Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056236.t1 | RHN40290.1 | 95.1 | 526 | 25 | 1 | 1 | 525 | 1 | 526 | 8.50E-281 | 975.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056236.t1 | Q9SA38 | 45.6 | 513 | 268 | 4 | 1 | 506 | 1 | 509 | 2.8e-131 | 470.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056236.t1 | A0A396GH00 | 95.1 | 526 | 25 | 1 | 1 | 525 | 1 | 526 | 6.1e-281 | 975.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056236 | MS.gene062141 | 0.820615 | 6.25E-53 | -1.69E-46 |
| MS.gene056236 | MS.gene47723 | 0.807142 | 5.84E-50 | -1.69E-46 |
| MS.gene056236 | MS.gene48018 | 0.807516 | 4.87E-50 | -1.69E-46 |
| MS.gene056236 | MS.gene88499 | 0.902109 | 1.36E-78 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056236.t1 | MTR_8g039190 | 96.768 | 526 | 16 | 1 | 1 | 525 | 1 | 526 | 0.0 | 1034 |
| MS.gene056236.t1 | MTR_8g039070 | 90.304 | 526 | 14 | 3 | 1 | 525 | 1 | 490 | 0.0 | 943 |
| MS.gene056236.t1 | MTR_5g080050 | 87.048 | 525 | 61 | 4 | 1 | 520 | 1 | 523 | 0.0 | 914 |
| MS.gene056236.t1 | MTR_5g082760 | 83.271 | 532 | 75 | 3 | 1 | 518 | 1 | 532 | 0.0 | 885 |
| MS.gene056236.t1 | MTR_4g030040 | 71.285 | 498 | 138 | 3 | 11 | 507 | 12 | 505 | 0.0 | 721 |
| MS.gene056236.t1 | MTR_4g030040 | 70.259 | 501 | 142 | 3 | 8 | 507 | 10 | 504 | 0.0 | 717 |
| MS.gene056236.t1 | MTR_4g030210 | 71.486 | 498 | 137 | 2 | 11 | 507 | 16 | 509 | 0.0 | 713 |
| MS.gene056236.t1 | MTR_8g447340 | 42.802 | 514 | 280 | 5 | 12 | 514 | 15 | 525 | 1.35e-156 | 457 |
| MS.gene056236.t1 | MTR_2g081930 | 31.323 | 514 | 328 | 10 | 9 | 504 | 17 | 523 | 1.55e-76 | 250 |
| MS.gene056236.t1 | MTR_4g120720 | 38.361 | 305 | 149 | 5 | 77 | 377 | 2 | 271 | 7.60e-64 | 209 |
| MS.gene056236.t1 | MTR_2g081950 | 29.847 | 392 | 246 | 7 | 128 | 499 | 18 | 400 | 6.63e-47 | 169 |
| MS.gene056236.t1 | MTR_4g081490 | 29.082 | 392 | 252 | 7 | 129 | 507 | 66 | 444 | 6.18e-46 | 167 |
| MS.gene056236.t1 | MTR_2g081960 | 32.031 | 128 | 83 | 2 | 7 | 133 | 16 | 140 | 1.54e-16 | 77.0 |
| MS.gene056236.t1 | MTR_4g081480 | 29.365 | 126 | 81 | 2 | 10 | 130 | 23 | 145 | 1.11e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056236.t1 | AT1G16390 | 45.543 | 516 | 270 | 4 | 1 | 509 | 1 | 512 | 7.36e-171 | 493 |
| MS.gene056236.t1 | AT1G79360 | 47.887 | 497 | 246 | 8 | 24 | 507 | 19 | 515 | 1.55e-168 | 487 |
| MS.gene056236.t1 | AT1G16370 | 44.311 | 501 | 267 | 8 | 16 | 510 | 21 | 515 | 4.78e-148 | 435 |
| MS.gene056236.t1 | AT1G79410 | 43.217 | 516 | 280 | 8 | 1 | 510 | 1 | 509 | 1.10e-145 | 429 |
| MS.gene056236.t1 | AT1G73220 | 37.549 | 514 | 293 | 9 | 11 | 507 | 27 | 529 | 5.71e-102 | 317 |
| MS.gene056236.t1 | AT3G20660 | 30.214 | 513 | 328 | 8 | 8 | 507 | 19 | 514 | 2.44e-73 | 242 |
| MS.gene056236.t1 | AT3G51490 | 30.435 | 184 | 122 | 3 | 114 | 293 | 44 | 225 | 7.45e-14 | 74.7 |
| MS.gene056236.t1 | AT3G51490 | 30.435 | 184 | 122 | 3 | 114 | 293 | 44 | 225 | 8.55e-14 | 74.7 |
| MS.gene056236.t1 | AT3G51490 | 30.286 | 175 | 116 | 3 | 123 | 293 | 3 | 175 | 1.81e-13 | 73.6 |
| MS.gene056236.t1 | AT1G20840 | 26.250 | 160 | 107 | 2 | 141 | 293 | 68 | 223 | 1.95e-11 | 67.0 |
| MS.gene056236.t1 | AT1G20840 | 26.250 | 160 | 107 | 2 | 141 | 293 | 68 | 223 | 1.95e-11 | 67.0 |
Find 68 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACAATCTTCTTTCTTTAT+AGG | 0.092456 | 8.1:-65006886 | MS.gene056236:CDS |
| CCACTAGCTGTTGGAAATTT+AGG | 0.100486 | 8.1:-65006214 | MS.gene056236:CDS |
| TTCTTTATAGGTTGTCTTCT+TGG | 0.148431 | 8.1:-65006874 | MS.gene056236:CDS |
| TGAAATTCTTGATTGGTTTC+TGG | 0.164456 | 8.1:-65006720 | MS.gene056236:CDS |
| ATGATAGCTGTTATGATTCT+TGG | 0.200882 | 8.1:-65006268 | MS.gene056236:CDS |
| TTTAGGATTCAACATTTATT+TGG | 0.226455 | 8.1:-65006197 | MS.gene056236:CDS |
| ATTTCATCCCATGATAAAAT+TGG | 0.227150 | 8.1:+65007177 | None:intergenic |
| TTGTGTAGCAACATATTTCT+TGG | 0.258918 | 8.1:-65006140 | MS.gene056236:CDS |
| CAAAATGAACAATGTAAAAT+TGG | 0.272354 | 8.1:+65005796 | None:intergenic |
| TTGTGTGATGTGTGCTGTTT+TGG | 0.274294 | 8.1:-65006062 | MS.gene056236:CDS |
| CGTCCCCGCCGATATCAAAA+AGG | 0.281955 | 8.1:+65005868 | None:intergenic |
| GTAAACTCCCAAGATCTTCT+TGG | 0.282784 | 8.1:-65006987 | MS.gene056236:CDS |
| GAATTTGTGCAGTGCCATTT+TGG | 0.286472 | 8.1:+65007036 | None:intergenic |
| ACACTGATAATTATCCAAAA+TGG | 0.291848 | 8.1:-65007050 | MS.gene056236:CDS |
| ATTTACTCATATGGTGTGTT+TGG | 0.306270 | 8.1:-65005836 | MS.gene056236:CDS |
| TGCTCAATAGAATGAGATTC+AGG | 0.310523 | 8.1:+65007210 | None:intergenic |
| CCATTCAGCGCTAACTTTCT+CGG | 0.316763 | 8.1:+65006660 | None:intergenic |
| GCATTAGCTGATTCATCTAT+TGG | 0.326922 | 8.1:-65006835 | MS.gene056236:CDS |
| GCTGTTATGATTCTTGGAAT+TGG | 0.328512 | 8.1:-65006262 | MS.gene056236:CDS |
| TCCCAAGATCTTCTTGGTCT+TGG | 0.333286 | 8.1:-65006981 | MS.gene056236:CDS |
| TGTTGAAAAGATTATGAGTA+TGG | 0.334652 | 8.1:+65006765 | None:intergenic |
| TTTCAACTTTACTCATCAAT+AGG | 0.345221 | 8.1:-65006325 | MS.gene056236:CDS |
| CGTGGAAATCTCTTTACATA+TGG | 0.378297 | 8.1:-65006549 | MS.gene056236:CDS |
| CAAACACAATCATTTCTCAT+TGG | 0.381344 | 8.1:-65006945 | MS.gene056236:CDS |
| CCCAAGATCTTCTTGGTCTT+GGG | 0.388239 | 8.1:-65006980 | MS.gene056236:CDS |
| GAGAATTGTTTCATAAAAGA+TGG | 0.402166 | 8.1:-65006303 | MS.gene056236:CDS |
| GTGAGACAAGCTATTGTGTT+TGG | 0.405620 | 8.1:-65005905 | MS.gene056236:CDS |
| GAGATTTCCACGAAGAGTTT+CGG | 0.407414 | 8.1:+65006560 | None:intergenic |
| ATAGAAAACACAAGAATTGA+AGG | 0.420097 | 8.1:+65006100 | None:intergenic |
| TCCGCCATGAAATTCTTGAT+TGG | 0.434385 | 8.1:-65006727 | MS.gene056236:CDS |
| TCCCAAGACCAAGAAGATCT+TGG | 0.437312 | 8.1:+65006979 | None:intergenic |
| GGTTTCTGGCGTTCATCCAT+CGG | 0.444842 | 8.1:-65006706 | MS.gene056236:CDS |
| GAAACCAATCAAGAATTTCA+TGG | 0.462576 | 8.1:+65006723 | None:intergenic |
| CCGAGAAAGTTAGCGCTGAA+TGG | 0.463476 | 8.1:-65006660 | MS.gene056236:CDS |
| ATGATTCTTGGAATTGGACT+TGG | 0.469021 | 8.1:-65006256 | MS.gene056236:CDS |
| GTTTCTGGCGTTCATCCATC+GGG | 0.474990 | 8.1:-65006705 | MS.gene056236:CDS |
| CCCAAGACCAAGAAGATCTT+GGG | 0.475977 | 8.1:+65006980 | None:intergenic |
| TTCAGTATGCCACTAGCTGT+TGG | 0.483003 | 8.1:-65006223 | MS.gene056236:CDS |
| TGAGAAATGATTGTGTTTGA+AGG | 0.499350 | 8.1:+65006949 | None:intergenic |
| ATGGGGTACATGTCTTTACC+TGG | 0.502965 | 8.1:-65006598 | MS.gene056236:CDS |
| AGAACAATCCCTATAGTCTC+TGG | 0.504851 | 8.1:+65005773 | None:intergenic |
| GCTAAAACCACTTTAACAGC+TGG | 0.508902 | 8.1:+65006028 | None:intergenic |
| ATATTAACCGAAACTCTTCG+TGG | 0.514113 | 8.1:-65006567 | MS.gene056236:CDS |
| GATTGTTCTTTGTGATACAA+TGG | 0.520244 | 8.1:-65005759 | MS.gene056236:CDS |
| TAGAGTACCAGCTGTTAAAG+TGG | 0.523530 | 8.1:-65006035 | MS.gene056236:CDS |
| TCTTGGAATTGGACTTGGAA+TGG | 0.524447 | 8.1:-65006251 | MS.gene056236:CDS |
| AGAATTGTTTCATAAAAGAT+GGG | 0.525041 | 8.1:-65006302 | MS.gene056236:CDS |
| CCTAAATTTCCAACAGCTAG+TGG | 0.527532 | 8.1:+65006214 | None:intergenic |
| AAATATGTTGCTACACAAGA+AGG | 0.528534 | 8.1:+65006145 | None:intergenic |
| GCTGAATGGCGGTTTAGAGT+TGG | 0.556204 | 8.1:-65006646 | MS.gene056236:CDS |
| TGTGCTAGCACATTCATCAC+TGG | 0.561957 | 8.1:-65006913 | MS.gene056236:CDS |
| GAGAAATGATTGTGTTTGAA+GGG | 0.574527 | 8.1:+65006950 | None:intergenic |
| TCTTTGTTACCGAGTCGCCT+AGG | 0.584227 | 8.1:-65006486 | MS.gene056236:CDS |
| ATGACAGAGTAACATATAGC+AGG | 0.585106 | 8.1:+65006517 | None:intergenic |
| CGGTTAATATAAGCGAAACC+AGG | 0.588496 | 8.1:+65006580 | None:intergenic |
| AACAAGCCACCTAGGCGACT+CGG | 0.591181 | 8.1:+65006477 | None:intergenic |
| CCTAGGTGGCTTGTTATGCA+AGG | 0.598767 | 8.1:-65006469 | MS.gene056236:CDS |
| AGTTTACAAATATCAGAGGA+TGG | 0.609310 | 8.1:+65007003 | None:intergenic |
| AACAAGAACACATGTCCCGA+TGG | 0.611953 | 8.1:+65006690 | None:intergenic |
| TGGGAGTTTACAAATATCAG+AGG | 0.623076 | 8.1:+65006999 | None:intergenic |
| GAGGAACACAACAACGTCGT+TGG | 0.627045 | 8.1:-65005927 | MS.gene056236:CDS |
| CCTATAAAGAAAGAAGATTG+TGG | 0.630632 | 8.1:+65006886 | None:intergenic |
| GTTGTGTTCCTCACACATGT+CGG | 0.637523 | 8.1:+65005938 | None:intergenic |
| CCTTGCATAACAAGCCACCT+AGG | 0.639898 | 8.1:+65006469 | None:intergenic |
| AGTTGTTTCCGACATGTGTG+AGG | 0.640373 | 8.1:-65005946 | MS.gene056236:CDS |
| AGAAAGTTAGCGCTGAATGG+CGG | 0.664310 | 8.1:-65006657 | MS.gene056236:CDS |
| TTGTTACCGAGTCGCCTAGG+TGG | 0.668506 | 8.1:-65006483 | MS.gene056236:CDS |
| ACCAATCAAGAATTTCATGG+CGG | 0.740665 | 8.1:+65006726 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAGTTTATCAAATTTT+GGG | - | chr8.1:65005770-65005789 | MS.gene056236:CDS | 10.0% |
| !! | AAAAACAATATTTACTCATA+TGG | - | chr8.1:65007074-65007093 | MS.gene056236:CDS | 15.0% |
| !!! | AAAAATGAAACTTTTTCTTT+TGG | + | chr8.1:65006576-65006595 | None:intergenic | 15.0% |
| !!! | AAAATGAAACTTTTTCTTTT+GGG | + | chr8.1:65006575-65006594 | None:intergenic | 15.0% |
| !!! | GAAAAAAGTTTATCAAATTT+TGG | - | chr8.1:65005769-65005788 | MS.gene056236:CDS | 15.0% |
| !! | AGAATTGTTTCATAAAAGAT+GGG | - | chr8.1:65006617-65006636 | MS.gene056236:CDS | 20.0% |
| !! | CAAAATGAACAATGTAAAAT+TGG | + | chr8.1:65007126-65007145 | None:intergenic | 20.0% |
| !!! | AAAAGAAACCAATTTTATCA+TGG | - | chr8.1:65005734-65005753 | MS.gene056236:CDS | 20.0% |
| !!! | AAAGAAACCAATTTTATCAT+GGG | - | chr8.1:65005735-65005754 | MS.gene056236:CDS | 20.0% |
| !!! | AAATGAAACTTTTTCTTTTG+GGG | + | chr8.1:65006574-65006593 | None:intergenic | 20.0% |
| !!! | TAATCTTTTCAACAAATGTT+TGG | - | chr8.1:65006163-65006182 | MS.gene056236:CDS | 20.0% |
| !!! | TTTAGGATTCAACATTTATT+TGG | - | chr8.1:65006722-65006741 | MS.gene056236:CDS | 20.0% |
| ! | ACACTGATAATTATCCAAAA+TGG | - | chr8.1:65005869-65005888 | MS.gene056236:CDS | 25.0% |
| ! | ATAGAAAACACAAGAATTGA+AGG | + | chr8.1:65006822-65006841 | None:intergenic | 25.0% |
| ! | ATGAATCAACATGAAAAAAC+AGG | - | chr8.1:65007221-65007240 | MS.gene056236:CDS | 25.0% |
| ! | ATTTCATCCCATGATAAAAT+TGG | + | chr8.1:65005745-65005764 | None:intergenic | 25.0% |
| ! | GAGAATTGTTTCATAAAAGA+TGG | - | chr8.1:65006616-65006635 | MS.gene056236:CDS | 25.0% |
| ! | TGTTGAAAAGATTATGAGTA+TGG | + | chr8.1:65006157-65006176 | None:intergenic | 25.0% |
| ! | TTTCAACTTTACTCATCAAT+AGG | - | chr8.1:65006594-65006613 | MS.gene056236:CDS | 25.0% |
| !! | AAAGTTTATCAAATTTTGGG+TGG | - | chr8.1:65005773-65005792 | MS.gene056236:CDS | 25.0% |
| !! | AGTATTTTACTTTCACAATG+GGG | - | chr8.1:65006304-65006323 | MS.gene056236:CDS | 25.0% |
| !! | ATTCTTGTGTTTTCTATCTT+AGG | - | chr8.1:65006825-65006844 | MS.gene056236:CDS | 25.0% |
| !! | GAGTATTTTACTTTCACAAT+GGG | - | chr8.1:65006303-65006322 | MS.gene056236:CDS | 25.0% |
| !! | TGAGTATTTTACTTTCACAA+TGG | - | chr8.1:65006302-65006321 | MS.gene056236:CDS | 25.0% |
| !!! | AATGAAACTTTTTCTTTTGG+GGG | + | chr8.1:65006573-65006592 | None:intergenic | 25.0% |
| !!! | TGTTTTTTCATGTTGATTCA+TGG | + | chr8.1:65007222-65007241 | None:intergenic | 25.0% |
| AAATATGTTGCTACACAAGA+AGG | + | chr8.1:65006777-65006796 | None:intergenic | 30.0% | |
| AGTTTACAAATATCAGAGGA+TGG | + | chr8.1:65005919-65005938 | None:intergenic | 30.0% | |
| ATGATAGCTGTTATGATTCT+TGG | - | chr8.1:65006651-65006670 | MS.gene056236:CDS | 30.0% | |
| ATTTACTCATATGGTGTGTT+TGG | - | chr8.1:65007083-65007102 | MS.gene056236:CDS | 30.0% | |
| CAAACACAATCATTTCTCAT+TGG | - | chr8.1:65005974-65005993 | MS.gene056236:CDS | 30.0% | |
| CCACAATCTTCTTTCTTTAT+AGG | - | chr8.1:65006033-65006052 | MS.gene056236:CDS | 30.0% | |
| CCTATAAAGAAAGAAGATTG+TGG | + | chr8.1:65006036-65006055 | None:intergenic | 30.0% | |
| GAAACCAATCAAGAATTTCA+TGG | + | chr8.1:65006199-65006218 | None:intergenic | 30.0% | |
| GAGAAATGATTGTGTTTGAA+GGG | + | chr8.1:65005972-65005991 | None:intergenic | 30.0% | |
| GATTGTTCTTTGTGATACAA+TGG | - | chr8.1:65007160-65007179 | MS.gene056236:CDS | 30.0% | |
| TGAGAAATGATTGTGTTTGA+AGG | + | chr8.1:65005973-65005992 | None:intergenic | 30.0% | |
| TTCTTTATAGGTTGTCTTCT+TGG | - | chr8.1:65006045-65006064 | MS.gene056236:CDS | 30.0% | |
| TTGTGTAGCAACATATTTCT+TGG | - | chr8.1:65006779-65006798 | MS.gene056236:CDS | 30.0% | |
| ! | ATTCTGTCCCTTTTTGATAT+CGG | - | chr8.1:65007043-65007062 | MS.gene056236:CDS | 30.0% |
| ! | TTAGCAATGGTTGCATTTTT+CGG | - | chr8.1:65006909-65006928 | MS.gene056236:CDS | 30.0% |
| !! | TGAAATTCTTGATTGGTTTC+TGG | - | chr8.1:65006199-65006218 | MS.gene056236:CDS | 30.0% |
| !! | TTTATCAAATTTTGGGTGGA+TGG | - | chr8.1:65005777-65005796 | MS.gene056236:CDS | 30.0% |
| !!! | AGTAGTTTTTAGTGCTTCAA+TGG | - | chr8.1:65006746-65006765 | MS.gene056236:CDS | 30.0% |
| !!! | TGTTAAAGTGGTTTTAGCAA+TGG | - | chr8.1:65006896-65006915 | MS.gene056236:CDS | 30.0% |
| ACCAATCAAGAATTTCATGG+CGG | + | chr8.1:65006196-65006215 | None:intergenic | 35.0% | |
| ATATTAACCGAAACTCTTCG+TGG | - | chr8.1:65006352-65006371 | MS.gene056236:CDS | 35.0% | |
| ATGACAGAGTAACATATAGC+AGG | + | chr8.1:65006405-65006424 | None:intergenic | 35.0% | |
| ATGATTCTTGGAATTGGACT+TGG | - | chr8.1:65006663-65006682 | MS.gene056236:CDS | 35.0% | |
| CGTGGAAATCTCTTTACATA+TGG | - | chr8.1:65006370-65006389 | MS.gene056236:CDS | 35.0% | |
| GCTGTTATGATTCTTGGAAT+TGG | - | chr8.1:65006657-65006676 | MS.gene056236:CDS | 35.0% | |
| TGCTCAATAGAATGAGATTC+AGG | + | chr8.1:65005712-65005731 | None:intergenic | 35.0% | |
| TGGGAGTTTACAAATATCAG+AGG | + | chr8.1:65005923-65005942 | None:intergenic | 35.0% | |
| ! | CTTGTGTTTTCTATCTTAGG+TGG | - | chr8.1:65006828-65006847 | MS.gene056236:CDS | 35.0% |
| ! | GCATTAGCTGATTCATCTAT+TGG | - | chr8.1:65006084-65006103 | MS.gene056236:CDS | 35.0% |
| ! | TCATTTTGCCAGAGACTATA+GGG | - | chr8.1:65007138-65007157 | MS.gene056236:CDS | 35.0% |
| ! | TTCATTTTGCCAGAGACTAT+AGG | - | chr8.1:65007137-65007156 | MS.gene056236:CDS | 35.0% |
| AGAACAATCCCTATAGTCTC+TGG | + | chr8.1:65007149-65007168 | None:intergenic | 40.0% | |
| CCACTAGCTGTTGGAAATTT+AGG | - | chr8.1:65006705-65006724 | MS.gene056236:CDS | 40.0% | |
| CCTAAATTTCCAACAGCTAG+TGG | + | chr8.1:65006708-65006727 | None:intergenic | 40.0% | |
| CGGTTAATATAAGCGAAACC+AGG | + | chr8.1:65006342-65006361 | None:intergenic | 40.0% | |
| GAGATTTCCACGAAGAGTTT+CGG | + | chr8.1:65006362-65006381 | None:intergenic | 40.0% | |
| GCTAAAACCACTTTAACAGC+TGG | + | chr8.1:65006894-65006913 | None:intergenic | 40.0% | |
| GTAAACTCCCAAGATCTTCT+TGG | - | chr8.1:65005932-65005951 | MS.gene056236:CDS | 40.0% | |
| GTGAGACAAGCTATTGTGTT+TGG | - | chr8.1:65007014-65007033 | MS.gene056236:CDS | 40.0% | |
| TCCGCCATGAAATTCTTGAT+TGG | - | chr8.1:65006192-65006211 | MS.gene056236:CDS | 40.0% | |
| TCTTGGAATTGGACTTGGAA+TGG | - | chr8.1:65006668-65006687 | MS.gene056236:CDS | 40.0% | |
| ! | TAGAGTACCAGCTGTTAAAG+TGG | - | chr8.1:65006884-65006903 | MS.gene056236:CDS | 40.0% |
| !! | TTTTCTTTTGGGGGCAGTTT+TGG | + | chr8.1:65006564-65006583 | None:intergenic | 40.0% |
| !!! | GAATTTGTGCAGTGCCATTT+TGG | + | chr8.1:65005886-65005905 | None:intergenic | 40.0% |
| !!! | TTGTGTGATGTGTGCTGTTT+TGG | - | chr8.1:65006857-65006876 | MS.gene056236:CDS | 40.0% |
| AACAAGAACACATGTCCCGA+TGG | + | chr8.1:65006232-65006251 | None:intergenic | 45.0% | |
| ATGGGGTACATGTCTTTACC+TGG | - | chr8.1:65006321-65006340 | MS.gene056236:CDS | 45.0% | |
| CCATTCAGCGCTAACTTTCT+CGG | + | chr8.1:65006262-65006281 | None:intergenic | 45.0% | |
| CCCAAGACCAAGAAGATCTT+GGG | + | chr8.1:65005942-65005961 | None:intergenic | 45.0% | |
| GTTGTGTTCCTCACACATGT+CGG | + | chr8.1:65006984-65007003 | None:intergenic | 45.0% | |
| TCCCAAGACCAAGAAGATCT+TGG | + | chr8.1:65005943-65005962 | None:intergenic | 45.0% | |
| TCCCAAGATCTTCTTGGTCT+TGG | - | chr8.1:65005938-65005957 | MS.gene056236:CDS | 45.0% | |
| TGTGCTAGCACATTCATCAC+TGG | - | chr8.1:65006006-65006025 | MS.gene056236:CDS | 45.0% | |
| TTCAGTATGCCACTAGCTGT+TGG | - | chr8.1:65006696-65006715 | MS.gene056236:CDS | 45.0% | |
| ! | AGAAAGTTAGCGCTGAATGG+CGG | - | chr8.1:65006262-65006281 | MS.gene056236:CDS | 45.0% |
| ! | AGTTGTTTCCGACATGTGTG+AGG | - | chr8.1:65006973-65006992 | MS.gene056236:CDS | 45.0% |
| ! | CCCAAGATCTTCTTGGTCTT+GGG | - | chr8.1:65005939-65005958 | MS.gene056236:CDS | 45.0% |
| ! | CTGTCCCTTTTTGATATCGG+CGG | - | chr8.1:65007046-65007065 | MS.gene056236:CDS | 45.0% |
| ! | TGTCCCTTTTTGATATCGGC+GGG | - | chr8.1:65007047-65007066 | MS.gene056236:CDS | 45.0% |
| !! | TGCATTTTTCGGCGCTTGTA+CGG | - | chr8.1:65006920-65006939 | MS.gene056236:CDS | 45.0% |
| CCTTGCATAACAAGCCACCT+AGG | + | chr8.1:65006453-65006472 | None:intergenic | 50.0% | |
| GAGGAACACAACAACGTCGT+TGG | - | chr8.1:65006992-65007011 | MS.gene056236:CDS | 50.0% | |
| GTCCCCGCCGATATCAAAAA+GGG | + | chr8.1:65007053-65007072 | None:intergenic | 50.0% | |
| TCTTTGTTACCGAGTCGCCT+AGG | - | chr8.1:65006433-65006452 | MS.gene056236:CDS | 50.0% | |
| ! | CCGAGAAAGTTAGCGCTGAA+TGG | - | chr8.1:65006259-65006278 | MS.gene056236:CDS | 50.0% |
| ! | GCTGAATGGCGGTTTAGAGT+TGG | - | chr8.1:65006273-65006292 | MS.gene056236:CDS | 50.0% |
| ! | GTCCCTTTTTGATATCGGCG+GGG | - | chr8.1:65007048-65007067 | MS.gene056236:CDS | 50.0% |
| !! | CCTAGGTGGCTTGTTATGCA+AGG | - | chr8.1:65006450-65006469 | MS.gene056236:CDS | 50.0% |
| !! | GGTTTCTGGCGTTCATCCAT+CGG | - | chr8.1:65006213-65006232 | MS.gene056236:CDS | 50.0% |
| !! | GTTTCTGGCGTTCATCCATC+GGG | - | chr8.1:65006214-65006233 | MS.gene056236:CDS | 50.0% |
| AACAAGCCACCTAGGCGACT+CGG | + | chr8.1:65006445-65006464 | None:intergenic | 55.0% | |
| CGTCCCCGCCGATATCAAAA+AGG | + | chr8.1:65007054-65007073 | None:intergenic | 55.0% | |
| TTGTTACCGAGTCGCCTAGG+TGG | - | chr8.1:65006436-65006455 | MS.gene056236:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 65005682 | 65007259 | 65005682 | ID=MS.gene056236 |
| chr8.1 | mRNA | 65005682 | 65007259 | 65005682 | ID=MS.gene056236.t1;Parent=MS.gene056236 |
| chr8.1 | exon | 65005682 | 65007259 | 65005682 | ID=MS.gene056236.t1.exon1;Parent=MS.gene056236.t1 |
| chr8.1 | CDS | 65005682 | 65007259 | 65005682 | ID=cds.MS.gene056236.t1;Parent=MS.gene056236.t1 |
| Gene Sequence |
| Protein sequence |
