1 MTR_8g022820 50.000 112 51 2 94 200 110 221 3.68e-28 110
MS.gene35487.t1 MTR_8g022820 50.000 112 51 2 94 200 110 221 3.68e-28 110
MS.gene35487.t1 MTR_8g022820 50.000 112 51 2 94 200 109 220 3.82e-28 110
MS.gene35487.t1 MTR_5g009620 57.009 107 36 4 106 206 110 212 5.57e-28 108
MS.gene35487.t1 MTR_3g090760 53.333 105 44 3 106 207 111 213 9.86e-27 106
MS.gene35487.t1 MTR_4g078710 52.688 93 29 1 108 200 28 105 1.50e-26 102
MS.gene35487.t1 MTR_2g078680 61.728 81 29 1 92 172 17 95 2.91e-26 101
MS.gene35487.t1 MTR_2g014340 70.312 64 19 0 108 171 19 82 4.80e-26 100
MS.gene35487.t1 MTR_1g070070 69.444 72 20 2 95 164 7 78 3.46e-25 97.1
MS.gene35487.t1 MTR_2g015040 50.962 104 38 3 73 165 20 121 4.17e-25 97.4
MS.gene35487.t1 MTR_1g028560 66.667 75 23 1 105 179 112 184 1.50e-24 100
MS.gene35487.t1 MTR_3g053690 61.429 70 27 0 105 174 24 93 1.71e-24 97.4
MS.gene35487.t1 MTR_2g015050 49.138 116 48 5 65 172 85 197 2.03e-24 98.6
MS.gene35487.t1 MTR_5g085100 67.188 64 21 0 107 170 45 108 4.62e-24 97.8
MS.gene35487.t1 MTR_7g081815 59.494 79 31 1 106 183 59 137 1.18e-23 94.7
MS.gene35487.t1 MTR_8g099215 62.338 77 27 1 106 180 105 181 1.90e-23 96.7
MS.gene35487.t1 MTR_7g096700 68.000 75 21 2 93 164 3 77 2.46e-23 92.4
MS.gene35487.t1 MTR_4g088005 68.852 61 18 1 105 164 54 114 2.51e-23 91.7
MS.gene35487.t1 MTR_4g054740 41.667 132 57 4 43 171 49 163 3.41e-23 94.4
MS.gene35487.t1 MTR_7g081805 59.494 79 31 1 106 183 59 137 5.43e-23 93.2
MS.gene35487.t1 MTR_8g090350 39.286 168 62 7 103 239 108 266 8.25e-23 94.4
MS.gene35487.t1 MTR_4g100420 70.968 62 17 1 105 165 154 215 9.70e-23 94.7
MS.gene35487.t1 MTR_5g085070 64.062 64 23 0 107 170 50 113 1.12e-22 94.0
MS.gene35487.t1 MTR_3g102100 45.714 105 47 3 62 164 5 101 1.15e-22 91.3
MS.gene35487.t1 MTR_1g090170 37.342 158 80 4 18 164 59 208 1.38e-22 94.4
MS.gene35487.t1 MTR_7g081795 68.333 60 18 1 106 164 58 117 1.54e-22 92.0
MS.gene35487.t1 MTR_8g006840 68.254 63 19 1 108 169 125 187 1.55e-22 91.7
MS.gene35487.t1 MTR_4g100450 70.968 62 17 1 105 165 151 212 1.85e-22 94.0
MS.gene35487.t1 MTR_1g090170 38.667 150 73 4 26 164 154 295 1.96e-22 95.1
MS.gene35487.t1 MTR_4g100380 72.131 61 16 1 106 165 143 203 2.89e-22 92.4
MS.gene35487.t1 MTR_1g074310 60.526 76 26 3 93 164 3 78 2.91e-22 89.4
MS.gene35487.t1 MTR_4g010640 69.355 62 19 0 106 167 5 66 3.20e-22 91.3
MS.gene35487.t1 MTR_8g006825 59.211 76 26 2 106 180 94 165 3.50e-22 90.9
MS.gene35487.t1 MTR_3g098580 41.216 148 53 2 17 164 19 132 4.15e-22 92.0
MS.gene35487.t1 MTR_1g048610 43.571 140 60 6 43 172 30 160 5.77e-22 90.9
MS.gene35487.t1 MTR_4g114570 65.625 64 22 0 106 169 5 68 6.30e-22 90.5
MS.gene35487.t1 MTR_5g083340 63.077 65 24 0 102 166 79 143 6.32e-22 93.6
MS.gene35487.t1 MTR_8g006815 58.667 75 28 2 106 179 94 166 6.43e-22 90.1
MS.gene35487.t1 MTR_7g096750 74.576 59 14 1 107 164 19 77 7.57e-22 88.2
MS.gene35487.t1 MTR_4g008860 61.290 62 24 0 103 164 3 64 9.23e-22 89.7
MS.gene35487.t1 MTR_2g089170 48.958 96 49 0 108 203 65 160 1.12e-21 89.4
MS.gene35487.t1 MTR_5g062700 60.274 73 29 0 92 164 157 229 1.17e-21 92.4
MS.gene35487.t1 MTR_3g095190 76.923 65 15 0 100 164 162 226 1.81e-21 92.0
MS.gene35487.t1 MTR_5g082950 67.797 59 19 0 105 163 63 121 2.92e-21 90.9
MS.gene35487.t1 MTR_1g074230 72.881 59 15 1 107 164 18 76 2.96e-21 86.7
MS.gene35487.t1 MTR_1g069985 57.143 84 32 3 94 174 62 144 3.08e-21 88.6
MS.gene35487.t1 MTR_2g014300 70.175 57 17 0 108 164 15 71 3.62e-21 87.4
MS.gene35487.t1 MTR_8g102800 43.434 99 54 1 74 170 1 99 3.64e-21 89.0
MS.gene35487.t1 MTR_5g075570 57.971 69 29 0 103 171 119 187 4.01e-21 89.7
MS.gene35487.t1 MTR_4g054360 68.657 67 18 2 108 171 124 190 4.38e-21 89.4
MS.gene35487.t1 MTR_2g438180 62.687 67 24 1 99 164 5 71 4.49e-21 85.9
MS.gene35487.t1 MTR_3g074130 66.129 62 21 0 103 164 145 206 4.74e-21 90.5
MS.gene35487.t1 MTR_1g090290 56.338 71 30 1 96 165 101 171 5.36e-21 87.4
MS.gene35487.t1 MTR_2g103700 62.687 67 25 0 106 172 5 71 5.44e-21 87.0
MS.gene35487.t1 MTR_7g092190 65.517 58 20 0 107 164 29 86 8.75e-21 89.0
MS.gene35487.t1 MTR_6g088405 60.317 63 25 0 108 170 44 106 8.78e-21 87.4
MS.gene35487.t1 MTR_7g046260 49.351 77 39 0 94 170 47 123 9.95e-21 87.8
MS.gene35487.t1 MTR_4g054860 62.500 72 24 2 105 173 128 199 1.44e-20 88.2
MS.gene35487.t1 MTR_3g106290 61.290 62 24 0 103 164 3 64 2.95e-20 85.5
MS.gene35487.t1 MTR_1g070020 53.488 86 37 2 92 174 54 139 3.53e-20 85.9
MS.gene35487.t1 MTR_2g101340 47.059 85 37 1 94 170 19 103 4.11e-20 85.5
MS.gene35487.t1 MTR_1g070015 60.274 73 26 2 105 174 81 153 4.28e-20 85.9
MS.gene35487.t1 MTR_1g019110 59.016 61 25 0 104 164 40 100 4.51e-20 84.7
MS.gene35487.t1 MTR_2g090235 67.797 59 19 0 106 164 216 274 6.28e-20 88.2
MS.gene35487.t1 MTR_8g069360 54.795 73 33 0 104 176 40 112 7.00e-20 88.2
MS.gene35487.t1 MTR_6g012970 47.826 92 46 2 102 191 32 123 9.91e-20 87.4
MS.gene35487.t1 MTR_7g011630 56.164 73 31 1 101 172 35 107 1.36e-19 87.4
MS.gene35487.t1 MTR_4g119270 50.000 76 38 0 92 167 37 112 1.53e-19 86.3
MS.gene35487.t1 MTR_1g070000 54.321 81 34 2 97 174 73 153 1.95e-19 84.0
MS.gene35487.t1 MTR_2g019750 40.171 117 64 2 95 205 37 153 2.28e-19 85.1
MS.gene35487.t1 MTR_5g083330 57.534 73 28 1 96 168 26 95 2.45e-19 85.1
MS.gene35487.t1 MTR_4g082345 59.677 62 25 0 102 163 42 103 2.92e-19 85.1
MS.gene35487.t1 MTR_5g016750 54.098 61 28 0 104 164 21 81 3.29e-19 82.4
MS.gene35487.t1 MTR_0939s0010 62.903 62 23 0 108 169 65 126 5.08e-19 82.4
MS.gene35487.t1 MTR_3g110205 61.404 57 22 0 108 164 43 99 5.38e-19 82.0
MS.gene35487.t1 MTR_7g096810 68.750 64 19 1 102 164 7 70 5.46e-19 80.5
MS.gene35487.t1 MTR_1g070045 55.844 77 31 2 101 174 59 135 6.04e-19 81.6
MS.gene35487.t1 MTR_1g070035 41.860 129 55 4 53 174 31 146 6.36e-19 82.8
MS.gene35487.t1 MTR_4g100650 55.556 63 28 0 102 164 68 130 6.47e-19 83.2
MS.gene35487.t1 MTR_5g012910 49.367 79 39 1 93 170 12 90 6.87e-19 81.6
MS.gene35487.t1 MTR_1g069940 67.123 73 21 2 105 174 92 164 6.92e-19 82.8
MS.gene35487.t1 MTR_1g074250 68.333 60 17 1 107 164 18 77 7.83e-19 80.1
MS.gene35487.t1 MTR_2g016730 52.857 70 33 0 96 165 11 80 8.11e-19 84.3
MS.gene35487.t1 MTR_5g032820 54.667 75 34 0 107 181 45 119 9.80e-19 84.3
MS.gene35487.t1 MTR_8g013860 57.143 63 27 0 108 170 47 109 9.93e-19 81.6
MS.gene35487.t1 MTR_1g069960 74.576 59 14 1 107 164 26 84 1.13e-18 80.1
MS.gene35487.t1 MTR_4g111915 56.716 67 29 0 102 168 47 113 1.19e-18 79.7
MS.gene35487.t1 MTR_8g085960 55.072 69 28 1 98 163 12 80 1.39e-18 82.0
MS.gene35487.t1 MTR_8g023680 64.151 53 19 0 102 154 110 162 2.16e-18 83.6
MS.gene35487.t1 MTR_6g033255 66.667 72 24 0 105 176 17 88 2.23e-18 80.9
MS.gene35487.t1 MTR_4g112490 53.333 75 35 0 94 168 39 113 2.39e-18 80.9
MS.gene35487.t1 MTR_1g069945 67.123 73 21 2 105 174 98 170 3.03e-18 81.3
MS.gene35487.t1 MTR_6g029180 52.941 68 32 0 96 163 21 88 3.49e-18 82.4
MS.gene35487.t1 MTR_1g014860 57.627 59 25 0 106 164 20 78 4.52e-18 80.5
MS.gene35487.t1 MTR_1g014820 57.627 59 25 0 106 164 25 83 4.66e-18 81.3
MS.gene35487.t1 MTR_7g085810 52.941 68 32 0 96 163 18 85 5.07e-18 80.9
MS.gene35487.t1 MTR_8g006410 55.556 63 28 0 108 170 52 114 5.44e-18 79.7
MS.gene35487.t1 MTR_7g084370 66.667 57 19 0 107 163 41 97 5.54e-18 81.3
MS.gene35487.t1 MTR_1g014800 53.968 63 29 0 102 164 25 87 5.97e-18 80.1
MS.gene35487.t1 MTR_7g096830 42.763 152 55 6 98 223 91 236 7.83e-18 80.1
MS.gene35487.t1 MTR_1g043350 57.831 83 32 2 94 173 68 150 8.66e-18 79.3
MS.gene35487.t1 MTR_7g117690 56.140 57 25 0 108 164 28 84 1.06e-17 78.2
MS.gene35487.t1 MTR_1g014780 56.667 60 26 0 105 164 35 94 1.43e-17 79.3
MS.gene35487.t1 MTR_7g096780 66.667 75 22 2 102 173 79 153 1.67e-17 79.0
MS.gene35487.t1 MTR_7g070220 60.317 63 18 1 108 163 78 140 1.93e-17 81.3
MS.gene35487.t1 MTR_8g032610 53.030 66 31 0 101 166 20 85 6.32e-17 78.6
MS.gene35487.t1 MTR_8g027465 56.140 57 25 0 108 164 39 95 1.55e-16 75.1
MS.gene35487.t1 MTR_4g035430 47.761 67 35 0 98 164 22 88 2.26e-16 75.9
MS.gene35487.t1 MTR_3g112440 48.039 102 49 2 108 205 39 140 2.83e-16 75.5
MS.gene35487.t1 MTR_1g074370 46.957 115 49 4 103 210 68 177 3.03e-16 75.1
MS.gene35487.t1 MTR_3g017420 62.000 50 19 0 115 164 2 51 5.75e-16 70.9
MS.gene35487.t1 MTR_1g101600 60.714 56 22 0 108 163 41 96 1.19e-15 73.6
MS.gene35487.t1 MTR_3g105510 50.820 61 30 0 103 163 32 92 1.62e-15 73.9
MS.gene35487.t1 MTR_2g043050 56.140 57 25 0 108 164 19 75 1.69e-15 73.2
MS.gene35487.t1 MTR_1g097190 46.753 77 38 1 95 168 10 86 1.73e-15 71.6
MS.gene35487.t1 MTR_1g040430 63.462 52 18 1 115 165 118 169 1.89e-15 72.8
MS.gene35487.t1 MTR_1g110970 54.545 55 25 0 101 155 90 144 2.04e-15 74.7
MS.gene35487.t1 MTR_6g465530 54.412 68 30 1 96 163 22 88 3.76e-15 72.0
MS.gene35487.t1 MTR_1g105400 53.704 54 25 0 101 154 108 161 4.25e-15 73.9
MS.gene35487.t1 MTR_1g006660 54.321 81 34 1 93 170 29 109 5.66e-15 72.4
MS.gene35487.t1 MTR_6g465510 52.941 68 31 1 96 163 22 88 5.96e-15 71.6
MS.gene35487.t1 MTR_8g023700 55.556 54 24 0 101 154 110 163 6.22e-15 73.6
MS.gene35487.t1 MTR_2g043030 54.386 57 26 0 108 164 19 75 7.00e-15 71.2
MS.gene35487.t1 MTR_6g465690 47.945 73 37 1 92 163 46 118 9.48e-15 72.0
MS.gene35487.t1 MTR_6g466130 47.945 73 37 1 92 163 49 121 9.74e-15 71.6
MS.gene35487.t1 MTR_1g012470 63.934 61 22 0 105 165 4 64 1.01e-14 70.9
MS.gene35487.t1 MTR_6g088425 60.317 63 25 0 108 170 49 111 1.39e-14 71.2
MS.gene35487.t1 MTR_1g023170 51.948 77 37 0 96 172 28 104 1.68e-14 71.2
MS.gene35487.t1 MTR_6g465430 52.778 72 25 1 101 163 38 109 1.74e-14 70.9
MS.gene35487.t1 MTR_5g008590 58.730 63 26 0 108 170 11 73 1.91e-14 69.7
MS.gene35487.t1 MTR_3g107380 67.213 61 20 0 106 166 6 66 2.05e-14 70.1
MS.gene35487.t1 MTR_6g037610 82.000 50 9 0 115 164 187 236 2.86e-14 71.6
MS.gene35487.t1 MTR_1g098460 82.000 50 9 0 115 164 146 195 3.17e-14 71.6
MS.gene35487.t1 MTR_5g008540 50.000 62 31 0 110 171 26 87 3.30e-14 66.6
MS.gene35487.t1 MTR_6g465850 57.143 56 24 0 108 163 63 118 3.38e-14 70.9
MS.gene35487.t1 MTR_6g465460 51.389 72 26 1 101 163 38 109 3.50e-14 70.5
MS.gene35487.t1 MTR_6g466000 57.143 56 24 0 108 163 57 112 3.55e-14 69.7
MS.gene35487.t1 MTR_6g465450 50.000 72 27 1 101 163 38 109 4.15e-14 70.1
MS.gene35487.t1 MTR_6g466020 53.571 56 26 0 108 163 43 98 7.18e-14 68.2
MS.gene35487.t1 MTR_7g028925 54.237 59 24 1 106 164 27 82 7.31e-14 65.9
MS.gene35487.t1 MTR_4g102670 56.140 57 24 1 108 164 15 70 8.23e-14 67.8
MS.gene35487.t1 MTR_2g043040 52.632 57 27 0 108 164 19 75 8.69e-14 68.9
MS.gene35487.t1 MTR_5g008790 34.921 126 67 4 106 216 16 141 1.03e-13 67.4
MS.gene35487.t1 MTR_5g085125 49.275 69 35 0 107 175 15 83 2.54e-13 66.2
MS.gene35487.t1 MTR_6g465420 57.143 56 24 0 108 163 54 109 2.89e-13 67.8
MS.gene35487.t1 MTR_2g043020 50.877 57 28 0 108 164 19 75 4.78e-13 66.2
MS.gene35487.t1 MTR_5g009410 62.687 67 25 0 105 171 114 180 1.08e-12 66.6
MS.gene35487.t1 MTR_1g093600 36.364 121 56 2 42 162 17 116 1.33e-12 67.0
MS.gene35487.t1 MTR_3g105480 51.852 54 26 0 110 163 33 86 2.44e-12 64.7
MS.gene35487.t1 MTR_5g057810 59.184 49 20 0 107 155 87 135 2.76e-12 65.5
MS.gene35487.t1 MTR_5g057647 59.184 49 20 0 107 155 87 135 2.76e-12 65.5
MS.gene35487.t1 MTR_5g008470 47.826 69 31 1 107 170 69 137 5.26e-12 63.2
MS.gene35487.t1 MTR_3g072610 51.471 68 31 1 104 169 21 88 8.68e-12 63.2
MS.gene35487.t1 MTR_5g058470 56.452 62 26 1 105 165 93 154 2.37e-11 62.8
MS.gene35487.t1 MTR_5g053920 45.333 75 38 2 101 174 59 131 3.13e-11 62.8
MS.gene35487.t1 MTR_5g008550 44.737 76 42 0 95 170 8 83 6.12e-11 60.1
MS.gene35487.t1 MTR_1g101550 58.621 58 23 1 107 164 56 112 8.07e-11 60.5
MS.gene35487.t1 MTR_5g010940 50.000 62 25 1 108 163 54 115 8.36e-11 60.5
MS.gene35487.t1 MTR_2g085015 49.153 59 28 2 108 164 47 105 8.84e-11 60.5
MS.gene35487.t1 MTR_5g010910 43.750 80 34 2 95 163 31 110 9.89e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35487.t1 AT4G34410 47.283 184 57 5 17 167 19 195 8.09e-38 133
MS.gene35487.t1 AT5G67000 41.379 145 68 2 18 162 48 175 3.68e-30 111
MS.gene35487.t1 AT2G33710 80.000 60 12 0 105 164 67 126 4.98e-29 109
MS.gene35487.t1 AT2G33710 80.000 60 12 0 105 164 67 126 6.10e-29 109
MS.gene35487.t1 AT4G11140 81.356 59 11 0 106 164 85 143 1.01e-28 110
MS.gene35487.t1 AT2G47520 68.116 69 22 0 96 164 38 106 1.29e-28 107
MS.gene35487.t1 AT5G13330 66.197 71 24 0 94 164 25 95 1.31e-28 108
MS.gene35487.t1 AT5G61890 41.892 148 63 4 17 164 22 146 2.04e-28 108
MS.gene35487.t1 AT3G16770 66.667 72 24 0 93 164 64 135 4.85e-28 107
MS.gene35487.t1 AT4G27950 53.333 105 32 2 105 209 115 202 4.73e-27 106
MS.gene35487.t1 AT4G23750 72.581 62 17 0 104 165 118 179 4.87e-26 104
MS.gene35487.t1 AT4G23750 72.581 62 17 0 104 165 118 179 4.87e-26 104
MS.gene35487.t1 AT1G72360 58.667 75 31 0 90 164 7 81 6.32e-26 100
MS.gene35487.t1 AT1G72360 67.188 64 21 0 101 164 69 132 1.44e-25 101
MS.gene35487.t1 AT1G72360 67.188 64 21 0 101 164 67 130 1.60e-25 101
MS.gene35487.t1 AT5G44210 68.657 67 21 0 103 169 28 94 1.92e-25 99.4
MS.gene35487.t1 AT3G15210 57.831 83 34 1 86 168 4 85 2.61e-25 99.8
MS.gene35487.t1 AT1G03800 63.636 66 24 0 101 166 46 111 5.45e-25 99.4
MS.gene35487.t1 AT1G28370 74.138 58 15 0 107 164 57 114 1.12e-24 97.4
MS.gene35487.t1 AT5G53290 73.333 60 16 0 106 165 123 182 1.42e-24 100
MS.gene35487.t1 AT1G28370 74.138 58 15 0 107 164 19 76 2.05e-24 95.9
MS.gene35487.t1 AT3G61630 54.348 92 23 2 95 167 80 171 2.14e-24 99.4
MS.gene35487.t1 AT5G65130 40.972 144 63 4 106 231 109 248 8.66e-24 97.1
MS.gene35487.t1 AT5G65130 40.972 144 63 4 106 231 111 250 9.06e-24 97.1
MS.gene35487.t1 AT5G50080 48.299 147 52 4 28 164 1 133 1.43e-23 95.1
MS.gene35487.t1 AT5G51190 65.152 66 22 1 101 165 65 130 1.49e-23 95.1
MS.gene35487.t1 AT5G50080 72.973 74 14 1 91 164 75 142 1.98e-23 94.7
MS.gene35487.t1 AT5G47230 74.194 62 15 1 105 165 153 214 2.29e-23 96.3
MS.gene35487.t1 AT1G50640 69.492 59 18 0 107 165 27 85 5.45e-23 93.6
MS.gene35487.t1 AT1G43160 45.833 144 41 3 31 164 1 117 8.00e-23 92.4
MS.gene35487.t1 AT4G39780 42.742 124 65 3 42 164 31 149 9.02e-23 94.0
MS.gene35487.t1 AT2G44840 58.108 74 30 1 99 171 83 156 1.22e-22 92.8
MS.gene35487.t1 AT3G20310 46.809 94 44 1 107 200 26 113 1.60e-22 92.8
MS.gene35487.t1 AT1G22985 67.606 71 18 2 105 170 72 142 1.64e-22 90.5
MS.gene35487.t1 AT5G47220 72.131 61 16 1 106 165 115 175 1.69e-22 92.8
MS.gene35487.t1 AT5G07310 78.333 60 13 0 105 164 89 148 2.12e-22 92.8
MS.gene35487.t1 AT5G43410 74.576 59 14 1 107 164 14 72 2.12e-22 89.4
MS.gene35487.t1 AT2G22200 66.129 62 21 0 103 164 66 127 2.34e-22 92.8
MS.gene35487.t1 AT4G17500 72.131 61 16 1 106 165 146 206 2.51e-22 92.8
MS.gene35487.t1 AT1G36060 65.625 64 22 0 103 166 138 201 3.56e-22 93.2
MS.gene35487.t1 AT4G17490 70.968 62 17 1 105 165 134 195 4.37e-22 92.4
MS.gene35487.t1 AT4G13620 65.672 67 23 0 106 172 230 296 4.43e-22 94.0
MS.gene35487.t1 AT1G22190 67.742 62 20 0 103 164 78 139 4.68e-22 92.0
MS.gene35487.t1 AT2G20880 61.842 76 26 1 104 179 183 255 5.46e-22 93.2
MS.gene35487.t1 AT3G23240 59.211 76 28 2 102 174 76 151 6.08e-22 90.5
MS.gene35487.t1 AT2G31230 64.384 73 23 2 105 174 83 155 6.39e-22 91.3
MS.gene35487.t1 AT4G28140 53.933 89 32 1 104 183 139 227 7.33e-22 92.0
MS.gene35487.t1 AT2G46310 47.273 110 52 2 107 210 98 207 8.12e-22 92.0
MS.gene35487.t1 AT3G23230 68.852 61 18 1 105 164 17 77 1.67e-21 87.4
MS.gene35487.t1 AT1G78080 67.742 62 20 0 103 164 147 208 1.89e-21 91.7
MS.gene35487.t1 AT1G15360 66.667 60 20 0 106 165 5 64 1.98e-21 89.0
MS.gene35487.t1 AT1G15360 66.667 60 20 0 106 165 5 64 1.98e-21 89.0
MS.gene35487.t1 AT5G25390 60.000 70 28 0 106 175 5 74 2.15e-21 88.6
MS.gene35487.t1 AT5G25190 61.290 62 24 0 103 164 3 64 3.57e-21 87.8
MS.gene35487.t1 AT4G32800 53.846 78 32 1 93 170 8 81 3.80e-21 88.6
MS.gene35487.t1 AT1G71130 56.471 85 29 2 100 179 71 152 3.82e-21 87.0
MS.gene35487.t1 AT5G61600 63.934 61 21 1 106 165 86 146 3.85e-21 89.0
MS.gene35487.t1 AT5G05410 66.129 62 21 0 108 169 79 140 4.00e-21 90.1
MS.gene35487.t1 AT1G75490 44.643 112 49 3 65 172 1 103 4.18e-21 88.2
MS.gene35487.t1 AT5G05410 66.129 62 21 0 108 169 79 140 5.51e-21 90.5
MS.gene35487.t1 AT1G28360 68.966 58 18 0 107 164 11 68 5.80e-21 87.4
MS.gene35487.t1 AT2G23340 57.812 64 27 0 101 164 21 84 6.62e-21 87.0
MS.gene35487.t1 AT4G06746 59.322 59 24 0 106 164 34 92 8.70e-21 85.9
MS.gene35487.t1 AT4G36900 55.556 63 28 0 102 164 24 86 1.42e-20 86.7
MS.gene35487.t1 AT1G46768 54.795 73 31 1 92 164 17 87 1.50e-20 85.1
MS.gene35487.t1 AT1G46768 54.795 73 31 1 92 164 17 87 1.73e-20 85.1
MS.gene35487.t1 AT1G46768 54.795 73 31 1 92 164 17 87 1.73e-20 85.1
MS.gene35487.t1 AT2G20350 41.216 148 65 4 12 159 13 138 1.78e-20 85.1
MS.gene35487.t1 AT5G64750 78.000 50 11 0 115 164 192 241 1.82e-20 89.4
MS.gene35487.t1 AT5G25810 55.556 72 32 0 93 164 21 92 2.07e-20 86.7
MS.gene35487.t1 AT5G19790 58.571 70 29 0 94 163 8 77 2.96e-20 87.0
MS.gene35487.t1 AT1G71450 53.333 75 35 0 96 170 12 86 3.19e-20 85.1
MS.gene35487.t1 AT5G11590 53.846 78 35 1 94 170 36 113 3.99e-20 86.3
MS.gene35487.t1 AT5G07580 53.425 73 33 1 94 165 96 168 4.58e-20 85.5
MS.gene35487.t1 AT4G16750 56.338 71 29 1 96 164 26 96 5.35e-20 84.7
MS.gene35487.t1 AT3G57600 63.793 58 21 0 107 164 27 84 6.56e-20 86.7
MS.gene35487.t1 AT5G67190 43.333 90 38 1 102 191 15 91 7.00e-20 84.3
MS.gene35487.t1 AT5G13910 54.795 73 33 0 95 167 7 79 7.93e-20 84.7
MS.gene35487.t1 AT5G25390 58.571 70 26 1 106 175 5 71 8.38e-20 84.3
MS.gene35487.t1 AT3G16280 63.158 57 21 0 108 164 61 117 1.28e-19 84.7
MS.gene35487.t1 AT1G21910 54.839 62 28 0 108 169 50 111 1.30e-19 84.7
MS.gene35487.t1 AT3G16280 63.158 57 21 0 108 164 79 135 1.41e-19 85.1
MS.gene35487.t1 AT2G25820 63.158 57 21 0 108 164 26 82 1.47e-19 84.3
MS.gene35487.t1 AT2G44940 54.286 70 32 0 95 164 87 156 2.36e-19 85.1
MS.gene35487.t1 AT2G35700 61.404 57 22 0 108 164 45 101 2.41e-19 83.2
MS.gene35487.t1 AT4G18450 67.742 62 18 2 106 165 108 169 2.54e-19 85.1
MS.gene35487.t1 AT3G50260 55.385 65 28 1 100 164 14 77 2.94e-19 82.0
MS.gene35487.t1 AT1G12980 66.667 57 19 0 107 163 56 112 4.57e-19 85.1
MS.gene35487.t1 AT3G11020 64.912 57 20 0 108 164 78 134 5.42e-19 84.7
MS.gene35487.t1 AT3G60490 61.404 57 22 0 108 164 71 127 1.49e-18 82.4
MS.gene35487.t1 AT1G01250 36.667 120 66 3 108 223 45 158 1.53e-18 80.9
MS.gene35487.t1 AT5G18560 51.429 70 34 0 94 163 41 110 1.86e-18 83.6
MS.gene35487.t1 AT5G18450 57.353 68 29 0 96 163 22 89 2.46e-18 82.8
MS.gene35487.t1 AT3G14230 66.197 71 24 0 94 164 110 180 4.97e-18 82.4
MS.gene35487.t1 AT3G14230 66.197 71 24 0 94 164 109 179 5.09e-18 82.4
MS.gene35487.t1 AT3G14230 66.197 71 24 0 94 164 114 184 5.52e-18 82.4
MS.gene35487.t1 AT1G24590 66.667 57 19 0 107 163 57 113 5.93e-18 81.6
MS.gene35487.t1 AT1G12890 55.714 70 31 0 94 163 7 76 6.00e-18 80.1
MS.gene35487.t1 AT2G40340 59.322 59 24 0 108 166 14 72 6.00e-18 81.3
MS.gene35487.t1 AT2G40340 59.322 59 24 0 108 166 14 72 6.00e-18 81.3
MS.gene35487.t1 AT2G40340 59.322 59 24 0 108 166 14 72 6.00e-18 81.3
MS.gene35487.t1 AT5G67010 35.772 123 56 3 22 141 21 123 7.66e-18 78.6
MS.gene35487.t1 AT1G53910 64.000 75 25 1 97 171 114 186 8.19e-18 81.6
MS.gene35487.t1 AT1G53910 64.000 75 25 1 97 171 114 186 8.19e-18 81.6
MS.gene35487.t1 AT5G21960 59.016 61 25 0 104 164 3 63 8.65e-18 79.7
MS.gene35487.t1 AT1G53910 64.000 75 25 1 97 171 112 184 8.73e-18 81.6
MS.gene35487.t1 AT1G06160 65.278 72 22 2 106 174 80 151 9.89e-18 80.1
MS.gene35487.t1 AT2G40340 59.322 59 24 0 108 166 79 137 2.28e-17 80.5
MS.gene35487.t1 AT2G40340 59.322 59 24 0 108 166 72 130 2.41e-17 80.1
MS.gene35487.t1 AT2G40340 59.322 59 24 0 108 166 72 130 2.55e-17 79.7
MS.gene35487.t1 AT2G40350 55.932 59 26 0 108 166 74 132 2.65e-17 77.0
MS.gene35487.t1 AT1G28160 62.295 61 23 0 107 167 38 98 2.75e-17 78.6
MS.gene35487.t1 AT2G40350 55.932 59 26 0 108 166 67 125 2.99e-17 76.6
MS.gene35487.t1 AT4G25470 48.235 85 36 1 87 163 22 106 3.42e-17 77.8
MS.gene35487.t1 AT1G74930 42.045 88 48 1 94 178 7 94 4.22e-17 77.0
MS.gene35487.t1 AT4G25490 47.059 85 37 1 87 163 19 103 1.11e-16 76.6
MS.gene35487.t1 AT2G36450 50.667 75 33 2 108 181 15 86 1.39e-16 75.5
MS.gene35487.t1 AT1G68550 68.000 50 16 0 105 154 110 159 1.74e-16 77.8
MS.gene35487.t1 AT1G68550 68.000 50 16 0 105 154 110 159 1.74e-16 77.8
MS.gene35487.t1 AT3G23220 67.164 67 21 1 107 172 13 79 1.76e-16 73.9
MS.gene35487.t1 AT1G19210 55.000 60 27 0 105 164 9 68 1.82e-16 75.1
MS.gene35487.t1 AT4G25480 45.882 85 38 1 87 163 22 106 1.91e-16 75.9
MS.gene35487.t1 AT4G31060 48.000 75 38 1 90 164 10 83 1.97e-16 75.1
MS.gene35487.t1 AT5G51990 42.478 113 46 3 101 204 38 140 6.90e-16 74.7
MS.gene35487.t1 AT1G53170 63.768 69 24 1 99 166 21 89 8.24e-16 73.6
MS.gene35487.t1 AT2G40220 60.000 70 28 0 94 163 41 110 1.43e-15 75.1
MS.gene35487.t1 AT1G04370 72.881 59 15 1 107 164 19 77 3.37e-15 70.5
MS.gene35487.t1 AT1G77200 58.462 65 27 0 100 164 35 99 4.25e-15 72.8
MS.gene35487.t1 AT5G11190 56.579 76 28 1 106 176 5 80 5.68e-15 71.2
MS.gene35487.t1 AT1G77640 48.193 83 40 1 102 181 37 119 5.92e-15 72.4
MS.gene35487.t1 AT1G22810 38.000 100 53 3 104 200 10 103 9.36e-14 67.0
MS.gene35487.t1 AT1G64380 54.878 82 30 1 103 184 131 205 9.45e-14 70.1
MS.gene35487.t1 AT5G61590 56.338 71 30 1 96 165 95 165 1.73e-13 67.4
MS.gene35487.t1 AT2G38340 59.091 66 19 1 107 164 69 134 1.88e-13 68.2
MS.gene35487.t1 AT1G63030 47.368 76 35 1 93 163 10 85 4.86e-13 65.9
MS.gene35487.t1 AT1G63030 47.368 76 35 1 93 163 10 85 4.86e-13 65.9
MS.gene35487.t1 AT3G25890 64.444 45 16 0 110 154 133 177 1.02e-12 67.0
MS.gene35487.t1 AT3G25890 64.444 45 16 0 110 154 133 177 1.02e-12 67.0
MS.gene35487.t1 AT1G12610 41.772 79 41 1 90 163 7 85 1.74e-12 65.1
MS.gene35487.t1 AT1G71520 46.875 64 30 1 105 164 11 74 1.82e-12 63.5
MS.gene35487.t1 AT1G49120 61.702 47 18 0 108 154 87 133 2.20e-12 65.9
MS.gene35487.t1 AT1G68840 46.753 77 39 1 92 168 49 123 3.95e-12 65.5
MS.gene35487.t1 AT1G68840 46.753 77 39 1 92 168 49 123 3.95e-12 65.5
MS.gene35487.t1 AT1G33760 52.239 67 32 0 108 174 20 86 5.88e-12 63.2
MS.gene35487.t1 AT1G44830 54.545 66 29 1 106 170 33 98 1.47e-11 62.4
MS.gene35487.t1 AT2G39250 42.105 95 47 3 94 182 95 187 3.52e-11 61.6

Find 75 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACAACTAATGAGGTTTA+TGG 0.166648 4.3:-26689221 MS.gene35487:CDS
ATTGAGACAAATATGGGATT+TGG 0.243614 4.3:-26689292 MS.gene35487:CDS
GGCAGAGGCCATGGGGAAAA+TGG 0.260541 4.3:-26689543 MS.gene35487:CDS
AATGCAAATTGAGACAAATA+TGG 0.265350 4.3:-26689299 MS.gene35487:CDS
ATAATAAGGATTGTGATTAT+TGG 0.269800 4.3:-26689267 MS.gene35487:CDS
TATGGGATTTGGGAATAATA+AGG 0.286148 4.3:-26689281 MS.gene35487:CDS
ACTAAAAGTGTTCCATGTTC+TGG 0.297402 4.3:+26689174 None:intergenic
TAATAAGGATTGTGATTATT+GGG 0.318423 4.3:-26689266 MS.gene35487:CDS
TCTGTTGTTGTGAGTGAGTT+TGG 0.326397 4.3:+26689873 None:intergenic
TCCAAAGGGACAACCACTTC+TGG 0.329688 4.3:+26689352 None:intergenic
ATCCTGCTATGTTGCATTCT+CGG 0.340084 4.3:+26689647 None:intergenic
CGAGACGTGCGGTCCGTGTT+TGG 0.360884 4.3:-26689501 MS.gene35487:CDS
TTGAGACAAATATGGGATTT+GGG 0.361286 4.3:-26689291 MS.gene35487:CDS
GCCAGAAGTGGTTGTCCCTT+TGG 0.361757 4.3:-26689353 MS.gene35487:CDS
TGTCCCTTTGGAGGATATAA+AGG 0.371554 4.3:-26689341 MS.gene35487:CDS
GCAGAGGCCATGGGGAAAAT+GGG 0.401441 4.3:-26689542 MS.gene35487:CDS
CAAGATACCATGTTCACTTC+CGG 0.414333 4.3:+26689670 None:intergenic
AGCTTCTTCCGCCGTGGTAA+AGG 0.419719 4.3:+26689471 None:intergenic
GAGGAGTGAGGCAGAGGCCA+TGG 0.424131 4.3:-26689552 MS.gene35487:CDS
CGTGCGGTCCGTGTTTGGCT+CGG 0.435176 4.3:-26689496 MS.gene35487:CDS
TGATCCGTGAGGCAAAATTC+AGG 0.438212 4.3:+26689730 None:intergenic
GGTGAGGGTGGTGGTGGAGA+AGG 0.454388 4.3:+26689831 None:intergenic
GTGCGGTCCGTGTTTGGCTC+GGG 0.455397 4.3:-26689495 MS.gene35487:CDS
ATCGGAGGTGAGGGTGGTGG+TGG 0.456825 4.3:+26689825 None:intergenic
AGGAGTGAGGCAGAGGCCAT+GGG 0.478974 4.3:-26689551 MS.gene35487:CDS
ATGCAAATTGAGACAAATAT+GGG 0.479691 4.3:-26689298 MS.gene35487:CDS
TATGGAAAACGCGGTGGAGG+TGG 0.486810 4.3:+26689753 None:intergenic
AAACGCGGTGGAGGTGGAGC+CGG 0.490820 4.3:+26689759 None:intergenic
TGCAACATAGCAGGATGCTT+AGG 0.493726 4.3:-26689640 MS.gene35487:CDS
AGTACAGAGGAGTGAGGCAG+AGG 0.495675 4.3:-26689558 MS.gene35487:CDS
AAACACGGACCGCACGTCTC+GGG 0.502410 4.3:+26689503 None:intergenic
AGCAGCATTGTCGTAAGCTC+TGG 0.505689 4.3:+26689447 None:intergenic
TGCCGAGAATGCAACATAGC+AGG 0.511948 4.3:-26689649 MS.gene35487:CDS
TTGATCGGAGGTGAGGGTGG+TGG 0.516391 4.3:+26689822 None:intergenic
AGAAGTGGTTGTCCCTTTGG+AGG 0.528380 4.3:-26689350 MS.gene35487:CDS
CAAACACGGACCGCACGTCT+CGG 0.535999 4.3:+26689502 None:intergenic
TGTGATTATTGGGATAGTAT+CGG 0.542915 4.3:-26689256 MS.gene35487:CDS
CGTCCTTTATATCCTCCAAA+GGG 0.548435 4.3:+26689338 None:intergenic
AGGTATGGAAAACGCGGTGG+AGG 0.548473 4.3:+26689750 None:intergenic
CGTGAGGCAAAATTCAGGTA+TGG 0.556005 4.3:+26689735 None:intergenic
GAATTCTTGATCGGAGGTGA+GGG 0.564059 4.3:+26689816 None:intergenic
CAGTTTAGAACGAATAGTGC+CGG 0.564131 4.3:-26689689 MS.gene35487:CDS
TCGTCCTTTATATCCTCCAA+AGG 0.564254 4.3:+26689337 None:intergenic
TAAACTGCTGCTTCCGACAG+TGG 0.564361 4.3:+26689705 None:intergenic
CTCACGGATCACTCCACTGT+CGG 0.568227 4.3:-26689718 MS.gene35487:CDS
TGAGCTTGGCTCTCGGCCCA+CGG 0.568341 4.3:+26689416 None:intergenic
AATGCTGCTATCGAGTTCCG+TGG 0.573830 4.3:-26689433 MS.gene35487:CDS
AACGACGGGAAAATTGAGCT+TGG 0.576286 4.3:+26689402 None:intergenic
TTCTTGATCGGAGGTGAGGG+TGG 0.576817 4.3:+26689819 None:intergenic
AGAATTCTTGATCGGAGGTG+AGG 0.578370 4.3:+26689815 None:intergenic
ATTCTTCTGACTCCAGAACA+TGG 0.580276 4.3:-26689186 MS.gene35487:CDS
GGAAAATTGAGCTTGGCTCT+CGG 0.582771 4.3:+26689409 None:intergenic
AATAGTGCCGGAAGTGAACA+TGG 0.591939 4.3:-26689677 MS.gene35487:CDS
TTAAGCGATTCATCAACGAC+GGG 0.595662 4.3:+26689388 None:intergenic
GCTCTAACCAACGTAGTCTC+CGG 0.597841 4.3:-26689778 MS.gene35487:CDS
GATGGCAGAGAATTCTTGAT+CGG 0.603483 4.3:+26689807 None:intergenic
TGATGAATCGCTTAAGAACG+TGG 0.611709 4.3:-26689380 MS.gene35487:CDS
GGCAGAGAATTCTTGATCGG+AGG 0.620344 4.3:+26689810 None:intergenic
TTGGCTCGGGACCTTTACCA+CGG 0.622839 4.3:-26689482 MS.gene35487:CDS
CTTAAGCGATTCATCAACGA+CGG 0.628790 4.3:+26689387 None:intergenic
GAACGTGGAGGAGCCAGAAG+TGG 0.633912 4.3:-26689365 MS.gene35487:CDS
ATGCTGCTATCGAGTTCCGT+GGG 0.636885 4.3:-26689432 MS.gene35487:CDS
TAAAGGTCCCGAGCCAAACA+CGG 0.637276 4.3:+26689488 None:intergenic
GTTGGTTAGAGCAGCGACGA+TGG 0.650660 4.3:+26689789 None:intergenic
GGAGTGAGGCAGAGGCCATG+GGG 0.658766 4.3:-26689550 MS.gene35487:CDS
TCTGGCAGCTTCTTCCGCCG+TGG 0.663632 4.3:+26689465 None:intergenic
GATTCGTGACCCGAGACGTG+CGG 0.666469 4.3:-26689512 MS.gene35487:CDS
TTCAGGTATGGAAAACGCGG+TGG 0.673360 4.3:+26689747 None:intergenic
AGAGCTAAGAAGAAGTACAG+AGG 0.676163 4.3:-26689571 MS.gene35487:CDS
AGAAGAAGTACAGAGGAGTG+AGG 0.683711 4.3:-26689564 MS.gene35487:CDS
GGTGGAGCCGGAGACTACGT+TGG 0.715698 4.3:+26689771 None:intergenic
CGACAGTGGAGTGATCCGTG+AGG 0.727066 4.3:+26689719 None:intergenic
AAATTCAGGTATGGAAAACG+CGG 0.727381 4.3:+26689744 None:intergenic
GCTCGGGACCTTTACCACGG+CGG 0.766957 4.3:-26689479 MS.gene35487:CDS
TGAATCGCTTAAGAACGTGG+AGG 0.768895 4.3:-26689377 MS.gene35487:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAAGGATTGTGATTAT+TGG - chr4.3:26689778-26689797 MS.gene35487:CDS 20.0%
!! TAATAAGGATTGTGATTATT+GGG - chr4.3:26689779-26689798 MS.gene35487:CDS 20.0%
! AATGCAAATTGAGACAAATA+TGG - chr4.3:26689746-26689765 MS.gene35487:CDS 25.0%
! ATGCAAATTGAGACAAATAT+GGG - chr4.3:26689747-26689766 MS.gene35487:CDS 25.0%
!!! GTTTTTGTTTTTTCTCTTCA+GGG + chr4.3:26689443-26689462 None:intergenic 25.0%
!!! TGTTTTTGTTTTTTCTCTTC+AGG + chr4.3:26689444-26689463 None:intergenic 25.0%
ATTGAGACAAATATGGGATT+TGG - chr4.3:26689753-26689772 MS.gene35487:CDS 30.0%
TATGGGATTTGGGAATAATA+AGG - chr4.3:26689764-26689783 MS.gene35487:CDS 30.0%
TCAACAACTAATGAGGTTTA+TGG - chr4.3:26689824-26689843 MS.gene35487:CDS 30.0%
TGTGATTATTGGGATAGTAT+CGG - chr4.3:26689789-26689808 MS.gene35487:CDS 30.0%
TTGAGACAAATATGGGATTT+GGG - chr4.3:26689754-26689773 MS.gene35487:CDS 30.0%
! CTGATTTTCAACAACTAATG+AGG - chr4.3:26689817-26689836 MS.gene35487:CDS 30.0%
AAATTCAGGTATGGAAAACG+CGG + chr4.3:26689304-26689323 None:intergenic 35.0%
!! ACTAAAAGTGTTCCATGTTC+TGG + chr4.3:26689874-26689893 None:intergenic 35.0%
ATCCTGCTATGTTGCATTCT+CGG + chr4.3:26689401-26689420 None:intergenic 40.0%
ATTCTTCTGACTCCAGAACA+TGG - chr4.3:26689859-26689878 MS.gene35487:CDS 40.0%
CAAGATACCATGTTCACTTC+CGG + chr4.3:26689378-26689397 None:intergenic 40.0%
CGTCCTTTATATCCTCCAAA+GGG + chr4.3:26689710-26689729 None:intergenic 40.0%
CTTAAGCGATTCATCAACGA+CGG + chr4.3:26689661-26689680 None:intergenic 40.0%
GATGGCAGAGAATTCTTGAT+CGG + chr4.3:26689241-26689260 None:intergenic 40.0%
TCGTCCTTTATATCCTCCAA+AGG + chr4.3:26689711-26689730 None:intergenic 40.0%
TCTGTTGTTGTGAGTGAGTT+TGG + chr4.3:26689175-26689194 None:intergenic 40.0%
TGATGAATCGCTTAAGAACG+TGG - chr4.3:26689665-26689684 MS.gene35487:CDS 40.0%
TTAAGCGATTCATCAACGAC+GGG + chr4.3:26689660-26689679 None:intergenic 40.0%
! AGAGCTAAGAAGAAGTACAG+AGG - chr4.3:26689474-26689493 MS.gene35487:CDS 40.0%
! CAGTTTAGAACGAATAGTGC+CGG - chr4.3:26689356-26689375 MS.gene35487:CDS 40.0%
! CATACCTGAATTTTGCCTCA+CGG - chr4.3:26689311-26689330 MS.gene35487:CDS 40.0%
! TGTCCCTTTGGAGGATATAA+AGG - chr4.3:26689704-26689723 MS.gene35487:CDS 40.0%
AACGACGGGAAAATTGAGCT+TGG + chr4.3:26689646-26689665 None:intergenic 45.0%
AGAATTCTTGATCGGAGGTG+AGG + chr4.3:26689233-26689252 None:intergenic 45.0%
CGTGAGGCAAAATTCAGGTA+TGG + chr4.3:26689313-26689332 None:intergenic 45.0%
GAATTCTTGATCGGAGGTGA+GGG + chr4.3:26689232-26689251 None:intergenic 45.0%
TGAATCGCTTAAGAACGTGG+AGG - chr4.3:26689668-26689687 MS.gene35487:CDS 45.0%
TGATCCGTGAGGCAAAATTC+AGG + chr4.3:26689318-26689337 None:intergenic 45.0%
TGCAACATAGCAGGATGCTT+AGG - chr4.3:26689405-26689424 MS.gene35487:CDS 45.0%
! AATAGTGCCGGAAGTGAACA+TGG - chr4.3:26689368-26689387 MS.gene35487:CDS 45.0%
! AGAAGAAGTACAGAGGAGTG+AGG - chr4.3:26689481-26689500 MS.gene35487:CDS 45.0%
! GGAAAATTGAGCTTGGCTCT+CGG + chr4.3:26689639-26689658 None:intergenic 45.0%
AATGCTGCTATCGAGTTCCG+TGG - chr4.3:26689612-26689631 MS.gene35487:CDS 50.0%
AGAAGTGGTTGTCCCTTTGG+AGG - chr4.3:26689695-26689714 MS.gene35487:CDS 50.0%
AGCAGCATTGTCGTAAGCTC+TGG + chr4.3:26689601-26689620 None:intergenic 50.0%
ATGCTGCTATCGAGTTCCGT+GGG - chr4.3:26689613-26689632 MS.gene35487:CDS 50.0%
GCTCTAACCAACGTAGTCTC+CGG - chr4.3:26689267-26689286 MS.gene35487:CDS 50.0%
GGCAGAGAATTCTTGATCGG+AGG + chr4.3:26689238-26689257 None:intergenic 50.0%
TAAAGGTCCCGAGCCAAACA+CGG + chr4.3:26689560-26689579 None:intergenic 50.0%
TCCAAAGGGACAACCACTTC+TGG + chr4.3:26689696-26689715 None:intergenic 50.0%
TGCCGAGAATGCAACATAGC+AGG - chr4.3:26689396-26689415 MS.gene35487:CDS 50.0%
TTCAGGTATGGAAAACGCGG+TGG + chr4.3:26689301-26689320 None:intergenic 50.0%
! TAAACTGCTGCTTCCGACAG+TGG + chr4.3:26689343-26689362 None:intergenic 50.0%
AGCTTCTTCCGCCGTGGTAA+AGG + chr4.3:26689577-26689596 None:intergenic 55.0%
AGGTATGGAAAACGCGGTGG+AGG + chr4.3:26689298-26689317 None:intergenic 55.0%
AGTACAGAGGAGTGAGGCAG+AGG - chr4.3:26689487-26689506 MS.gene35487:CDS 55.0%
CTCACGGATCACTCCACTGT+CGG - chr4.3:26689327-26689346 MS.gene35487:CDS 55.0%
GCAGAGGCCATGGGGAAAAT+GGG - chr4.3:26689503-26689522 MS.gene35487:CDS 55.0%
GCCAGAAGTGGTTGTCCCTT+TGG - chr4.3:26689692-26689711 MS.gene35487:CDS 55.0%
GTTGGTTAGAGCAGCGACGA+TGG + chr4.3:26689259-26689278 None:intergenic 55.0%
TATGGAAAACGCGGTGGAGG+TGG + chr4.3:26689295-26689314 None:intergenic 55.0%
TTCTTGATCGGAGGTGAGGG+TGG + chr4.3:26689229-26689248 None:intergenic 55.0%
! TCAGCAGCCCATTTTCCCCA+TGG + chr4.3:26689513-26689532 None:intergenic 55.0%
!! TTGGCTCGGGACCTTTACCA+CGG - chr4.3:26689563-26689582 MS.gene35487:CDS 55.0%
AAACACGGACCGCACGTCTC+GGG + chr4.3:26689545-26689564 None:intergenic 60.0%
AGGAGTGAGGCAGAGGCCAT+GGG - chr4.3:26689494-26689513 MS.gene35487:CDS 60.0%
CAAACACGGACCGCACGTCT+CGG + chr4.3:26689546-26689565 None:intergenic 60.0%
CGACAGTGGAGTGATCCGTG+AGG + chr4.3:26689329-26689348 None:intergenic 60.0%
GAACGTGGAGGAGCCAGAAG+TGG - chr4.3:26689680-26689699 MS.gene35487:CDS 60.0%
GATTCGTGACCCGAGACGTG+CGG - chr4.3:26689533-26689552 MS.gene35487:CDS 60.0%
GGCAGAGGCCATGGGGAAAA+TGG - chr4.3:26689502-26689521 MS.gene35487:CDS 60.0%
TTGATCGGAGGTGAGGGTGG+TGG + chr4.3:26689226-26689245 None:intergenic 60.0%
AAACGCGGTGGAGGTGGAGC+CGG + chr4.3:26689289-26689308 None:intergenic 65.0%
CGAGACGTGCGGTCCGTGTT+TGG - chr4.3:26689544-26689563 MS.gene35487:CDS 65.0%
CGTGCGGTCCGTGTTTGGCT+CGG - chr4.3:26689549-26689568 MS.gene35487:CDS 65.0%
GAGGAGTGAGGCAGAGGCCA+TGG - chr4.3:26689493-26689512 MS.gene35487:CDS 65.0%
GCTCGGGACCTTTACCACGG+CGG - chr4.3:26689566-26689585 MS.gene35487:CDS 65.0%
GGAGTGAGGCAGAGGCCATG+GGG - chr4.3:26689495-26689514 MS.gene35487:CDS 65.0%
GGTGGAGCCGGAGACTACGT+TGG + chr4.3:26689277-26689296 None:intergenic 65.0%
TCTGGCAGCTTCTTCCGCCG+TGG + chr4.3:26689583-26689602 None:intergenic 65.0%
! ATCGGAGGTGAGGGTGGTGG+TGG + chr4.3:26689223-26689242 None:intergenic 65.0%
! GTGCGGTCCGTGTTTGGCTC+GGG - chr4.3:26689550-26689569 MS.gene35487:CDS 65.0%
! TGAGCTTGGCTCTCGGCCCA+CGG + chr4.3:26689632-26689651 None:intergenic 65.0%
!! GGTGAGGGTGGTGGTGGAGA+AGG + chr4.3:26689217-26689236 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 26689168 26689899 26689168 ID=MS.gene35487
chr4.3 mRNA 26689168 26689899 26689168 ID=MS.gene35487.t1;Parent=MS.gene35487
chr4.3 exon 26689168 26689899 26689168 ID=MS.gene35487.t1.exon1;Parent=MS.gene35487.t1
chr4.3 CDS 26689168 26689899 26689168 ID=cds.MS.gene35487.t1;Parent=MS.gene35487.t1
Gene Sequence

>MS.gene35487

CGTTCCAAACTCACTCACAACAACAGAATTCTAAACATGAACTACGCCTTCTCCACCACCACCCTCACCTCCGATCAAGAATTCTCTGCCATCGTCGCTGCTCTAACCAACGTAGTCTCCGGCTCCACCTCCACCGCGTTTTCCATACCTGAATTTTGCCTCACGGATCACTCCACTGTCGGAAGCAGCAGTTTAGAACGAATAGTGCCGGAAGTGAACATGGTATCTTGCCGAGAATGCAACATAGCAGGATGCTTAGGATGCAATTTCTTCCCTGAAGAGAAAAAACAAAAACATAAACAAAAAAGAGCTAAGAAGAAGTACAGAGGAGTGAGGCAGAGGCCATGGGGAAAATGGGCTGCTGAGATTCGTGACCCGAGACGTGCGGTCCGTGTTTGGCTCGGGACCTTTACCACGGCGGAAGAAGCTGCCAGAGCTTACGACAATGCTGCTATCGAGTTCCGTGGGCCGAGAGCCAAGCTCAATTTTCCCGTCGTTGATGAATCGCTTAAGAACGTGGAGGAGCCAGAAGTGGTTGTCCCTTTGGAGGATATAAAGGACGAGAATATGAATCAAGAAATGCAAATTGAGACAAATATGGGATTTGGGAATAATAAGGATTGTGATTATTGGGATAGTATCGGAGAAGCTGATTTTCAACAACTAATGAGGTTTATGGATTTTGATAGAGATTCTTCTGACTCCAGAACATGGAACACTTTTAGTTCTTGA
Protein sequence

>MS.gene35487.t1

RSKLTHNNRILNMNYAFSTTTLTSDQEFSAIVAALTNVVSGSTSTAFSIPEFCLTDHSTVGSSSLERIVPEVNMVSCRECNIAGCLGCNFFPEEKKQKHKQKRAKKKYRGVRQRPWGKWAAEIRDPRRAVRVWLGTFTTAEEAARAYDNAAIEFRGPRAKLNFPVVDESLKNVEEPEVVVPLEDIKDENMNQEMQIETNMGFGNNKDCDYWDSIGEADFQQLMRFMDFDRDSSDSRTWNTFSS