Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056399.t1 | KAE8651744.1 | 88.6 | 70 | 8 | 0 | 30 | 99 | 5 | 74 | 1.30E-25 | 125.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056399.t1 | O22860 | 93.5 | 62 | 4 | 0 | 38 | 99 | 2 | 63 | 2.3e-26 | 119.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056399.t1 | G7JEV4 | 100.0 | 62 | 0 | 0 | 38 | 99 | 2 | 63 | 1.2e-25 | 125.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050252 | MS.gene056399 | 0.804637 | 1.96E-49 | -1.69E-46 |
| MS.gene056399 | MS.gene21636 | 0.811147 | 8.10E-51 | -1.69E-46 |
| MS.gene056399 | MS.gene34283 | 0.803784 | 2.96E-49 | -1.69E-46 |
| MS.gene056399 | MS.gene94182 | 0.822656 | 2.11E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056399.t1 | MTR_4g068040 | 100.000 | 62 | 0 | 0 | 38 | 99 | 2 | 63 | 6.90e-40 | 127 |
| MS.gene056399.t1 | MTR_4g068040 | 100.000 | 62 | 0 | 0 | 38 | 99 | 2 | 63 | 9.19e-40 | 126 |
| MS.gene056399.t1 | MTR_8g079485 | 96.721 | 61 | 2 | 0 | 39 | 99 | 3 | 63 | 9.51e-38 | 121 |
| MS.gene056399.t1 | MTR_2g018680 | 95.161 | 62 | 3 | 0 | 38 | 99 | 2 | 63 | 1.68e-37 | 120 |
| MS.gene056399.t1 | MTR_2g018680 | 95.161 | 62 | 3 | 0 | 38 | 99 | 2 | 63 | 2.18e-37 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056399.t1 | AT3G59540 | 93.548 | 62 | 4 | 0 | 38 | 99 | 2 | 63 | 6.35e-38 | 122 |
| MS.gene056399.t1 | AT2G43460 | 93.548 | 62 | 4 | 0 | 38 | 99 | 2 | 63 | 6.35e-38 | 122 |
Find 18 sgRNAs with CRISPR-Local
Find 133 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGCAAATCAATGAGATTA+AGG | 0.290766 | 4.1:+33877389 | MS.gene056399:CDS |
| TACAATTTCAAATAACGGTT+TGG | 0.311618 | 4.1:-33875253 | None:intergenic |
| ACAATTTCAAATAACGGTTT+GGG | 0.350894 | 4.1:-33875252 | None:intergenic |
| TTTGCTTCTCTTGATCTTCA+CGG | 0.377542 | 4.1:-33877448 | None:intergenic |
| CAAAGATGTTGTCAAGTTCA+AGG | 0.412153 | 4.1:+33877467 | MS.gene056399:CDS |
| TTTGTTACAATTTCAAATAA+CGG | 0.425065 | 4.1:-33875258 | None:intergenic |
| TTCAAATAACGGTTTGGGAG+TGG | 0.459079 | 4.1:-33875247 | None:intergenic |
| ACAAAGTGTGTACAAGTACT+TGG | 0.506752 | 4.1:-33877499 | None:intergenic |
| TTAATCTCATTGATTTGCTT+AGG | 0.531275 | 4.1:-33877387 | None:intergenic |
| GTTATTTGAAATTGTAACAA+AGG | 0.546608 | 4.1:+33875260 | MS.gene056399:CDS |
| TTAGAGTTTGACGTCGCAGT+CGG | 0.548392 | 4.1:-33875183 | None:intergenic |
| AGGACTTCCTCCTCACTGCT+AGG | 0.557805 | 4.1:+33877409 | MS.gene056399:CDS |
| CCTCCTCACTGCTAGGAGGA+AGG | 0.566472 | 4.1:+33877416 | MS.gene056399:CDS |
| TCGAAATTAACAGCGATGGA+AGG | 0.612492 | 4.1:+33875156 | None:intergenic |
| CCTTCCTCCTAGCAGTGAGG+AGG | 0.657731 | 4.1:-33877416 | None:intergenic |
| ACTTCCTCCTCACTGCTAGG+AGG | 0.666318 | 4.1:+33877412 | MS.gene056399:CDS |
| TACAACGTAAACAAGCTCAC+CGG | 0.667353 | 4.1:-33875211 | None:intergenic |
| CATCCTTCCTCCTAGCAGTG+AGG | 0.669946 | 4.1:-33877419 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAAAAAAATATATA+AGG | - | chr4.1:33875479-33875498 | None:intergenic | 0.0% |
| !!! | TTATTATATATTTTTTTATT+TGG | + | chr4.1:33877288-33877307 | MS.gene056399:intron | 0.0% |
| !!! | AATTTTTTTTACTCAATTTT+AGG | + | chr4.1:33877147-33877166 | MS.gene056399:intron | 10.0% |
| !!! | ATTTTTTTTACTCAATTTTA+GGG | + | chr4.1:33877148-33877167 | MS.gene056399:intron | 10.0% |
| !!! | TATATTTTTTTATTTGGATT+TGG | + | chr4.1:33877294-33877313 | MS.gene056399:intron | 10.0% |
| !! | AAATTGCTTAAAATACAAAA+TGG | + | chr4.1:33875417-33875436 | MS.gene056399:intron | 15.0% |
| !! | ATTGAGTAAAAAAAATTCAT+AGG | - | chr4.1:33877144-33877163 | None:intergenic | 15.0% |
| !! | TTTGTTACAATTTCAAATAA+CGG | - | chr4.1:33875261-33875280 | None:intergenic | 15.0% |
| !! | TTTGTTACTCATTTATATTT+GGG | - | chr4.1:33876076-33876095 | None:intergenic | 15.0% |
| !!! | TTTTGTTACTCATTTATATT+TGG | - | chr4.1:33876077-33876096 | None:intergenic | 15.0% |
| !! | AAAACATTGAAAATCAAGAT+AGG | - | chr4.1:33877084-33877103 | None:intergenic | 20.0% |
| !! | AACAACTCTATAAAAATACA+TGG | + | chr4.1:33875694-33875713 | MS.gene056399:intron | 20.0% |
| !! | AATTACATAGATCAAATTGA+TGG | + | chr4.1:33876561-33876580 | MS.gene056399:intron | 20.0% |
| !! | ACATTTCAATAAACACAAAA+AGG | - | chr4.1:33877365-33877384 | None:intergenic | 20.0% |
| !! | ATGTTTATGACGTTAAAATA+TGG | + | chr4.1:33875534-33875553 | MS.gene056399:intron | 20.0% |
| !! | ATTATACATTGATCTGAATT+AGG | + | chr4.1:33877209-33877228 | MS.gene056399:intron | 20.0% |
| !! | TACTTATGCTAAAATTACAA+AGG | + | chr4.1:33876151-33876170 | MS.gene056399:intron | 20.0% |
| !! | TTATACATTGATCTGAATTA+GGG | + | chr4.1:33877210-33877229 | MS.gene056399:intron | 20.0% |
| !!! | AAAATTCATGATTCAAGTTT+TGG | - | chr4.1:33875351-33875370 | None:intergenic | 20.0% |
| !!! | GTTATTTGAAATTGTAACAA+AGG | + | chr4.1:33875260-33875279 | MS.gene056399:CDS | 20.0% |
| !!! | TCAAATTTGTCTATCTTTTA+AGG | - | chr4.1:33876741-33876760 | None:intergenic | 20.0% |
| !!! | TGTATTTTAAGCAATTTCAA+AGG | - | chr4.1:33875414-33875433 | None:intergenic | 20.0% |
| !!! | TGTATTTTTATAGAGTTGTT+TGG | - | chr4.1:33875694-33875713 | None:intergenic | 20.0% |
| !!! | TTTTCATACATTTTTCCTTT+TGG | - | chr4.1:33876714-33876733 | None:intergenic | 20.0% |
| !!! | TTTTTATTTGGATTTGGATT+TGG | + | chr4.1:33877300-33877319 | MS.gene056399:intron | 20.0% |
| ! | AAACTACACATTGTAAAGAT+GGG | + | chr4.1:33876674-33876693 | MS.gene056399:intron | 25.0% |
| ! | AACAAGTGAAATTGAATCAA+TGG | + | chr4.1:33877178-33877197 | MS.gene056399:intron | 25.0% |
| ! | AACCATAATCAACCTTATAA+AGG | - | chr4.1:33875886-33875905 | None:intergenic | 25.0% |
| ! | AACCCTATATTATGAAAAGA+CGG | - | chr4.1:33876866-33876885 | None:intergenic | 25.0% |
| ! | ACAATTTCAAATAACGGTTT+GGG | - | chr4.1:33875255-33875274 | None:intergenic | 25.0% |
| ! | ACCTTATAAAGGTTTCAAAA+TGG | - | chr4.1:33875875-33875894 | None:intergenic | 25.0% |
| ! | TAAGCAAATCAATGAGATTA+AGG | + | chr4.1:33877389-33877408 | MS.gene056399:CDS | 25.0% |
| ! | TACAATTTCAAATAACGGTT+TGG | - | chr4.1:33875256-33875275 | None:intergenic | 25.0% |
| ! | TTGCTTAAAATACAAAATGG+AGG | + | chr4.1:33875420-33875439 | MS.gene056399:intron | 25.0% |
| !! | AAAATTAGAATTTTCCGACA+AGG | + | chr4.1:33875567-33875586 | MS.gene056399:intron | 25.0% |
| !! | AAAATTCGATTTCTAGATCA+AGG | - | chr4.1:33875652-33875671 | None:intergenic | 25.0% |
| !! | AACCTTTATAAGGTTGATTA+TGG | + | chr4.1:33875881-33875900 | MS.gene056399:intron | 25.0% |
| !! | ATTTGAAATTGTAACAAAGG+TGG | + | chr4.1:33875263-33875282 | MS.gene056399:intron | 25.0% |
| !! | CGGAAAATTCTAATTTTACA+TGG | - | chr4.1:33875564-33875583 | None:intergenic | 25.0% |
| !! | CTCTAGTTCAATTCAAATAT+TGG | + | chr4.1:33876466-33876485 | MS.gene056399:intron | 25.0% |
| !! | TACCGTCTTTTCATAATATA+GGG | + | chr4.1:33876861-33876880 | MS.gene056399:intron | 25.0% |
| !!! | AAAAGCTTTAAAACATGCTA+CGG | + | chr4.1:33876418-33876437 | MS.gene056399:intron | 25.0% |
| !!! | ACAGTTTTTTTGTAGGAAAT+TGG | + | chr4.1:33877041-33877060 | MS.gene056399:intron | 25.0% |
| !!! | ACCATTTTGAAACCTTTATA+AGG | + | chr4.1:33875871-33875890 | MS.gene056399:intron | 25.0% |
| !!! | TCAATTCACAGTTTTTTTGT+AGG | + | chr4.1:33877034-33877053 | MS.gene056399:intron | 25.0% |
| !!! | TGGTTTTTGATTTTCAAACT+TGG | + | chr4.1:33877239-33877258 | MS.gene056399:intron | 25.0% |
| !!! | TTAATCTCATTGATTTGCTT+AGG | - | chr4.1:33877390-33877409 | None:intergenic | 25.0% |
| !!! | TTTGATTTTCAAACTTGGTA+GGG | + | chr4.1:33877244-33877263 | MS.gene056399:intron | 25.0% |
| !!! | TTTTGATTTTCAAACTTGGT+AGG | + | chr4.1:33877243-33877262 | MS.gene056399:intron | 25.0% |
| AAAACACTGCAAAGAATCAA+TGG | - | chr4.1:33877001-33877020 | None:intergenic | 30.0% | |
| AAACTAAACTCTTGGTAAAC+CGG | + | chr4.1:33876797-33876816 | MS.gene056399:intron | 30.0% | |
| AGTTACACAAACTAAACTCT+TGG | + | chr4.1:33876789-33876808 | MS.gene056399:intron | 30.0% | |
| ATTTACGACATTTAGCCAAT+TGG | + | chr4.1:33876317-33876336 | MS.gene056399:intron | 30.0% | |
| CAAACTACACATTGTAAAGA+TGG | + | chr4.1:33876673-33876692 | MS.gene056399:intron | 30.0% | |
| GATCTGAATTAGGGAATTTA+TGG | + | chr4.1:33877219-33877238 | MS.gene056399:intron | 30.0% | |
| TAATTAATCTCGTTCCTTGT+CGG | - | chr4.1:33875584-33875603 | None:intergenic | 30.0% | |
| TTAAGCAATTTCAAAGGAGT+TGG | - | chr4.1:33875408-33875427 | None:intergenic | 30.0% | |
| TTGATGCATTAGCAAACAAT+GGG | + | chr4.1:33876757-33876776 | MS.gene056399:intron | 30.0% | |
| TTTGATGCATTAGCAAACAA+TGG | + | chr4.1:33876756-33876775 | MS.gene056399:intron | 30.0% | |
| ! | ACGTCAAACTCTAAAAATTC+CGG | + | chr4.1:33875192-33875211 | MS.gene056399:CDS | 30.0% |
| ! | GTACCGTCTTTTCATAATAT+AGG | + | chr4.1:33876860-33876879 | MS.gene056399:intron | 30.0% |
| ! | TCGAAGGTTTGAGAATTTTA+GGG | - | chr4.1:33876905-33876924 | None:intergenic | 30.0% |
| !! | AAAGCTTTAAAACATGCTAC+GGG | + | chr4.1:33876419-33876438 | MS.gene056399:intron | 30.0% |
| !! | GAGTCAAAGTTTTAATGCTA+CGG | - | chr4.1:33875737-33875756 | None:intergenic | 30.0% |
| AAATATCCAAACGTATCCGA+TGG | - | chr4.1:33875944-33875963 | None:intergenic | 35.0% | |
| AAGGAGTTGGATGACTTTAT+TGG | - | chr4.1:33875395-33875414 | None:intergenic | 35.0% | |
| ACAAAGTGTGTACAAGTACT+TGG | - | chr4.1:33877502-33877521 | None:intergenic | 35.0% | |
| ACCTAAAAGGTTCATGAGAA+GGG | + | chr4.1:33875758-33875777 | MS.gene056399:intron | 35.0% | |
| CAAAGATGTTGTCAAGTTCA+AGG | + | chr4.1:33877467-33877486 | MS.gene056399:CDS | 35.0% | |
| CCATTGGATCTTGTAAAATG+TGG | + | chr4.1:33876007-33876026 | MS.gene056399:intron | 35.0% | |
| CTGTGTTGTGATTTGAAAGA+TGG | + | chr4.1:33877327-33877346 | MS.gene056399:intron | 35.0% | |
| GCCTTTAAATGACAAACATG+AGG | - | chr4.1:33875790-33875809 | None:intergenic | 35.0% | |
| GTCGTACATTTGTTTCCAAA+AGG | + | chr4.1:33876696-33876715 | MS.gene056399:intron | 35.0% | |
| TCCTCCCCAAATATTACAAT+CGG | - | chr4.1:33876933-33876952 | None:intergenic | 35.0% | |
| TGATGCATTAGCAAACAATG+GGG | + | chr4.1:33876758-33876777 | MS.gene056399:intron | 35.0% | |
| TTTGCTTCTCTTGATCTTCA+CGG | - | chr4.1:33877451-33877470 | None:intergenic | 35.0% | |
| ! | AAACTTTGACTCGACCTAAA+AGG | + | chr4.1:33875745-33875764 | MS.gene056399:intron | 35.0% |
| ! | AAGGAGATTTTCCTAGAAGT+TGG | + | chr4.1:33876170-33876189 | MS.gene056399:intron | 35.0% |
| ! | CCACATTTTACAAGATCCAA+TGG | - | chr4.1:33876010-33876029 | None:intergenic | 35.0% |
| ! | CTCGAAGGTTTGAGAATTTT+AGG | - | chr4.1:33876906-33876925 | None:intergenic | 35.0% |
| ! | GCCTCATGTTTGTCATTTAA+AGG | + | chr4.1:33875786-33875805 | MS.gene056399:intron | 35.0% |
| !! | AGTGTGCCGATTGTAATATT+TGG | + | chr4.1:33876924-33876943 | MS.gene056399:intron | 35.0% |
| !! | CTTAATTGAGCATTGACCAT+TGG | + | chr4.1:33875991-33876010 | MS.gene056399:intron | 35.0% |
| !! | GTGTGCCGATTGTAATATTT+GGG | + | chr4.1:33876925-33876944 | MS.gene056399:intron | 35.0% |
| !! | TCATGATTCAAGTTTTGGCA+AGG | - | chr4.1:33875346-33875365 | None:intergenic | 35.0% |
| !! | TGTGCCGATTGTAATATTTG+GGG | + | chr4.1:33876926-33876945 | MS.gene056399:intron | 35.0% |
| AAGACAAGAGATGCTAGATC+AGG | + | chr4.1:33875834-33875853 | MS.gene056399:intron | 40.0% | |
| AGACAAGAGATGCTAGATCA+GGG | + | chr4.1:33875835-33875854 | MS.gene056399:intron | 40.0% | |
| AGCTGCATAAACCAACTTCT+AGG | - | chr4.1:33876184-33876203 | None:intergenic | 40.0% | |
| ATCGCAGCGAAGACAAAAAA+TGG | + | chr4.1:33876960-33876979 | MS.gene056399:intron | 40.0% | |
| GAAATTGTAACAAAGGTGGC+TGG | + | chr4.1:33875267-33875286 | MS.gene056399:intron | 40.0% | |
| GACCTAAAAGGTTCATGAGA+AGG | + | chr4.1:33875757-33875776 | MS.gene056399:intron | 40.0% | |
| GAGATCTTGAGCTAAGAGAT+TGG | - | chr4.1:33876349-33876368 | None:intergenic | 40.0% | |
| GATGCATTAGCAAACAATGG+GGG | + | chr4.1:33876759-33876778 | MS.gene056399:intron | 40.0% | |
| TACAACGTAAACAAGCTCAC+CGG | - | chr4.1:33875214-33875233 | None:intergenic | 40.0% | |
| TCAATGTCTTTCGTGTGTGT+TGG | + | chr4.1:33876636-33876655 | MS.gene056399:intron | 40.0% | |
| TGTAATATTTGGGGAGGAAG+AGG | + | chr4.1:33876935-33876954 | MS.gene056399:intron | 40.0% | |
| ! | ACCCTTCTCATGAACCTTTT+AGG | - | chr4.1:33875762-33875781 | None:intergenic | 40.0% |
| ! | AGGTTGATTATGGTTTGCAG+TGG | + | chr4.1:33875891-33875910 | MS.gene056399:intron | 40.0% |
| ! | GAAGTCGTTATTTCGTCCAT+CGG | + | chr4.1:33875925-33875944 | MS.gene056399:intron | 40.0% |
| ! | TTCAAATAACGGTTTGGGAG+TGG | - | chr4.1:33875250-33875269 | None:intergenic | 40.0% |
| ! | TTTTTCCTTCCGTATTGAGC+CGG | - | chr4.1:33876819-33876838 | None:intergenic | 40.0% |
| ATGCTAGATCAGGGTGAGAT+GGG | + | chr4.1:33875844-33875863 | MS.gene056399:intron | 45.0% | |
| ATGTCTTTCGTGTGTGTTGG+TGG | + | chr4.1:33876639-33876658 | MS.gene056399:intron | 45.0% | |
| ATTACAATCGGCACACTCGA+AGG | - | chr4.1:33876921-33876940 | None:intergenic | 45.0% | |
| GCCGATTGTAATATTTGGGG+AGG | + | chr4.1:33876929-33876948 | MS.gene056399:intron | 45.0% | |
| GTACTATCCTTATCCCAACG+CGG | - | chr4.1:33876844-33876863 | None:intergenic | 45.0% | |
| TACTATCCTTATCCCAACGC+GGG | - | chr4.1:33876843-33876862 | None:intergenic | 45.0% | |
| TTAGAGTTTGACGTCGCAGT+CGG | - | chr4.1:33875186-33875205 | None:intergenic | 45.0% | |
| TTTCGTCCATCGGATACGTT+TGG | + | chr4.1:33875935-33875954 | MS.gene056399:intron | 45.0% | |
| ! | CTTGAGCTAAGAGATTGGTC+TGG | - | chr4.1:33876344-33876363 | None:intergenic | 45.0% |
| ! | CTTGGTAAACCGGCTCAATA+CGG | + | chr4.1:33876807-33876826 | MS.gene056399:intron | 45.0% |
| !! | AGAGATTGGTCTGGTCCAAT+TGG | - | chr4.1:33876335-33876354 | None:intergenic | 45.0% |
| AAAAAGCCCGCGTTGGGATA+AGG | + | chr4.1:33876834-33876853 | MS.gene056399:intron | 50.0% | |
| GATGCTAGATCAGGGTGAGA+TGG | + | chr4.1:33875843-33875862 | MS.gene056399:intron | 50.0% | |
| GTAACAAAGGTGGCTGGAGT+GGG | + | chr4.1:33875273-33875292 | MS.gene056399:intron | 50.0% | |
| TGCTAGATCAGGGTGAGATG+GGG | + | chr4.1:33875845-33875864 | MS.gene056399:intron | 50.0% | |
| TGTAACAAAGGTGGCTGGAG+TGG | + | chr4.1:33875272-33875291 | MS.gene056399:intron | 50.0% | |
| TTGAAGCAATCACTTCCCCC+AGG | + | chr4.1:33877549-33877568 | MS.gene056399:CDS | 50.0% | |
| ! | GTAAACCGGCTCAATACGGA+AGG | + | chr4.1:33876811-33876830 | MS.gene056399:intron | 50.0% |
| ! | TCTTTCGTGTGTGTTGGTGG+TGG | + | chr4.1:33876642-33876661 | MS.gene056399:intron | 50.0% |
| !! | CTTTCGTGTGTGTTGGTGGT+GGG | + | chr4.1:33876643-33876662 | MS.gene056399:intron | 50.0% |
| ACTTCCTCCTCACTGCTAGG+AGG | + | chr4.1:33877412-33877431 | MS.gene056399:CDS | 55.0% | |
| AGGACTTCCTCCTCACTGCT+AGG | + | chr4.1:33877409-33877428 | MS.gene056399:CDS | 55.0% | |
| CATCCTTCCTCCTAGCAGTG+AGG | - | chr4.1:33877422-33877441 | None:intergenic | 55.0% | |
| CTAGATCAGGGTGAGATGGG+GGG | + | chr4.1:33875847-33875866 | MS.gene056399:intron | 55.0% | |
| GCTAGATCAGGGTGAGATGG+GGG | + | chr4.1:33875846-33875865 | MS.gene056399:intron | 55.0% | |
| GGAAGGAAAAAGCCCGCGTT+GGG | + | chr4.1:33876828-33876847 | MS.gene056399:intron | 55.0% | |
| CCTCCTCACTGCTAGGAGGA+AGG | + | chr4.1:33877416-33877435 | MS.gene056399:CDS | 60.0% | |
| CCTTCCTCCTAGCAGTGAGG+AGG | - | chr4.1:33877419-33877438 | None:intergenic | 60.0% | |
| CGGAAGGAAAAAGCCCGCGT+TGG | + | chr4.1:33876827-33876846 | MS.gene056399:intron | 60.0% | |
| !! | CGTGTGTGTTGGTGGTGGGC+TGG | + | chr4.1:33876647-33876666 | MS.gene056399:intron | 65.0% |
| !! | GTGTGTTGGTGGTGGGCTGG+TGG | + | chr4.1:33876650-33876669 | MS.gene056399:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 33875171 | 33877575 | 33875171 | ID=MS.gene056399 |
| chr4.1 | mRNA | 33875171 | 33877575 | 33875171 | ID=MS.gene056399.t1;Parent=MS.gene056399 |
| chr4.1 | exon | 33875171 | 33875281 | 33875171 | ID=MS.gene056399.t1.exon1;Parent=MS.gene056399.t1 |
| chr4.1 | CDS | 33875171 | 33875281 | 33875171 | ID=cds.MS.gene056399.t1;Parent=MS.gene056399.t1 |
| chr4.1 | exon | 33877387 | 33877575 | 33877387 | ID=MS.gene056399.t1.exon2;Parent=MS.gene056399.t1 |
| chr4.1 | CDS | 33877387 | 33877575 | 33877387 | ID=cds.MS.gene056399.t1;Parent=MS.gene056399.t1 |
| Gene Sequence |
| Protein sequence |
