AlfalfaGEDB | MS.gene056948

M. sativa cultivar XinJiangDaYe / MS.gene056948

KEGG: -
GO: GO:0003674 GO:0005488 GO:0008270 GO:0043167 GO:0043169 GO:0046872 GO:0046914
PFAM: PF14432.9 PF20430.1

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056948.t1	AES91415.2	99.4	160	1	0	1	160	858	1017	1.80E-88	335.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056948.t1	Q9FIB2	75.3	162	38	1	1	160	834	995	8.7e-68	257.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056948.t1	G7JU73	99.4	160	1	0	1	160	858	1017	1.3e-88	335.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene052582	MS.gene056948	0.806735	7.12E-50	-1.69E-46
MS.gene052584	MS.gene056948	0.808874	2.50E-50	-1.69E-46
MS.gene053226	MS.gene056948	0.800231	1.59E-48	-1.69E-46
MS.gene056948	MS.gene071322	0.804907	1.72E-49	-1.69E-46
MS.gene056948	MS.gene071570	0.800796	1.22E-48	-1.69E-46
MS.gene056948	MS.gene21200	0.804597	2.00E-49	-1.69E-46
MS.gene056948	MS.gene21700	0.805365	1.38E-49	-1.69E-46
MS.gene056948	MS.gene22270	0.802175	6.35E-49	-1.69E-46
MS.gene056948	MS.gene27041	0.808957	2.40E-50	-1.69E-46
MS.gene056948	MS.gene72008	0.809192	2.14E-50	-1.69E-46
MS.gene056948	MS.gene97766	0.806832	6.79E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056948.t1	MTR_4g113240	99.375	160	1	0	1	160	858	1017	2.22e-111	339
MS.gene056948.t1	MTR_3g105370	55.280	161	71	1	1	160	813	973	1.23e-60	201
MS.gene056948.t1	MTR_8g106950	59.006	161	65	1	1	160	606	766	2.02e-58	194
MS.gene056948.t1	MTR_1g073300	53.049	164	70	2	1	160	635	795	3.26e-58	194
MS.gene056948.t1	MTR_8g063290	55.625	160	71	0	1	160	500	659	7.30e-58	191
MS.gene056948.t1	MTR_2g086150	53.416	161	74	1	1	160	707	867	1.24e-56	190
MS.gene056948.t1	MTR_4g031160	52.795	161	75	1	1	160	679	839	1.33e-56	189
MS.gene056948.t1	MTR_8g088300	51.553	161	77	1	1	160	540	700	8.69e-55	183
MS.gene056948.t1	MTR_7g076020	50.311	161	79	1	1	160	648	808	5.28e-54	182
MS.gene056948.t1	MTR_1g007610	50.311	161	79	1	1	160	508	668	7.79e-54	180
MS.gene056948.t1	MTR_4g099480	53.416	161	74	1	1	160	474	634	1.93e-53	179
MS.gene056948.t1	MTR_7g092100	52.500	160	75	1	2	160	437	596	2.27e-53	178
MS.gene056948.t1	MTR_8g106910	54.037	161	73	1	1	160	574	734	2.89e-53	180
MS.gene056948.t1	MTR_3g029530	52.201	159	75	1	3	160	967	1125	1.11e-51	176
MS.gene056948.t1	MTR_8g105720	48.447	161	82	1	1	160	541	701	1.34e-51	174
MS.gene056948.t1	MTR_1g103840	50.000	160	79	1	2	160	623	782	1.39e-51	175
MS.gene056948.t1	MTR_5g031490	51.852	162	76	1	1	160	515	676	5.25e-51	172
MS.gene056948.t1	MTR_1g111020	48.447	161	82	1	1	160	700	860	7.25e-51	174
MS.gene056948.t1	MTR_2g035620	49.689	161	80	1	1	160	727	887	8.84e-51	174
MS.gene056948.t1	MTR_4g094502	47.205	161	84	1	1	160	493	653	1.28e-50	171
MS.gene056948.t1	MTR_7g083820	50.311	161	79	1	1	160	512	672	2.15e-50	171
MS.gene056948.t1	MTR_7g074040	48.765	162	80	3	1	160	547	707	4.74e-50	170
MS.gene056948.t1	MTR_8g065730	49.689	161	80	1	1	160	588	748	6.21e-50	171
MS.gene056948.t1	MTR_1g111670	46.584	161	85	1	1	160	470	630	7.19e-50	169
MS.gene056948.t1	MTR_1g103660	49.068	161	81	1	1	160	524	684	7.35e-50	169
MS.gene056948.t1	MTR_5g088310	49.068	161	81	1	1	160	524	684	7.73e-50	169
MS.gene056948.t1	MTR_1g040635	49.689	161	80	1	1	160	577	737	8.44e-50	170
MS.gene056948.t1	MTR_7g076350	50.000	154	76	1	8	160	534	687	3.44e-49	169
MS.gene056948.t1	MTR_1g059720	49.080	163	79	2	1	160	413	574	4.03e-49	166
MS.gene056948.t1	MTR_7g011030	47.826	161	83	1	1	160	540	700	4.57e-49	167
MS.gene056948.t1	MTR_2g094430	47.826	161	83	1	1	160	518	678	5.23e-49	167
MS.gene056948.t1	MTR_4g095065	46.584	161	85	1	1	160	466	626	1.61e-48	165
MS.gene056948.t1	MTR_3g027990	42.857	161	91	1	1	160	463	623	2.13e-48	165
MS.gene056948.t1	MTR_1g059280	46.584	161	85	1	1	160	272	432	4.14e-48	161
MS.gene056948.t1	MTR_7g037430	49.351	154	77	1	8	160	799	952	4.75e-48	166
MS.gene056948.t1	MTR_8g069550	49.068	161	81	1	1	160	597	757	6.33e-48	165
MS.gene056948.t1	MTR_3g011950	49.068	161	80	2	1	160	651	810	8.30e-48	165
MS.gene056948.t1	MTR_5g095690	49.689	161	80	1	1	160	651	811	1.74e-47	164
MS.gene056948.t1	MTR_7g079860	44.720	161	88	1	1	160	595	755	1.84e-47	164
MS.gene056948.t1	MTR_1g059280	46.584	161	85	1	1	160	456	616	3.53e-47	161
MS.gene056948.t1	MTR_5g040920	50.955	157	75	2	6	160	430	586	3.82e-47	161
MS.gene056948.t1	MTR_2g018870	47.826	161	83	1	1	160	453	613	3.83e-47	161
MS.gene056948.t1	MTR_8g107740	42.857	161	91	1	1	160	625	785	4.43e-47	163
MS.gene056948.t1	MTR_5g008600	48.750	160	81	1	1	159	509	668	5.16e-47	163
MS.gene056948.t1	MTR_4g094645	50.968	155	75	1	1	154	498	652	1.39e-46	160
MS.gene056948.t1	MTR_4g130500	50.323	155	76	1	7	160	629	783	1.89e-46	161
MS.gene056948.t1	MTR_4g094658	50.649	154	75	1	1	153	517	670	3.37e-46	160
MS.gene056948.t1	MTR_4g113830	49.068	161	81	1	1	160	578	738	4.56e-46	160
MS.gene056948.t1	MTR_3g434800	46.667	165	83	2	1	160	560	724	6.10e-46	159
MS.gene056948.t1	MTR_7g089260	47.468	158	82	1	1	157	638	795	1.97e-45	159
MS.gene056948.t1	MTR_2g042550	50.311	161	79	1	1	160	580	740	2.28e-45	158
MS.gene056948.t1	MTR_2g101710	46.584	161	85	1	1	160	460	620	2.33e-45	157
MS.gene056948.t1	MTR_8g089940	47.205	161	83	1	1	159	540	700	1.71e-44	155
MS.gene056948.t1	MTR_1g012380	45.342	161	87	1	1	160	440	600	1.46e-43	152
MS.gene056948.t1	MTR_6g075280	41.875	160	92	1	1	159	447	606	1.59e-43	152
MS.gene056948.t1	MTR_3g098280	45.513	156	84	1	6	160	399	554	2.24e-43	150
MS.gene056948.t1	MTR_0013s0120	44.720	161	88	1	1	160	398	558	4.09e-43	150
MS.gene056948.t1	MTR_7g023780	41.615	161	93	1	1	160	559	719	1.02e-42	150
MS.gene056948.t1	MTR_8g086040	44.720	161	87	2	2	160	456	616	1.52e-42	149
MS.gene056948.t1	MTR_2g436470	44.720	161	88	1	1	160	343	503	1.52e-42	147
MS.gene056948.t1	MTR_5g008260	41.212	165	92	1	1	160	610	774	2.39e-42	149
MS.gene056948.t1	MTR_4g086270	53.077	130	57	3	32	160	439	565	2.64e-42	148
MS.gene056948.t1	MTR_5g006570	42.857	161	91	1	1	160	678	838	3.89e-42	149
MS.gene056948.t1	MTR_5g006420	42.857	161	91	1	1	160	566	726	5.02e-42	148
MS.gene056948.t1	MTR_5g049780	48.148	162	68	2	1	160	515	662	1.14e-41	147
MS.gene056948.t1	MTR_2g058990	44.720	161	88	1	1	160	815	975	1.24e-41	148
MS.gene056948.t1	MTR_5g044260	44.444	162	88	2	1	160	404	565	2.65e-41	145
MS.gene056948.t1	MTR_1g071240	43.125	160	89	2	3	160	767	926	2.96e-41	147
MS.gene056948.t1	MTR_6g060510	47.273	165	78	4	1	159	456	617	7.11e-41	145
MS.gene056948.t1	MTR_6g092220	56.637	113	48	1	49	160	303	415	1.09e-40	141
MS.gene056948.t1	MTR_6g091880	56.637	113	48	1	49	160	334	446	1.24e-40	141
MS.gene056948.t1	MTR_3g052720	47.436	156	81	1	1	155	652	807	1.31e-40	145
MS.gene056948.t1	MTR_5g027980	43.478	161	90	1	1	160	286	446	1.48e-40	141
MS.gene056948.t1	MTR_6g034150	56.637	113	48	1	49	160	339	451	2.14e-40	141
MS.gene056948.t1	MTR_1g040535	44.720	161	81	2	1	160	522	675	2.84e-40	143
MS.gene056948.t1	MTR_3g011940	48.252	143	72	2	1	142	633	774	2.94e-40	144
MS.gene056948.t1	MTR_1g040705	52.419	124	58	1	38	160	490	613	4.97e-40	142
MS.gene056948.t1	MTR_6g460480	48.052	154	74	3	13	160	286	439	6.86e-40	139
MS.gene056948.t1	MTR_1g040705	52.419	124	58	1	38	160	579	702	6.97e-40	142
MS.gene056948.t1	MTR_4g119420	46.296	162	84	3	2	160	428	589	7.34e-40	141
MS.gene056948.t1	MTR_1g040705	52.419	124	58	1	38	160	590	713	7.78e-40	142
MS.gene056948.t1	MTR_5g042450	52.419	124	58	1	38	160	579	702	1.26e-39	142
MS.gene056948.t1	MTR_3g117150	45.342	161	87	1	1	160	411	571	1.30e-39	140
MS.gene056948.t1	MTR_6g022140	45.513	156	82	3	6	159	573	727	1.66e-39	142
MS.gene056948.t1	MTR_3g084440	44.099	161	89	1	1	160	456	616	1.87e-39	140
MS.gene056948.t1	MTR_0493s0010	44.242	165	84	3	1	160	450	611	2.42e-39	140
MS.gene056948.t1	MTR_6g022140	45.513	156	82	3	6	159	573	727	2.50e-39	141
MS.gene056948.t1	MTR_7g016960	41.975	162	91	2	1	160	494	654	3.22e-39	140
MS.gene056948.t1	MTR_4g085110	49.351	154	77	1	8	160	661	814	4.23e-39	140
MS.gene056948.t1	MTR_1g059810	44.785	163	81	3	1	160	477	633	7.32e-39	139
MS.gene056948.t1	MTR_4g088840	44.720	161	88	1	1	160	431	591	1.72e-38	137
MS.gene056948.t1	MTR_1g111020	43.357	143	80	1	1	142	700	842	5.48e-37	134
MS.gene056948.t1	MTR_6g012850	40.588	170	91	2	1	160	468	637	6.08e-37	134
MS.gene056948.t1	MTR_3g012530	37.267	161	99	2	1	160	537	696	2.04e-36	132
MS.gene056948.t1	MTR_1g039030	39.375	160	88	3	1	159	723	874	2.24e-36	132
MS.gene056948.t1	MTR_4g086490	40.373	161	95	1	1	160	984	1144	5.79e-36	131
MS.gene056948.t1	MTR_7g106930	42.667	150	85	1	1	149	297	446	2.98e-35	128
MS.gene056948.t1	MTR_2g021850	48.387	124	62	2	38	160	357	479	4.19e-35	127
MS.gene056948.t1	MTR_4g011570	41.250	160	90	3	1	158	713	870	7.84e-35	128
MS.gene056948.t1	MTR_8g086560	40.373	161	95	1	1	160	709	869	8.29e-35	128
MS.gene056948.t1	MTR_8g027810	37.888	161	99	1	1	160	777	937	1.29e-34	127
MS.gene056948.t1	MTR_6g060470	55.752	113	48	2	50	160	291	403	1.88e-33	122
MS.gene056948.t1	MTR_6g024410	52.577	97	45	1	65	160	2	98	3.18e-33	114
MS.gene056948.t1	MTR_5g025700	52.577	97	45	1	65	160	2	98	4.99e-33	115
MS.gene056948.t1	MTR_7g103230	39.623	159	95	1	1	158	715	873	7.60e-33	122
MS.gene056948.t1	MTR_6g092170	49.550	111	54	2	50	159	321	430	1.35e-31	117
MS.gene056948.t1	MTR_6g032915	44.286	140	77	1	1	139	900	1039	1.74e-31	119
MS.gene056948.t1	MTR_2g022040	42.308	130	74	1	32	160	295	424	4.54e-31	115
MS.gene056948.t1	MTR_2g064660	38.028	142	60	2	19	160	25	138	4.50e-27	99.4
MS.gene056948.t1	MTR_5g071190	43.972	141	72	3	22	160	752	887	4.81e-27	106
MS.gene056948.t1	MTR_1g099590	36.242	149	80	4	13	160	745	879	5.09e-24	97.8
MS.gene056948.t1	MTR_5g067140	35.443	158	100	2	2	158	609	765	1.15e-23	96.7
MS.gene056948.t1	MTR_1g040565	41.584	101	59	0	1	101	412	512	1.01e-22	93.6
MS.gene056948.t1	MTR_1g040585	41.584	101	59	0	1	101	469	569	1.01e-22	94.0
MS.gene056948.t1	MTR_2g082550	35.971	139	51	3	8	145	480	581	1.82e-20	87.4
MS.gene056948.t1	MTR_8g106955	38.000	150	73	5	13	160	22	153	6.02e-20	81.3
MS.gene056948.t1	MTR_7g417770	36.364	99	60	1	1	99	786	881	2.29e-17	78.6
MS.gene056948.t1	MTR_7g017700	36.364	99	60	1	1	99	786	881	2.29e-17	78.6
MS.gene056948.t1	MTR_4g094592	46.269	67	36	0	6	72	560	626	5.76e-16	74.3
MS.gene056948.t1	MTR_3g096420	44.595	74	41	0	1	74	603	676	5.82e-16	74.3
MS.gene056948.t1	MTR_7g100810	36.782	87	55	0	1	87	683	769	1.37e-15	73.6
MS.gene056948.t1	MTR_7g113540	35.227	88	56	1	1	88	564	650	3.58e-14	69.3
MS.gene056948.t1	MTR_4g108890	40.244	82	49	0	1	82	466	547	2.17e-13	67.0
MS.gene056948.t1	MTR_6g065190	52.239	67	31	1	94	159	334	400	7.10e-13	65.5
MS.gene056948.t1	MTR_8g105210	39.241	79	48	0	1	79	793	871	1.23e-12	65.1
MS.gene056948.t1	MTR_6g065160	73.684	38	10	0	111	148	79	116	6.03e-12	59.7
MS.gene056948.t1	MTR_4g131300	40.278	72	43	0	1	72	633	704	1.01e-11	62.4
MS.gene056948.t1	MTR_1g084570	38.554	83	51	0	3	85	524	606	1.46e-11	61.6
MS.gene056948.t1	MTR_4g032895	40.299	67	40	0	1	67	860	926	1.95e-11	61.6
MS.gene056948.t1	MTR_1g007600	37.879	66	41	0	1	66	753	818	2.41e-11	61.2
MS.gene056948.t1	MTR_8g066670	29.730	148	89	4	1	139	800	941	2.79e-11	61.2
MS.gene056948.t1	MTR_5g098860	38.356	73	45	0	1	73	743	815	5.25e-11	60.1
MS.gene056948.t1	MTR_7g056073	36.250	80	50	1	1	79	455	534	6.96e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056948.t1	AT5G09950	75.309	162	38	1	1	160	828	989	8.58e-82	260
MS.gene056948.t1	AT5G09950	75.309	162	38	1	1	160	834	995	8.60e-82	260
MS.gene056948.t1	AT5G09950	75.309	162	38	1	1	160	834	995	8.60e-82	260
MS.gene056948.t1	AT4G33170	51.553	161	77	1	1	160	830	990	1.12e-55	188
MS.gene056948.t1	AT2G22070	52.174	161	76	1	1	160	626	786	6.24e-55	184
MS.gene056948.t1	AT4G02750	52.174	161	76	1	1	160	621	781	2.79e-54	182
MS.gene056948.t1	AT1G09410	53.704	162	73	2	1	160	544	705	3.21e-54	182
MS.gene056948.t1	AT5G16860	53.416	161	74	1	1	160	690	850	5.02e-54	182
MS.gene056948.t1	AT3G24000	48.447	161	82	1	1	160	473	633	1.22e-53	179
MS.gene056948.t1	AT3G23330	49.689	161	80	1	1	160	446	606	2.50e-53	178
MS.gene056948.t1	AT3G23330	49.689	161	80	1	1	160	555	715	4.52e-53	179
MS.gene056948.t1	AT1G25360	50.617	162	78	2	1	160	629	790	1.78e-52	178
MS.gene056948.t1	AT3G57430	52.174	161	76	1	1	160	730	890	1.42e-51	176
MS.gene056948.t1	AT2G41080	54.037	161	73	1	1	160	490	650	2.88e-51	173
MS.gene056948.t1	AT2G27610	49.383	162	80	2	1	160	707	868	4.40e-51	174
MS.gene056948.t1	AT3G08820	49.068	161	81	1	1	160	525	685	6.38e-51	172
MS.gene056948.t1	AT1G20230	45.342	161	87	1	1	160	600	760	1.38e-50	172
MS.gene056948.t1	AT3G49142	48.795	166	79	1	1	160	521	686	1.39e-50	172
MS.gene056948.t1	AT3G62890	50.311	161	79	1	1	160	413	573	3.37e-50	169
MS.gene056948.t1	AT5G39680	48.447	161	82	1	1	160	550	710	3.83e-50	171
MS.gene056948.t1	AT5G52630	49.375	160	80	1	2	160	429	588	1.01e-49	168
MS.gene056948.t1	AT4G30700	49.068	161	81	1	1	160	632	792	1.03e-49	170
MS.gene056948.t1	AT4G21065	48.447	161	82	1	1	160	302	462	1.10e-49	166
MS.gene056948.t1	AT5G46460	50.932	161	76	2	1	160	539	697	1.37e-49	169
MS.gene056948.t1	AT2G01510	49.068	161	81	1	1	160	424	584	1.39e-49	167
MS.gene056948.t1	AT2G01510	49.068	161	81	1	1	160	424	584	1.39e-49	167
MS.gene056948.t1	AT3G02010	48.447	161	82	1	1	160	665	825	3.79e-49	169
MS.gene056948.t1	AT5G48910	49.689	161	80	1	1	160	486	646	4.36e-49	167
MS.gene056948.t1	AT4G21065	48.447	161	82	1	1	160	435	595	5.32e-49	166
MS.gene056948.t1	AT3G13770	47.826	161	83	1	1	160	435	595	1.15e-48	165
MS.gene056948.t1	AT3G49170	49.091	165	79	2	1	160	686	850	1.16e-48	167
MS.gene056948.t1	AT2G03880	47.205	161	84	1	1	160	470	630	1.39e-48	166
MS.gene056948.t1	AT3G13770	47.826	161	83	1	1	160	468	628	1.58e-48	165
MS.gene056948.t1	AT4G33990	49.689	161	80	1	1	160	663	823	1.58e-48	167
MS.gene056948.t1	AT4G33990	49.689	161	80	1	1	160	656	816	1.59e-48	167
MS.gene056948.t1	AT4G37170	49.689	161	80	1	1	160	531	691	2.52e-48	166
MS.gene056948.t1	AT4G14850	49.686	159	79	1	3	160	526	684	2.63e-48	166
MS.gene056948.t1	AT1G16480	47.826	161	83	1	1	160	777	937	4.27e-48	166
MS.gene056948.t1	AT1G68930	48.447	161	82	1	1	160	557	717	6.29e-48	165
MS.gene056948.t1	AT1G68930	48.447	161	82	1	1	160	583	743	6.68e-48	165
MS.gene056948.t1	AT1G11290	48.447	161	81	2	1	160	650	809	1.24e-47	164
MS.gene056948.t1	AT4G37380	45.963	161	86	1	1	160	472	632	2.22e-47	162
MS.gene056948.t1	AT1G56690	48.765	162	81	2	1	160	543	704	4.19e-47	162
MS.gene056948.t1	AT3G63370	48.125	160	81	2	3	160	801	960	4.19e-47	163
MS.gene056948.t1	AT3G26782	47.205	161	84	1	1	160	499	659	1.66e-46	160
MS.gene056948.t1	AT5G65570	47.826	161	83	1	1	160	578	738	9.61e-46	159
MS.gene056948.t1	AT4G16835	50.311	161	79	1	1	160	496	656	1.45e-45	157
MS.gene056948.t1	AT3G12770	44.099	161	89	1	1	160	534	694	1.80e-45	158
MS.gene056948.t1	AT2G29760	48.466	163	80	3	1	160	577	738	1.95e-45	158
MS.gene056948.t1	AT4G14050	46.914	162	84	2	1	160	398	559	1.97e-45	156
MS.gene056948.t1	AT4G14050	46.914	162	84	2	1	160	451	612	4.29e-45	156
MS.gene056948.t1	AT5G04780	46.584	161	85	1	1	160	475	635	7.16e-45	155
MS.gene056948.t1	AT5G40410	47.531	162	83	2	1	160	447	608	8.18e-45	155
MS.gene056948.t1	AT1G34160	46.341	164	84	1	1	160	371	534	9.00e-45	154
MS.gene056948.t1	AT5G40405	44.720	161	88	1	1	160	452	612	1.10e-44	155
MS.gene056948.t1	AT5G40405	44.720	161	88	1	1	160	452	612	1.10e-44	155
MS.gene056948.t1	AT1G34160	46.341	164	84	1	1	160	418	581	1.58e-44	154
MS.gene056948.t1	AT4G13650	43.478	161	90	1	1	160	904	1064	4.03e-44	155
MS.gene056948.t1	AT5G66520	47.531	162	83	2	1	160	459	620	7.73e-44	152
MS.gene056948.t1	AT5G15340	45.399	163	86	2	1	160	461	623	3.36e-43	151
MS.gene056948.t1	AT4G18750	46.584	161	85	1	1	160	711	871	3.43e-43	152
MS.gene056948.t1	AT1G08070	45.963	161	86	1	1	160	477	637	1.72e-42	149
MS.gene056948.t1	AT1G08070	45.963	161	86	1	1	160	581	741	2.43e-42	149
MS.gene056948.t1	AT3G47530	44.720	161	87	2	2	160	431	591	2.79e-42	148
MS.gene056948.t1	AT1G16480	45.283	159	86	1	1	158	760	918	3.04e-42	149
MS.gene056948.t1	AT2G33760	42.500	160	92	0	1	160	424	583	4.62e-42	147
MS.gene056948.t1	AT5G13230	45.679	162	86	1	1	160	661	822	7.42e-42	148
MS.gene056948.t1	AT3G49710	44.848	165	85	3	1	160	558	721	1.11e-41	147
MS.gene056948.t1	AT1G47580	57.143	112	47	1	50	160	128	239	1.17e-41	139
MS.gene056948.t1	AT5G50990	43.478	161	90	1	1	160	374	534	2.43e-41	145
MS.gene056948.t1	AT3G14330	43.636	165	85	3	1	160	549	710	2.58e-41	146
MS.gene056948.t1	AT3G22690	41.615	161	93	1	1	160	651	811	2.89e-41	147
MS.gene056948.t1	AT3G22690	41.615	161	93	1	1	160	682	842	3.50e-41	146
MS.gene056948.t1	AT1G18485	45.963	161	86	1	1	160	810	970	5.19e-41	146
MS.gene056948.t1	AT1G59720	44.172	163	88	3	1	160	476	638	7.12e-41	145
MS.gene056948.t1	AT5G06540	45.679	162	86	2	1	160	461	622	1.10e-40	144
MS.gene056948.t1	AT1G04840	43.125	160	90	1	2	160	506	665	2.36e-40	143
MS.gene056948.t1	AT3G46790	43.827	162	88	2	1	160	497	657	5.50e-40	142
MS.gene056948.t1	AT3G03580	44.720	161	87	2	2	160	722	882	7.31e-40	142
MS.gene056948.t1	AT3G22690	41.250	160	93	1	1	159	682	841	1.31e-39	142
MS.gene056948.t1	AT4G14820	43.114	167	88	1	1	160	556	722	3.22e-39	140
MS.gene056948.t1	AT5G44230	41.975	162	92	2	1	160	399	560	1.03e-38	138
MS.gene056948.t1	AT5G44230	41.975	162	92	2	1	160	496	657	1.44e-38	138
MS.gene056948.t1	AT2G02980	42.593	162	91	2	1	160	442	603	2.05e-38	137
MS.gene056948.t1	AT4G15720	42.169	166	89	2	2	160	451	616	1.37e-37	135
MS.gene056948.t1	AT5G13270	39.877	163	86	2	1	160	599	752	5.36e-37	134
MS.gene056948.t1	AT3G56550	43.030	165	86	3	1	160	420	581	1.98e-36	132
MS.gene056948.t1	AT3G56550	43.030	165	86	3	1	160	420	581	1.98e-36	132
MS.gene056948.t1	AT5G03800	40.123	162	95	2	1	160	735	896	2.38e-36	132
MS.gene056948.t1	AT1G31920	40.994	161	94	1	1	160	446	606	2.46e-36	132
MS.gene056948.t1	AT4G01030	42.208	154	88	1	8	160	615	768	6.10e-36	131
MS.gene056948.t1	AT1G74630	46.584	161	84	2	2	160	483	643	4.58e-35	129
MS.gene056948.t1	AT1G74630	46.584	161	84	2	2	160	498	658	4.83e-35	129
MS.gene056948.t1	AT3G15130	43.030	165	89	2	1	160	525	689	5.37e-35	129
MS.gene056948.t1	AT4G32450	48.800	125	63	1	37	160	413	537	1.92e-34	126
MS.gene056948.t1	AT3G61170	46.565	131	69	1	1	130	607	737	8.13e-34	125
MS.gene056948.t1	AT2G25580	43.750	144	79	2	18	160	473	615	1.41e-33	124
MS.gene056948.t1	AT2G25580	43.750	144	79	2	18	160	473	615	1.41e-33	124
MS.gene056948.t1	AT1G15510	38.994	159	96	1	1	158	708	866	2.04e-33	124
MS.gene056948.t1	AT5G50390	41.304	138	76	2	28	160	564	701	2.74e-33	124
MS.gene056948.t1	AT1G71420	44.937	158	77	4	13	160	588	745	5.47e-33	123
MS.gene056948.t1	AT3G11460	42.767	159	76	4	7	160	475	623	2.08e-32	121
MS.gene056948.t1	AT2G15690	50.943	106	50	2	56	160	475	579	5.06e-32	120
MS.gene056948.t1	AT1G19720	38.554	166	89	4	1	160	736	894	6.60e-26	103
MS.gene056948.t1	AT1G29710	36.364	121	76	1	41	160	355	475	6.89e-24	97.1
MS.gene056948.t1	AT4G35130	31.288	163	108	3	1	160	643	804	1.98e-22	93.2
MS.gene056948.t1	AT2G34370	39.370	127	73	2	35	160	346	469	2.50e-21	89.7
MS.gene056948.t1	AT4G21300	38.462	78	48	0	2	79	756	833	6.02e-14	68.9
MS.gene056948.t1	AT3G02330	41.892	74	40	1	1	71	816	889	1.75e-13	67.4
MS.gene056948.t1	AT3G14730	40.845	71	42	0	1	71	579	649	2.83e-13	66.6
MS.gene056948.t1	AT3G53360	43.284	67	38	0	1	67	685	751	2.93e-13	66.6
MS.gene056948.t1	AT3G53360	43.284	67	38	0	1	67	685	751	2.93e-13	66.6
MS.gene056948.t1	AT5G52850	28.481	158	99	4	1	156	740	885	5.58e-13	65.9
MS.gene056948.t1	AT1G71490	43.662	71	39	1	1	70	594	664	7.45e-13	65.5
MS.gene056948.t1	AT3G63370	44.444	63	35	0	3	65	801	863	1.36e-12	64.7
MS.gene056948.t1	AT5G59200	37.879	66	41	0	1	66	467	532	1.65e-12	64.7
MS.gene056948.t1	AT2G13600	42.424	66	38	0	1	66	604	669	1.79e-12	64.3
MS.gene056948.t1	AT2G35030	43.939	66	37	0	1	66	545	610	2.93e-12	63.9
MS.gene056948.t1	AT1G56570	36.145	83	53	0	1	83	527	609	3.75e-11	60.5
MS.gene056948.t1	AT1G56570	36.145	83	53	0	1	83	527	609	3.75e-11	60.5
MS.gene056948.t1	AT5G08490	38.806	67	41	0	1	67	744	810	4.57e-11	60.5
MS.gene056948.t1	AT5G08490	38.806	67	41	0	1	67	779	845	4.78e-11	60.5
MS.gene056948.t1	AT5G08490	38.806	67	41	0	1	67	779	845	4.78e-11	60.5
MS.gene056948.t1	AT5G08490	38.806	67	41	0	1	67	779	845	4.78e-11	60.5
MS.gene056948.t1	AT3G15930	36.250	80	51	0	1	80	580	659	8.90e-11	59.7

Find 35 sgRNAs with CRISPR-Local

Find 38 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCAAATAGATTTCACCATTT+TGG	0.167297	8.4:+15397142	MS.gene056948:CDS
CAGATCATAGAGTGCATATT+TGG	0.193172	8.4:-15396936	None:intergenic
TAGAGTGCATATTTGGTTTC+AGG	0.197416	8.4:-15396929	None:intergenic
GCAAATCTGAACTGCCAATT+AGG	0.279282	8.4:+15397029	MS.gene056948:CDS
TGTGTTCTTGTGGGGATTAT+TGG	0.279983	8.4:+15397173	MS.gene056948:CDS
AGGTTCTTCATTATCCTAAT+TGG	0.307624	8.4:-15397043	None:intergenic
TGCATGCTGCTGGTGGGAAT+TGG	0.352097	8.4:+15396717	MS.gene056948:CDS
AACACATGCCACCACCAAAA+TGG	0.361457	8.4:-15397156	None:intergenic
GTGGTGGCATGTGTTCTTGT+GGG	0.376926	8.4:+15397164	MS.gene056948:CDS
TAGGATAATGAAGAACCTTC+GGG	0.404456	8.4:+15397048	MS.gene056948:CDS
GGAGTTCATTTGTTTGTGGC+TGG	0.418816	8.4:+15396824	MS.gene056948:CDS
TTAGGATAATGAAGAACCTT+CGG	0.421130	8.4:+15397047	MS.gene056948:CDS
ATGAAGAACCTTCGGGTTTG+TGG	0.428744	8.4:+15397055	MS.gene056948:CDS
GCATGCTGCTGGTGGGAATT+GGG	0.441665	8.4:+15396718	MS.gene056948:CDS
CAAATATGCACTCTATGATC+TGG	0.444530	8.4:+15396937	MS.gene056948:CDS
AAATACATATCAAAGATTGT+TGG	0.457928	8.4:+15397097	MS.gene056948:CDS
GGTGGTGGCATGTGTTCTTG+TGG	0.458110	8.4:+15397163	MS.gene056948:CDS
GGGAAGATGTGGTAGAAGCT+AGG	0.458411	8.4:+15396738	MS.gene056948:CDS
CTTTCTAACATGCATGCTGC+TGG	0.459375	8.4:+15396707	None:intergenic
ATGAACAAAATGAGGGATGC+TGG	0.461452	8.4:+15396899	MS.gene056948:CDS
AGAAAGATGCTGGATGTAGC+TGG	0.484579	8.4:+15396786	MS.gene056948:CDS
AGGAGCTAATGAACAAAATG+AGG	0.506060	8.4:+15396891	MS.gene056948:CDS
GGATGGAGTTCATTTGTTTG+TGG	0.517679	8.4:+15396820	MS.gene056948:CDS
TCTAACATGCATGCTGCTGG+TGG	0.544065	8.4:+15396710	None:intergenic
AGATGTGGTAGAAGCTAGGT+TGG	0.548127	8.4:+15396742	MS.gene056948:CDS
TGGTGGCATGTGTTCTTGTG+GGG	0.552113	8.4:+15397165	MS.gene056948:CDS
GCAGCAGTGAAGAAAGATGC+TGG	0.557486	8.4:+15396776	MS.gene056948:CDS
AGCTGGGTCAACATGAAGGA+TGG	0.582650	8.4:+15396803	MS.gene056948:CDS
CTAACATGCATGCTGCTGGT+GGG	0.605761	8.4:+15396711	None:intergenic
TGGTGGGAATTGGGAAGATG+TGG	0.616973	8.4:+15396727	MS.gene056948:CDS
TAGAAGCTAGGTTGGCAATG+AGG	0.624180	8.4:+15396750	MS.gene056948:CDS
GGAGCTAATGAACAAAATGA+GGG	0.636189	8.4:+15396892	MS.gene056948:CDS
ATGTAGCTGGGTCAACATGA+AGG	0.637900	8.4:+15396799	MS.gene056948:CDS
GAAAGATGCTGGATGTAGCT+GGG	0.650644	8.4:+15396787	MS.gene056948:CDS
GACAGTCACCACAAACCCGA+AGG	0.659881	8.4:-15397063	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATACATATCAAAGATTGT+TGG	+	chr8.4:15397097-15397116	MS.gene056948:CDS	20.0%
!!!	CATAGATTTTTTCTTTTTCA+GGG	-	chr8.4:15396862-15396881	None:intergenic	20.0%
!!!	TCATAGATTTTTTCTTTTTC+AGG	-	chr8.4:15396863-15396882	None:intergenic	20.0%
!	AAAAATCTATGAAAAGCTCA+AGG	+	chr8.4:15396871-15396890	MS.gene056948:CDS	25.0%
!!	TCAAATAGATTTCACCATTT+TGG	+	chr8.4:15397142-15397161	MS.gene056948:CDS	25.0%
	AGGTTCTTCATTATCCTAAT+TGG	-	chr8.4:15397046-15397065	None:intergenic	30.0%
	TTAGGATAATGAAGAACCTT+CGG	+	chr8.4:15397047-15397066	MS.gene056948:CDS	30.0%
!	AATAGATTTCACCATTTTGG+TGG	+	chr8.4:15397145-15397164	MS.gene056948:CDS	30.0%
!	GTTTTTCACTATGATAGCTA+AGG	-	chr8.4:15396985-15397004	None:intergenic	30.0%
	AGGAGCTAATGAACAAAATG+AGG	+	chr8.4:15396891-15396910	MS.gene056948:CDS	35.0%
	CAAATATGCACTCTATGATC+TGG	+	chr8.4:15396937-15396956	MS.gene056948:CDS	35.0%
	CAGATCATAGAGTGCATATT+TGG	-	chr8.4:15396939-15396958	None:intergenic	35.0%
	GGAGCTAATGAACAAAATGA+GGG	+	chr8.4:15396892-15396911	MS.gene056948:CDS	35.0%
	TAGGATAATGAAGAACCTTC+GGG	+	chr8.4:15397048-15397067	MS.gene056948:CDS	35.0%
!	TAGAGTGCATATTTGGTTTC+AGG	-	chr8.4:15396932-15396951	None:intergenic	35.0%
	ATGAACAAAATGAGGGATGC+TGG	+	chr8.4:15396899-15396918	MS.gene056948:CDS	40.0%
	GCAAATCTGAACTGCCAATT+AGG	+	chr8.4:15397029-15397048	MS.gene056948:CDS	40.0%
	GGATGGAGTTCATTTGTTTG+TGG	+	chr8.4:15396820-15396839	MS.gene056948:CDS	40.0%
	TGTGTTCTTGTGGGGATTAT+TGG	+	chr8.4:15397173-15397192	MS.gene056948:CDS	40.0%
!!	AGATTTCACCATTTTGGTGG+TGG	+	chr8.4:15397148-15397167	MS.gene056948:CDS	40.0%
	AACACATGCCACCACCAAAA+TGG	-	chr8.4:15397159-15397178	None:intergenic	45.0%
	AGAAAGATGCTGGATGTAGC+TGG	+	chr8.4:15396786-15396805	MS.gene056948:CDS	45.0%
	AGATGTGGTAGAAGCTAGGT+TGG	+	chr8.4:15396742-15396761	MS.gene056948:CDS	45.0%
	ATGTAGCTGGGTCAACATGA+AGG	+	chr8.4:15396799-15396818	MS.gene056948:CDS	45.0%
	GAAAGATGCTGGATGTAGCT+GGG	+	chr8.4:15396787-15396806	MS.gene056948:CDS	45.0%
	GGAGTTCATTTGTTTGTGGC+TGG	+	chr8.4:15396824-15396843	MS.gene056948:CDS	45.0%
!	ATGAAGAACCTTCGGGTTTG+TGG	+	chr8.4:15397055-15397074	MS.gene056948:CDS	45.0%
!	TAGAAGCTAGGTTGGCAATG+AGG	+	chr8.4:15396750-15396769	MS.gene056948:CDS	45.0%
	AGCTGGGTCAACATGAAGGA+TGG	+	chr8.4:15396803-15396822	MS.gene056948:CDS	50.0%
	GCAGCAGTGAAGAAAGATGC+TGG	+	chr8.4:15396776-15396795	MS.gene056948:CDS	50.0%
	GGGAAGATGTGGTAGAAGCT+AGG	+	chr8.4:15396738-15396757	MS.gene056948:CDS	50.0%
	GTGGTGGCATGTGTTCTTGT+GGG	+	chr8.4:15397164-15397183	MS.gene056948:CDS	50.0%
	TGGTGGCATGTGTTCTTGTG+GGG	+	chr8.4:15397165-15397184	MS.gene056948:CDS	50.0%
	TGGTGGGAATTGGGAAGATG+TGG	+	chr8.4:15396727-15396746	MS.gene056948:CDS	50.0%
	GACAGTCACCACAAACCCGA+AGG	-	chr8.4:15397066-15397085	None:intergenic	55.0%
	GCATGCTGCTGGTGGGAATT+GGG	+	chr8.4:15396718-15396737	MS.gene056948:CDS	55.0%
	TGCATGCTGCTGGTGGGAAT+TGG	+	chr8.4:15396717-15396736	MS.gene056948:CDS	55.0%
!	GGTGGTGGCATGTGTTCTTG+TGG	+	chr8.4:15397163-15397182	MS.gene056948:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.4	gene	15396716	15397198	15396716	ID=MS.gene056948
chr8.4	mRNA	15396716	15397198	15396716	ID=MS.gene056948.t1;Parent=MS.gene056948
chr8.4	exon	15396716	15397198	15396716	ID=MS.gene056948.t1.exon1;Parent=MS.gene056948.t1
chr8.4	CDS	15396716	15397198	15396716	ID=cds.MS.gene056948.t1;Parent=MS.gene056948.t1

Gene Sequence

>MS.gene056948

ATGCATGCTGCTGGTGGGAATTGGGAAGATGTGGTAGAAGCTAGGTTGGCAATGAGGAAAGCAGCAGTGAAGAAAGATGCTGGATGTAGCTGGGTCAACATGAAGGATGGAGTTCATTTGTTTGTGGCTGGAGATCAAACACACCCTGAAAAAGAAAAAATCTATGAAAAGCTCAAGGAGCTAATGAACAAAATGAGGGATGCTGGATATGTGCCTGAAACCAAATATGCACTCTATGATCTGGAGCTTGAGAACAAAGAAGAACTCCTTAGCTATCATAGTGAAAAACTAGCAATTGCTTTCGTTCTCACTCGCAAATCTGAACTGCCAATTAGGATAATGAAGAACCTTCGGGTTTGTGGTGACTGTCACACTGCTTTCAAATACATATCAAAGATTGTTGGTCGACAGATAATTTTACGAGATTCAAATAGATTTCACCATTTTGGTGGTGGCATGTGTTCTTGTGGGGATTATTGGTGA

Protein sequence

>MS.gene056948.t1

MHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNKMRDAGYVPETKYALYDLELENKEELLSYHSEKLAIAFVLTRKSELPIRIMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGDYW