Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48018.t1 | AIT98180.1 | 99.7 | 359 | 1 | 0 | 1 | 359 | 30 | 388 | 1.40E-205 | 725.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48018.t1 | Q9SSU8 | 76.3 | 350 | 72 | 1 | 12 | 350 | 45 | 394 | 2.5e-155 | 549.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48018.t1 | A0A097KXR7 | 99.7 | 359 | 1 | 0 | 1 | 359 | 30 | 388 | 9.9e-206 | 725.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049369 | MS.gene48018 | 0.821547 | 3.81E-53 | -1.69E-46 |
| MS.gene049396 | MS.gene48018 | 0.824327 | 8.57E-54 | -1.69E-46 |
| MS.gene05505 | MS.gene48018 | 0.805567 | 1.25E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene48018 | 0.828902 | 6.94E-55 | -1.69E-46 |
| MS.gene056236 | MS.gene48018 | 0.807516 | 4.87E-50 | -1.69E-46 |
| MS.gene056422 | MS.gene48018 | 0.818025 | 2.43E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene48018 | 0.803607 | 3.22E-49 | -1.69E-46 |
| MS.gene057668 | MS.gene48018 | 0.817025 | 4.08E-52 | -1.69E-46 |
| MS.gene057926 | MS.gene48018 | 0.840477 | 8.49E-58 | -1.69E-46 |
| MS.gene058075 | MS.gene48018 | 0.830449 | 2.92E-55 | -1.69E-46 |
| MS.gene058459 | MS.gene48018 | 0.832486 | 9.20E-56 | -1.69E-46 |
| MS.gene059711 | MS.gene48018 | 0.850658 | 1.47E-60 | -1.69E-46 |
| MS.gene059807 | MS.gene48018 | 0.81521 | 1.04E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene48018 | 0.812763 | 3.60E-51 | -1.69E-46 |
| MS.gene060818 | MS.gene48018 | 0.816555 | 5.21E-52 | -1.69E-46 |
| MS.gene061041 | MS.gene48018 | 0.82907 | 6.32E-55 | -1.69E-46 |
| MS.gene061134 | MS.gene48018 | 0.824739 | 6.86E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48018.t1 | MTR_5g090780 | 96.657 | 359 | 12 | 0 | 1 | 359 | 30 | 388 | 0.0 | 724 |
| MS.gene48018.t1 | MTR_3g450510 | 85.083 | 362 | 46 | 2 | 3 | 359 | 37 | 395 | 0.0 | 635 |
| MS.gene48018.t1 | MTR_5g076620 | 75.740 | 338 | 78 | 2 | 16 | 352 | 95 | 429 | 0.0 | 535 |
| MS.gene48018.t1 | MTR_5g076620 | 75.779 | 289 | 66 | 2 | 15 | 302 | 94 | 379 | 2.18e-161 | 457 |
| MS.gene48018.t1 | MTR_3g083630 | 64.634 | 328 | 108 | 2 | 24 | 351 | 57 | 376 | 9.30e-156 | 443 |
| MS.gene48018.t1 | MTR_3g083650 | 61.972 | 71 | 27 | 0 | 88 | 158 | 1 | 71 | 2.77e-25 | 97.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48018.t1 | AT5G17230 | 77.233 | 347 | 68 | 3 | 10 | 348 | 70 | 413 | 0.0 | 552 |
| MS.gene48018.t1 | AT5G17230 | 77.233 | 347 | 68 | 3 | 10 | 348 | 70 | 413 | 0.0 | 552 |
| MS.gene48018.t1 | AT5G17230 | 77.233 | 347 | 68 | 3 | 10 | 348 | 70 | 413 | 0.0 | 552 |
| MS.gene48018.t1 | AT5G17230 | 74.033 | 362 | 68 | 4 | 10 | 348 | 70 | 428 | 0.0 | 542 |
Find 75 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATAATAACTTCACAAAA+AGG | 0.232010 | 5.2:-76785014 | MS.gene48018:CDS |
| GCATCATCTCATAAACAATT+TGG | 0.245018 | 5.2:+76784912 | None:intergenic |
| CTTTATTGTTACTATGTTGC+TGG | 0.254005 | 5.2:-76786669 | MS.gene48018:CDS |
| TCATGAAGGGACAAATAAAA+AGG | 0.256763 | 5.2:-76785158 | MS.gene48018:CDS |
| TCTGTAGAAGCCTTGGATTC+AGG | 0.303642 | 5.2:+76786606 | None:intergenic |
| TAAGTACCCTGTTGATATTC+AGG | 0.310562 | 5.2:-76787334 | MS.gene48018:intron |
| AAGAACGCCGAAAAGCTATA+TGG | 0.335633 | 5.2:-76787654 | MS.gene48018:CDS |
| TGTGAAGTTATTATAATCAT+TGG | 0.341584 | 5.2:+76785020 | None:intergenic |
| TTATCACTACCAGCTGCTTA+TGG | 0.342219 | 5.2:-76784964 | MS.gene48018:CDS |
| TCAGGTGCTATTCCCATTAC+AGG | 0.342367 | 5.2:+76786624 | None:intergenic |
| TCCAACATCTCTGAGTATAT+TGG | 0.357053 | 5.2:+76786536 | None:intergenic |
| GTTCTTTGATGAAGCAGAAA+AGG | 0.373517 | 5.2:-76785127 | MS.gene48018:CDS |
| CTCTCCTCTGAACTTCTTGA+AGG | 0.380334 | 5.2:+76789511 | None:intergenic |
| AGAGTGTAAGAATGGGTTCT+AGG | 0.388815 | 5.2:-76789570 | None:intergenic |
| AAAGCTATATGGGCAATCTA+TGG | 0.391917 | 5.2:-76787643 | MS.gene48018:intron |
| GTGTGATGTGTGAAGCATTT+GGG | 0.394039 | 5.2:+76787451 | None:intergenic |
| CCATTCAAGGACATGATAGA+AGG | 0.398564 | 5.2:-76786744 | MS.gene48018:CDS |
| GGGCAGCATTGTTGTTATAT+AGG | 0.404583 | 5.2:-76785065 | MS.gene48018:CDS |
| TGAAGTACCTGAATATCAAC+AGG | 0.410981 | 5.2:+76787327 | None:intergenic |
| GGTGTGATGTGTGAAGCATT+TGG | 0.411963 | 5.2:+76787450 | None:intergenic |
| ATGGGTTCTAGGATAAGGTT+TGG | 0.418446 | 5.2:-76789559 | MS.gene48018:CDS |
| TAAGAATGGGTTCTAGGATA+AGG | 0.419173 | 5.2:-76789564 | None:intergenic |
| TCCCATCTGTCCAAGGCTGC+TGG | 0.419670 | 5.2:+76787429 | None:intergenic |
| CTTATGAGTGTTCCTGTAAT+GGG | 0.421342 | 5.2:-76786636 | MS.gene48018:CDS |
| GCATAATGTCTTCATCTGAT+AGG | 0.425370 | 5.2:+76785211 | None:intergenic |
| TTTATTGTTACTATGTTGCT+GGG | 0.438390 | 5.2:-76786668 | MS.gene48018:CDS |
| TAGGATAAGGTTTGGAAGTG+GGG | 0.438574 | 5.2:-76789551 | MS.gene48018:CDS |
| AGCTCAGTTCTGCTAGTAGA+TGG | 0.444906 | 5.2:-76785095 | MS.gene48018:CDS |
| CTAGGATAAGGTTTGGAAGT+GGG | 0.447585 | 5.2:-76789552 | MS.gene48018:CDS |
| TCTTATGAGTGTTCCTGTAA+TGG | 0.447627 | 5.2:-76786637 | MS.gene48018:CDS |
| CAGCAACATAGTAACAATAA+AGG | 0.448850 | 5.2:+76786670 | None:intergenic |
| GCAGCATCAAACATATCATA+TGG | 0.464921 | 5.2:+76787375 | None:intergenic |
| TTATTTGAAATAGCCATTCA+AGG | 0.465866 | 5.2:-76786757 | MS.gene48018:intron |
| CCTTCTATCATGTCCTTGAA+TGG | 0.471429 | 5.2:+76786744 | None:intergenic |
| CACCAGCAGCCTTGGACAGA+TGG | 0.481447 | 5.2:-76787431 | MS.gene48018:CDS |
| TTTGGTGAGAGAAGATAGGA+GGG | 0.481973 | 5.2:-76789458 | MS.gene48018:CDS |
| AATGCTCTCTGTAGAAGCCT+TGG | 0.487506 | 5.2:+76786599 | None:intergenic |
| TTCTTTGATGAAGCAGAAAA+GGG | 0.493216 | 5.2:-76785126 | MS.gene48018:CDS |
| TGCTAGTAGATGGCCTGTGT+GGG | 0.498713 | 5.2:-76785085 | MS.gene48018:CDS |
| AGAACGCCGAAAAGCTATAT+GGG | 0.501743 | 5.2:-76787653 | MS.gene48018:CDS |
| ACACATCACACCAGCAGCCT+TGG | 0.504549 | 5.2:-76787439 | MS.gene48018:CDS |
| TCTAGGATAAGGTTTGGAAG+TGG | 0.507067 | 5.2:-76789553 | MS.gene48018:CDS |
| AGAACTGATGAACTAGTAGA+TGG | 0.508686 | 5.2:-76787474 | MS.gene48018:CDS |
| GAGCATTTATAATGCTGCAT+TGG | 0.509388 | 5.2:-76786583 | MS.gene48018:CDS |
| CATGATAGAAGGGATGAGGA+TGG | 0.512203 | 5.2:-76786733 | MS.gene48018:CDS |
| TTCAAGAAGTTCAGAGGAGA+GGG | 0.515940 | 5.2:-76789509 | MS.gene48018:CDS |
| TATAATGCTGCATTGGCACT+AGG | 0.516591 | 5.2:-76786576 | MS.gene48018:CDS |
| TATTGAATTCTGCTTATGAT+CGG | 0.518807 | 5.2:-76789375 | MS.gene48018:CDS |
| TACTATGTTGCTGGGACAGT+AGG | 0.527506 | 5.2:-76786660 | MS.gene48018:CDS |
| ACCAATATACTCAGAGATGT+TGG | 0.528223 | 5.2:-76786537 | MS.gene48018:CDS |
| CTTGTGCTAGCTCATCTTGA+GGG | 0.529549 | 5.2:+76785238 | None:intergenic |
| ACCAGCAGCCTTGGACAGAT+GGG | 0.533995 | 5.2:-76787430 | MS.gene48018:CDS |
| CAGGTTTGGTGAGAGAAGAT+AGG | 0.541572 | 5.2:-76789462 | MS.gene48018:CDS |
| GTTTGGTGAGAGAAGATAGG+AGG | 0.542876 | 5.2:-76789459 | MS.gene48018:CDS |
| GTGGAAAAGTAACAGACAAA+TGG | 0.545459 | 5.2:-76785188 | MS.gene48018:CDS |
| CAAGATGAGCTAGCACAAGC+TGG | 0.546911 | 5.2:-76785234 | MS.gene48018:CDS |
| CATTCAAGGACATGATAGAA+GGG | 0.552755 | 5.2:-76786743 | MS.gene48018:CDS |
| CTGCTAGTAGATGGCCTGTG+TGG | 0.559580 | 5.2:-76785086 | MS.gene48018:CDS |
| GGGAATAGCACCTGAATCCA+AGG | 0.561665 | 5.2:-76786616 | MS.gene48018:CDS |
| CAAATGGAGAAATTTCATGA+AGG | 0.564295 | 5.2:-76785172 | MS.gene48018:CDS |
| AGGACATGATAGAAGGGATG+AGG | 0.567252 | 5.2:-76786737 | MS.gene48018:CDS |
| CCGTTGCTCCCATCTGTCCA+AGG | 0.572170 | 5.2:+76787422 | None:intergenic |
| GCTTGTGCTAGCTCATCTTG+AGG | 0.572873 | 5.2:+76785237 | None:intergenic |
| GATTATGATAGTGCTAGAAG+AGG | 0.580690 | 5.2:-76785273 | MS.gene48018:intron |
| AAATGGAGAAATTTCATGAA+GGG | 0.583483 | 5.2:-76785171 | MS.gene48018:CDS |
| AGGATAAGGTTTGGAAGTGG+GGG | 0.586634 | 5.2:-76789550 | MS.gene48018:CDS |
| AGTGCAGTTCCATAAGCAGC+TGG | 0.587800 | 5.2:+76784955 | None:intergenic |
| CTTCAAGAAGTTCAGAGGAG+AGG | 0.613107 | 5.2:-76789510 | MS.gene48018:CDS |
| AGAACCTTCAAGAAGTTCAG+AGG | 0.614687 | 5.2:-76789515 | MS.gene48018:CDS |
| CCTTGGACAGATGGGAGCAA+CGG | 0.633759 | 5.2:-76787422 | MS.gene48018:CDS |
| AACAACAATGCTGCCCACAC+AGG | 0.638058 | 5.2:+76785072 | None:intergenic |
| TCAGATGAAGACATTATGCG+TGG | 0.650440 | 5.2:-76785207 | MS.gene48018:CDS |
| TTGGTGAGAGAAGATAGGAG+GGG | 0.683654 | 5.2:-76789457 | MS.gene48018:CDS |
| AATTCTGCTTATGATCGGTG+TGG | 0.729934 | 5.2:-76789370 | MS.gene48018:CDS |
| GAAGTACCTGAATATCAACA+GGG | 0.777322 | 5.2:+76787328 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAATTATAAAAAAAAAA+GGG | + | chr5.2:76788976-76788995 | None:intergenic | 0.0% |
| !! | ATAACAATAGTTAAATAAAA+AGG | - | chr5.2:76788342-76788361 | MS.gene48018:intron | 10.0% |
| !!! | ATTTCTCTTTTTATTTAATA+CGG | - | chr5.2:76788164-76788183 | MS.gene48018:intron | 10.0% |
| !!! | ATTTCTTTTTTCTTTTTTTT+TGG | - | chr5.2:76785194-76785213 | MS.gene48018:CDS | 10.0% |
| !!! | GAATGTTATTTTTATTTTTT+TGG | + | chr5.2:76786908-76786927 | None:intergenic | 10.0% |
| !!! | TTAAAAGTTTTTTTAGTTTT+TGG | + | chr5.2:76787359-76787378 | None:intergenic | 10.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | + | chr5.2:76788921-76788902 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | - | chr5.2:76788710-76788729 | MS.gene48018:intron | 15.0% |
| !! | ATTATAATAACTTCACAAAA+AGG | - | chr5.2:76789460-76789479 | MS.gene48018:CDS | 15.0% |
| !! | GATTAAATTCAATTGAATAT+TGG | + | chr5.2:76785263-76785282 | None:intergenic | 15.0% |
| !! | TTATAATAACTTCACAAAAA+GGG | - | chr5.2:76789461-76789480 | MS.gene48018:CDS | 15.0% |
| !!! | AAATATTTTGTTGTGTTTAA+TGG | + | chr5.2:76785961-76785980 | None:intergenic | 15.0% |
| !!! | AATAATGTATTTTGATGTTA+GGG | - | chr5.2:76786644-76786663 | MS.gene48018:CDS | 15.0% |
| !!! | AATACCCTTATTTTATTTTT+TGG | + | chr5.2:76786441-76786460 | None:intergenic | 15.0% |
| !!! | GAAAAAATAAACATTTTCAA+TGG | + | chr5.2:76785783-76785802 | None:intergenic | 15.0% |
| !!! | TATACAATTGAAAAAGTATA+AGG | + | chr5.2:76786257-76786276 | None:intergenic | 15.0% |
| !!! | TTATTTTACACTTAATTGAA+TGG | - | chr5.2:76785473-76785492 | MS.gene48018:intron | 15.0% |
| !!! | TTGAAATAGTATATAGTTTT+TGG | + | chr5.2:76788006-76788025 | None:intergenic | 15.0% |
| !!! | TTTCTCTTTTTATTTAATAC+GGG | - | chr5.2:76788165-76788184 | MS.gene48018:intron | 15.0% |
| !!! | TTTTTTCATCCAAAAAATAA+TGG | + | chr5.2:76786286-76786305 | None:intergenic | 15.0% |
| !! | AAAATTGATCTTATTGACAT+TGG | - | chr5.2:76787689-76787708 | MS.gene48018:intron | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | - | chr5.2:76788840-76788859 | MS.gene48018:intron | 20.0% |
| !! | AAACATCAAATAAAAAGGAA+TGG | - | chr5.2:76786524-76786543 | MS.gene48018:intron | 20.0% |
| !! | AAACATCAAATAAAAAGGAA+TGG | + | chr5.2:76786543-76786524 | None:intergenic | 20.0% |
| !! | AATGAAAATAGTTGTAGATT+TGG | + | chr5.2:76786469-76786488 | None:intergenic | 20.0% |
| !! | AATTCCAAACCAAAAAAAAA+AGG | + | chr5.2:76786946-76786965 | None:intergenic | 20.0% |
| !! | ACATCAAAATACATTATTGA+AGG | + | chr5.2:76786642-76786661 | None:intergenic | 20.0% |
| !! | AGCTAAAACATCAAATAAAA+AGG | - | chr5.2:76786519-76786538 | MS.gene48018:intron | 20.0% |
| !! | AGCTAAAACATCAAATAAAA+AGG | + | chr5.2:76786538-76786519 | None:intergenic | 20.0% |
| !! | ATCTTTCAATTGTACAATTT+AGG | - | chr5.2:76786780-76786799 | MS.gene48018:intron | 20.0% |
| !! | CATCAAAATACATTATTGAA+GGG | + | chr5.2:76786641-76786660 | None:intergenic | 20.0% |
| !! | GAAAGAAATTAAATAAGTCT+TGG | - | chr5.2:76788398-76788417 | MS.gene48018:intron | 20.0% |
| !! | GATAATGCATAATATATGAA+AGG | - | chr5.2:76787308-76787327 | MS.gene48018:intron | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | - | chr5.2:76788839-76788858 | MS.gene48018:intron | 20.0% |
| !! | TAGAAAATAAAACTTCTATC+TGG | + | chr5.2:76785906-76785925 | None:intergenic | 20.0% |
| !! | TATATGAAACATGTAATGTA+AGG | + | chr5.2:76787201-76787220 | None:intergenic | 20.0% |
| !! | TGAAATTAAATTCCTTTCTT+GGG | - | chr5.2:76788220-76788239 | MS.gene48018:intron | 20.0% |
| !! | TGTGAAGTTATTATAATCAT+TGG | + | chr5.2:76789457-76789476 | None:intergenic | 20.0% |
| !! | TTATCACAATTGTCAAAAAT+TGG | - | chr5.2:76786163-76786182 | MS.gene48018:intron | 20.0% |
| !! | TTCAAAAGTTTAAGAGTTTA+AGG | + | chr5.2:76788579-76788598 | None:intergenic | 20.0% |
| !! | TTGAAATTAAATTCCTTTCT+TGG | - | chr5.2:76788219-76788238 | MS.gene48018:intron | 20.0% |
| !!! | AAAGTTTTTTTAGTTTTTGG+TGG | + | chr5.2:76787356-76787375 | None:intergenic | 20.0% |
| !!! | AACAATTTGGTTAACTTTTT+AGG | + | chr5.2:76789552-76789571 | None:intergenic | 20.0% |
| !!! | AAGGTTGAGATTTAAATTTT+AGG | + | chr5.2:76787182-76787201 | None:intergenic | 20.0% |
| !!! | AATTTTGCAACAATTTTTTG+CGG | - | chr5.2:76788745-76788764 | MS.gene48018:intron | 20.0% |
| !!! | ATAATGTATTGACAAATTCA+TGG | + | chr5.2:76788999-76789018 | None:intergenic | 20.0% |
| !!! | ATAATGTATTTTGATGTTAG+GGG | - | chr5.2:76786645-76786664 | MS.gene48018:CDS | 20.0% |
| !!! | ATTTGATGTTTTAGAATTGT+TGG | - | chr5.2:76786086-76786105 | MS.gene48018:intron | 20.0% |
| !!! | CAATAATGTATTTTGATGTT+AGG | - | chr5.2:76786643-76786662 | MS.gene48018:CDS | 20.0% |
| !!! | CTATTAAGTCCTTTTTTTTT+TGG | - | chr5.2:76786934-76786953 | MS.gene48018:intron | 20.0% |
| !!! | GAAGTTATTTCAATTAAGTT+AGG | - | chr5.2:76786578-76786597 | MS.gene48018:CDS | 20.0% |
| !!! | GTATTTTGGAGTATATTTTT+TGG | - | chr5.2:76786698-76786717 | MS.gene48018:CDS | 20.0% |
| !!! | TATATTTTTTGGATGGATTT+GGG | - | chr5.2:76786709-76786728 | MS.gene48018:CDS | 20.0% |
| !!! | TTGATGATGATATCATAATT+TGG | + | chr5.2:76786885-76786904 | None:intergenic | 20.0% |
| ! | AAATCTTCTTAAATGAATGG+TGG | + | chr5.2:76786378-76786397 | None:intergenic | 25.0% |
| ! | AAATGGAGAAATTTCATGAA+GGG | - | chr5.2:76789303-76789322 | MS.gene48018:intron | 25.0% |
| ! | AACGTAATTAATTGTGACAA+GGG | + | chr5.2:76786131-76786150 | None:intergenic | 25.0% |
| ! | AATCTTCTTAAATGAATGGT+GGG | + | chr5.2:76786377-76786396 | None:intergenic | 25.0% |
| ! | ACAATTAAGTGTGTGAATTT+CGG | + | chr5.2:76787503-76787522 | None:intergenic | 25.0% |
| ! | ACCATTCATTTAAGAAGATT+TGG | - | chr5.2:76786377-76786396 | MS.gene48018:intron | 25.0% |
| ! | AGAAAGAAAGAAAAATACCT+AGG | + | chr5.2:76785163-76785182 | None:intergenic | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | - | chr5.2:76788873-76788892 | MS.gene48018:intron | 25.0% |
| ! | ATAATGCATTAGATAACAGA+GGG | - | chr5.2:76785830-76785849 | MS.gene48018:intron | 25.0% |
| ! | ATCAAATAAAAAGGAATGGA+GGG | - | chr5.2:76786528-76786547 | MS.gene48018:intron | 25.0% |
| ! | ATCAAATAAAAAGGAATGGA+GGG | + | chr5.2:76786547-76786528 | None:intergenic | 25.0% |
| ! | ATGAACCTAATTAAAGTCAT+TGG | + | chr5.2:76789029-76789048 | None:intergenic | 25.0% |
| ! | ATTGGAAATTCTGAATATTG+TGG | + | chr5.2:76785245-76785264 | None:intergenic | 25.0% |
| ! | CTAAAAAAAACAATTGTGTG+TGG | + | chr5.2:76787441-76787460 | None:intergenic | 25.0% |
| ! | CTTAATACCTTCTAACTAAA+GGG | - | chr5.2:76788281-76788300 | MS.gene48018:intron | 25.0% |
| ! | GAAATTAAATTCCTTTCTTG+GGG | - | chr5.2:76788221-76788240 | MS.gene48018:intron | 25.0% |
| ! | GCAGCCAAAAAATAAAATAA+GGG | - | chr5.2:76786434-76786453 | MS.gene48018:intron | 25.0% |
| ! | TAACGTAATTAATTGTGACA+AGG | + | chr5.2:76786132-76786151 | None:intergenic | 25.0% |
| ! | TATAATGCATTAGATAACAG+AGG | - | chr5.2:76785829-76785848 | MS.gene48018:intron | 25.0% |
| ! | TATTGAATTCTGCTTATGAT+CGG | - | chr5.2:76785099-76785118 | MS.gene48018:CDS | 25.0% |
| ! | TCCAAATCTTCTTAAATGAA+TGG | + | chr5.2:76786381-76786400 | None:intergenic | 25.0% |
| ! | TCTTAATACCTTCTAACTAA+AGG | - | chr5.2:76788280-76788299 | MS.gene48018:intron | 25.0% |
| ! | TGAACCTAATTAAAGTCATT+GGG | + | chr5.2:76789028-76789047 | None:intergenic | 25.0% |
| ! | TTCATCCAAAAAATAATGGT+GGG | + | chr5.2:76786282-76786301 | None:intergenic | 25.0% |
| ! | TTTATTGTTACTATGTTGCT+GGG | - | chr5.2:76787806-76787825 | MS.gene48018:intron | 25.0% |
| ! | TTTCATCCAAAAAATAATGG+TGG | + | chr5.2:76786283-76786302 | None:intergenic | 25.0% |
| ! | TTTGCTGGAAAAAAAAAAGT+GGG | - | chr5.2:76786198-76786217 | MS.gene48018:intron | 25.0% |
| !! | ACAATTGAAAAAGTATAAGG+TGG | + | chr5.2:76786254-76786273 | None:intergenic | 25.0% |
| !! | ATTTTTCGTAAGTTTCATTG+GGG | - | chr5.2:76785284-76785303 | MS.gene48018:intron | 25.0% |
| !! | CATTTTTCGTAAGTTTCATT+GGG | - | chr5.2:76785283-76785302 | MS.gene48018:intron | 25.0% |
| !! | TTATTTGAAATAGCCATTCA+AGG | - | chr5.2:76787717-76787736 | MS.gene48018:intron | 25.0% |
| !! | TTGGAAGTGTAAGTAATAAA+TGG | - | chr5.2:76786329-76786348 | MS.gene48018:intron | 25.0% |
| !! | TTTTCCCAATGACTTTAATT+AGG | - | chr5.2:76789021-76789040 | MS.gene48018:intron | 25.0% |
| !! | TTTTGCTGGAAAAAAAAAAG+TGG | - | chr5.2:76786197-76786216 | MS.gene48018:intron | 25.0% |
| !!! | AAGTCCTTTTTTTTTTGGTT+TGG | - | chr5.2:76786939-76786958 | MS.gene48018:intron | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | + | chr5.2:76788550-76788569 | None:intergenic | 25.0% |
| !!! | AGTCTTGGAACATTTTTTTT+TGG | - | chr5.2:76788413-76788432 | MS.gene48018:intron | 25.0% |
| !!! | ATGGAGGAAATTTTAAGTAT+TGG | + | chr5.2:76785942-76785961 | None:intergenic | 25.0% |
| !!! | ATTTTGAGAAGAAAAAAGCA+AGG | - | chr5.2:76786401-76786420 | MS.gene48018:intron | 25.0% |
| !!! | CACACACAATTGTTTTTTTT+AGG | - | chr5.2:76787439-76787458 | MS.gene48018:CDS | 25.0% |
| !!! | GATTTTGAGAAAACAATTGA+AGG | - | chr5.2:76785056-76785075 | MS.gene48018:CDS | 25.0% |
| !!! | GTATATTTTTTGGATGGATT+TGG | - | chr5.2:76786708-76786727 | MS.gene48018:CDS | 25.0% |
| !!! | GTCTTGGAACATTTTTTTTT+GGG | - | chr5.2:76788414-76788433 | MS.gene48018:intron | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | + | chr5.2:76788551-76788570 | None:intergenic | 25.0% |
| !!! | TATTTTGTTGTGTTTAATGG+AGG | + | chr5.2:76785958-76785977 | None:intergenic | 25.0% |
| !!! | TTTGGAGTATATTTTTTGGA+TGG | - | chr5.2:76786702-76786721 | MS.gene48018:CDS | 25.0% |
| AAAAAAGCAAGGAGTAATCA+TGG | - | chr5.2:76786412-76786431 | MS.gene48018:intron | 30.0% | |
| AAGTAAGGACTAAACTTACA+AGG | + | chr5.2:76788473-76788492 | None:intergenic | 30.0% | |
| AATACCTAGGTAAAAAGTCT+TGG | + | chr5.2:76785150-76785169 | None:intergenic | 30.0% | |
| AATGAGTCAATGGAAGTTAA+AGG | - | chr5.2:76785542-76785561 | MS.gene48018:intron | 30.0% | |
| AATTGTGACAAGGGTAAAAT+TGG | + | chr5.2:76786122-76786141 | None:intergenic | 30.0% | |
| ACTGAGACTATGAAAGTTAT+TGG | - | chr5.2:76785516-76785535 | MS.gene48018:intron | 30.0% | |
| AGCTGATTACACACATATTA+AGG | + | chr5.2:76786503-76786522 | None:intergenic | 30.0% | |
| ATTAATTTCACCCACGAAAA+AGG | - | chr5.2:76787409-76787428 | MS.gene48018:CDS | 30.0% | |
| ATTGAAGGGTCTATATCAAT+TGG | + | chr5.2:76786627-76786646 | None:intergenic | 30.0% | |
| CAAATGGAGAAATTTCATGA+AGG | - | chr5.2:76789302-76789321 | MS.gene48018:intron | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | - | chr5.2:76788613-76788632 | MS.gene48018:intron | 30.0% | |
| CAATATCGATAATGTTAGGT+TGG | + | chr5.2:76787558-76787577 | None:intergenic | 30.0% | |
| CAGACAATATCGATAATGTT+AGG | + | chr5.2:76787562-76787581 | None:intergenic | 30.0% | |
| CAGCAACATAGTAACAATAA+AGG | + | chr5.2:76787807-76787826 | None:intergenic | 30.0% | |
| CAGTGCAGAAAAACAAAATT+AGG | - | chr5.2:76788872-76788891 | MS.gene48018:intron | 30.0% | |
| CATAATATATGAAAGGTCTG+AGG | - | chr5.2:76787315-76787334 | MS.gene48018:intron | 30.0% | |
| CATCAAATAAAAAGGAATGG+AGG | - | chr5.2:76786527-76786546 | MS.gene48018:intron | 30.0% | |
| CATCAAATAAAAAGGAATGG+AGG | + | chr5.2:76786546-76786527 | None:intergenic | 30.0% | |
| CATGAAGGGACAAATAAAAA+GGG | - | chr5.2:76789317-76789336 | MS.gene48018:intron | 30.0% | |
| CCAATGAAACTTACGAAAAA+TGG | + | chr5.2:76785285-76785304 | None:intergenic | 30.0% | |
| CTGAGACTATGAAAGTTATT+GGG | - | chr5.2:76785517-76785536 | MS.gene48018:intron | 30.0% | |
| CTTTATTGTTACTATGTTGC+TGG | - | chr5.2:76787805-76787824 | MS.gene48018:intron | 30.0% | |
| GGCAGCCAAAAAATAAAATA+AGG | - | chr5.2:76786433-76786452 | MS.gene48018:intron | 30.0% | |
| GTTAGGAAAGCAATTAAGTT+AGG | - | chr5.2:76786595-76786614 | MS.gene48018:CDS | 30.0% | |
| TAAGAAACCAACATGATGTT+CGG | + | chr5.2:76788265-76788284 | None:intergenic | 30.0% | |
| TATGAGACTAATCTTTGAGT+CGG | - | chr5.2:76788128-76788147 | MS.gene48018:intron | 30.0% | |
| TCATGAAGGGACAAATAAAA+AGG | - | chr5.2:76789316-76789335 | MS.gene48018:intron | 30.0% | |
| TCTTCATTCTTGAATATGTG+TGG | + | chr5.2:76785322-76785341 | None:intergenic | 30.0% | |
| TTCTTTGATGAAGCAGAAAA+GGG | - | chr5.2:76789348-76789367 | MS.gene48018:CDS | 30.0% | |
| TTTCATGAAGTGATTATGAG+AGG | - | chr5.2:76785799-76785818 | MS.gene48018:intron | 30.0% | |
| ! | TGGTTAGATCGTTAGTATTT+TGG | - | chr5.2:76786684-76786703 | MS.gene48018:CDS | 30.0% |
| ! | TTTGTTATATGTAGACGAAG+TGG | - | chr5.2:76787468-76787487 | MS.gene48018:CDS | 30.0% |
| ! | TTTTTCGTAAGTTTCATTGG+GGG | - | chr5.2:76785285-76785304 | MS.gene48018:intron | 30.0% |
| !! | AACGTCAAAGTTGATTTTAG+AGG | - | chr5.2:76787380-76787399 | MS.gene48018:CDS | 30.0% |
| !! | ATTGAAGGTGATTTTAGCAA+TGG | - | chr5.2:76785071-76785090 | MS.gene48018:CDS | 30.0% |
| !! | CCATTTTTCGTAAGTTTCAT+TGG | - | chr5.2:76785282-76785301 | MS.gene48018:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr5.2:76788933-76788952 | MS.gene48018:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr5.2:76788952-76788933 | None:intergenic | 30.0% |
| !! | TCAAAGATTAGTCTCATAGT+GGG | + | chr5.2:76788126-76788145 | None:intergenic | 30.0% |
| !! | TGGCACTTTTAAAAAGTGAA+CGG | + | chr5.2:76786234-76786253 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr5.2:76788932-76788951 | MS.gene48018:intron | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr5.2:76788951-76788932 | None:intergenic | 30.0% |
| !!! | ATACTCCCACCATTATTTTT+TGG | - | chr5.2:76786274-76786293 | MS.gene48018:intron | 30.0% |
| !!! | GTTTTTTTAGTTTTTGGTGG+TGG | + | chr5.2:76787353-76787372 | None:intergenic | 30.0% |
| AAAGCTATATGGGCAATCTA+TGG | - | chr5.2:76786831-76786850 | MS.gene48018:intron | 35.0% | |
| AAGAAACCAACATGATGTTC+GGG | + | chr5.2:76788264-76788283 | None:intergenic | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | - | chr5.2:76788917-76788936 | MS.gene48018:intron | 35.0% | |
| ACACTTCCAAAAAATGAACG+TGG | + | chr5.2:76786319-76786338 | None:intergenic | 35.0% | |
| ACCAATATACTCAGAGATGT+TGG | - | chr5.2:76787937-76787956 | MS.gene48018:intron | 35.0% | |
| ACTAAGCATACACTTAGTTG+TGG | + | chr5.2:76787252-76787271 | None:intergenic | 35.0% | |
| AGAACTGATGAACTAGTAGA+TGG | - | chr5.2:76787000-76787019 | MS.gene48018:intron | 35.0% | |
| ATTAAGTGTGTGAATTTCGG+CGG | + | chr5.2:76787500-76787519 | None:intergenic | 35.0% | |
| CACACTTAATTGTGAGATTC+CGG | - | chr5.2:76787510-76787529 | MS.gene48018:intron | 35.0% | |
| CACTTCCAAAAAATGAACGT+GGG | + | chr5.2:76786318-76786337 | None:intergenic | 35.0% | |
| CATTCAAGGACATGATAGAA+GGG | - | chr5.2:76787731-76787750 | MS.gene48018:intron | 35.0% | |
| CTTATGAGTGTTCCTGTAAT+GGG | - | chr5.2:76787838-76787857 | MS.gene48018:intron | 35.0% | |
| GAGCATTTATAATGCTGCAT+TGG | - | chr5.2:76787891-76787910 | MS.gene48018:intron | 35.0% | |
| GCAGCATCAAACATATCATA+TGG | + | chr5.2:76787102-76787121 | None:intergenic | 35.0% | |
| GCATAATGTCTTCATCTGAT+AGG | + | chr5.2:76789266-76789285 | None:intergenic | 35.0% | |
| GTGGAAAAGTAACAGACAAA+TGG | - | chr5.2:76789286-76789305 | MS.gene48018:intron | 35.0% | |
| GTTCTTTGATGAAGCAGAAA+AGG | - | chr5.2:76789347-76789366 | MS.gene48018:CDS | 35.0% | |
| TAAGTACCCTGTTGATATTC+AGG | - | chr5.2:76787140-76787159 | MS.gene48018:intron | 35.0% | |
| TCCAACATCTCTGAGTATAT+TGG | + | chr5.2:76787941-76787960 | None:intergenic | 35.0% | |
| TCGATATTGTCTGTTGAGTT+AGG | - | chr5.2:76787569-76787588 | MS.gene48018:intron | 35.0% | |
| TCTTATGAGTGTTCCTGTAA+TGG | - | chr5.2:76787837-76787856 | MS.gene48018:intron | 35.0% | |
| TTATTGGGAGAATGAGTCAA+TGG | - | chr5.2:76785532-76785551 | MS.gene48018:intron | 35.0% | |
| TTCACAAAAAGGGCTTATGT+TGG | - | chr5.2:76789471-76789490 | MS.gene48018:CDS | 35.0% | |
| TTTCATTGTGCATTGCAGTA+TGG | - | chr5.2:76786971-76786990 | MS.gene48018:intron | 35.0% | |
| ! | AGATTGCCCATATAGCTTTT+CGG | + | chr5.2:76786830-76786849 | None:intergenic | 35.0% |
| ! | GAAGTACCTGAATATCAACA+GGG | + | chr5.2:76787149-76787168 | None:intergenic | 35.0% |
| ! | GATTATGATAGTGCTAGAAG+AGG | - | chr5.2:76789201-76789220 | MS.gene48018:intron | 35.0% |
| ! | TATGCCAAGACTTTTTACCT+AGG | - | chr5.2:76785143-76785162 | MS.gene48018:CDS | 35.0% |
| ! | TGAAGTACCTGAATATCAAC+AGG | + | chr5.2:76787150-76787169 | None:intergenic | 35.0% |
| !! | CTCAAAGATTAGTCTCATAG+TGG | + | chr5.2:76788127-76788146 | None:intergenic | 35.0% |
| !! | GAGTTGATAGAAAACGATGA+TGG | + | chr5.2:76785878-76785897 | None:intergenic | 35.0% |
| !! | TGGAGTACTAAATGTTTTGC+TGG | - | chr5.2:76786183-76786202 | MS.gene48018:intron | 35.0% |
| !!! | ATACTCCCACGTTCATTTTT+TGG | - | chr5.2:76786310-76786329 | MS.gene48018:intron | 35.0% |
| AAGAACGCCGAAAAGCTATA+TGG | - | chr5.2:76786820-76786839 | MS.gene48018:intron | 40.0% | |
| AATTCTGCTTATGATCGGTG+TGG | - | chr5.2:76785104-76785123 | MS.gene48018:CDS | 40.0% | |
| AGAAACCAACATGATGTTCG+GGG | + | chr5.2:76788263-76788282 | None:intergenic | 40.0% | |
| AGAACCTTCAAGAAGTTCAG+AGG | - | chr5.2:76784959-76784978 | MS.gene48018:CDS | 40.0% | |
| AGAACGCCGAAAAGCTATAT+GGG | - | chr5.2:76786821-76786840 | MS.gene48018:intron | 40.0% | |
| ATTCCTGAAGTTCATCAGAG+AGG | + | chr5.2:76788200-76788219 | None:intergenic | 40.0% | |
| CCATTCAAGGACATGATAGA+AGG | - | chr5.2:76787730-76787749 | MS.gene48018:intron | 40.0% | |
| CCTTCTATCATGTCCTTGAA+TGG | + | chr5.2:76787733-76787752 | None:intergenic | 40.0% | |
| CTAGGATAAGGTTTGGAAGT+GGG | - | chr5.2:76784922-76784941 | MS.gene48018:CDS | 40.0% | |
| TAGGATAAGGTTTGGAAGTG+GGG | - | chr5.2:76784923-76784942 | MS.gene48018:CDS | 40.0% | |
| TATAAGACCCTAGTTTCGGT+GGG | + | chr5.2:76788057-76788076 | None:intergenic | 40.0% | |
| TCAGATGAAGACATTATGCG+TGG | - | chr5.2:76789267-76789286 | MS.gene48018:intron | 40.0% | |
| TGAGTTGTCCGCATAGATTA+AGG | + | chr5.2:76788092-76788111 | None:intergenic | 40.0% | |
| TTATCACTACCAGCTGCTTA+TGG | - | chr5.2:76789510-76789529 | MS.gene48018:CDS | 40.0% | |
| TTCAAGAAGTTCAGAGGAGA+GGG | - | chr5.2:76784965-76784984 | MS.gene48018:CDS | 40.0% | |
| TTTCTAACCCACCGAAACTA+GGG | - | chr5.2:76788047-76788066 | MS.gene48018:intron | 40.0% | |
| TTTGGTGAGAGAAGATAGGA+GGG | - | chr5.2:76785016-76785035 | MS.gene48018:CDS | 40.0% | |
| ! | AAGGTTTTCATTCTCGCGAT+CGG | - | chr5.2:76788361-76788380 | MS.gene48018:intron | 40.0% |
| ! | GCTTATGGAACTGCACTTTT+AGG | - | chr5.2:76789525-76789544 | MS.gene48018:CDS | 40.0% |
| ! | GGGCAGCATTGTTGTTATAT+AGG | - | chr5.2:76789409-76789428 | MS.gene48018:CDS | 40.0% |
| ! | GTGTGATGTGTGAAGCATTT+GGG | + | chr5.2:76787026-76787045 | None:intergenic | 40.0% |
| ! | TATAATGCTGCATTGGCACT+AGG | - | chr5.2:76787898-76787917 | MS.gene48018:intron | 40.0% |
| ! | TCTAGGATAAGGTTTGGAAG+TGG | - | chr5.2:76784921-76784940 | MS.gene48018:CDS | 40.0% |
| ! | TGAGATTCCGGATTTGAGTT+CGG | - | chr5.2:76787522-76787541 | MS.gene48018:intron | 40.0% |
| !! | ATGGGTTCTAGGATAAGGTT+TGG | - | chr5.2:76784915-76784934 | MS.gene48018:CDS | 40.0% |
| !!! | AGTTTTGAAGCAAGCAGGTT+TGG | - | chr5.2:76784998-76785017 | MS.gene48018:CDS | 40.0% |
| !!! | GAAGTAGTTTTGAAGCAAGC+AGG | - | chr5.2:76784993-76785012 | MS.gene48018:CDS | 40.0% |
| !!! | TTTTAGTTTTTGGTGGTGGC+CGG | + | chr5.2:76787349-76787368 | None:intergenic | 40.0% |
| AATGCTCTCTGTAGAAGCCT+TGG | + | chr5.2:76787878-76787897 | None:intergenic | 45.0% | |
| ACACTAAGACCTCACCATTG+GGG | + | chr5.2:76785758-76785777 | None:intergenic | 45.0% | |
| AGACAATCGTGTAGTCCGTA+AGG | + | chr5.2:76787595-76787614 | None:intergenic | 45.0% | |
| AGACACTAAGACCTCACCAT+TGG | + | chr5.2:76785760-76785779 | None:intergenic | 45.0% | |
| AGCTCAGTTCTGCTAGTAGA+TGG | - | chr5.2:76789379-76789398 | MS.gene48018:CDS | 45.0% | |
| AGGACATGATAGAAGGGATG+AGG | - | chr5.2:76787737-76787756 | MS.gene48018:intron | 45.0% | |
| AGGATAAGGTTTGGAAGTGG+GGG | - | chr5.2:76784924-76784943 | MS.gene48018:CDS | 45.0% | |
| ATCACTTAGACCATCCCCAA+TGG | - | chr5.2:76785741-76785760 | MS.gene48018:intron | 45.0% | |
| CATAGGCGCCTTAATCTATG+CGG | - | chr5.2:76788081-76788100 | MS.gene48018:intron | 45.0% | |
| CATGATAGAAGGGATGAGGA+TGG | - | chr5.2:76787741-76787760 | MS.gene48018:intron | 45.0% | |
| CGAGAAGCCCTTTAGTTAGA+AGG | + | chr5.2:76788291-76788310 | None:intergenic | 45.0% | |
| CTACCTCTCTGATGAACTTC+AGG | - | chr5.2:76788194-76788213 | MS.gene48018:intron | 45.0% | |
| CTCTCCTCTGAACTTCTTGA+AGG | + | chr5.2:76784966-76784985 | None:intergenic | 45.0% | |
| CTTCAAGAAGTTCAGAGGAG+AGG | - | chr5.2:76784964-76784983 | MS.gene48018:CDS | 45.0% | |
| CTTGTGCTAGCTCATCTTGA+GGG | + | chr5.2:76789239-76789258 | None:intergenic | 45.0% | |
| CTTTCGTCCGAACTCAAATC+CGG | + | chr5.2:76787532-76787551 | None:intergenic | 45.0% | |
| CTTTCTAACCCACCGAAACT+AGG | - | chr5.2:76788046-76788065 | MS.gene48018:intron | 45.0% | |
| GACACTAAGACCTCACCATT+GGG | + | chr5.2:76785759-76785778 | None:intergenic | 45.0% | |
| GCGGTATAAGACCCTAGTTT+CGG | + | chr5.2:76788061-76788080 | None:intergenic | 45.0% | |
| GTAACACTCTTCCCCAAGAA+AGG | + | chr5.2:76788235-76788254 | None:intergenic | 45.0% | |
| GTATAAGACCCTAGTTTCGG+TGG | + | chr5.2:76788058-76788077 | None:intergenic | 45.0% | |
| GTCTGTTGAGTTAGGCCTTA+CGG | - | chr5.2:76787577-76787596 | MS.gene48018:intron | 45.0% | |
| GTTAGGGGCAAGCAATTAAG+TGG | - | chr5.2:76786660-76786679 | MS.gene48018:CDS | 45.0% | |
| TACTATGTTGCTGGGACAGT+AGG | - | chr5.2:76787814-76787833 | MS.gene48018:intron | 45.0% | |
| TCTGTAGAAGCCTTGGATTC+AGG | + | chr5.2:76787871-76787890 | None:intergenic | 45.0% | |
| TTGGTGAGAGAAGATAGGAG+GGG | - | chr5.2:76785017-76785036 | MS.gene48018:CDS | 45.0% | |
| ! | ATAGATTAAGGCGCCTATGG+CGG | + | chr5.2:76788080-76788099 | None:intergenic | 45.0% |
| ! | GGTGTGATGTGTGAAGCATT+TGG | + | chr5.2:76787027-76787046 | None:intergenic | 45.0% |
| ! | GTTTGGTGAGAGAAGATAGG+AGG | - | chr5.2:76785015-76785034 | MS.gene48018:CDS | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+AGG | - | chr5.2:76787286-76787305 | MS.gene48018:intron | 45.0% |
| !! | CAGGTTTGGTGAGAGAAGAT+AGG | - | chr5.2:76785012-76785031 | MS.gene48018:CDS | 45.0% |
| !! | GTGGTCTTCTCCTTTTTCGT+GGG | + | chr5.2:76787422-76787441 | None:intergenic | 45.0% |
| !! | TCAGGTGCTATTCCCATTAC+AGG | + | chr5.2:76787853-76787872 | None:intergenic | 45.0% |
| !! | TGTGGTCTTCTCCTTTTTCG+TGG | + | chr5.2:76787423-76787442 | None:intergenic | 45.0% |
| !!! | TTTAGTTTTTGGTGGTGGCC+GGG | + | chr5.2:76787348-76787367 | None:intergenic | 45.0% |
| !! | ATTAAATATATATTAGTAAT+TGG | + | chr5.2:76785995-76786014 | None:intergenic | 5.0% |
| !! | GATTTAATTATAAAAAAAAA+AGG | + | chr5.2:76788977-76788996 | None:intergenic | 5.0% |
| !!! | AAATTTTACTTATTATTTAT+TGG | - | chr5.2:76785646-76785665 | MS.gene48018:intron | 5.0% |
| !!! | ATAAGTAAATTTTTTTTTAT+AGG | + | chr5.2:76788518-76788537 | None:intergenic | 5.0% |
| !!! | TAAGTAAATTTTTTTTTATA+GGG | + | chr5.2:76788517-76788536 | None:intergenic | 5.0% |
| AACAACAATGCTGCCCACAC+AGG | + | chr5.2:76789405-76789424 | None:intergenic | 50.0% | |
| AGTGCAGTTCCATAAGCAGC+TGG | + | chr5.2:76789522-76789541 | None:intergenic | 50.0% | |
| CAACATGATGTTCGGGGAGT+TGG | + | chr5.2:76788257-76788276 | None:intergenic | 50.0% | |
| CAACTCCCCGAACATCATGT+TGG | - | chr5.2:76788255-76788274 | MS.gene48018:intron | 50.0% | |
| CAAGATGAGCTAGCACAAGC+TGG | - | chr5.2:76789240-76789259 | MS.gene48018:intron | 50.0% | |
| GCTTGTGCTAGCTCATCTTG+AGG | + | chr5.2:76789240-76789259 | None:intergenic | 50.0% | |
| GGGAATAGCACCTGAATCCA+AGG | - | chr5.2:76787858-76787877 | MS.gene48018:intron | 50.0% | |
| GGGGCAAGCAATTAAGTGGT+TGG | - | chr5.2:76786664-76786683 | MS.gene48018:CDS | 50.0% | |
| TAAGACCTCACCATTGGGGA+TGG | + | chr5.2:76785754-76785773 | None:intergenic | 50.0% | |
| TCTCGTGAGCTTAGCTCAGT+TGG | - | chr5.2:76787281-76787300 | MS.gene48018:intron | 50.0% | |
| TGCTAGTAGATGGCCTGTGT+GGG | - | chr5.2:76789389-76789408 | MS.gene48018:CDS | 50.0% | |
| TTAGACCATCCCCAATGGTG+AGG | - | chr5.2:76785746-76785765 | MS.gene48018:intron | 50.0% | |
| ! | AAGGTCTGAGGTTCAAACCC+CGG | - | chr5.2:76787327-76787346 | MS.gene48018:intron | 50.0% |
| ! | CGCATAGATTAAGGCGCCTA+TGG | + | chr5.2:76788083-76788102 | None:intergenic | 50.0% |
| ! | CTAGGGTCTTATACCGCCAT+AGG | - | chr5.2:76788064-76788083 | MS.gene48018:intron | 50.0% |
| !!! | TTAGTTTTTGGTGGTGGCCG+GGG | + | chr5.2:76787347-76787366 | None:intergenic | 50.0% |
| ACACATCACACCAGCAGCCT+TGG | - | chr5.2:76787035-76787054 | MS.gene48018:intron | 55.0% | |
| ACCAGCAGCCTTGGACAGAT+GGG | - | chr5.2:76787044-76787063 | MS.gene48018:intron | 55.0% | |
| CCTTGGACAGATGGGAGCAA+CGG | - | chr5.2:76787052-76787071 | MS.gene48018:intron | 55.0% | |
| CTGCTAGTAGATGGCCTGTG+TGG | - | chr5.2:76789388-76789407 | MS.gene48018:CDS | 55.0% | |
| CACCAGCAGCCTTGGACAGA+TGG | - | chr5.2:76787043-76787062 | MS.gene48018:intron | 60.0% | |
| CCGTTGCTCCCATCTGTCCA+AGG | + | chr5.2:76787055-76787074 | None:intergenic | 60.0% | |
| TCCCATCTGTCCAAGGCTGC+TGG | + | chr5.2:76787048-76787067 | None:intergenic | 60.0% | |
| ! | GTTTGGAAGTGGGGGTGCAG+TGG | - | chr5.2:76784932-76784951 | MS.gene48018:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 76784915 | 76789581 | 76784915 | ID=MS.gene48018 |
| chr5.2 | mRNA | 76784915 | 76789581 | 76784915 | ID=MS.gene48018.t1;Parent=MS.gene48018 |
| chr5.2 | exon | 76789332 | 76789581 | 76789332 | ID=MS.gene48018.t1.exon1;Parent=MS.gene48018.t1 |
| chr5.2 | CDS | 76789332 | 76789581 | 76789332 | ID=cds.MS.gene48018.t1;Parent=MS.gene48018.t1 |
| chr5.2 | exon | 76787644 | 76787694 | 76787644 | ID=MS.gene48018.t1.exon2;Parent=MS.gene48018.t1 |
| chr5.2 | CDS | 76787644 | 76787694 | 76787644 | ID=cds.MS.gene48018.t1;Parent=MS.gene48018.t1 |
| chr5.2 | exon | 76787335 | 76787507 | 76787335 | ID=MS.gene48018.t1.exon3;Parent=MS.gene48018.t1 |
| chr5.2 | CDS | 76787335 | 76787507 | 76787335 | ID=cds.MS.gene48018.t1;Parent=MS.gene48018.t1 |
| chr5.2 | exon | 76786531 | 76786766 | 76786531 | ID=MS.gene48018.t1.exon4;Parent=MS.gene48018.t1 |
| chr5.2 | CDS | 76786531 | 76786766 | 76786531 | ID=cds.MS.gene48018.t1;Parent=MS.gene48018.t1 |
| chr5.2 | exon | 76784915 | 76785284 | 76784915 | ID=MS.gene48018.t1.exon5;Parent=MS.gene48018.t1 |
| chr5.2 | CDS | 76784915 | 76785284 | 76784915 | ID=cds.MS.gene48018.t1;Parent=MS.gene48018.t1 |
| Gene Sequence |
| Protein sequence |
