AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene70576

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70576.t1 MTR_3g078700 91.166 566 22 2 1 565 1 539 0.0 1060
MS.gene70576.t1 MTR_3g078740 82.852 589 76 3 1 565 1 588 0.0 1023
MS.gene70576.t1 MTR_3g078730 81.770 565 76 1 1 565 1 538 0.0 943
MS.gene70576.t1 MTR_8g091390 49.818 550 269 5 17 564 26 570 0.0 561
MS.gene70576.t1 MTR_5g069680 33.511 564 321 20 4 545 6 537 7.61e-72 240
MS.gene70576.t1 MTR_7g058690 32.230 574 320 16 7 542 14 556 1.17e-71 240
MS.gene70576.t1 MTR_5g083360 30.465 581 331 18 1 544 1 545 5.56e-71 238
MS.gene70576.t1 MTR_5g081810 32.642 530 296 17 40 544 14 507 1.43e-70 236
MS.gene70576.t1 MTR_5g020620 31.634 569 327 19 1 544 8 539 3.15e-70 236
MS.gene70576.t1 MTR_7g060460 33.043 575 322 20 2 540 8 555 1.41e-69 234
MS.gene70576.t1 MTR_7g458880 31.937 573 325 17 4 540 11 554 9.66e-69 233
MS.gene70576.t1 MTR_5g020600 30.976 594 338 22 1 561 12 566 8.66e-68 229
MS.gene70576.t1 MTR_3g462760 33.272 541 316 16 22 545 23 535 1.41e-67 229
MS.gene70576.t1 MTR_7g062250 30.449 601 334 20 7 561 16 578 1.48e-67 229
MS.gene70576.t1 MTR_5g073210 31.373 561 328 18 9 541 4 535 9.30e-67 227
MS.gene70576.t1 MTR_2g008330 32.099 567 317 21 12 544 25 557 1.64e-65 224
MS.gene70576.t1 MTR_4g064530 33.031 551 299 22 25 540 44 559 2.12e-65 224
MS.gene70576.t1 MTR_3g101635 30.245 572 341 16 1 544 3 544 1.77e-62 215
MS.gene70576.t1 MTR_7g062310 30.660 561 338 14 21 553 43 580 2.43e-62 216
MS.gene70576.t1 MTR_8g027375 30.216 556 312 20 25 544 34 549 5.97e-60 209
MS.gene70576.t1 MTR_7g065980 29.066 578 339 21 7 544 3 549 1.98e-59 207
MS.gene70576.t1 MTR_4g064530 31.882 574 310 24 3 530 11 549 1.72e-58 204
MS.gene70576.t1 MTR_3g101640 30.189 583 334 23 1 544 1 549 2.13e-57 202
MS.gene70576.t1 MTR_3g071890 30.561 553 314 22 2 522 12 526 5.38e-57 201
MS.gene70576.t1 MTR_8g479390 28.007 557 335 16 25 565 31 537 1.15e-55 196
MS.gene70576.t1 MTR_4g049390 28.366 557 328 17 25 562 27 531 2.81e-55 195
MS.gene70576.t1 MTR_7g065970 28.098 573 324 23 18 544 18 548 3.98e-55 196
MS.gene70576.t1 MTR_4g132320 28.242 563 327 18 25 565 31 538 3.67e-54 192
MS.gene70576.t1 MTR_4g019225 28.546 557 331 16 24 544 25 550 6.73e-54 192
MS.gene70576.t1 MTR_3g115050 27.692 585 342 22 6 565 9 537 1.44e-53 191
MS.gene70576.t1 MTR_4g083190 26.976 582 361 20 1 562 1 538 3.47e-53 190
MS.gene70576.t1 MTR_4g048350 27.748 555 333 15 25 562 27 530 1.90e-52 187
MS.gene70576.t1 MTR_8g479380 27.341 534 316 18 48 562 52 532 6.65e-52 186
MS.gene70576.t1 MTR_5g018270 28.674 558 321 20 25 562 31 531 8.88e-52 186
MS.gene70576.t1 MTR_3g083440 27.778 576 349 21 7 562 8 536 6.33e-51 184
MS.gene70576.t1 MTR_3g083450 28.366 557 333 20 26 562 27 537 6.84e-51 184
MS.gene70576.t1 MTR_3g083390 28.007 582 340 23 7 562 8 536 8.57e-51 183
MS.gene70576.t1 MTR_3g008580 26.958 549 341 16 37 562 41 552 2.78e-50 182
MS.gene70576.t1 MTR_3g083400 27.778 576 349 21 7 562 8 536 4.86e-50 181
MS.gene70576.t1 MTR_1g026410 26.863 577 345 20 11 562 9 533 5.26e-50 181
MS.gene70576.t1 MTR_4g101650 27.837 564 337 18 27 562 29 550 6.67e-50 182
MS.gene70576.t1 MTR_3g083430 28.007 582 340 23 7 562 8 536 1.32e-49 180
MS.gene70576.t1 MTR_2g088080 27.305 564 325 19 25 562 30 534 1.40e-49 180
MS.gene70576.t1 MTR_1g090707 27.451 510 313 15 44 539 43 509 2.82e-49 180
MS.gene70576.t1 MTR_3g083410 28.224 535 318 21 48 562 12 500 7.44e-49 177
MS.gene70576.t1 MTR_4g075690 26.212 557 339 17 25 562 30 533 2.29e-48 176
MS.gene70576.t1 MTR_7g051440 26.560 561 347 19 26 562 30 549 2.62e-46 172
MS.gene70576.t1 MTR_4g083210 27.224 562 329 21 26 562 26 532 3.58e-45 167
MS.gene70576.t1 MTR_3g079660 75.556 90 22 0 476 565 5 94 3.33e-43 149
MS.gene70576.t1 MTR_2g088080 25.882 510 294 18 79 562 2 453 8.62e-38 145
MS.gene70576.t1 MTR_4g015120 33.559 295 165 9 7 296 9 277 5.40e-37 145
MS.gene70576.t1 MTR_4g015120 40.120 167 95 3 379 544 373 535 7.46e-29 121
MS.gene70576.t1 MTR_4g075690 25.957 470 282 15 25 480 30 447 5.80e-37 143
MS.gene70576.t1 MTR_2g009230 90.164 61 6 0 130 190 1 61 3.86e-33 121
MS.gene70576.t1 MTR_5g081790 30.640 297 170 10 251 524 137 420 3.99e-23 102
MS.gene70576.t1 MTR_5g081790 34.899 149 86 5 6 147 7 151 1.91e-18 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70576.t1 AT5G21105 66.786 560 182 2 9 564 19 578 0.0 800
MS.gene70576.t1 AT5G21100 63.587 552 193 5 17 564 16 563 0.0 738
MS.gene70576.t1 AT5G21105 65.720 528 177 2 1 524 11 538 0.0 737
MS.gene70576.t1 AT4G39830 48.866 573 270 9 7 564 16 580 0.0 572
MS.gene70576.t1 AT5G21105 67.109 377 123 1 189 564 11 387 0.0 549
MS.gene70576.t1 AT4G39830 49.084 491 229 8 87 564 3 485 2.14e-168 487
MS.gene70576.t1 AT4G39830 49.080 489 228 8 89 564 3 483 1.01e-167 485
MS.gene70576.t1 AT4G39830 47.047 491 226 9 87 564 3 472 4.78e-155 452
MS.gene70576.t1 AT5G05390 29.604 581 334 17 1 544 1 543 1.14e-70 237
MS.gene70576.t1 AT5G58910 32.310 554 305 20 24 544 29 545 7.10e-67 227
MS.gene70576.t1 AT5G03260 30.973 565 330 19 7 545 6 536 1.50e-66 226
MS.gene70576.t1 AT5G58910 32.491 554 303 21 24 544 29 544 7.24e-66 224
MS.gene70576.t1 AT5G07130 32.062 577 329 19 1 544 1 547 1.68e-65 224
MS.gene70576.t1 AT5G48100 31.459 569 314 22 14 544 11 541 2.55e-64 220
MS.gene70576.t1 AT2G30210 30.309 551 333 13 21 544 22 548 4.51e-64 220
MS.gene70576.t1 AT2G29130 32.689 569 327 20 1 540 6 547 5.42e-64 219
MS.gene70576.t1 AT2G40370 28.231 588 348 16 1 544 1 558 2.60e-63 218
MS.gene70576.t1 AT5G09360 30.729 576 327 19 1 544 12 547 5.00e-63 217
MS.gene70576.t1 AT2G46570 29.982 557 318 20 22 544 29 547 3.70e-62 214
MS.gene70576.t1 AT1G18140 30.159 567 323 17 20 544 24 559 1.61e-61 213
MS.gene70576.t1 AT5G01040 29.152 566 336 17 10 544 13 544 1.64e-61 213
MS.gene70576.t1 AT5G01050 29.174 569 334 18 10 544 13 546 2.65e-61 213
MS.gene70576.t1 AT2G38080 31.525 590 332 22 8 561 5 558 2.80e-61 212
MS.gene70576.t1 AT3G09220 29.381 565 335 18 12 544 13 545 3.05e-59 207
MS.gene70576.t1 AT1G55570 30.249 562 317 22 26 562 30 541 4.77e-58 203
MS.gene70576.t1 AT5G60020 30.329 577 337 19 1 540 3 551 5.22e-58 204
MS.gene70576.t1 AT5G01190 30.511 567 333 19 24 561 24 558 9.95e-58 202
MS.gene70576.t1 AT5G58910 31.227 538 293 21 40 544 8 501 4.91e-57 200
MS.gene70576.t1 AT5G01190 30.769 546 317 19 45 561 31 544 1.19e-55 196
MS.gene70576.t1 AT5G60020 30.483 538 311 17 40 540 8 519 1.11e-54 194
MS.gene70576.t1 AT4G22010 28.674 558 326 19 25 562 26 531 1.56e-53 191
MS.gene70576.t1 AT1G21860 27.972 572 337 17 16 565 16 534 1.86e-53 190
MS.gene70576.t1 AT3G13390 29.485 563 320 23 26 562 29 540 3.71e-53 190
MS.gene70576.t1 AT4G25240 29.472 587 346 22 4 563 7 552 8.34e-53 189
MS.gene70576.t1 AT4G25240 29.472 587 346 22 4 563 7 552 8.34e-53 189
MS.gene70576.t1 AT1G21850 27.682 578 350 18 4 562 3 531 1.21e-52 188
MS.gene70576.t1 AT4G12420 27.080 565 346 19 27 565 27 551 1.74e-52 189
MS.gene70576.t1 AT4G12420 27.080 565 346 19 27 565 27 551 1.74e-52 189
MS.gene70576.t1 AT5G51480 28.164 561 341 21 27 563 30 552 2.31e-52 188
MS.gene70576.t1 AT1G75790 27.243 602 335 21 4 562 1 542 3.48e-51 184
MS.gene70576.t1 AT5G60020 29.196 572 318 21 1 524 3 535 9.59e-51 183
MS.gene70576.t1 AT5G48450 25.907 579 361 17 9 562 8 543 2.78e-50 182
MS.gene70576.t1 AT5G48450 25.907 579 361 17 9 562 8 543 5.15e-50 182
MS.gene70576.t1 AT1G76160 26.235 587 351 19 5 565 4 534 7.20e-50 181
MS.gene70576.t1 AT5G66920 26.908 524 325 12 25 539 37 511 1.25e-49 180
MS.gene70576.t1 AT2G23630 26.944 553 336 16 27 562 37 538 3.40e-48 176
MS.gene70576.t1 AT2G46570 29.234 496 280 19 83 544 4 462 4.95e-48 174
MS.gene70576.t1 AT2G23630 26.944 553 336 16 27 562 32 533 5.33e-48 176
MS.gene70576.t1 AT5G07130 31.134 485 277 16 91 544 4 462 1.73e-47 173
MS.gene70576.t1 AT5G07130 31.134 485 277 16 91 544 4 462 1.73e-47 173
MS.gene70576.t1 AT4G28090 26.792 586 344 21 9 565 9 538 6.76e-47 172
MS.gene70576.t1 AT4G37160 25.859 553 343 16 27 562 33 535 6.79e-47 172
MS.gene70576.t1 AT1G41830 24.352 579 360 18 6 562 10 532 2.09e-46 171
MS.gene70576.t1 AT3G13400 26.523 558 342 22 26 562 28 538 6.20e-42 159
MS.gene70576.t1 AT3G13400 26.523 558 342 22 26 562 28 538 6.20e-42 159
MS.gene70576.t1 AT1G55560 26.354 554 346 19 27 562 28 537 4.34e-41 156
MS.gene70576.t1 AT3G09220 28.452 478 279 17 99 544 2 448 1.17e-40 154
MS.gene70576.t1 AT4G38420 24.735 566 349 18 25 565 30 543 5.73e-40 153
MS.gene70576.t1 AT4G37160 25.966 466 284 14 27 480 33 449 7.91e-36 140
MS.gene70576.t1 AT4G38420 24.405 504 309 16 25 508 30 481 7.75e-31 126
MS.gene70576.t1 AT4G38420 24.580 476 288 15 25 480 30 454 1.82e-29 121

Find 144 sgRNAs with CRISPR-Local

Find 384 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATCGGTAGTTTCACTAAA+TGG 0.163317 3.1:+64530662 MS.gene70576:CDS
TATTTCTATCATGGACATTT+TGG 0.179942 3.1:+64526269 MS.gene70576:CDS
CAAAATGCAAACCAGTTAAA+TGG 0.189861 3.1:+64530892 MS.gene70576:CDS
CCGTTACCGGTAGTTGTATT+TGG 0.192418 3.1:-64530826 None:intergenic
AAAACAAATCATTTCCAAAA+TGG 0.220018 3.1:+64530579 MS.gene70576:CDS
TTGGACTGCATTAAGGTTTA+AGG 0.221108 3.1:+64531068 MS.gene70576:CDS
CATATGGTTGGACTGCATTA+AGG 0.257525 3.1:+64531061 MS.gene70576:CDS
TGTTCCCTAGCAGCTAAATA+TGG 0.261114 3.1:+64528306 MS.gene70576:CDS
TGGCTGTGGAGTTCCCATTT+TGG 0.285078 3.1:-64530593 None:intergenic
GTAGTTGTATTTGGATTAAC+TGG 0.289880 3.1:-64530817 None:intergenic
TTTGTTTGGTGCATATGGTT+AGG 0.295869 3.1:+64525566 MS.gene70576:CDS
CTTTCAAATTGCATTGTTGT+AGG 0.308083 3.1:-64528338 None:intergenic
AGGCAGATAACCCTGGTGTT+TGG 0.311229 3.1:+64531088 MS.gene70576:CDS
CACTACCATTCCCATTTAAC+TGG 0.315490 3.1:-64530903 None:intergenic
GGCAGATAACCCTGGTGTTT+GGG 0.315629 3.1:+64531089 MS.gene70576:CDS
TGGCTTTCAATTGGTGTTAG+AGG 0.316278 3.1:+64530427 MS.gene70576:CDS
TTGGCTCCACATGAAGAATC+TGG 0.317779 3.1:-64528380 None:intergenic
AATGGCTCTCTTTGTTCCTT+TGG 0.323053 3.1:-64526338 None:intergenic
CATTGAACCACATTTGCATA+TGG 0.333948 3.1:+64531125 MS.gene70576:CDS
CTGAGGCTGTTCATAAAGTT+AGG 0.336809 3.1:+64531166 MS.gene70576:CDS
GGAATCAATGGCCAGTTTCC+AGG 0.342868 3.1:+64525683 MS.gene70576:CDS
TAGGGTCTTGGTCTGTTGTA+AGG 0.344364 3.1:-64530393 None:intergenic
CACCACCAGTCACACCCTTA+TGG 0.345496 3.1:+64530527 MS.gene70576:CDS
GTTCACCAATCCATCTCATT+GGG 0.346982 3.1:-64526445 None:intergenic
TAATAGTTGGGCCTGGAAAC+TGG 0.350475 3.1:-64525694 None:intergenic
TTGTTTGGTGCATATGGTTA+GGG 0.369163 3.1:+64525567 MS.gene70576:CDS
AAACGTGTAAACACCGTTAC+CGG 0.380846 3.1:-64530839 None:intergenic
TTAACTTCAGCTTTAATAGT+TGG 0.382060 3.1:-64525707 None:intergenic
TAACTTCAGCTTTAATAGTT+GGG 0.385140 3.1:-64525706 None:intergenic
CCACACTTAAGAGCTTCTTT+AGG 0.398032 3.1:-64531195 None:intergenic
CTGTATTGAAAAGTTTCTCC+TGG 0.402941 3.1:-64525968 None:intergenic
TTTGCAGTTTGGAACTCCTT+GGG 0.403133 3.1:+64525907 MS.gene70576:intron
ACAACATGCTCCACACAATC+TGG 0.411894 3.1:-64525656 None:intergenic
GTTAGGGCTTGTGGTGTGCC+TGG 0.412883 3.1:-64530457 None:intergenic
GTGTTCGGTATCGTTCCATA+AGG 0.413714 3.1:-64530542 None:intergenic
CTCAATACACAAAACAAAAT+CGG 0.415806 3.1:+64530646 MS.gene70576:CDS
GTGACTGGTGGTGGTAATGT+TGG 0.417838 3.1:-64530517 None:intergenic
AAACAAATCATTTCCAAAAT+GGG 0.418944 3.1:+64530580 MS.gene70576:CDS
TTTGGAACTCCTTGGGCTGA+TGG 0.420214 3.1:+64525914 MS.gene70576:CDS
ACTGCAGTTATATTTCCATA+TGG 0.422579 3.1:+64531045 MS.gene70576:CDS
TCCTTCTGTATGGAGCTTGT+TGG 0.424095 3.1:-64525753 None:intergenic
AATACAGATTCAAAGTTGAC+AGG 0.425137 3.1:+64525984 MS.gene70576:CDS
ATTTGACACGTGCACCTTTG+AGG 0.429330 3.1:+64531019 MS.gene70576:CDS
AACTCACCATCATAATGAAA+TGG 0.432896 3.1:-64526356 None:intergenic
CTTAATGCAGTCCAACCATA+TGG 0.434255 3.1:-64531060 None:intergenic
GGTTCACCAATCCATCTCAT+TGG 0.437708 3.1:-64526446 None:intergenic
AATTTGATTGATCCTAAGTA+AGG 0.437892 3.1:-64530721 None:intergenic
AATCGGTAGTTTCACTAAAT+GGG 0.438520 3.1:+64530663 MS.gene70576:CDS
TGTGAATGCTTTGCTGTGTT+CGG 0.443250 3.1:-64530557 None:intergenic
GTTTGCAGTTTGGAACTCCT+TGG 0.444823 3.1:+64525906 MS.gene70576:intron
TTAAGGATTGTTAGGGCTTG+TGG 0.446548 3.1:-64530466 None:intergenic
AAAATGCAAACCAGTTAAAT+GGG 0.447011 3.1:+64530893 MS.gene70576:CDS
CAAAGAGCAGCAGGGCTGTA+TGG 0.448009 3.1:+64526296 MS.gene70576:CDS
CAGTTATATTTCCATATGGT+TGG 0.450338 3.1:+64531049 MS.gene70576:CDS
AGAGAGCCATTTCATTATGA+TGG 0.456007 3.1:+64526350 MS.gene70576:CDS
TAGGAGAAAACTCACTGAAA+TGG 0.458974 3.1:-64528460 None:intergenic
TTGCCAACCACACCTTACTT+AGG 0.459014 3.1:+64530709 MS.gene70576:CDS
CAAATTGCATTGTTGTAGGT+TGG 0.462781 3.1:-64528334 None:intergenic
TGGCTCCACATGAAGAATCT+GGG 0.463007 3.1:-64528379 None:intergenic
GAATAACAGTTCCTTCTGTA+TGG 0.465247 3.1:-64525763 None:intergenic
TTAAATATGTCATAATCCAT+TGG 0.467428 3.1:-64530790 None:intergenic
ATTGAACCACATTTGCATAT+GGG 0.467926 3.1:+64531126 MS.gene70576:CDS
TTTGTAGTTAAGGATTGTTA+GGG 0.470399 3.1:-64530473 None:intergenic
TTTGGTATGCAAAGAGCAGC+AGG 0.470698 3.1:+64526287 MS.gene70576:CDS
CCTGGTACATATTTCTATCA+TGG 0.478578 3.1:+64526260 MS.gene70576:CDS
TAATCCATTGGAAATCTCTC+TGG 0.486255 3.1:-64530778 None:intergenic
GTTCCCTAGCAGCTAAATAT+GGG 0.491107 3.1:+64528307 MS.gene70576:CDS
CAATGGAATGCCCAAACACC+AGG 0.492231 3.1:-64531099 None:intergenic
TCAGCTTTAATAGTTGGGCC+TGG 0.499380 3.1:-64525701 None:intergenic
TGTGAGGATTTCGGTGGCTG+TGG 0.503552 3.1:-64530607 None:intergenic
GTCCTTGGCTTCTCTCAACT+TGG 0.506872 3.1:+64528437 MS.gene70576:CDS
TGTTCGGTATCGTTCCATAA+GGG 0.510120 3.1:-64530541 None:intergenic
GATTGCTAGTACTACGTCCT+TGG 0.510808 3.1:+64528422 MS.gene70576:CDS
TCAGAATCACAAACTTATTG+TGG 0.512257 3.1:+64530291 MS.gene70576:intron
CATAAGGGTGTGACTGGTGG+TGG 0.513495 3.1:-64530526 None:intergenic
ATCGTGCGGTGTGAGGATTT+CGG 0.515283 3.1:-64530616 None:intergenic
TCAGCCCCAATGAGATGGAT+TGG 0.516747 3.1:+64526440 MS.gene70576:CDS
GCTGTATGGTTCTCTAATAG+TGG 0.517469 3.1:+64526310 MS.gene70576:CDS
ACCACATTTGCATATGGGAA+TGG 0.518745 3.1:+64531131 MS.gene70576:CDS
ATTGGAAATCTCTCTGGTGG+TGG 0.520673 3.1:-64530772 None:intergenic
CTTATTGTGGTGGAAGCAGA+TGG 0.523378 3.1:+64530304 MS.gene70576:CDS
ATCTGCTCCTTAGTGATCTG+TGG 0.529687 3.1:+64526381 MS.gene70576:CDS
CCAAATACAACTACCGGTAA+CGG 0.532128 3.1:+64530826 MS.gene70576:CDS
TCTCTTCAGCCCCAATGAGA+TGG 0.532184 3.1:+64526435 MS.gene70576:CDS
CAGAAGGAACTGTTATTCAC+TGG 0.535040 3.1:+64525768 MS.gene70576:CDS
GTTAATCCAAATACAACTAC+CGG 0.535206 3.1:+64530820 MS.gene70576:CDS
TGCTCCCATATTTAGCTGCT+AGG 0.538328 3.1:-64528311 None:intergenic
TCTCAGTGTGCTATAAATCC+AGG 0.546219 3.1:+64525950 MS.gene70576:CDS
CTGTATGGAGCTTGTTGGTG+AGG 0.546569 3.1:-64525748 None:intergenic
TCGTTCCATAAGGGTGTGAC+TGG 0.548390 3.1:-64530532 None:intergenic
GCAAACCAGTTAAATGGGAA+TGG 0.548393 3.1:+64530898 MS.gene70576:CDS
GCTCCCATATTTAGCTGCTA+GGG 0.548844 3.1:-64528310 None:intergenic
CCACATTTGCATATGGGAAT+GGG 0.550546 3.1:+64531132 MS.gene70576:CDS
ACTAGCAATCCTTATTCTGT+AGG 0.552909 3.1:-64528409 None:intergenic
CCCATTCCCATATGCAAATG+TGG 0.553246 3.1:-64531132 None:intergenic
GGTGTTAGAGGCAGAAAACC+AGG 0.555537 3.1:+64530439 MS.gene70576:CDS
ATTCATCCATGGCATTTGCA+TGG 0.556495 3.1:+64530928 MS.gene70576:CDS
CATGTTGTGATGGGAATCAA+TGG 0.556686 3.1:+64525671 MS.gene70576:CDS
GGAACTGTTATTCACTGGCA+TGG 0.556886 3.1:+64525773 MS.gene70576:CDS
CTACAACAATGCAATTTGAA+AGG 0.558037 3.1:+64528339 MS.gene70576:CDS
TGTTGTAAGGAGTACTGAGT+AGG 0.563668 3.1:-64530380 None:intergenic
CCATGATAGAAATATGTACC+AGG 0.570980 3.1:-64526260 None:intergenic
CGATGTCATCAACTGCGAAT+GGG 0.572651 3.1:-64530339 None:intergenic
TTGTGTGGAGCATGTTGTGA+TGG 0.577399 3.1:+64525661 MS.gene70576:CDS
GATCCTAAGTAAGGTGTGGT+TGG 0.579576 3.1:-64530712 None:intergenic
GAATCACAAACTTATTGTGG+TGG 0.579698 3.1:+64530294 MS.gene70576:intron
GGCCAAGTTGAGAGAAGCCA+AGG 0.580752 3.1:-64528439 None:intergenic
ATCTCATTGGGGCTGAAGAG+AGG 0.581211 3.1:-64526433 None:intergenic
ACCACCAGAGAGATTTCCAA+TGG 0.581481 3.1:+64530774 MS.gene70576:CDS
TCTAATAGTGGATTTACCAA+AGG 0.582956 3.1:+64526322 MS.gene70576:CDS
GAGATGGATTGGTGAACCAC+AGG 0.584866 3.1:+64526451 MS.gene70576:CDS
TCGATGTCATCAACTGCGAA+TGG 0.586686 3.1:-64530340 None:intergenic
ATAACTGCAGTGTTCCTCAA+AGG 0.587942 3.1:-64531033 None:intergenic
TCACTGGCATGGAATCAGAC+AGG 0.589797 3.1:+64525784 MS.gene70576:CDS
CACAAGCTCACATGAACAAG+AGG 0.595059 3.1:+64526406 MS.gene70576:CDS
TTACACGTTTCAGTTGAATG+AGG 0.598282 3.1:+64530852 MS.gene70576:CDS
GAGGAGAATCGTGCGGTGTG+AGG 0.599110 3.1:-64530623 None:intergenic
TGTGTGGAGCATGTTGTGAT+GGG 0.602225 3.1:+64525662 MS.gene70576:CDS
TGCACCCCAGATTCTTCATG+TGG 0.602253 3.1:+64528374 MS.gene70576:CDS
GGCTCCACATGAAGAATCTG+GGG 0.602686 3.1:-64528378 None:intergenic
AGGTTTAAGGCAGATAACCC+TGG 0.609626 3.1:+64531081 MS.gene70576:CDS
CAACAATGCAATTTGAAAGG+TGG 0.612313 3.1:+64528342 MS.gene70576:CDS
TCATGTCCATGCAAATGCCA+TGG 0.613062 3.1:-64530934 None:intergenic
GATGACATCGACATCTACTC+AGG 0.614053 3.1:+64530352 MS.gene70576:CDS
ATACAGATTCAAAGTTGACA+GGG 0.614232 3.1:+64525985 MS.gene70576:CDS
TTGTGTGCCACAGATCACTA+AGG 0.616013 3.1:-64526388 None:intergenic
AGCTCACATGAACAAGAGGT+TGG 0.616753 3.1:+64526410 MS.gene70576:CDS
ACCAACAAGCTCCATACAGA+AGG 0.620491 3.1:+64525752 MS.gene70576:CDS
AGCTTGCTCATCAATGGACG+AGG 0.623207 3.1:+64528273 MS.gene70576:CDS
TTCCATAAGGGTGTGACTGG+TGG 0.624649 3.1:-64530529 None:intergenic
TCCATTGGAAATCTCTCTGG+TGG 0.626333 3.1:-64530775 None:intergenic
CCTAAAGAAGCTCTTAAGTG+TGG 0.626917 3.1:+64531195 MS.gene70576:CDS
ATGGTAGTGAAATTCATCCA+TGG 0.631220 3.1:+64530917 MS.gene70576:CDS
TTCACCAATCCATCTCATTG+GGG 0.642456 3.1:-64526444 None:intergenic
GCAGCAGTTCCATCAGCCCA+AGG 0.643166 3.1:-64525923 None:intergenic
TTGGTATGCAAAGAGCAGCA+GGG 0.660158 3.1:+64526288 MS.gene70576:CDS
AATGTGGTTCAATGTGACAA+TGG 0.664380 3.1:-64531116 None:intergenic
GATTGATCCTAAGTAAGGTG+TGG 0.679397 3.1:-64530716 None:intergenic
TGTTGGTGAGGTCAATGACA+AGG 0.689203 3.1:-64525736 None:intergenic
GTGCGGTGTGAGGATTTCGG+TGG 0.702906 3.1:-64530613 None:intergenic
AATGGAATGCCCAAACACCA+GGG 0.708938 3.1:-64531098 None:intergenic
GTTGGTGAGGTCAATGACAA+GGG 0.718919 3.1:-64525735 None:intergenic
GGTGAAGGGAGATTTAGACC+AGG 0.724991 3.1:+64530976 MS.gene70576:CDS
TATTGAGGAGGAGAATCGTG+CGG 0.763434 3.1:-64530630 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATAAAAATTGAAAATT+GGG + chr3.1:64527161-64527180 MS.gene70576:intron 10.0%
!! GATATTTAAAAAAGAATAAA+TGG - chr3.1:64529085-64529104 None:intergenic 10.0%
!! TACATATATATAATATTAAC+TGG + chr3.1:64526216-64526235 MS.gene70576:intron 10.0%
!! TAGAAATAAAAATTGAAAAT+TGG + chr3.1:64527160-64527179 MS.gene70576:intron 10.0%
!!! AAATTTTTCTACTTTTTTTT+TGG + chr3.1:64527849-64527868 MS.gene70576:intron 10.0%
!!! GTTTTATTAAAAATGTTATT+TGG - chr3.1:64530063-64530082 None:intergenic 10.0%
!!! TAAATATCATAGTTTTTTTT+TGG + chr3.1:64529097-64529116 MS.gene70576:intron 10.0%
!!! TTTATAGAATTATTTTTTGT+TGG - chr3.1:64529460-64529479 None:intergenic 10.0%
!! ACTATATTATCATTCATAAA+AGG - chr3.1:64528232-64528251 None:intergenic 15.0%
!! ATATTTAATTATAACTAGAC+TGG - chr3.1:64525851-64525870 None:intergenic 15.0%
!! CTTAAAAAAAAAATATGAAC+TGG + chr3.1:64527823-64527842 MS.gene70576:intron 15.0%
!! GTTTAATATATAAAGATAGT+GGG - chr3.1:64527397-64527416 None:intergenic 15.0%
!! TATATAATATAATTAGAGCT+AGG + chr3.1:64526193-64526212 MS.gene70576:intron 15.0%
!! TATATATAATATTAACTGGT+TGG + chr3.1:64526220-64526239 MS.gene70576:intron 15.0%
!! TGTTTAATATATAAAGATAG+TGG - chr3.1:64527398-64527417 None:intergenic 15.0%
!! TTGTCTTGATTAAAATTTAA+AGG - chr3.1:64527972-64527991 None:intergenic 15.0%
!!! AAAAAAACTTTAACTTCAAT+AGG + chr3.1:64529055-64529074 MS.gene70576:intron 15.0%
!!! AGTATTATTTTTCATTCTTT+TGG + chr3.1:64528090-64528109 MS.gene70576:intron 15.0%
!!! TATTTTGCATATCATTATTA+GGG + chr3.1:64528599-64528618 MS.gene70576:intron 15.0%
!!! TTGAAAAAATGTTTTAGATA+TGG + chr3.1:64528910-64528929 MS.gene70576:intron 15.0%
!!! TTTAATAAAAGTACCTATTA+AGG + chr3.1:64527310-64527329 MS.gene70576:intron 15.0%
!!! TTTATTACTTTTTTAAACGT+GGG + chr3.1:64527511-64527530 MS.gene70576:intron 15.0%
!!! TTTTAAAGCATAATAACTTT+TGG + chr3.1:64526926-64526945 MS.gene70576:intron 15.0%
!!! TTTTATTACTTTTTTAAACG+TGG + chr3.1:64527510-64527529 MS.gene70576:intron 15.0%
!! AAAAAAAAAATTGACAAGTG+GGG - chr3.1:64527760-64527779 None:intergenic 20.0%
!! AAAACAAATCATTTCCAAAA+TGG + chr3.1:64530579-64530598 MS.gene70576:CDS 20.0%
!! AAACAAATCATTTCCAAAAT+GGG + chr3.1:64530580-64530599 MS.gene70576:CDS 20.0%
!! AACATATATCATATATGTAG+TGG - chr3.1:64528494-64528513 None:intergenic 20.0%
!! AACTTCACGTTAAATTATTT+AGG + chr3.1:64529895-64529914 MS.gene70576:intron 20.0%
!! AATTGTAAGTTAATATGAAC+TGG + chr3.1:64527921-64527940 MS.gene70576:intron 20.0%
!! ACATATATCATATATGTAGT+GGG - chr3.1:64528493-64528512 None:intergenic 20.0%
!! ACATCATATTCATATGAAAA+AGG - chr3.1:64527079-64527098 None:intergenic 20.0%
!! ATACATTCAAATAAATGAAG+CGG + chr3.1:64529432-64529451 MS.gene70576:intron 20.0%
!! ATCGTAGGAATTAAAAATTA+AGG + chr3.1:64528982-64529001 MS.gene70576:intron 20.0%
!! CGAATTAAATATTGTTTCAT+TGG + chr3.1:64529852-64529871 MS.gene70576:intron 20.0%
!! GAAAAAAAAAATTGACAAGT+GGG - chr3.1:64527761-64527780 None:intergenic 20.0%
!! GAAAACGAATGAAATAATTT+AGG + chr3.1:64528814-64528833 MS.gene70576:intron 20.0%
!! GAAAAGTTGAATTTAAATCT+TGG + chr3.1:64529917-64529936 MS.gene70576:intron 20.0%
!! TGAAAAAAAAAATTGACAAG+TGG - chr3.1:64527762-64527781 None:intergenic 20.0%
!! TGAAATAATGAATCAATCTA+TGG - chr3.1:64530238-64530257 None:intergenic 20.0%
!! TGTTCAATTAGTTGTTATAT+TGG + chr3.1:64529278-64529297 MS.gene70576:intron 20.0%
!! TTAAATATGTCATAATCCAT+TGG - chr3.1:64530793-64530812 None:intergenic 20.0%
!! TTAAATATTGTTTCATTGGT+TGG + chr3.1:64529856-64529875 MS.gene70576:intron 20.0%
!! TTCATCATTATCACATTTAA+AGG - chr3.1:64529507-64529526 None:intergenic 20.0%
!!! ATATCATAGTTTTTTTTTGG+TGG + chr3.1:64529100-64529119 MS.gene70576:intron 20.0%
!!! CAATTGATTCCTTTTTTATT+TGG - chr3.1:64528731-64528750 None:intergenic 20.0%
!!! CATTTAGATTTAGAATATCT+TGG - chr3.1:64530120-64530139 None:intergenic 20.0%
!!! CTATTTTGCATATCATTATT+AGG + chr3.1:64528598-64528617 MS.gene70576:intron 20.0%
!!! TATTACTCATTTTTACAAGT+GGG + chr3.1:64527431-64527450 MS.gene70576:intron 20.0%
!!! TTAAATGTGATAATGATGAA+CGG + chr3.1:64529507-64529526 MS.gene70576:intron 20.0%
! AAAATGCAAACCAGTTAAAT+GGG + chr3.1:64530893-64530912 MS.gene70576:CDS 25.0%
! AAGACAATAGAAATATGAAC+TGG + chr3.1:64527796-64527815 MS.gene70576:intron 25.0%
! AATCAATTGTCGACATAATA+AGG + chr3.1:64528742-64528761 MS.gene70576:intron 25.0%
! AATTAGTTGTTATATTGGAG+GGG + chr3.1:64529283-64529302 MS.gene70576:intron 25.0%
! AATTGAGATGAGCATATATT+TGG - chr3.1:64528648-64528667 None:intergenic 25.0%
! AATTTGATTGATCCTAAGTA+AGG - chr3.1:64530724-64530743 None:intergenic 25.0%
! AGTGTAAAAGTTTCTTTACA+AGG - chr3.1:64526651-64526670 None:intergenic 25.0%
! AGTTGAATTTAAATCTTGGT+TGG + chr3.1:64529921-64529940 MS.gene70576:intron 25.0%
! ATAAAGCCAAATGTTAGTAT+AGG + chr3.1:64529252-64529271 MS.gene70576:intron 25.0%
! ATTATTAGGTATTAGGTGAA+TGG - chr3.1:64527208-64527227 None:intergenic 25.0%
! CAATTAGTTGTTATATTGGA+GGG + chr3.1:64529282-64529301 MS.gene70576:intron 25.0%
! CTCAATACACAAAACAAAAT+CGG + chr3.1:64530646-64530665 MS.gene70576:CDS 25.0%
! CTGAAACAAACAGAAATTAT+GGG - chr3.1:64530275-64530294 None:intergenic 25.0%
! CTTAGGAATTATTAGGTATT+AGG - chr3.1:64527215-64527234 None:intergenic 25.0%
! GACAATGCATAATATATACA+AGG - chr3.1:64529144-64529163 None:intergenic 25.0%
! GAGATTAATAGTCTAATTCA+TGG + chr3.1:64528792-64528811 MS.gene70576:intron 25.0%
! GTAAGAAAAACTTCACTAAT+AGG + chr3.1:64528863-64528882 MS.gene70576:intron 25.0%
! GTAATAAAATGTGTACTACT+TGG - chr3.1:64527458-64527477 None:intergenic 25.0%
! TACTATTCCATTATCTTTCT+TGG - chr3.1:64528074-64528093 None:intergenic 25.0%
! TATTACTTCTTTATGCAAGT+GGG + chr3.1:64527472-64527491 MS.gene70576:intron 25.0%
! TCAATTAGTTGTTATATTGG+AGG + chr3.1:64529281-64529300 MS.gene70576:intron 25.0%
! TGAAACAAACAGAAATTATG+GGG - chr3.1:64530274-64530293 None:intergenic 25.0%
! TGAAATAATTTAGGAACAGT+AGG + chr3.1:64528823-64528842 MS.gene70576:intron 25.0%
! TGAATTAGACTATTAATCTC+CGG - chr3.1:64528792-64528811 None:intergenic 25.0%
! TGCATAATATATACAAGGTT+CGG - chr3.1:64529139-64529158 None:intergenic 25.0%
! TTATTACTTCTTTATGCAAG+TGG + chr3.1:64527471-64527490 MS.gene70576:intron 25.0%
! TTATTAGGTATTAGGTGAAT+GGG - chr3.1:64527207-64527226 None:intergenic 25.0%
! TTTGTAGTTAAGGATTGTTA+GGG - chr3.1:64530476-64530495 None:intergenic 25.0%
!! CTTTCAAGAATTTTATTGTC+TGG - chr3.1:64527116-64527135 None:intergenic 25.0%
!! TAACTTCAGCTTTAATAGTT+GGG - chr3.1:64525709-64525728 None:intergenic 25.0%
!! TCGTTGGAATTTTTCTATAA+TGG + chr3.1:64527714-64527733 MS.gene70576:intron 25.0%
!! TCTGAAACAAACAGAAATTA+TGG - chr3.1:64530276-64530295 None:intergenic 25.0%
!! TCTTTTGGTAAATGTACAAT+TGG + chr3.1:64528105-64528124 MS.gene70576:intron 25.0%
!! TTAACTTCAGCTTTAATAGT+TGG - chr3.1:64525710-64525729 None:intergenic 25.0%
!! TTTTGTAGTTAAGGATTGTT+AGG - chr3.1:64530477-64530496 None:intergenic 25.0%
!!! AAAGCCAGTAGTTTTTTTTA+GGG - chr3.1:64530414-64530433 None:intergenic 25.0%
!!! AGTTTTAAAGTTGTCATGAT+CGG + chr3.1:64526768-64526787 MS.gene70576:intron 25.0%
!!! CTATTACTCATTTTTACAAG+TGG + chr3.1:64527430-64527449 MS.gene70576:intron 25.0%
!!! TATTTCTATCATGGACATTT+TGG + chr3.1:64526269-64526288 MS.gene70576:CDS 25.0%
!!! TCACAAATAAAGAGTATCAT+TGG - chr3.1:64527029-64527048 None:intergenic 25.0%
!!! TCTTTTCCTTATTTTATACG+AGG - chr3.1:64529635-64529654 None:intergenic 25.0%
!!! TGATTCCTTTTTTATTTGGT+GGG - chr3.1:64528727-64528746 None:intergenic 25.0%
!!! TTACTTTTAAGAGGAAATTC+CGG + chr3.1:64528770-64528789 MS.gene70576:intron 25.0%
!!! TTGATTCCTTTTTTATTTGG+TGG - chr3.1:64528728-64528747 None:intergenic 25.0%
AAATCGGTAGTTTCACTAAA+TGG + chr3.1:64530662-64530681 MS.gene70576:CDS 30.0%
AACAAAAGAAAAACCATTGC+TGG - chr3.1:64526133-64526152 None:intergenic 30.0%
AACTCACCATCATAATGAAA+TGG - chr3.1:64526359-64526378 None:intergenic 30.0%
AAGACCCTAAAAAAAACTAC+TGG + chr3.1:64530407-64530426 MS.gene70576:CDS 30.0%
AATACAGATTCAAAGTTGAC+AGG + chr3.1:64525984-64526003 MS.gene70576:CDS 30.0%
AATCGGTAGTTTCACTAAAT+GGG + chr3.1:64530663-64530682 MS.gene70576:CDS 30.0%
AATCTAAATGCATGATGCTT+TGG + chr3.1:64530130-64530149 MS.gene70576:intron 30.0%
AATCTGACTATCCAATTATG+GGG + chr3.1:64529962-64529981 MS.gene70576:intron 30.0%
AATTAATCAACATGTAGCAG+TGG - chr3.1:64526071-64526090 None:intergenic 30.0%
AATTGTCGACATAATAAGGA+AGG + chr3.1:64528746-64528765 MS.gene70576:intron 30.0%
ACAATCTGACTATCCAATTA+TGG + chr3.1:64529960-64529979 MS.gene70576:intron 30.0%
ACATCTCCTATACTAACATT+TGG - chr3.1:64529261-64529280 None:intergenic 30.0%
ACTGCAGTTATATTTCCATA+TGG + chr3.1:64531045-64531064 MS.gene70576:CDS 30.0%
ATACAGATTCAAAGTTGACA+GGG + chr3.1:64525985-64526004 MS.gene70576:CDS 30.0%
ATAGACACACACAAACTAAT+TGG - chr3.1:64528582-64528601 None:intergenic 30.0%
ATCTAAATGCATGATGCTTT+GGG + chr3.1:64530131-64530150 MS.gene70576:intron 30.0%
ATTAGTTGTTATATTGGAGG+GGG + chr3.1:64529284-64529303 MS.gene70576:intron 30.0%
ATTGAACCACATTTGCATAT+GGG + chr3.1:64531126-64531145 MS.gene70576:CDS 30.0%
CAAAAAAGACCTACAGAATA+AGG + chr3.1:64528400-64528419 MS.gene70576:CDS 30.0%
CAAAATGCAAACCAGTTAAA+TGG + chr3.1:64530892-64530911 MS.gene70576:CDS 30.0%
CAACGATGATTTGATGAAAT+GGG - chr3.1:64527700-64527719 None:intergenic 30.0%
CAATCTGACTATCCAATTAT+GGG + chr3.1:64529961-64529980 MS.gene70576:intron 30.0%
CAGTTATATTTCCATATGGT+TGG + chr3.1:64531049-64531068 MS.gene70576:CDS 30.0%
CATCTCAATTATCACCATTT+AGG + chr3.1:64528658-64528677 MS.gene70576:intron 30.0%
CATGCATGTATGATAAAATG+GGG - chr3.1:64529780-64529799 None:intergenic 30.0%
CTACAACAATGCAATTTGAA+AGG + chr3.1:64528339-64528358 MS.gene70576:CDS 30.0%
CTATTTAAGGAGTCTTTGTT+AGG - chr3.1:64527258-64527277 None:intergenic 30.0%
CTGTAAAAATGTTTGCAGTT+TGG + chr3.1:64525896-64525915 MS.gene70576:intron 30.0%
CTTTCAAATTGCATTGTTGT+AGG - chr3.1:64528341-64528360 None:intergenic 30.0%
GCATAATATATACAAGGTTC+GGG - chr3.1:64529138-64529157 None:intergenic 30.0%
GCATGCATGTATGATAAAAT+GGG - chr3.1:64529781-64529800 None:intergenic 30.0%
GCCAAATTTATGTCTATAGA+GGG + chr3.1:64529728-64529747 MS.gene70576:intron 30.0%
GTAGTTGTATTTGGATTAAC+TGG - chr3.1:64530820-64530839 None:intergenic 30.0%
GTTAATCCAAATACAACTAC+CGG + chr3.1:64530820-64530839 MS.gene70576:CDS 30.0%
TAAATGAGATGCATAGTGAT+TGG + chr3.1:64529664-64529683 MS.gene70576:intron 30.0%
TCAGAATCACAAACTTATTG+TGG + chr3.1:64530291-64530310 MS.gene70576:intron 30.0%
TCCCTCTATAGACATAAATT+TGG - chr3.1:64529732-64529751 None:intergenic 30.0%
TGCAATTCAAGGAATGATAT+GGG - chr3.1:64530215-64530234 None:intergenic 30.0%
TGCATGCATGTATGATAAAA+TGG - chr3.1:64529782-64529801 None:intergenic 30.0%
TGCCAAATTTATGTCTATAG+AGG + chr3.1:64529727-64529746 MS.gene70576:intron 30.0%
TTATAACTAGACTGGTACTT+TGG - chr3.1:64525843-64525862 None:intergenic 30.0%
TTGTTCCCACCAAATAAAAA+AGG + chr3.1:64528719-64528738 MS.gene70576:intron 30.0%
! AAAAGTTGAAAGTATACCTG+TGG - chr3.1:64526470-64526489 None:intergenic 30.0%
! AATTGTCGCATCAATTGTTT+TGG + chr3.1:64529342-64529361 MS.gene70576:intron 30.0%
! ATTTGCATGGACATGATTTT+TGG + chr3.1:64530941-64530960 MS.gene70576:CDS 30.0%
! TTTGCATGGACATGATTTTT+GGG + chr3.1:64530942-64530961 MS.gene70576:CDS 30.0%
!! AAAAACTACTGGCTTTCAAT+TGG + chr3.1:64530418-64530437 MS.gene70576:CDS 30.0%
!! AAGGAAGGTTTACTTTTAAG+AGG + chr3.1:64528761-64528780 MS.gene70576:intron 30.0%
!! AGGTAAATTCTTAGTTCTAG+TGG + chr3.1:64525804-64525823 MS.gene70576:intron 30.0%
!! CAGAGATTGTTTTGTAGTTA+AGG - chr3.1:64530486-64530505 None:intergenic 30.0%
!! TAACTGGTTGGTGTTAAATA+TGG + chr3.1:64526232-64526251 MS.gene70576:intron 30.0%
!! TCTAATAGTGGATTTACCAA+AGG + chr3.1:64526322-64526341 MS.gene70576:CDS 30.0%
!!! AGCTTTATTTTGACGCAAAA+AGG + chr3.1:64528140-64528159 MS.gene70576:intron 30.0%
!!! AGTAGTTTTTTTTAGGGTCT+TGG - chr3.1:64530408-64530427 None:intergenic 30.0%
!!! CGATTTTGTTTTGTGTATTG+AGG - chr3.1:64530648-64530667 None:intergenic 30.0%
!!! CTTATTCTGTAGGTCTTTTT+TGG - chr3.1:64528402-64528421 None:intergenic 30.0%
!!! GAAAGCCAGTAGTTTTTTTT+AGG - chr3.1:64530415-64530434 None:intergenic 30.0%
!!! GCAATTCTGATTGTTTTGAT+TGG + chr3.1:64529387-64529406 MS.gene70576:intron 30.0%
!!! GCTTTATTTTGACGCAAAAA+GGG + chr3.1:64528141-64528160 MS.gene70576:intron 30.0%
!!! TTTTGTTTTGTGTATTGAGG+AGG - chr3.1:64530645-64530664 None:intergenic 30.0%
!!! TTTTTTATTTGGTGGGAACA+AGG - chr3.1:64528720-64528739 None:intergenic 30.0%
AAAAAATTGACAAGTGGGGA+TGG - chr3.1:64527756-64527775 None:intergenic 35.0%
AAACCACTTGAAAAAGACGA+AGG + chr3.1:64529594-64529613 MS.gene70576:intron 35.0%
AAAGAACGGGCAACTATATA+AGG - chr3.1:64527566-64527585 None:intergenic 35.0%
AAATAAGTGATGTGTCACGT+GGG - chr3.1:64527283-64527302 None:intergenic 35.0%
AATGTGGTTCAATGTGACAA+TGG - chr3.1:64531119-64531138 None:intergenic 35.0%
ACTAGCAATCCTTATTCTGT+AGG - chr3.1:64528412-64528431 None:intergenic 35.0%
AGAGAGCCATTTCATTATGA+TGG + chr3.1:64526350-64526369 MS.gene70576:CDS 35.0%
AGATTTGAATCACATGAGTG+GGG + chr3.1:64529530-64529549 MS.gene70576:intron 35.0%
ATACAAAAAGCCAGATTGTG+TGG + chr3.1:64525646-64525665 MS.gene70576:CDS 35.0%
CAAATTGCATTGTTGTAGGT+TGG - chr3.1:64528337-64528356 None:intergenic 35.0%
CAACAATGCAATTTGAAAGG+TGG + chr3.1:64528342-64528361 MS.gene70576:CDS 35.0%
CACTAATAGGTCAAAGAAGT+TGG + chr3.1:64528876-64528895 MS.gene70576:intron 35.0%
CATGTTGATCTAACAAACCA+TGG - chr3.1:64530017-64530036 None:intergenic 35.0%
CATTGAACCACATTTGCATA+TGG + chr3.1:64531125-64531144 MS.gene70576:CDS 35.0%
CCAACGATGATTTGATGAAA+TGG - chr3.1:64527701-64527720 None:intergenic 35.0%
CCAATGACAATACACTAACA+AGG + chr3.1:64527344-64527363 MS.gene70576:intron 35.0%
CCATGATAGAAATATGTACC+AGG - chr3.1:64526263-64526282 None:intergenic 35.0%
CCATTTCATCAAATCATCGT+TGG + chr3.1:64527698-64527717 MS.gene70576:intron 35.0%
CCTTGTTAGTGTATTGTCAT+TGG - chr3.1:64527347-64527366 None:intergenic 35.0%
CTACGATTCTGCACATTAAA+CGG - chr3.1:64528969-64528988 None:intergenic 35.0%
CTGTATTGAAAAGTTTCTCC+TGG - chr3.1:64525971-64525990 None:intergenic 35.0%
GAAATGCAATAATCAGCAGT+AGG - chr3.1:64530192-64530211 None:intergenic 35.0%
GAATAACAGTTCCTTCTGTA+TGG - chr3.1:64525766-64525785 None:intergenic 35.0%
GAATCACAAACTTATTGTGG+TGG + chr3.1:64530294-64530313 MS.gene70576:intron 35.0%
GACAGTACCAAGAAAGATAA+TGG + chr3.1:64528064-64528083 MS.gene70576:intron 35.0%
GAGATTTGAATCACATGAGT+GGG + chr3.1:64529529-64529548 MS.gene70576:intron 35.0%
GATGAGCATATATTTGGATG+TGG - chr3.1:64528642-64528661 None:intergenic 35.0%
GCAATTCAAGGAATGATATG+GGG - chr3.1:64530214-64530233 None:intergenic 35.0%
GGATGCTCTTAGGAATTATT+AGG - chr3.1:64527222-64527241 None:intergenic 35.0%
GTGCAATTCAAGGAATGATA+TGG - chr3.1:64530216-64530235 None:intergenic 35.0%
TAAATAAGTGATGTGTCACG+TGG - chr3.1:64527284-64527303 None:intergenic 35.0%
TAATCCATTGGAAATCTCTC+TGG - chr3.1:64530781-64530800 None:intergenic 35.0%
TAGGAGAAAACTCACTGAAA+TGG - chr3.1:64528463-64528482 None:intergenic 35.0%
TATAGTTGCCCGTTCTTTAA+CGG + chr3.1:64527568-64527587 MS.gene70576:intron 35.0%
TCAATCTATGGTGCAATTCA+AGG - chr3.1:64530226-64530245 None:intergenic 35.0%
TGGAGTCCTCGTATAAAATA+AGG + chr3.1:64529626-64529645 MS.gene70576:intron 35.0%
TTACACGTTTCAGTTGAATG+AGG + chr3.1:64530852-64530871 MS.gene70576:CDS 35.0%
TTATGAGACAGCTACCTAAA+TGG - chr3.1:64528675-64528694 None:intergenic 35.0%
TTGGACTGCATTAAGGTTTA+AGG + chr3.1:64531068-64531087 MS.gene70576:CDS 35.0%
TTGTTAGGAAACTACCATTG+TGG - chr3.1:64527243-64527262 None:intergenic 35.0%
! AAACTTTTCTCATCAACACC+TGG - chr3.1:64530997-64531016 None:intergenic 35.0%
! AATTTTTCTTCCTCCAATGG+AGG + chr3.1:64527597-64527616 MS.gene70576:intron 35.0%
! ATGGTAGTGAAATTCATCCA+TGG + chr3.1:64530917-64530936 MS.gene70576:CDS 35.0%
! ATTTTTCTTCCTCCAATGGA+GGG + chr3.1:64527598-64527617 MS.gene70576:intron 35.0%
! CCTGGTACATATTTCTATCA+TGG + chr3.1:64526260-64526279 MS.gene70576:CDS 35.0%
! CTCAATTTTTCTTCCTCCAA+TGG + chr3.1:64527594-64527613 MS.gene70576:intron 35.0%
! TGCTCAAAGCAGTTTTTGTT+TGG + chr3.1:64525552-64525571 MS.gene70576:CDS 35.0%
! TGGTAATGTTGGAAAAACTG+AGG - chr3.1:64530509-64530528 None:intergenic 35.0%
!! TTGTTTGGTGCATATGGTTA+GGG + chr3.1:64525567-64525586 MS.gene70576:CDS 35.0%
!! TTTGTTTGGTGCATATGGTT+AGG + chr3.1:64525566-64525585 MS.gene70576:CDS 35.0%
!!! AATGGGTGTTATTTTTGCTG+AGG + chr3.1:64531149-64531168 MS.gene70576:CDS 35.0%
!!! ATAGTTTTTTTTTGGTGGCC+AGG + chr3.1:64529105-64529124 MS.gene70576:intron 35.0%
!!! CAGTTTTTGTTTGGTGCATA+TGG + chr3.1:64525561-64525580 MS.gene70576:CDS 35.0%
!!! GATTTTTGGGTTTTGGGATA+TGG + chr3.1:64530955-64530974 MS.gene70576:CDS 35.0%
!!! GGACATGATTTTTGGGTTTT+GGG + chr3.1:64530949-64530968 MS.gene70576:CDS 35.0%
!!! TAGTTTTTTTTTGGTGGCCA+GGG + chr3.1:64529106-64529125 MS.gene70576:intron 35.0%
!!! TGGACATGATTTTTGGGTTT+TGG + chr3.1:64530948-64530967 MS.gene70576:CDS 35.0%
!!! TTCGTCTTTTTCAAGTGGTT+TGG - chr3.1:64529595-64529614 None:intergenic 35.0%
!!! TTTTAGAGCTTGCTCATCAA+TGG + chr3.1:64528267-64528286 MS.gene70576:intron 35.0%
AAAATAAAGCTAACACCGCG+TGG - chr3.1:64528131-64528150 None:intergenic 40.0%
AAACGTGTAAACACCGTTAC+CGG - chr3.1:64530842-64530861 None:intergenic 40.0%
AAGAAAAACCATTGCTGGCA+TGG - chr3.1:64526128-64526147 None:intergenic 40.0%
AAGCACTAATGCTCATATGG+TGG - chr3.1:64527055-64527074 None:intergenic 40.0%
AATAAGTGATGTGTCACGTG+GGG - chr3.1:64527282-64527301 None:intergenic 40.0%
AATGGCTCTCTTTGTTCCTT+TGG - chr3.1:64526341-64526360 None:intergenic 40.0%
ACCACATTTGCATATGGGAA+TGG + chr3.1:64531131-64531150 MS.gene70576:CDS 40.0%
AGCAGTGGAAACAGAAAAAG+AGG - chr3.1:64526056-64526075 None:intergenic 40.0%
ATAACTGCAGTGTTCCTCAA+AGG - chr3.1:64531036-64531055 None:intergenic 40.0%
ATAGTTGCCCGTTCTTTAAC+GGG + chr3.1:64527569-64527588 MS.gene70576:intron 40.0%
ATATATGTCCATGCCAGCAA+TGG + chr3.1:64526117-64526136 MS.gene70576:intron 40.0%
ATTCATCCATGGCATTTGCA+TGG + chr3.1:64530928-64530947 MS.gene70576:CDS 40.0%
ATTGAGTCCCCGTTAAAGAA+CGG - chr3.1:64527580-64527599 None:intergenic 40.0%
CACTACCATTCCCATTTAAC+TGG - chr3.1:64530906-64530925 None:intergenic 40.0%
CAGAAGGAACTGTTATTCAC+TGG + chr3.1:64525768-64525787 MS.gene70576:CDS 40.0%
CATATGGTTGGACTGCATTA+AGG + chr3.1:64531061-64531080 MS.gene70576:CDS 40.0%
CCAAATACAACTACCGGTAA+CGG + chr3.1:64530826-64530845 MS.gene70576:CDS 40.0%
CCACACTTAAGAGCTTCTTT+AGG - chr3.1:64531198-64531217 None:intergenic 40.0%
CCACATTTGCATATGGGAAT+GGG + chr3.1:64531132-64531151 MS.gene70576:CDS 40.0%
CCTAAAGAAGCTCTTAAGTG+TGG + chr3.1:64531195-64531214 MS.gene70576:CDS 40.0%
CGTTTAATGTGCAGAATCGT+AGG + chr3.1:64528967-64528986 MS.gene70576:intron 40.0%
CTGAGGCTGTTCATAAAGTT+AGG + chr3.1:64531166-64531185 MS.gene70576:CDS 40.0%
CTTAATGCAGTCCAACCATA+TGG - chr3.1:64531063-64531082 None:intergenic 40.0%
GAAAACAACTCACACTCATG+TGG + chr3.1:64527135-64527154 MS.gene70576:intron 40.0%
GATTGATCCTAAGTAAGGTG+TGG - chr3.1:64530719-64530738 None:intergenic 40.0%
GCAAACCAGTTAAATGGGAA+TGG + chr3.1:64530898-64530917 MS.gene70576:CDS 40.0%
GCATAGAAAACCTTGCAACT+AGG + chr3.1:64527671-64527690 MS.gene70576:intron 40.0%
GCTGTATGGTTCTCTAATAG+TGG + chr3.1:64526310-64526329 MS.gene70576:CDS 40.0%
GGAGATTTGAATCACATGAG+TGG + chr3.1:64529528-64529547 MS.gene70576:intron 40.0%
GGAGTCATTGAGTCCTTAAT+AGG - chr3.1:64527326-64527345 None:intergenic 40.0%
GTTCACCAATCCATCTCATT+GGG - chr3.1:64526448-64526467 None:intergenic 40.0%
GTTCCCTAGCAGCTAAATAT+GGG + chr3.1:64528307-64528326 MS.gene70576:CDS 40.0%
TAAATGTACAATTGGCCACG+CGG + chr3.1:64528113-64528132 MS.gene70576:intron 40.0%
TAGAAAACCTTGCAACTAGG+TGG + chr3.1:64527674-64527693 MS.gene70576:intron 40.0%
TATGGGGACCAAATTGGATT+GGG + chr3.1:64529978-64529997 MS.gene70576:intron 40.0%
TCCAATTATGGGGACCAAAT+TGG + chr3.1:64529972-64529991 MS.gene70576:intron 40.0%
TCCAATTTGGTCCCCATAAT+TGG - chr3.1:64529976-64529995 None:intergenic 40.0%
TCTCAGTGTGCTATAAATCC+AGG + chr3.1:64525950-64525969 MS.gene70576:CDS 40.0%
TGAGATGCATAGTGATTGGT+CGG + chr3.1:64529668-64529687 MS.gene70576:intron 40.0%
TGTTCCCTAGCAGCTAAATA+TGG + chr3.1:64528306-64528325 MS.gene70576:CDS 40.0%
TGTTCGGTATCGTTCCATAA+GGG - chr3.1:64530544-64530563 None:intergenic 40.0%
TTAAGGATTGTTAGGGCTTG+TGG - chr3.1:64530469-64530488 None:intergenic 40.0%
TTATGGGGACCAAATTGGAT+TGG + chr3.1:64529977-64529996 MS.gene70576:intron 40.0%
TTCACCAATCCATCTCATTG+GGG - chr3.1:64526447-64526466 None:intergenic 40.0%
! ACTGTTAGAGCATCTCCAAT+GGG - chr3.1:64527650-64527669 None:intergenic 40.0%
! ATCACATTTTTGACCCCAAG+TGG + chr3.1:64526093-64526112 MS.gene70576:intron 40.0%
! ATGGACATATATGCCACTTG+GGG - chr3.1:64526109-64526128 None:intergenic 40.0%
! CATGGACATATATGCCACTT+GGG - chr3.1:64526110-64526129 None:intergenic 40.0%
! CATGTTGTGATGGGAATCAA+TGG + chr3.1:64525671-64525690 MS.gene70576:CDS 40.0%
! TGTGAATGCTTTGCTGTGTT+CGG - chr3.1:64530560-64530579 None:intergenic 40.0%
! TTTGCAGTTTGGAACTCCTT+GGG + chr3.1:64525907-64525926 MS.gene70576:intron 40.0%
!! ATATGTAGTGGGTCATAGCT+AGG - chr3.1:64528482-64528501 None:intergenic 40.0%
!! ATTCCTAAGAGCATCCACAA+TGG + chr3.1:64527226-64527245 MS.gene70576:intron 40.0%
!! GGAAAGCACTAATGCTCATA+TGG - chr3.1:64527058-64527077 None:intergenic 40.0%
!! TGGCTTTCAATTGGTGTTAG+AGG + chr3.1:64530427-64530446 MS.gene70576:CDS 40.0%
!! TGTTGTAAGGAGTACTGAGT+AGG - chr3.1:64530383-64530402 None:intergenic 40.0%
AAAGACGAAGGACCACGTTA+TGG + chr3.1:64529606-64529625 MS.gene70576:intron 45.0%
AATGGAATGCCCAAACACCA+GGG - chr3.1:64531101-64531120 None:intergenic 45.0%
ACAACATGCTCCACACAATC+TGG - chr3.1:64525659-64525678 None:intergenic 45.0%
ACCAACAAGCTCCATACAGA+AGG + chr3.1:64525752-64525771 MS.gene70576:CDS 45.0%
ACCACCAGAGAGATTTCCAA+TGG + chr3.1:64530774-64530793 MS.gene70576:CDS 45.0%
AGCTCACATGAACAAGAGGT+TGG + chr3.1:64526410-64526429 MS.gene70576:CDS 45.0%
ATCTGCTCCTTAGTGATCTG+TGG + chr3.1:64526381-64526400 MS.gene70576:CDS 45.0%
ATTGGAAATCTCTCTGGTGG+TGG - chr3.1:64530775-64530794 None:intergenic 45.0%
ATTTGACACGTGCACCTTTG+AGG + chr3.1:64531019-64531038 MS.gene70576:CDS 45.0%
CACAAGCTCACATGAACAAG+AGG + chr3.1:64526406-64526425 MS.gene70576:CDS 45.0%
CATTAAACGGCTACTTGAGC+TGG - chr3.1:64528956-64528975 None:intergenic 45.0%
CATTGGAGATGCTCTAACAG+TGG + chr3.1:64527649-64527668 MS.gene70576:intron 45.0%
CCCATTCCCATATGCAAATG+TGG - chr3.1:64531135-64531154 None:intergenic 45.0%
CCGTTACCGGTAGTTGTATT+TGG - chr3.1:64530829-64530848 None:intergenic 45.0%
CGATGTCATCAACTGCGAAT+GGG - chr3.1:64530342-64530361 None:intergenic 45.0%
CTACCATTGTGGATGCTCTT+AGG - chr3.1:64527232-64527251 None:intergenic 45.0%
GATCCTAAGTAAGGTGTGGT+TGG - chr3.1:64530715-64530734 None:intergenic 45.0%
GATGACATCGACATCTACTC+AGG + chr3.1:64530352-64530371 MS.gene70576:CDS 45.0%
GATTGCTAGTACTACGTCCT+TGG + chr3.1:64528422-64528441 MS.gene70576:CDS 45.0%
GCATGGACATATATGCCACT+TGG - chr3.1:64526111-64526130 None:intergenic 45.0%
GCTCCCATATTTAGCTGCTA+GGG - chr3.1:64528313-64528332 None:intergenic 45.0%
GGAACTGTTATTCACTGGCA+TGG + chr3.1:64525773-64525792 MS.gene70576:CDS 45.0%
GGTTCACCAATCCATCTCAT+TGG - chr3.1:64526449-64526468 None:intergenic 45.0%
GTGTTAAATATGGTGCAGCC+TGG + chr3.1:64526242-64526261 MS.gene70576:intron 45.0%
GTGTTCGGTATCGTTCCATA+AGG - chr3.1:64530545-64530564 None:intergenic 45.0%
TAATAGTTGGGCCTGGAAAC+TGG - chr3.1:64525697-64525716 None:intergenic 45.0%
TAGAGGGAATCACATCTTGC+AGG + chr3.1:64529744-64529763 MS.gene70576:intron 45.0%
TAGGGTCTTGGTCTGTTGTA+AGG - chr3.1:64530396-64530415 None:intergenic 45.0%
TAGTTGCCCGTTCTTTAACG+GGG + chr3.1:64527570-64527589 MS.gene70576:intron 45.0%
TATACGAGGACTCCATAACG+TGG - chr3.1:64529621-64529640 None:intergenic 45.0%
TATTGAGGAGGAGAATCGTG+CGG - chr3.1:64530633-64530652 None:intergenic 45.0%
TCATGTCCATGCAAATGCCA+TGG - chr3.1:64530937-64530956 None:intergenic 45.0%
TCCATTGGAAATCTCTCTGG+TGG - chr3.1:64530778-64530797 None:intergenic 45.0%
TCCTTCTGTATGGAGCTTGT+TGG - chr3.1:64525756-64525775 None:intergenic 45.0%
TCGATGTCATCAACTGCGAA+TGG - chr3.1:64530343-64530362 None:intergenic 45.0%
TCTCTCTCCTGGGTAACTAA+CGG - chr3.1:64527539-64527558 None:intergenic 45.0%
TGAGCACACCCAATCCAATT+TGG - chr3.1:64529989-64530008 None:intergenic 45.0%
TGCTCCCATATTTAGCTGCT+AGG - chr3.1:64528314-64528333 None:intergenic 45.0%
TGGCTCCACATGAAGAATCT+GGG - chr3.1:64528382-64528401 None:intergenic 45.0%
TGTCACGTGGGGTCTATTTA+AGG - chr3.1:64527271-64527290 None:intergenic 45.0%
TGTGTGGAGCATGTTGTGAT+GGG + chr3.1:64525662-64525681 MS.gene70576:CDS 45.0%
TTAGTTACCCAGGAGAGAGA+GGG + chr3.1:64527539-64527558 MS.gene70576:intron 45.0%
TTGAGTCCCCGTTAAAGAAC+GGG - chr3.1:64527579-64527598 None:intergenic 45.0%
TTGCCAACCACACCTTACTT+AGG + chr3.1:64530709-64530728 MS.gene70576:CDS 45.0%
TTGGCTCCACATGAAGAATC+TGG - chr3.1:64528383-64528402 None:intergenic 45.0%
TTGGTATGCAAAGAGCAGCA+GGG + chr3.1:64526288-64526307 MS.gene70576:CDS 45.0%
TTGTGTGCCACAGATCACTA+AGG - chr3.1:64526391-64526410 None:intergenic 45.0%
TTGTGTGGAGCATGTTGTGA+TGG + chr3.1:64525661-64525680 MS.gene70576:CDS 45.0%
TTTGGTATGCAAAGAGCAGC+AGG + chr3.1:64526287-64526306 MS.gene70576:CDS 45.0%
! AGGTTTAAGGCAGATAACCC+TGG + chr3.1:64531081-64531100 MS.gene70576:CDS 45.0%
! CACTGTTAGAGCATCTCCAA+TGG - chr3.1:64527651-64527670 None:intergenic 45.0%
! CTGTTAGAGCATCTCCAATG+GGG - chr3.1:64527649-64527668 None:intergenic 45.0%
! CTTATTGTGGTGGAAGCAGA+TGG + chr3.1:64530304-64530323 MS.gene70576:CDS 45.0%
! GTTGGTGAGGTCAATGACAA+GGG - chr3.1:64525738-64525757 None:intergenic 45.0%
! GTTTGCAGTTTGGAACTCCT+TGG + chr3.1:64525906-64525925 MS.gene70576:intron 45.0%
! TCAGCTTTAATAGTTGGGCC+TGG - chr3.1:64525704-64525723 None:intergenic 45.0%
! TGTTGGTGAGGTCAATGACA+AGG - chr3.1:64525739-64525758 None:intergenic 45.0%
!!! GGGTTTTGGGATATGGTGAA+GGG + chr3.1:64530962-64530981 MS.gene70576:CDS 45.0%
!!! GGTCCTTCGTCTTTTTCAAG+TGG - chr3.1:64529600-64529619 None:intergenic 45.0%
!!! TGGGTTTTGGGATATGGTGA+AGG + chr3.1:64530961-64530980 MS.gene70576:CDS 45.0%
!! AAATTTCAAAAATAAAATAA+AGG + chr3.1:64527993-64528012 MS.gene70576:intron 5.0%
!! TTAAAAATCATTAATTAATA+TGG + chr3.1:64529365-64529384 MS.gene70576:intron 5.0%
!! TTAAAATTATAATTTAATCA+TGG + chr3.1:64528042-64528061 MS.gene70576:intron 5.0%
AAATGGGCCACCTAGTTGCA+AGG - chr3.1:64527684-64527703 None:intergenic 50.0%
AGGCAGATAACCCTGGTGTT+TGG + chr3.1:64531088-64531107 MS.gene70576:CDS 50.0%
ATAAGGACCCTCTCTCTCCT+GGG - chr3.1:64527549-64527568 None:intergenic 50.0%
ATCGTGCGGTGTGAGGATTT+CGG - chr3.1:64530619-64530638 None:intergenic 50.0%
ATCTCATTGGGGCTGAAGAG+AGG - chr3.1:64526436-64526455 None:intergenic 50.0%
CAATGGAATGCCCAAACACC+AGG - chr3.1:64531102-64531121 None:intergenic 50.0%
CCAACTGAGCTTAACTCACG+AGG + chr3.1:64529168-64529187 MS.gene70576:intron 50.0%
CCAATGGAGGGTCCTTAACA+GGG + chr3.1:64527610-64527629 MS.gene70576:intron 50.0%
CCTCGTGAGTTAAGCTCAGT+TGG - chr3.1:64529171-64529190 None:intergenic 50.0%
CCTTAACAGGGAGTGGTCTA+AGG + chr3.1:64527622-64527641 MS.gene70576:intron 50.0%
CCTTAGACCACTCCCTGTTA+AGG - chr3.1:64527625-64527644 None:intergenic 50.0%
CTCTCTCCTGGGTAACTAAC+GGG - chr3.1:64527538-64527557 None:intergenic 50.0%
GGAATCAATGGCCAGTTTCC+AGG + chr3.1:64525683-64525702 MS.gene70576:CDS 50.0%
GGAGTTGGCATGTGAAACAC+TGG + chr3.1:64529689-64529708 MS.gene70576:intron 50.0%
GGCAGATAACCCTGGTGTTT+GGG + chr3.1:64531089-64531108 MS.gene70576:CDS 50.0%
GGCTCCACATGAAGAATCTG+GGG - chr3.1:64528381-64528400 None:intergenic 50.0%
GGTGAAGGGAGATTTAGACC+AGG + chr3.1:64530976-64530995 MS.gene70576:CDS 50.0%
GGTGTTAGAGGCAGAAAACC+AGG + chr3.1:64530439-64530458 MS.gene70576:CDS 50.0%
GTCCTTGGCTTCTCTCAACT+TGG + chr3.1:64528437-64528456 MS.gene70576:CDS 50.0%
GTTAGTTACCCAGGAGAGAG+AGG + chr3.1:64527538-64527557 MS.gene70576:intron 50.0%
TATAAGGACCCTCTCTCTCC+TGG - chr3.1:64527550-64527569 None:intergenic 50.0%
TCACTGGCATGGAATCAGAC+AGG + chr3.1:64525784-64525803 MS.gene70576:CDS 50.0%
TCAGCCCCAATGAGATGGAT+TGG + chr3.1:64526440-64526459 MS.gene70576:CDS 50.0%
TCCAATGGAGGGTCCTTAAC+AGG + chr3.1:64527609-64527628 MS.gene70576:intron 50.0%
TCTCTTCAGCCCCAATGAGA+TGG + chr3.1:64526435-64526454 MS.gene70576:CDS 50.0%
TGCACCCCAGATTCTTCATG+TGG + chr3.1:64528374-64528393 MS.gene70576:CDS 50.0%
TGTTAAGGACCCTCCATTGG+AGG - chr3.1:64527610-64527629 None:intergenic 50.0%
! AGCTTGCTCATCAATGGACG+AGG + chr3.1:64528273-64528292 MS.gene70576:CDS 50.0%
! GCATAGTGATTGGTCGGAGT+TGG + chr3.1:64529674-64529693 MS.gene70576:intron 50.0%
! TCGTTCCATAAGGGTGTGAC+TGG - chr3.1:64530535-64530554 None:intergenic 50.0%
! TGGCTGTGGAGTTCCCATTT+TGG - chr3.1:64530596-64530615 None:intergenic 50.0%
! TTCCATAAGGGTGTGACTGG+TGG - chr3.1:64530532-64530551 None:intergenic 50.0%
! TTTGGAACTCCTTGGGCTGA+TGG + chr3.1:64525914-64525933 MS.gene70576:CDS 50.0%
!! CTGTATGGAGCTTGTTGGTG+AGG - chr3.1:64525751-64525770 None:intergenic 50.0%
!! GAGATGGATTGGTGAACCAC+AGG + chr3.1:64526451-64526470 MS.gene70576:CDS 50.0%
!! GTGACTGGTGGTGGTAATGT+TGG - chr3.1:64530520-64530539 None:intergenic 50.0%
CAAAGAGCAGCAGGGCTGTA+TGG + chr3.1:64526296-64526315 MS.gene70576:CDS 55.0%
CACCACCAGTCACACCCTTA+TGG + chr3.1:64530527-64530546 MS.gene70576:CDS 55.0%
CCCTGTTAAGGACCCTCCAT+TGG - chr3.1:64527613-64527632 None:intergenic 55.0%
GAGTGGTCTAAGGACCCCAT+TGG + chr3.1:64527632-64527651 MS.gene70576:intron 55.0%
TGTGAGGATTTCGGTGGCTG+TGG - chr3.1:64530610-64530629 None:intergenic 55.0%
! CATAAGGGTGTGACTGGTGG+TGG - chr3.1:64530529-64530548 None:intergenic 55.0%
! GGCCAAGTTGAGAGAAGCCA+AGG - chr3.1:64528442-64528461 None:intergenic 55.0%
! TGGGTGTGCTCAAAGCACCA+TGG + chr3.1:64529997-64530016 MS.gene70576:intron 55.0%
GAGGAGAATCGTGCGGTGTG+AGG - chr3.1:64530626-64530645 None:intergenic 60.0%
GCAGCAGTTCCATCAGCCCA+AGG - chr3.1:64525926-64525945 None:intergenic 60.0%
GGAGGGTCCTTAACAGGGAG+TGG + chr3.1:64527615-64527634 MS.gene70576:intron 60.0%
GTGCGGTGTGAGGATTTCGG+TGG - chr3.1:64530616-64530635 None:intergenic 60.0%
GTGGGACCCGTTAGTTACCC+AGG + chr3.1:64527529-64527548 MS.gene70576:intron 60.0%
GTTAGGGCTTGTGGTGTGCC+TGG - chr3.1:64530460-64530479 None:intergenic 60.0%
! CAAGGTTCGGGTTCGAACCC+TGG - chr3.1:64529126-64529145 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 64525545 64531230 64525545 ID=MS.gene70576
chr3.1 mRNA 64525545 64531230 64525545 ID=MS.gene70576.t1;Parent=MS.gene70576
chr3.1 exon 64525545 64525805 64525545 ID=MS.gene70576.t1.exon1;Parent=MS.gene70576.t1
chr3.1 CDS 64525545 64525805 64525545 ID=cds.MS.gene70576.t1;Parent=MS.gene70576.t1
chr3.1 exon 64525914 64526006 64525914 ID=MS.gene70576.t1.exon2;Parent=MS.gene70576.t1
chr3.1 CDS 64525914 64526006 64525914 ID=cds.MS.gene70576.t1;Parent=MS.gene70576.t1
chr3.1 exon 64526260 64526472 64526260 ID=MS.gene70576.t1.exon3;Parent=MS.gene70576.t1
chr3.1 CDS 64526260 64526472 64526260 ID=cds.MS.gene70576.t1;Parent=MS.gene70576.t1
chr3.1 exon 64528273 64528467 64528273 ID=MS.gene70576.t1.exon4;Parent=MS.gene70576.t1
chr3.1 CDS 64528273 64528467 64528273 ID=cds.MS.gene70576.t1;Parent=MS.gene70576.t1
chr3.1 exon 64530295 64531230 64530295 ID=MS.gene70576.t1.exon5;Parent=MS.gene70576.t1
chr3.1 CDS 64530295 64531230 64530295 ID=cds.MS.gene70576.t1;Parent=MS.gene70576.t1
Gene Sequence

>MS.gene70576

ATGAGTTTGCTCAAAGCAGTTTTTGTTTGGTGCATATGGTTAGGGTTATTTGAGTTATCATTAGCAAAAGTGAGACACTACAAGTTTGATGTTGAATACATATACAAAAAGCCAGATTGTGTGGAGCATGTTGTGATGGGAATCAATGGCCAGTTTCCAGGCCCAACTATTAAAGCTGAAGTTAATGACACCCTTGTCATTGACCTCACCAACAAGCTCCATACAGAAGGAACTGTTATTCACTGGCATGGAATCAGACAGGTAAATTCTTAGTTCTAGTGGTTTTGATCATGAACCAAAGTACCAGTCTAGTTATAATTAAATATTACATTAATTCTTTGTTGTTAATTACTGTAAAAATGTTTGCAGTTTGGAACTCCTTGGGCTGATGGAACTGCTGCAATCTCTCAGTGTGCTATAAATCCAGGAGAAACTTTTCAATACAGATTCAAAGTTGACAGGGTAATTAATTATTAATTAATTAAAATTTTAGTTCTCTGTTCTATGACCTCTTTTTCTGTTTCCACTGCTACATGTTGATTAATTTGATCACATTTTTGACCCCAAGTGGCATATATGTCCATGCCAGCAATGGTTTTTCTTTTGTTTTTTTGATTACATATTTTATTTTATTTTATTTTATAATACTATATAATATAATTAGAGCTAGGTACATATATATAATATTAACTGGTTGGTGTTAAATATGGTGCAGCCTGGTACATATTTCTATCATGGACATTTTGGTATGCAAAGAGCAGCAGGGCTGTATGGTTCTCTAATAGTGGATTTACCAAAGGAACAAAGAGAGCCATTTCATTATGATGGTGAGTTTAATCTGCTCCTTAGTGATCTGTGGCACACAAGCTCACATGAACAAGAGGTTGGCCTCTCTTCAGCCCCAATGAGATGGATTGGTGAACCACAGGTATACTTTCAACTTTTCATATATACAAAAATATCATGATCATTCAATTTTTATTTATTTTATTTTATCAAATATTAAAAACAGCTATGTGTACAATAAACGTTTTTACGTAAAAAAATAATAAAAATTTAAAATAATAATAAAAATATAATATAATTTAACTCGTATACATTGTCCTTGTAAAGAAACTTTTACACTTTCAATCAATAACAATCGTTAGATCTTTAAAAATGTTTGACATTTCTCATTCTTGCATAAGTTATGCTTGAATGTGTTTTTTCTTGTACTCTTAACTAGTTTTAAAGTTGTCATGATCGGTTGAATGTGTAAAACTTCTTAAACTAACATTGAACAAAAATTGAACTCTTAAAATAACTTACTCGTTATACATCTTTAATTTCTTCATTGTAAAATGTTACTTATAAAAAATAAAATTATTTGATATCTAGAACATTTTAAAGCATAATAACTTTTGGCTTATGAATATGATTACGCTAAAGAATTTCATAACTAATTAACATAAGACTTCTTCTCACTATACTTTTCATCATCACCAATGATACTCTTTATTTGTGACATCCACCATATGAGCATTAGTGCTTTCCTTTTTCATATGAATATGATGTCTTTGATCTGTAAACCAGACAATAAAATTCTTGAAAGAAAACAACTCACACTCATGTGGCATAGAAATAAAAATTGAAAATTGGGAAAGAATAAAGAGTCATATTCCCATTCACCTAATACCTAATAATTCCTAAGAGCATCCACAATGGTAGTTTCCTAACAAAGACTCCTTAAATAGACCCCACGTGACACATCACTTATTTATGATTTTTTAATAAAAGTACCTATTAAGGACTCAATGACTCCAATGACAATACACTAACAAGGACTTCAATGAAAAGTACTTAAATATGTCCCACTATCTTTATATATTAAACAAAAATAATTTATCTATTACTCATTTTTACAAGTGGGACCAAGTAGTACACATTTTATTACTTCTTTATGCAAGTGGGACCAAGTAGTACACATTTTATTACTTTTTTAAACGTGGGACCCGTTAGTTACCCAGGAGAGAGAGGGTCCTTATATAGTTGCCCGTTCTTTAACGGGGACTCAATTTTTCTTCCTCCAATGGAGGGTCCTTAACAGGGAGTGGTCTAAGGACCCCATTGGAGATGCTCTAACAGTGGCATAGAAAACCTTGCAACTAGGTGGCCCATTTCATCAAATCATCGTTGGAATTTTTCTATAATGGTGAATTCTCGCAGTTGCCATCCCCACTTGTCAATTTTTTTTTTCAACAACACATCTTTCAAGACAATAGAAATATGAACTGGTATTCTTAAAAAAAAAATATGAACTGGTACAAATTTTTCTACTTTTTTTTTGGACAAATTTTTCTACTTGTATTATATTATTTTATCTTTTTTTTATAAAAAAATTGTAAGTTAATATGAACTGGTACAAATTTTTTCTTCTTATTTTATCCTTTAAATTTTAATCAAGACAAAAAATTTCAAAAATAAAATAAAGGAAAGCATCGTATTACAGTATAAATATTTAAAATTATAATTTAATCATGGACAGTACCAAGAAAGATAATGGAATAGTATTATTTTTCATTCTTTTGGTAAATGTACAATTGGCCACGCGGTGTTAGCTTTATTTTGACGCAAAAAGGGAAAGACAATCAGAAGAAACGAACAAAAGAAACAGTGTATTTTTCTTAAAATAATTGCATGCGTAACCTTTTATGAATGATAATATAGTATTTGTTTATTTGTTTTTTAGAGCTTGCTCATCAATGGACGAGGACAGTTCAATTGTTCCCTAGCAGCTAAATATGGGAGCACCAACCTACAACAATGCAATTTGAAAGGTGGTGAAGAATGTGCACCCCAGATTCTTCATGTGGAGCCAAAAAAGACCTACAGAATAAGGATTGCTAGTACTACGTCCTTGGCTTCTCTCAACTTGGCCATTTCAGTGAGTTTTCTCCTAGCTATGACCCACTACATATATGATATATGTTTGCATTATTTCAATATATATATCGTTGTATTTCTTTCTTATTAATTTATATTATTCTGTCATATTCCAATTAGTTTGTGTGTGTCTATTTTGCATATCATTATTAGGGTTATATCATTATTGCTTCCACATCCAAATATATGCTCATCTCAATTATCACCATTTAGGTAGCTGTCTCATAATTAAGATAGTAGTACTTCATTTCCTTGTTCCCACCAAATAAAAAAGGAATCAATTGTCGACATAATAAGGAAGGTTTACTTTTAAGAGGAAATTCCGGAGATTAATAGTCTAATTCATGGAAAACGAATGAAATAATTTAGGAACAGTAGGTGTGTGTTTAAAGCAGCGTAAGAAAAACTTCACTAATAGGTCAAAGAAGTTGGAAAAAATATCTTTGAAAAAATGTTTTAGATATGGAAATCTACGACTTCGTGTGTCCAGCTCAAGTAGCCGTTTAATGTGCAGAATCGTAGGAATTAAAAATTAAGGTTTTGCGTGTCTTAAAACACATGTTAAATTTTACTTCAATACTTTGTAAGAAAAAAACTTTAACTTCAATAGGAACTCCATTTATTCTTTTTTAAATATCATAGTTTTTTTTTGGTGGCCAGGGTTCGAACCCGAACCTTGTATATATTATGCATTGTCATTACCAACTGAGCTTAACTCACGAGGACTAAATATTGTAGTTTGACTATTTTACATTATTCATATCTTATTTTAATGATATTATTTTATAAAGCCAAATGTTAGTATAGGAGATGTTCAATTAGTTGTTATATTGGAGGGGGATTCTGATTGATGTACAAATGTTATAAACACTCAGAATTGTCGCATCAATTGTTTTGGTTAAAAATCATTAATTAATATGGCAATTCTGATTGTTTTGATTGGTTGTATTTAAAAAAACAAACATATACATTCAAATAAATGAAGCGGTACCAACAAAAAATAATTCTATAAAGCTGAAAAAACACTAGTCAATTAACCTTTAAATGTGATAATGATGAACGGAGATTTGAATCACATGAGTGGGGATTAGTGAGTTGTCAAACGTGCGACAAAAAATAGTAGATCCAAACCACTTGAAAAAGACGAAGGACCACGTTATGGAGTCCTCGTATAAAATAAGGAAAAGAAAACAACGTTAAATGAGATGCATAGTGATTGGTCGGAGTTGGCATGTGAAACACTGGTTTCTTGATAACTAGTGCCAAATTTATGTCTATAGAGGGAATCACATCTTGCAGGAATGAAATCTCCCCATTTTATCATACATGCATGCACTTTCATTCAAATCAACAACTGTATTACATAAGTGTACAAAATTCAAATTCGAATTAAATATTGTTTCATTGGTTGGACTCAATTGATTCATGAACTTCACGTTAAATTATTTAGGAAAAGTTGAATTTAAATCTTGGTTGGTTGTTAGATTTTACTTACAATCTGACTATCCAATTATGGGGACCAAATTGGATTGGGTGTGCTCAAAGCACCATGGTTTGTTAGATCAACATGAGACAATATGTTTTTCAACTTTACCAAATAACATTTTTAATAAAACTTAAAATAGTGATTGTTTGATCTTGATCTAACGACCAAGATATTCTAAATCTAAATGCATGATGCTTTGGGAGTAGTCACTGATTTTGATAAATTTTCACATAAAACCTACTGCTGATTATTGCATTTCCCCATATCATTCCTTGAATTGCACCATAGATTGATTCATTATTTCATGAAATAACATTGCCCCATAATTTCTGTTTGTTTCAGAATCACAAACTTATTGTGGTGGAAGCAGATGGAAACTACGTGCACCCATTCGCAGTTGATGACATCGACATCTACTCAGGTGAAACCTACTCAGTACTCCTTACAACAGACCAAGACCCTAAAAAAAACTACTGGCTTTCAATTGGTGTTAGAGGCAGAAAACCAGGCACACCACAAGCCCTAACAATCCTTAACTACAAAACAATCTCTGCCTCAGTTTTTCCAACATTACCACCACCAGTCACACCCTTATGGAACGATACCGAACACAGCAAAGCATTCACAAAACAAATCATTTCCAAAATGGGAACTCCACAGCCACCGAAATCCTCACACCGCACGATTCTCCTCCTCAATACACAAAACAAAATCGGTAGTTTCACTAAATGGGCTATTAACAATGTTTCATTAACATTGCCAACCACACCTTACTTAGGATCAATCAAATTTAAGCTAAACAATACATTTGATAGAAATCCACCACCAGAGAGATTTCCAATGGATTATGACATATTTAAAAATCCAGTTAATCCAAATACAACTACCGGTAACGGTGTTTACACGTTTCAGTTGAATGAGGTTGTTGATGTGATACTACAAAATGCAAACCAGTTAAATGGGAATGGTAGTGAAATTCATCCATGGCATTTGCATGGACATGATTTTTGGGTTTTGGGATATGGTGAAGGGAGATTTAGACCAGGTGTTGATGAGAAAAGTTTCAATTTGACACGTGCACCTTTGAGGAACACTGCAGTTATATTTCCATATGGTTGGACTGCATTAAGGTTTAAGGCAGATAACCCTGGTGTTTGGGCATTCCATTGTCACATTGAACCACATTTGCATATGGGAATGGGTGTTATTTTTGCTGAGGCTGTTCATAAAGTTAGGAACATACCTAAAGAAGCTCTTAAGTGTGGTGCTACAGCCTAG
Protein sequence

>MS.gene70576.t1

MSLLKAVFVWCIWLGLFELSLAKVRHYKFDVEYIYKKPDCVEHVVMGINGQFPGPTIKAEVNDTLVIDLTNKLHTEGTVIHWHGIRQFGTPWADGTAAISQCAINPGETFQYRFKVDRPGTYFYHGHFGMQRAAGLYGSLIVDLPKEQREPFHYDGEFNLLLSDLWHTSSHEQEVGLSSAPMRWIGEPQSLLINGRGQFNCSLAAKYGSTNLQQCNLKGGEECAPQILHVEPKKTYRIRIASTTSLASLNLAISNHKLIVVEADGNYVHPFAVDDIDIYSGETYSVLLTTDQDPKKNYWLSIGVRGRKPGTPQALTILNYKTISASVFPTLPPPVTPLWNDTEHSKAFTKQIISKMGTPQPPKSSHRTILLLNTQNKIGSFTKWAINNVSLTLPTTPYLGSIKFKLNNTFDRNPPPERFPMDYDIFKNPVNPNTTTGNGVYTFQLNEVVDVILQNANQLNGNGSEIHPWHLHGHDFWVLGYGEGRFRPGVDEKSFNLTRAPLRNTAVIFPYGWTALRFKADNPGVWAFHCHIEPHLHMGMGVIFAEAVHKVRNIPKEALKCGATA