Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054153.t1 | KEH40452.1 | 96.9 | 557 | 17 | 0 | 9 | 565 | 71 | 627 | 0.00E+00 | 1163.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054153.t1 | Q8W4A7 | 75.5 | 523 | 125 | 3 | 23 | 542 | 74 | 596 | 1.3e-251 | 870.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054153.t1 | A0A072VF97 | 96.9 | 557 | 17 | 0 | 9 | 565 | 71 | 627 | 0.0e+00 | 1163.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene30980 | MS.gene054153 | PPI |
| MS.gene06426 | MS.gene054153 | PPI |
| MS.gene049302 | MS.gene054153 | PPI |
| MS.gene013329 | MS.gene054153 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054153.t1 | MTR_1g029130 | 96.948 | 557 | 17 | 0 | 9 | 565 | 71 | 627 | 0.0 | 1134 |
| MS.gene054153.t1 | MTR_3g095910 | 70.350 | 543 | 159 | 2 | 23 | 565 | 97 | 637 | 0.0 | 811 |
| MS.gene054153.t1 | MTR_1g019540 | 48.454 | 485 | 228 | 7 | 54 | 520 | 55 | 535 | 3.77e-168 | 488 |
| MS.gene054153.t1 | MTR_1g019540 | 48.454 | 485 | 228 | 7 | 54 | 520 | 108 | 588 | 6.81e-168 | 489 |
| MS.gene054153.t1 | MTR_1g019530 | 47.390 | 479 | 236 | 7 | 54 | 520 | 110 | 584 | 1.57e-157 | 463 |
| MS.gene054153.t1 | MTR_1g082880 | 40.653 | 551 | 278 | 11 | 1 | 522 | 20 | 550 | 3.47e-139 | 415 |
| MS.gene054153.t1 | MTR_7g113610 | 39.961 | 508 | 268 | 8 | 41 | 520 | 57 | 555 | 6.37e-134 | 402 |
| MS.gene054153.t1 | MTR_1g080460 | 36.000 | 175 | 106 | 5 | 223 | 394 | 16 | 187 | 2.20e-28 | 119 |
| MS.gene054153.t1 | MTR_7g115460 | 35.758 | 165 | 101 | 4 | 232 | 394 | 35 | 196 | 6.31e-27 | 115 |
| MS.gene054153.t1 | MTR_1g084670 | 26.154 | 260 | 136 | 8 | 228 | 443 | 18 | 265 | 7.48e-17 | 82.4 |
| MS.gene054153.t1 | MTR_1g084670 | 25.541 | 231 | 131 | 5 | 226 | 415 | 16 | 246 | 5.44e-16 | 79.0 |
| MS.gene054153.t1 | MTR_1g084670 | 32.500 | 120 | 78 | 1 | 226 | 342 | 16 | 135 | 8.32e-16 | 77.4 |
| MS.gene054153.t1 | MTR_7g109920 | 26.459 | 257 | 133 | 8 | 231 | 443 | 24 | 268 | 9.39e-16 | 79.3 |
| MS.gene054153.t1 | MTR_4g132185 | 25.854 | 205 | 113 | 3 | 228 | 393 | 19 | 223 | 1.37e-15 | 78.2 |
| MS.gene054153.t1 | MTR_7g109920 | 26.238 | 202 | 110 | 3 | 231 | 393 | 24 | 225 | 1.71e-15 | 77.4 |
| MS.gene054153.t1 | MTR_7g111850 | 24.016 | 254 | 139 | 7 | 233 | 443 | 26 | 268 | 2.72e-14 | 74.7 |
| MS.gene054153.t1 | MTR_1g084660 | 25.681 | 257 | 128 | 8 | 228 | 443 | 18 | 252 | 2.84e-13 | 71.2 |
| MS.gene054153.t1 | MTR_1g084660 | 25.000 | 228 | 123 | 5 | 226 | 415 | 16 | 233 | 2.14e-12 | 67.8 |
| MS.gene054153.t1 | MTR_4g100950 | 24.855 | 173 | 121 | 4 | 230 | 393 | 36 | 208 | 1.02e-11 | 67.8 |
| MS.gene054153.t1 | MTR_5g012590 | 25.568 | 176 | 116 | 5 | 230 | 393 | 38 | 210 | 2.40e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054153.t1 | AT1G77130 | 75.624 | 521 | 124 | 3 | 23 | 540 | 74 | 594 | 0.0 | 848 |
| MS.gene054153.t1 | AT3G18660 | 67.222 | 540 | 167 | 3 | 22 | 555 | 106 | 641 | 0.0 | 768 |
| MS.gene054153.t1 | AT3G18660 | 67.222 | 540 | 167 | 3 | 22 | 555 | 105 | 640 | 0.0 | 768 |
| MS.gene054153.t1 | AT3G18660 | 67.222 | 540 | 167 | 3 | 22 | 555 | 110 | 645 | 0.0 | 766 |
| MS.gene054153.t1 | AT4G33330 | 49.281 | 487 | 228 | 5 | 54 | 525 | 43 | 525 | 2.57e-171 | 496 |
| MS.gene054153.t1 | AT4G33330 | 49.281 | 487 | 228 | 5 | 54 | 525 | 111 | 593 | 2.47e-170 | 496 |
| MS.gene054153.t1 | AT4G33330 | 49.281 | 487 | 228 | 5 | 54 | 525 | 122 | 604 | 4.11e-170 | 496 |
| MS.gene054153.t1 | AT4G33330 | 49.793 | 482 | 223 | 5 | 54 | 520 | 111 | 588 | 7.50e-170 | 496 |
| MS.gene054153.t1 | AT1G08990 | 45.825 | 491 | 236 | 9 | 54 | 522 | 79 | 561 | 2.06e-144 | 429 |
| MS.gene054153.t1 | AT1G54940 | 43.381 | 491 | 240 | 10 | 54 | 520 | 74 | 550 | 1.71e-138 | 413 |
| MS.gene054153.t1 | AT4G33330 | 48.138 | 349 | 163 | 4 | 54 | 387 | 122 | 467 | 1.18e-107 | 331 |
| MS.gene054153.t1 | AT5G18480 | 37.222 | 180 | 107 | 5 | 216 | 393 | 16 | 191 | 6.04e-31 | 127 |
| MS.gene054153.t1 | AT4G26250 | 26.667 | 270 | 142 | 8 | 218 | 443 | 12 | 269 | 7.62e-18 | 85.5 |
| MS.gene054153.t1 | AT1G60470 | 27.138 | 269 | 135 | 8 | 224 | 443 | 11 | 267 | 9.21e-18 | 85.1 |
| MS.gene054153.t1 | AT1G09350 | 27.519 | 258 | 130 | 8 | 231 | 443 | 15 | 260 | 1.24e-17 | 84.7 |
| MS.gene054153.t1 | AT1G56600 | 25.623 | 281 | 147 | 9 | 208 | 443 | 3 | 266 | 3.13e-17 | 83.6 |
| MS.gene054153.t1 | AT1G60450 | 26.316 | 209 | 113 | 3 | 226 | 393 | 13 | 221 | 9.76e-16 | 79.0 |
| MS.gene054153.t1 | AT2G47180 | 23.000 | 300 | 170 | 9 | 220 | 475 | 18 | 300 | 5.13e-15 | 77.0 |
| MS.gene054153.t1 | AT5G30500 | 25.000 | 200 | 110 | 3 | 231 | 390 | 24 | 223 | 1.31e-14 | 74.3 |
| MS.gene054153.t1 | AT5G30500 | 24.490 | 196 | 108 | 3 | 231 | 386 | 24 | 219 | 3.21e-13 | 71.6 |
| MS.gene054153.t1 | AT5G23790 | 22.330 | 309 | 179 | 9 | 226 | 490 | 16 | 307 | 1.63e-12 | 69.3 |
| MS.gene054153.t1 | AT2G35710 | 26.966 | 178 | 113 | 6 | 230 | 394 | 61 | 234 | 1.52e-11 | 66.2 |
| MS.gene054153.t1 | AT2G35710 | 26.966 | 178 | 113 | 6 | 230 | 394 | 61 | 234 | 9.76e-11 | 64.7 |
Find 125 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAACTTCTTGAAACATTTC+TGG | 0.133286 | 1.3:+15123403 | MS.gene054153:CDS |
| ATTGCTGTAGTTTCCTTTCT+TGG | 0.140768 | 1.3:-15123700 | None:intergenic |
| TATGCTTCTGGTTCTGCTTT+TGG | 0.153956 | 1.3:-15123081 | None:intergenic |
| TTTCAAGAACATTAGTTATT+TGG | 0.160948 | 1.3:-15121520 | None:intergenic |
| TTGCACATTTCAACTACTTA+TGG | 0.215615 | 1.3:+15123290 | MS.gene054153:CDS |
| ATATTTATTCTTTGGGTTGC+AGG | 0.224728 | 1.3:+15121417 | MS.gene054153:CDS |
| TTATATGGATATTTATTCTT+TGG | 0.233016 | 1.3:+15121409 | None:intergenic |
| TTCAAGAAGTTCATGTGTTT+TGG | 0.260706 | 1.3:-15123393 | None:intergenic |
| TTCCACTCGTTATATGCTTC+TGG | 0.267699 | 1.3:-15123093 | None:intergenic |
| TCTTCTTCATCTATCCATTC+TGG | 0.271067 | 1.3:-15121695 | None:intergenic |
| TCCTTGCAAGTAAAGAGATT+TGG | 0.288240 | 1.3:-15121938 | None:intergenic |
| TCCTGATTCTTTGAATTGTA+TGG | 0.290849 | 1.3:-15123056 | None:intergenic |
| GGAGAGTATGTTATGGCATT+GGG | 0.309950 | 1.3:+15123788 | MS.gene054153:CDS |
| GGCATTGGGGTGACAAGAAT+TGG | 0.313543 | 1.3:+15123802 | MS.gene054153:CDS |
| GAAGGATAAGGACACATATC+AGG | 0.317828 | 1.3:+15121547 | MS.gene054153:CDS |
| TATATGGATATTTATTCTTT+GGG | 0.323736 | 1.3:+15121410 | None:intergenic |
| AACGCGTGATCTCGTGATTC+TGG | 0.330372 | 1.3:+15122975 | MS.gene054153:CDS |
| TTTCCTATGGCTGATACTTC+AGG | 0.331832 | 1.3:-15123219 | None:intergenic |
| TCCGAGATTACGACTGCAAC+TGG | 0.347243 | 1.3:+15123532 | MS.gene054153:CDS |
| AGGCGACGAGGATGAGAAAA+AGG | 0.356243 | 1.3:+15123428 | MS.gene054153:CDS |
| TCCATACAATTCAAAGAATC+AGG | 0.366674 | 1.3:+15123055 | MS.gene054153:CDS |
| AGGACTACATGCTCAGCTTC+TGG | 0.371387 | 1.3:-15121626 | None:intergenic |
| TCTTGAAAATTTGAAGGATA+AGG | 0.375525 | 1.3:+15121535 | MS.gene054153:CDS |
| CTCTCTGAGTTTATGCAGGT+CGG | 0.379464 | 1.3:-15121999 | None:intergenic |
| ATACTTCAGGCATCTCAAAA+AGG | 0.381307 | 1.3:-15123206 | None:intergenic |
| TAATGTTCTTGAAAATTTGA+AGG | 0.384534 | 1.3:+15121529 | MS.gene054153:CDS |
| AAGCTTCCCTGCGACAAGTC+AGG | 0.395485 | 1.3:+15121797 | MS.gene054153:CDS |
| TGAACTATCAGTTCCTTTGA+AGG | 0.396557 | 1.3:+15122048 | MS.gene054153:CDS |
| CTTTATGTCATCCACTATCT+AGG | 0.402882 | 1.3:+15123489 | MS.gene054153:CDS |
| TTTCCTGGTGCCTGAATCCT+AGG | 0.405848 | 1.3:-15121749 | None:intergenic |
| TCCAACACTACCTAGGATTC+AGG | 0.408343 | 1.3:+15121739 | MS.gene054153:CDS |
| GAGAAGCTGCAGTTACCTAT+TGG | 0.408531 | 1.3:+15122019 | MS.gene054153:CDS |
| GGGAGAGTATGTTATGGCAT+TGG | 0.410396 | 1.3:+15123787 | MS.gene054153:CDS |
| AGGAGTGGCTTGGCAGCAGC+TGG | 0.412642 | 1.3:+15123024 | MS.gene054153:CDS |
| CAAGTAAAGAGATTTGGAAT+TGG | 0.412648 | 1.3:-15121932 | None:intergenic |
| GTCTTGCTGCTTCAATCTGC+AGG | 0.421473 | 1.3:-15121850 | None:intergenic |
| GAACTTCTTGAAACATTTCT+GGG | 0.433094 | 1.3:+15123404 | MS.gene054153:CDS |
| GTTTCTGGGAGAGTATGTTA+TGG | 0.438372 | 1.3:+15123781 | MS.gene054153:CDS |
| ATCCTACAATGGTGGTGACC+AGG | 0.447256 | 1.3:+15123332 | MS.gene054153:CDS |
| GCGTTTGAAAACGTGCTTTG+AGG | 0.447428 | 1.3:+15123752 | MS.gene054153:CDS |
| ATTACAGCAAATTTCGTCTC+TGG | 0.450343 | 1.3:+15123115 | MS.gene054153:CDS |
| GGATTGTTGCATAAGCTTCT+CGG | 0.451047 | 1.3:-15122885 | None:intergenic |
| TCAGTTCCTTTGAAGGCTAA+AGG | 0.454613 | 1.3:+15122055 | MS.gene054153:CDS |
| GATAGTTCACATGAACCAAT+AGG | 0.459168 | 1.3:-15122034 | None:intergenic |
| GCTCAAAGTATTCGAATGTC+TGG | 0.460744 | 1.3:+15122949 | MS.gene054153:CDS |
| CTAGATAGTGGATGACATAA+AGG | 0.461375 | 1.3:-15123488 | None:intergenic |
| TGCAGAAGTTCTGTTTGCTT+AGG | 0.469003 | 1.3:+15123637 | MS.gene054153:CDS |
| TCCAAATCTCTTTACTTGCA+AGG | 0.470250 | 1.3:+15121937 | MS.gene054153:CDS |
| TGCAGCGTGACGGGAATGCC+TGG | 0.473934 | 1.3:+15121966 | MS.gene054153:CDS |
| TGTTACTAGAAGCATAGTTC+AGG | 0.483810 | 1.3:-15121652 | None:intergenic |
| TCTGCACATATATATGTTTG+TGG | 0.485140 | 1.3:+15122913 | MS.gene054153:CDS |
| TCTCTGAGTTTATGCAGGTC+GGG | 0.486148 | 1.3:-15121998 | None:intergenic |
| AGGATATTATGCAGCGTGAC+GGG | 0.490590 | 1.3:+15121957 | MS.gene054153:CDS |
| GTTAGAGTGGGATCGTAGAC+AGG | 0.496234 | 1.3:+15123677 | MS.gene054153:CDS |
| CATATATATGTGCAGAGTGC+AGG | 0.498763 | 1.3:-15122906 | None:intergenic |
| CCAGCGCCCTGACTTGTCGC+AGG | 0.504978 | 1.3:-15121804 | None:intergenic |
| ATGTAGCTCATGCGAGGTGG+TGG | 0.505348 | 1.3:+15123586 | MS.gene054153:CDS |
| ATGCTTCTAGTAACATCACT+TGG | 0.506425 | 1.3:+15121660 | MS.gene054153:CDS |
| GAAACTACAGCAATGGTCAC+TGG | 0.506581 | 1.3:+15123709 | MS.gene054153:CDS |
| CAGTGTAGCATTGTTTCCTA+TGG | 0.507446 | 1.3:-15123232 | None:intergenic |
| AGACTTGCTGCTACTTCCAA+AGG | 0.510611 | 1.3:+15121869 | MS.gene054153:CDS |
| ACTGTTCAACTCAGGTGTAA+TGG | 0.513305 | 1.3:+15123251 | MS.gene054153:CDS |
| ACCCTGGTCACCACCATTGT+AGG | 0.514384 | 1.3:-15123334 | None:intergenic |
| ATGCACTGGATGAAACCCTT+TGG | 0.516067 | 1.3:-15121885 | None:intergenic |
| GCTTCTCTCTGAGTTTATGC+AGG | 0.516546 | 1.3:-15122003 | None:intergenic |
| AATACTTTGAGCTGCGGTGA+TGG | 0.520044 | 1.3:-15122938 | None:intergenic |
| TTCTTGAAACATTTCTGGGA+AGG | 0.522014 | 1.3:+15123408 | MS.gene054153:CDS |
| TCCAGTTGCAGTCGTAATCT+CGG | 0.522527 | 1.3:-15123533 | None:intergenic |
| AGCAGAAGGCAGCGTTAGAG+TGG | 0.527478 | 1.3:+15123664 | MS.gene054153:CDS |
| TCCTGACCTTTAGCCTTCAA+AGG | 0.531986 | 1.3:-15122061 | None:intergenic |
| AGCTTCCCTGCGACAAGTCA+GGG | 0.533888 | 1.3:+15121798 | MS.gene054153:CDS |
| GTGGCTTGGCAGCAGCTGGA+TGG | 0.534926 | 1.3:+15123028 | MS.gene054153:CDS |
| GACTTGCTGCTACTTCCAAA+GGG | 0.541842 | 1.3:+15121870 | MS.gene054153:CDS |
| CTACTTGTCCAACACTACCT+AGG | 0.544561 | 1.3:+15121732 | MS.gene054153:CDS |
| GCCTGAATCCTAGGTAGTGT+TGG | 0.546134 | 1.3:-15121740 | None:intergenic |
| CCTGCGACAAGTCAGGGCGC+TGG | 0.547118 | 1.3:+15121804 | MS.gene054153:CDS |
| TGATTATCACAGGAGTGGCT+TGG | 0.547142 | 1.3:+15123014 | MS.gene054153:CDS |
| TGGATGACATAAAGGATTGG+TGG | 0.547445 | 1.3:-15123480 | None:intergenic |
| CTGGAACGTGGACATTCTGC+AGG | 0.550039 | 1.3:+15123551 | MS.gene054153:CDS |
| GATCGTAGACAGGCCAAGAA+AGG | 0.550520 | 1.3:+15123687 | MS.gene054153:CDS |
| AGAATGGATAGATGAAGAAG+AGG | 0.552398 | 1.3:+15121697 | MS.gene054153:CDS |
| CGATATTTCTGAGTATAAGA+AGG | 0.553853 | 1.3:-15123179 | None:intergenic |
| TTCCTGTCGTTTACATATGT+AGG | 0.555071 | 1.3:-15121440 | None:intergenic |
| AAACAATAAGTGATTATCAC+AGG | 0.557166 | 1.3:+15123004 | MS.gene054153:CDS |
| CTAGGTAGTGTTGGACAAGT+AGG | 0.557193 | 1.3:-15121731 | None:intergenic |
| ATGGTTTAGTACCTAGATAG+TGG | 0.565355 | 1.3:-15123500 | None:intergenic |
| AAGGACACATATCAGGGTGT+TGG | 0.565940 | 1.3:+15121554 | MS.gene054153:CDS |
| GGCCTACATATGTAAACGAC+AGG | 0.567340 | 1.3:+15121438 | MS.gene054153:CDS |
| GTCACGAAAAGTACATGCAC+TGG | 0.569264 | 1.3:-15121899 | None:intergenic |
| AGTTGAAATGTGCAATTCGA+TGG | 0.571909 | 1.3:-15123282 | None:intergenic |
| CAGGTCGGGTTCATAAAGCC+AGG | 0.574180 | 1.3:-15121984 | None:intergenic |
| AGCTCATGCGAGGTGGTGGA+AGG | 0.575417 | 1.3:+15123590 | MS.gene054153:CDS |
| TTTGCTTAGGTCGAAGCAGA+AGG | 0.575458 | 1.3:+15123650 | MS.gene054153:CDS |
| TCCTACAATGGTGGTGACCA+GGG | 0.581119 | 1.3:+15123333 | MS.gene054153:CDS |
| GGGAAGACTTGTATCCAGAA+TGG | 0.585294 | 1.3:+15121681 | MS.gene054153:CDS |
| ACATATGTAAACGACAGGAA+TGG | 0.596076 | 1.3:+15121443 | MS.gene054153:CDS |
| CAGCGCCCTGACTTGTCGCA+GGG | 0.596806 | 1.3:-15121803 | None:intergenic |
| CTACCTAGGATTCAGGCACC+AGG | 0.597753 | 1.3:+15121746 | MS.gene054153:CDS |
| AAGGATATTATGCAGCGTGA+CGG | 0.600793 | 1.3:+15121956 | MS.gene054153:CDS |
| TAGTGGATGACATAAAGGAT+TGG | 0.601872 | 1.3:-15123483 | None:intergenic |
| ATGCCTGAAGTATCAGCCAT+AGG | 0.604435 | 1.3:+15123216 | MS.gene054153:CDS |
| AATGAGATTGTATCCTACAA+TGG | 0.606182 | 1.3:+15123321 | MS.gene054153:CDS |
| AAATTTCATTTAGATAACCC+TGG | 0.606443 | 1.3:-15123350 | None:intergenic |
| GCAGAAGGCAGCGTTAGAGT+GGG | 0.609692 | 1.3:+15123665 | MS.gene054153:CDS |
| ATGAAAGTGAGATTGACCAC+TGG | 0.622446 | 1.3:+15121591 | MS.gene054153:CDS |
| AACCAGAAGCATATAACGAG+TGG | 0.623151 | 1.3:+15123091 | MS.gene054153:CDS |
| CTGGTACTAGCTGCTTCCAG+TGG | 0.625456 | 1.3:-15121607 | None:intergenic |
| AAGAAAGGAAACTACAGCAA+TGG | 0.626082 | 1.3:+15123702 | MS.gene054153:CDS |
| CATTCGAATACTTTGAGCTG+CGG | 0.628095 | 1.3:-15122944 | None:intergenic |
| ATTTCTGAGTATAAGAAGGT+CGG | 0.628917 | 1.3:-15123175 | None:intergenic |
| TAGAAGCATAGTTCAGGCGA+AGG | 0.629094 | 1.3:-15121646 | None:intergenic |
| AAGGATAAGGACACATATCA+GGG | 0.632162 | 1.3:+15121548 | MS.gene054153:CDS |
| TGCTTCTAGTAACATCACTT+GGG | 0.638241 | 1.3:+15121661 | MS.gene054153:CDS |
| AATGCTACACTGTTCAACTC+AGG | 0.645973 | 1.3:+15123243 | MS.gene054153:CDS |
| GAGAGTATGTTATGGCATTG+GGG | 0.651503 | 1.3:+15123789 | MS.gene054153:CDS |
| TAATCTCGGAAACAAAGCCA+TGG | 0.656479 | 1.3:-15123519 | None:intergenic |
| ACATTTCTGGGAAGGCGACG+AGG | 0.659097 | 1.3:+15123416 | MS.gene054153:CDS |
| TTACGACTGCAACTGGAACG+TGG | 0.659215 | 1.3:+15123539 | MS.gene054153:CDS |
| ACTATCTAGGTACTAAACCA+TGG | 0.660025 | 1.3:+15123502 | MS.gene054153:CDS |
| CGAGCAATGTAGCTCATGCG+AGG | 0.661213 | 1.3:+15123580 | MS.gene054153:CDS |
| ATAAGTGATTATCACAGGAG+TGG | 0.662338 | 1.3:+15123009 | MS.gene054153:CDS |
| GCAATGTAGCTCATGCGAGG+TGG | 0.689730 | 1.3:+15123583 | MS.gene054153:CDS |
| GTTCAACTCAGGTGTAATGG+TGG | 0.709097 | 1.3:+15123254 | MS.gene054153:CDS |
| GAGATTGTATCCTACAATGG+TGG | 0.728088 | 1.3:+15123324 | MS.gene054153:CDS |
| ACAGCAATAAGATCAAGACG+TGG | 0.768801 | 1.3:-15121773 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATTGAATCTTATTGTC+TGG | + | chr1.3:15122688-15122707 | MS.gene054153:intron | 20.0% |
| !! | TAATGTTCTTGAAAATTTGA+AGG | + | chr1.3:15121529-15121548 | MS.gene054153:CDS | 20.0% |
| !! | TGTTCATTAACATTGAAAAT+AGG | - | chr1.3:15122281-15122300 | None:intergenic | 20.0% |
| !! | TTTCAAGAACATTAGTTATT+TGG | - | chr1.3:15121523-15121542 | None:intergenic | 20.0% |
| !!! | ATCTAAATGAAATTTTCACA+TGG | + | chr1.3:15123358-15123377 | MS.gene054153:CDS | 20.0% |
| ! | AAACAATAAGTGATTATCAC+AGG | + | chr1.3:15123004-15123023 | MS.gene054153:CDS | 25.0% |
| ! | AAATTTCATTTAGATAACCC+TGG | - | chr1.3:15123353-15123372 | None:intergenic | 25.0% |
| ! | ACATTAAGCAATAAGGTAAT+CGG | - | chr1.3:15122646-15122665 | None:intergenic | 25.0% |
| ! | TCTTGAAAATTTGAAGGATA+AGG | + | chr1.3:15121535-15121554 | MS.gene054153:CDS | 25.0% |
| !! | CATCTTTTCTTAATATTGAC+TGG | + | chr1.3:15121495-15121514 | MS.gene054153:CDS | 25.0% |
| !! | TAAATGAAATTTTCACATGG+TGG | + | chr1.3:15123361-15123380 | MS.gene054153:CDS | 25.0% |
| !! | TTCAACAGAAAATTTTCACT+CGG | + | chr1.3:15122852-15122871 | MS.gene054153:intron | 25.0% |
| !! | TTTTCTTCAATATTCAGATC+TGG | - | chr1.3:15122336-15122355 | None:intergenic | 25.0% |
| AATGAGATTGTATCCTACAA+TGG | + | chr1.3:15123321-15123340 | MS.gene054153:CDS | 30.0% | |
| ATGGAGTTAACTAGATATAC+TGG | + | chr1.3:15122808-15122827 | MS.gene054153:intron | 30.0% | |
| ATTTCTGAGTATAAGAAGGT+CGG | - | chr1.3:15123178-15123197 | None:intergenic | 30.0% | |
| CATGTATACTGGAAATTCAA+AGG | - | chr1.3:15122791-15122810 | None:intergenic | 30.0% | |
| CTTTGAATTTCCAGTATACA+TGG | + | chr1.3:15122789-15122808 | MS.gene054153:intron | 30.0% | |
| GAACTTCTTGAAACATTTCT+GGG | + | chr1.3:15123404-15123423 | MS.gene054153:CDS | 30.0% | |
| TAAGCATAAAAACCATGTCT+TGG | + | chr1.3:15122717-15122736 | MS.gene054153:intron | 30.0% | |
| TCCATACAATTCAAAGAATC+AGG | + | chr1.3:15123055-15123074 | MS.gene054153:CDS | 30.0% | |
| TCCTGATTCTTTGAATTGTA+TGG | - | chr1.3:15123059-15123078 | None:intergenic | 30.0% | |
| TCTGCACATATATATGTTTG+TGG | + | chr1.3:15122913-15122932 | MS.gene054153:CDS | 30.0% | |
| TGAACTTCTTGAAACATTTC+TGG | + | chr1.3:15123403-15123422 | MS.gene054153:CDS | 30.0% | |
| TTCTCTGACATTAAGCAATA+AGG | - | chr1.3:15122653-15122672 | None:intergenic | 30.0% | |
| TTGCACATTTCAACTACTTA+TGG | + | chr1.3:15123290-15123309 | MS.gene054153:CDS | 30.0% | |
| ! | AGAAAATTTTCACTCGGAAA+GGG | + | chr1.3:15122858-15122877 | MS.gene054153:intron | 30.0% |
| ! | CAAGTAAAGAGATTTGGAAT+TGG | - | chr1.3:15121935-15121954 | None:intergenic | 30.0% |
| ! | CGATATTTCTGAGTATAAGA+AGG | - | chr1.3:15123182-15123201 | None:intergenic | 30.0% |
| ! | GAGACTTCTATAACCTTTTA+TGG | + | chr1.3:15122204-15122223 | MS.gene054153:intron | 30.0% |
| ! | GAGTGAAAATTTTCTGTTGA+AGG | - | chr1.3:15122853-15122872 | None:intergenic | 30.0% |
| ! | TTCAAGAAGTTCATGTGTTT+TGG | - | chr1.3:15123396-15123415 | None:intergenic | 30.0% |
| !! | ATATTTATTCTTTGGGTTGC+AGG | + | chr1.3:15121417-15121436 | MS.gene054153:CDS | 30.0% |
| !! | CTTTGAGGATTTTTGTTTCT+GGG | + | chr1.3:15123767-15123786 | MS.gene054153:CDS | 30.0% |
| !! | TGAAAAGTGCTAAAAGAACA+AGG | - | chr1.3:15122128-15122147 | None:intergenic | 30.0% |
| AACACCATAGATACTAGTCA+AGG | + | chr1.3:15122297-15122316 | MS.gene054153:intron | 35.0% | |
| AAGAAAGGAAACTACAGCAA+TGG | + | chr1.3:15123702-15123721 | MS.gene054153:CDS | 35.0% | |
| AAGGATAAGGACACATATCA+GGG | + | chr1.3:15121548-15121567 | MS.gene054153:CDS | 35.0% | |
| ACATATGTAAACGACAGGAA+TGG | + | chr1.3:15121443-15121462 | MS.gene054153:CDS | 35.0% | |
| ACTATCTAGGTACTAAACCA+TGG | + | chr1.3:15123502-15123521 | MS.gene054153:CDS | 35.0% | |
| AGAATGGATAGATGAAGAAG+AGG | + | chr1.3:15121697-15121716 | MS.gene054153:CDS | 35.0% | |
| AGTTGAAATGTGCAATTCGA+TGG | - | chr1.3:15123285-15123304 | None:intergenic | 35.0% | |
| ATAAGTGATTATCACAGGAG+TGG | + | chr1.3:15123009-15123028 | MS.gene054153:CDS | 35.0% | |
| ATACTTCAGGCATCTCAAAA+AGG | - | chr1.3:15123209-15123228 | None:intergenic | 35.0% | |
| ATGCTTCTAGTAACATCACT+TGG | + | chr1.3:15121660-15121679 | MS.gene054153:CDS | 35.0% | |
| ATGGTTTAGTACCTAGATAG+TGG | - | chr1.3:15123503-15123522 | None:intergenic | 35.0% | |
| ATTACAGCAAATTTCGTCTC+TGG | + | chr1.3:15123115-15123134 | MS.gene054153:CDS | 35.0% | |
| ATTGCTGTAGTTTCCTTTCT+TGG | - | chr1.3:15123703-15123722 | None:intergenic | 35.0% | |
| CAGATCTGAATGTTGAAGAA+AGG | + | chr1.3:15122410-15122429 | MS.gene054153:intron | 35.0% | |
| CTAGTTAACTCCATGTATAC+TGG | - | chr1.3:15122802-15122821 | None:intergenic | 35.0% | |
| CTTTATGTCATCCACTATCT+AGG | + | chr1.3:15123489-15123508 | MS.gene054153:CDS | 35.0% | |
| CTTTCTTCAACATTCAGATC+TGG | - | chr1.3:15122412-15122431 | None:intergenic | 35.0% | |
| GATAGTTCACATGAACCAAT+AGG | - | chr1.3:15122037-15122056 | None:intergenic | 35.0% | |
| TCCAAATCTCTTTACTTGCA+AGG | + | chr1.3:15121937-15121956 | MS.gene054153:CDS | 35.0% | |
| TCCTTGCAAGTAAAGAGATT+TGG | - | chr1.3:15121941-15121960 | None:intergenic | 35.0% | |
| TCGTATTCATTCAAGAGATC+AGG | + | chr1.3:15122507-15122526 | MS.gene054153:intron | 35.0% | |
| TCTTCTTCATCTATCCATTC+TGG | - | chr1.3:15121698-15121717 | None:intergenic | 35.0% | |
| TGAACTATCAGTTCCTTTGA+AGG | + | chr1.3:15122048-15122067 | MS.gene054153:CDS | 35.0% | |
| TGCTTCTAGTAACATCACTT+GGG | + | chr1.3:15121661-15121680 | MS.gene054153:CDS | 35.0% | |
| ! | AAATTTTCACATGGTGGCAT+CGG | + | chr1.3:15123367-15123386 | MS.gene054153:CDS | 35.0% |
| ! | ACTAGTCAAGGTGTCTATTA+AGG | + | chr1.3:15122309-15122328 | MS.gene054153:intron | 35.0% |
| ! | CAATGATTGTTTTCCCAACT+CGG | + | chr1.3:15122442-15122461 | MS.gene054153:intron | 35.0% |
| ! | CAGAAAATTTTCACTCGGAA+AGG | + | chr1.3:15122857-15122876 | MS.gene054153:intron | 35.0% |
| ! | TAGTGGATGACATAAAGGAT+TGG | - | chr1.3:15123486-15123505 | None:intergenic | 35.0% |
| ! | TGTTACTAGAAGCATAGTTC+AGG | - | chr1.3:15121655-15121674 | None:intergenic | 35.0% |
| ! | TTCCTGTCGTTTACATATGT+AGG | - | chr1.3:15121443-15121462 | None:intergenic | 35.0% |
| ! | TTCTTGAAACATTTCTGGGA+AGG | + | chr1.3:15123408-15123427 | MS.gene054153:CDS | 35.0% |
| !! | CTAGATAGTGGATGACATAA+AGG | - | chr1.3:15123491-15123510 | None:intergenic | 35.0% |
| !! | TCAAGCATAGTTCTGAATAC+CGG | - | chr1.3:15122252-15122271 | None:intergenic | 35.0% |
| !!! | GCTTTGAGGATTTTTGTTTC+TGG | + | chr1.3:15123766-15123785 | MS.gene054153:CDS | 35.0% |
| AACCGAAAAAGAAACGTGTG+CGG | - | chr1.3:15122581-15122600 | None:intergenic | 40.0% | |
| AACTCGGAGATGTTGCTAAT+TGG | + | chr1.3:15122458-15122477 | MS.gene054153:intron | 40.0% | |
| AAGGATATTATGCAGCGTGA+CGG | + | chr1.3:15121956-15121975 | MS.gene054153:CDS | 40.0% | |
| AATGCTACACTGTTCAACTC+AGG | + | chr1.3:15123243-15123262 | MS.gene054153:CDS | 40.0% | |
| AATTAGCAACATCTCCGAGT+TGG | - | chr1.3:15122459-15122478 | None:intergenic | 40.0% | |
| ACAGCAATAAGATCAAGACG+TGG | - | chr1.3:15121776-15121795 | None:intergenic | 40.0% | |
| ACTCGGAGATGTTGCTAATT+GGG | + | chr1.3:15122459-15122478 | MS.gene054153:intron | 40.0% | |
| ACTGTTCAACTCAGGTGTAA+TGG | + | chr1.3:15123251-15123270 | MS.gene054153:CDS | 40.0% | |
| ATGAAAGTGAGATTGACCAC+TGG | + | chr1.3:15121591-15121610 | MS.gene054153:CDS | 40.0% | |
| ATTAGCAACATCTCCGAGTT+GGG | - | chr1.3:15122458-15122477 | None:intergenic | 40.0% | |
| ATTGGGAAAATGACCAGTGT+AGG | + | chr1.3:15122476-15122495 | MS.gene054153:intron | 40.0% | |
| CAGTGTAGCATTGTTTCCTA+TGG | - | chr1.3:15123235-15123254 | None:intergenic | 40.0% | |
| CATATATATGTGCAGAGTGC+AGG | - | chr1.3:15122909-15122928 | None:intergenic | 40.0% | |
| CATTCGAATACTTTGAGCTG+CGG | - | chr1.3:15122947-15122966 | None:intergenic | 40.0% | |
| GAAGGATAAGGACACATATC+AGG | + | chr1.3:15121547-15121566 | MS.gene054153:CDS | 40.0% | |
| GACACCTTGACTAGTATCTA+TGG | - | chr1.3:15122304-15122323 | None:intergenic | 40.0% | |
| GAGATTGTATCCTACAATGG+TGG | + | chr1.3:15123324-15123343 | MS.gene054153:CDS | 40.0% | |
| GGATTGTTGCATAAGCTTCT+CGG | - | chr1.3:15122888-15122907 | None:intergenic | 40.0% | |
| TAATCTCGGAAACAAAGCCA+TGG | - | chr1.3:15123522-15123541 | None:intergenic | 40.0% | |
| TACGAATTAATGCCCTACAC+TGG | - | chr1.3:15122492-15122511 | None:intergenic | 40.0% | |
| TACGCTTTCAAGAGCCATAT+TGG | - | chr1.3:15122757-15122776 | None:intergenic | 40.0% | |
| TGCAGAAGTTCTGTTTGCTT+AGG | + | chr1.3:15123637-15123656 | MS.gene054153:CDS | 40.0% | |
| TGGATGACATAAAGGATTGG+TGG | - | chr1.3:15123483-15123502 | None:intergenic | 40.0% | |
| TTCCACTCGTTATATGCTTC+TGG | - | chr1.3:15123096-15123115 | None:intergenic | 40.0% | |
| TTGGGAAAATGACCAGTGTA+GGG | + | chr1.3:15122477-15122496 | MS.gene054153:intron | 40.0% | |
| TTTCCTATGGCTGATACTTC+AGG | - | chr1.3:15123222-15123241 | None:intergenic | 40.0% | |
| ! | AACCAGAAGCATATAACGAG+TGG | + | chr1.3:15123091-15123110 | MS.gene054153:CDS | 40.0% |
| ! | CAGAACTTCTGCAAGTTTTC+TGG | - | chr1.3:15123630-15123649 | None:intergenic | 40.0% |
| ! | GAGAGTATGTTATGGCATTG+GGG | + | chr1.3:15123789-15123808 | MS.gene054153:CDS | 40.0% |
| ! | GCTCAAAGTATTCGAATGTC+TGG | + | chr1.3:15122949-15122968 | MS.gene054153:CDS | 40.0% |
| ! | GGAGAGTATGTTATGGCATT+GGG | + | chr1.3:15123788-15123807 | MS.gene054153:CDS | 40.0% |
| ! | GTTTCTGGGAGAGTATGTTA+TGG | + | chr1.3:15123781-15123800 | MS.gene054153:CDS | 40.0% |
| ! | TCAAAGCACGTTTTCAAACG+CGG | - | chr1.3:15123753-15123772 | None:intergenic | 40.0% |
| ! | TCAGTTCCTTTGAAGGCTAA+AGG | + | chr1.3:15122055-15122074 | MS.gene054153:CDS | 40.0% |
| ! | TGCATTTTTCCGCAATGTCA+AGG | - | chr1.3:15122158-15122177 | None:intergenic | 40.0% |
| !!! | GATTTAGTTTTGACAGCAGC+AGG | - | chr1.3:15123858-15123877 | None:intergenic | 40.0% |
| !!! | TATGCTTCTGGTTCTGCTTT+TGG | - | chr1.3:15123084-15123103 | None:intergenic | 40.0% |
| AAGGACACATATCAGGGTGT+TGG | + | chr1.3:15121554-15121573 | MS.gene054153:CDS | 45.0% | |
| AATACTTTGAGCTGCGGTGA+TGG | - | chr1.3:15122941-15122960 | None:intergenic | 45.0% | |
| AGGATATTATGCAGCGTGAC+GGG | + | chr1.3:15121957-15121976 | MS.gene054153:CDS | 45.0% | |
| ATGCACTGGATGAAACCCTT+TGG | - | chr1.3:15121888-15121907 | None:intergenic | 45.0% | |
| CAATGCAATTGCAGCTGCAT+CGG | - | chr1.3:15122182-15122201 | None:intergenic | 45.0% | |
| CAATGCGAACCTTGACATTG+CGG | + | chr1.3:15122146-15122165 | MS.gene054153:intron | 45.0% | |
| CGGTTAGTAGTTAGCGATGT+GGG | - | chr1.3:15122626-15122645 | None:intergenic | 45.0% | |
| CTACTTGTCCAACACTACCT+AGG | + | chr1.3:15121732-15121751 | MS.gene054153:CDS | 45.0% | |
| CTCTCTGAGTTTATGCAGGT+CGG | - | chr1.3:15122002-15122021 | None:intergenic | 45.0% | |
| GAAACTACAGCAATGGTCAC+TGG | + | chr1.3:15123709-15123728 | MS.gene054153:CDS | 45.0% | |
| GAGAAGCTGCAGTTACCTAT+TGG | + | chr1.3:15122019-15122038 | MS.gene054153:CDS | 45.0% | |
| GCGACAAAAACTCGTCTCTT+TGG | + | chr1.3:15123450-15123469 | MS.gene054153:CDS | 45.0% | |
| GCGTTTGAAAACGTGCTTTG+AGG | + | chr1.3:15123752-15123771 | MS.gene054153:CDS | 45.0% | |
| GCTTCTCTCTGAGTTTATGC+AGG | - | chr1.3:15122006-15122025 | None:intergenic | 45.0% | |
| GGCCTACATATGTAAACGAC+AGG | + | chr1.3:15121438-15121457 | MS.gene054153:CDS | 45.0% | |
| GGGAAGACTTGTATCCAGAA+TGG | + | chr1.3:15121681-15121700 | MS.gene054153:CDS | 45.0% | |
| GTTCAACTCAGGTGTAATGG+TGG | + | chr1.3:15123254-15123273 | MS.gene054153:CDS | 45.0% | |
| TCCAACACTACCTAGGATTC+AGG | + | chr1.3:15121739-15121758 | MS.gene054153:CDS | 45.0% | |
| TCCAGTTGCAGTCGTAATCT+CGG | - | chr1.3:15123536-15123555 | None:intergenic | 45.0% | |
| TCGGTTAGTAGTTAGCGATG+TGG | - | chr1.3:15122627-15122646 | None:intergenic | 45.0% | |
| TCTCTGAGTTTATGCAGGTC+GGG | - | chr1.3:15122001-15122020 | None:intergenic | 45.0% | |
| TGATTATCACAGGAGTGGCT+TGG | + | chr1.3:15123014-15123033 | MS.gene054153:CDS | 45.0% | |
| TGCGTTCCATAAGGCCAATA+TGG | + | chr1.3:15122740-15122759 | MS.gene054153:intron | 45.0% | |
| TTATGGAACGCACCAAGACA+TGG | - | chr1.3:15122732-15122751 | None:intergenic | 45.0% | |
| TTTGCTTAGGTCGAAGCAGA+AGG | + | chr1.3:15123650-15123669 | MS.gene054153:CDS | 45.0% | |
| ! | AAGAAACGTGTGCGGCTTTT+AGG | - | chr1.3:15122573-15122592 | None:intergenic | 45.0% |
| ! | AGATCAAGACGTGGTTTTCC+TGG | - | chr1.3:15121767-15121786 | None:intergenic | 45.0% |
| ! | AGCCGCACACGTTTCTTTTT+CGG | + | chr1.3:15122576-15122595 | MS.gene054153:intron | 45.0% |
| ! | ATGCCTGAAGTATCAGCCAT+AGG | + | chr1.3:15123216-15123235 | MS.gene054153:CDS | 45.0% |
| ! | ATGTCTTGGTGCGTTCCATA+AGG | + | chr1.3:15122731-15122750 | MS.gene054153:intron | 45.0% |
| ! | CAAAGCACGTTTTCAAACGC+GGG | - | chr1.3:15123752-15123771 | None:intergenic | 45.0% |
| ! | CTAGGTAGTGTTGGACAAGT+AGG | - | chr1.3:15121734-15121753 | None:intergenic | 45.0% |
| ! | GATCTGGTACTTAGCATCGA+TGG | - | chr1.3:15122396-15122415 | None:intergenic | 45.0% |
| ! | GGGAGAGTATGTTATGGCAT+TGG | + | chr1.3:15123787-15123806 | MS.gene054153:CDS | 45.0% |
| ! | GTCACGAAAAGTACATGCAC+TGG | - | chr1.3:15121902-15121921 | None:intergenic | 45.0% |
| ! | GTGCATGTACTTTTCGTGAC+TGG | + | chr1.3:15121902-15121921 | MS.gene054153:CDS | 45.0% |
| ! | TAGAAGCATAGTTCAGGCGA+AGG | - | chr1.3:15121649-15121668 | None:intergenic | 45.0% |
| ! | TCCTGACCTTTAGCCTTCAA+AGG | - | chr1.3:15122064-15122083 | None:intergenic | 45.0% |
| ! | TCCTTTGAAGGCTAAAGGTC+AGG | + | chr1.3:15122060-15122079 | MS.gene054153:intron | 45.0% |
| !! | AGACTTGCTGCTACTTCCAA+AGG | + | chr1.3:15121869-15121888 | MS.gene054153:CDS | 45.0% |
| !! | CAAGAGCCATATTGGCCTTA+TGG | - | chr1.3:15122749-15122768 | None:intergenic | 45.0% |
| !! | CTTCTGCAAGTTTTCTGGCA+TGG | - | chr1.3:15123625-15123644 | None:intergenic | 45.0% |
| !! | GACTTGCTGCTACTTCCAAA+GGG | + | chr1.3:15121870-15121889 | MS.gene054153:CDS | 45.0% |
| !!! | TTAGTTTTGACAGCAGCAGG+TGG | - | chr1.3:15123855-15123874 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTTTTAAGAATTT+GGG | - | chr1.3:15122542-15122561 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTAAGAATT+TGG | - | chr1.3:15122543-15122562 | None:intergenic | 5.0% |
| AACGCGTGATCTCGTGATTC+TGG | + | chr1.3:15122975-15122994 | MS.gene054153:CDS | 50.0% | |
| ACAGTTGCGGCAGCCATAAA+AGG | - | chr1.3:15122220-15122239 | None:intergenic | 50.0% | |
| AGGACTACATGCTCAGCTTC+TGG | - | chr1.3:15121629-15121648 | None:intergenic | 50.0% | |
| AGGCGACGAGGATGAGAAAA+AGG | + | chr1.3:15123428-15123447 | MS.gene054153:CDS | 50.0% | |
| GATCGTAGACAGGCCAAGAA+AGG | + | chr1.3:15123687-15123706 | MS.gene054153:CDS | 50.0% | |
| GCCTGAATCCTAGGTAGTGT+TGG | - | chr1.3:15121743-15121762 | None:intergenic | 50.0% | |
| GTTAGAGTGGGATCGTAGAC+AGG | + | chr1.3:15123677-15123696 | MS.gene054153:CDS | 50.0% | |
| TCCGAGATTACGACTGCAAC+TGG | + | chr1.3:15123532-15123551 | MS.gene054153:CDS | 50.0% | |
| TTACGACTGCAACTGGAACG+TGG | + | chr1.3:15123539-15123558 | MS.gene054153:CDS | 50.0% | |
| TTTCCTGGTGCCTGAATCCT+AGG | - | chr1.3:15121752-15121771 | None:intergenic | 50.0% | |
| ! | ATCCTACAATGGTGGTGACC+AGG | + | chr1.3:15123332-15123351 | MS.gene054153:CDS | 50.0% |
| ! | GGCATTGGGGTGACAAGAAT+TGG | + | chr1.3:15123802-15123821 | MS.gene054153:CDS | 50.0% |
| ! | GTCTTGCTGCTTCAATCTGC+AGG | - | chr1.3:15121853-15121872 | None:intergenic | 50.0% |
| ! | TCCTACAATGGTGGTGACCA+GGG | + | chr1.3:15123333-15123352 | MS.gene054153:CDS | 50.0% |
| ! | TTTTATGGCTGCCGCAACTG+TGG | + | chr1.3:15122219-15122238 | MS.gene054153:intron | 50.0% |
| AAGCTTCCCTGCGACAAGTC+AGG | + | chr1.3:15121797-15121816 | MS.gene054153:CDS | 55.0% | |
| ACCCTGGTCACCACCATTGT+AGG | - | chr1.3:15123337-15123356 | None:intergenic | 55.0% | |
| AGCAGAAGGCAGCGTTAGAG+TGG | + | chr1.3:15123664-15123683 | MS.gene054153:CDS | 55.0% | |
| AGCTTCCCTGCGACAAGTCA+GGG | + | chr1.3:15121798-15121817 | MS.gene054153:CDS | 55.0% | |
| ATGTAGCTCATGCGAGGTGG+TGG | + | chr1.3:15123586-15123605 | MS.gene054153:CDS | 55.0% | |
| CAGGTCGGGTTCATAAAGCC+AGG | - | chr1.3:15121987-15122006 | None:intergenic | 55.0% | |
| CCGCAACTGTGGTTGTTGAC+CGG | + | chr1.3:15122230-15122249 | MS.gene054153:intron | 55.0% | |
| CCGGTCAACAACCACAGTTG+CGG | - | chr1.3:15122233-15122252 | None:intergenic | 55.0% | |
| CGAGCAATGTAGCTCATGCG+AGG | + | chr1.3:15123580-15123599 | MS.gene054153:CDS | 55.0% | |
| CTACCTAGGATTCAGGCACC+AGG | + | chr1.3:15121746-15121765 | MS.gene054153:CDS | 55.0% | |
| CTGGAACGTGGACATTCTGC+AGG | + | chr1.3:15123551-15123570 | MS.gene054153:CDS | 55.0% | |
| CTGGTACTAGCTGCTTCCAG+TGG | - | chr1.3:15121610-15121629 | None:intergenic | 55.0% | |
| GCAATGTAGCTCATGCGAGG+TGG | + | chr1.3:15123583-15123602 | MS.gene054153:CDS | 55.0% | |
| GCAGAAGGCAGCGTTAGAGT+GGG | + | chr1.3:15123665-15123684 | MS.gene054153:CDS | 55.0% | |
| ! | ACATTTCTGGGAAGGCGACG+AGG | + | chr1.3:15123416-15123435 | MS.gene054153:CDS | 55.0% |
| !! | AGCTCATGCGAGGTGGTGGA+AGG | + | chr1.3:15123590-15123609 | MS.gene054153:CDS | 60.0% |
| ! | AGGAGTGGCTTGGCAGCAGC+TGG | + | chr1.3:15123024-15123043 | MS.gene054153:CDS | 65.0% |
| ! | CAGCGCCCTGACTTGTCGCA+GGG | - | chr1.3:15121806-15121825 | None:intergenic | 65.0% |
| ! | GTGGCTTGGCAGCAGCTGGA+TGG | + | chr1.3:15123028-15123047 | MS.gene054153:CDS | 65.0% |
| ! | TGCAGCGTGACGGGAATGCC+TGG | + | chr1.3:15121966-15121985 | MS.gene054153:CDS | 65.0% |
| CCTGCGACAAGTCAGGGCGC+TGG | + | chr1.3:15121804-15121823 | MS.gene054153:CDS | 70.0% | |
| ! | CCAGCGCCCTGACTTGTCGC+AGG | - | chr1.3:15121807-15121826 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 15121413 | 15123893 | 15121413 | ID=MS.gene054153 |
| chr1.3 | mRNA | 15121413 | 15123893 | 15121413 | ID=MS.gene054153.t1;Parent=MS.gene054153 |
| chr1.3 | exon | 15121413 | 15122076 | 15121413 | ID=MS.gene054153.t1.exon1;Parent=MS.gene054153.t1 |
| chr1.3 | CDS | 15121413 | 15122076 | 15121413 | ID=cds.MS.gene054153.t1;Parent=MS.gene054153.t1 |
| chr1.3 | exon | 15122860 | 15123893 | 15122860 | ID=MS.gene054153.t1.exon2;Parent=MS.gene054153.t1 |
| chr1.3 | CDS | 15122860 | 15123893 | 15122860 | ID=cds.MS.gene054153.t1;Parent=MS.gene054153.t1 |
| Gene Sequence |
| Protein sequence |
