Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27041.t1 | XP_013466165.1 | 97.5 | 550 | 14 | 0 | 1 | 550 | 1 | 550 | 2.10E-261 | 911.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27041.t1 | Q8RXK2 | 47.2 | 472 | 230 | 6 | 1 | 461 | 1 | 464 | 2.8e-110 | 400.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27041.t1 | A0A072VF22 | 97.5 | 550 | 14 | 0 | 1 | 550 | 1 | 550 | 1.5e-261 | 911.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene27041 | 0.831466 | 1.64E-55 | -1.69E-46 |
| MS.gene049441 | MS.gene27041 | 0.807528 | 4.84E-50 | -1.69E-46 |
| MS.gene049824 | MS.gene27041 | 0.847665 | 1.00E-59 | -1.69E-46 |
| MS.gene049825 | MS.gene27041 | 0.844182 | 8.86E-59 | -1.69E-46 |
| MS.gene049873 | MS.gene27041 | 0.821712 | 3.49E-53 | -1.69E-46 |
| MS.gene050303 | MS.gene27041 | 0.803074 | 4.15E-49 | -1.69E-46 |
| MS.gene050885 | MS.gene27041 | 0.801027 | 1.09E-48 | -1.69E-46 |
| MS.gene051247 | MS.gene27041 | 0.818015 | 2.44E-52 | -1.69E-46 |
| MS.gene051700 | MS.gene27041 | 0.841067 | 5.95E-58 | -1.69E-46 |
| MS.gene051744 | MS.gene27041 | 0.849603 | 2.91E-60 | -1.69E-46 |
| MS.gene051790 | MS.gene27041 | 0.802989 | 4.32E-49 | -1.69E-46 |
| MS.gene05188 | MS.gene27041 | 0.846714 | 1.83E-59 | -1.69E-46 |
| MS.gene051975 | MS.gene27041 | 0.834338 | 3.18E-56 | -1.69E-46 |
| MS.gene052582 | MS.gene27041 | 0.847029 | 1.50E-59 | -1.69E-46 |
| MS.gene052584 | MS.gene27041 | 0.854068 | 1.57E-61 | -1.69E-46 |
| MS.gene052717 | MS.gene27041 | 0.811662 | 6.26E-51 | -1.69E-46 |
| MS.gene053058 | MS.gene27041 | 0.81507 | 1.12E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene27041 | 0.801268 | 9.76E-49 | -1.69E-46 |
| MS.gene053122 | MS.gene27041 | 0.828216 | 1.02E-54 | -1.69E-46 |
| MS.gene053226 | MS.gene27041 | 0.875647 | 2.61E-68 | -1.69E-46 |
| MS.gene05365 | MS.gene27041 | 0.801802 | 7.58E-49 | -1.69E-46 |
| MS.gene053963 | MS.gene27041 | 0.80542 | 1.35E-49 | -1.69E-46 |
| MS.gene054222 | MS.gene27041 | 0.806109 | 9.65E-50 | -1.69E-46 |
| MS.gene054576 | MS.gene27041 | 0.835489 | 1.63E-56 | -1.69E-46 |
| MS.gene054651 | MS.gene27041 | 0.817589 | 3.05E-52 | -1.69E-46 |
| MS.gene054775 | MS.gene27041 | 0.800308 | 1.53E-48 | -1.69E-46 |
| MS.gene054967 | MS.gene27041 | 0.809015 | 2.33E-50 | -1.69E-46 |
| MS.gene055166 | MS.gene27041 | 0.808202 | 3.48E-50 | -1.69E-46 |
| MS.gene05517 | MS.gene27041 | 0.800917 | 1.15E-48 | -1.69E-46 |
| MS.gene055313 | MS.gene27041 | 0.807359 | 5.25E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene27041 | 0.836916 | 7.07E-57 | -1.69E-46 |
| MS.gene055586 | MS.gene27041 | 0.808589 | 2.88E-50 | -1.69E-46 |
| MS.gene055589 | MS.gene27041 | 0.810062 | 1.39E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene27041 | 0.833951 | 3.97E-56 | -1.69E-46 |
| MS.gene055778 | MS.gene27041 | 0.830052 | 3.65E-55 | -1.69E-46 |
| MS.gene055808 | MS.gene27041 | 0.831711 | 1.43E-55 | -1.69E-46 |
| MS.gene056091 | MS.gene27041 | 0.839372 | 1.65E-57 | -1.69E-46 |
| MS.gene056215 | MS.gene27041 | 0.80103 | 1.09E-48 | -1.69E-46 |
| MS.gene056403 | MS.gene27041 | 0.895113 | 1.30E-75 | -1.69E-46 |
| MS.gene05659 | MS.gene27041 | 0.814616 | 1.41E-51 | -1.69E-46 |
| MS.gene056605 | MS.gene27041 | 0.886094 | 4.61E-72 | -1.69E-46 |
| MS.gene056638 | MS.gene27041 | 0.822254 | 2.61E-53 | -1.69E-46 |
| MS.gene05686 | MS.gene27041 | 0.807465 | 4.99E-50 | -1.69E-46 |
| MS.gene05689 | MS.gene27041 | 0.868116 | 8.29E-66 | -1.69E-46 |
| MS.gene056948 | MS.gene27041 | 0.808957 | 2.40E-50 | -1.69E-46 |
| MS.gene056986 | MS.gene27041 | 0.83129 | 1.81E-55 | -1.69E-46 |
| MS.gene057102 | MS.gene27041 | 0.818912 | 1.53E-52 | -1.69E-46 |
| MS.gene057360 | MS.gene27041 | 0.814556 | 1.45E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene27041 | 0.822775 | 1.98E-53 | -1.69E-46 |
| MS.gene058037 | MS.gene27041 | 0.80699 | 6.29E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene27041 | 0.816519 | 5.30E-52 | -1.69E-46 |
| MS.gene058668 | MS.gene27041 | 0.830775 | 2.43E-55 | -1.69E-46 |
| MS.gene058908 | MS.gene27041 | 0.806278 | 8.89E-50 | -1.69E-46 |
| MS.gene058911 | MS.gene27041 | 0.805146 | 1.54E-49 | -1.69E-46 |
| MS.gene05953 | MS.gene27041 | 0.819092 | 1.39E-52 | -1.69E-46 |
| MS.gene05954 | MS.gene27041 | 0.827976 | 1.16E-54 | -1.69E-46 |
| MS.gene059625 | MS.gene27041 | 0.814846 | 1.25E-51 | -1.69E-46 |
| MS.gene059725 | MS.gene27041 | 0.826238 | 3.03E-54 | -1.69E-46 |
| MS.gene05985 | MS.gene27041 | -0.818759 | 1.66E-52 | -1.69E-46 |
| MS.gene059901 | MS.gene27041 | -0.804064 | 2.58E-49 | -1.69E-46 |
| MS.gene059935 | MS.gene27041 | 0.839261 | 1.76E-57 | -1.69E-46 |
| MS.gene06011 | MS.gene27041 | 0.806357 | 8.55E-50 | -1.69E-46 |
| MS.gene060365 | MS.gene27041 | 0.840504 | 8.36E-58 | -1.69E-46 |
| MS.gene060429 | MS.gene27041 | 0.829451 | 5.11E-55 | -1.69E-46 |
| MS.gene060521 | MS.gene27041 | 0.801388 | 9.22E-49 | -1.69E-46 |
| MS.gene060763 | MS.gene27041 | 0.81499 | 1.16E-51 | -1.69E-46 |
| MS.gene060830 | MS.gene27041 | 0.832683 | 8.22E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27041.t1 | MTR_1g023955 | 97.818 | 550 | 12 | 0 | 1 | 550 | 1 | 550 | 0.0 | 1106 |
| MS.gene27041.t1 | MTR_1g423960 | 96.000 | 100 | 4 | 0 | 1 | 100 | 1 | 100 | 2.46e-63 | 202 |
| MS.gene27041.t1 | MTR_1g029410 | 45.283 | 159 | 85 | 2 | 142 | 300 | 255 | 411 | 2.63e-32 | 129 |
| MS.gene27041.t1 | MTR_1g029410 | 45.283 | 159 | 85 | 2 | 142 | 300 | 218 | 374 | 9.79e-32 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27041.t1 | AT5G67240 | 50.585 | 427 | 196 | 6 | 1 | 415 | 1 | 424 | 1.54e-142 | 421 |
| MS.gene27041.t1 | AT5G67240 | 50.585 | 427 | 196 | 6 | 1 | 415 | 1 | 424 | 1.90e-141 | 423 |
| MS.gene27041.t1 | AT5G67240 | 32.500 | 160 | 102 | 3 | 316 | 471 | 465 | 622 | 2.32e-16 | 82.8 |
| MS.gene27041.t1 | AT5G67240 | 50.585 | 427 | 196 | 6 | 1 | 415 | 1 | 424 | 7.21e-141 | 421 |
| MS.gene27041.t1 | AT5G67240 | 45.000 | 100 | 54 | 1 | 316 | 415 | 465 | 563 | 6.35e-19 | 90.9 |
| MS.gene27041.t1 | AT5G67240 | 50.585 | 427 | 196 | 6 | 1 | 415 | 1 | 424 | 6.60e-140 | 424 |
| MS.gene27041.t1 | AT5G67240 | 45.000 | 100 | 54 | 1 | 316 | 415 | 465 | 563 | 6.28e-19 | 91.3 |
| MS.gene27041.t1 | AT5G67240 | 32.500 | 160 | 102 | 3 | 316 | 471 | 604 | 761 | 3.90e-16 | 82.4 |
| MS.gene27041.t1 | AT3G50100 | 47.506 | 421 | 203 | 7 | 1 | 415 | 1 | 409 | 7.64e-126 | 375 |
| MS.gene27041.t1 | AT5G05540 | 44.681 | 423 | 221 | 7 | 1 | 415 | 1 | 418 | 2.15e-105 | 324 |
| MS.gene27041.t1 | AT3G50100 | 47.799 | 318 | 155 | 4 | 102 | 415 | 2 | 312 | 3.38e-95 | 293 |
| MS.gene27041.t1 | AT5G05540 | 46.154 | 351 | 177 | 6 | 1 | 344 | 1 | 346 | 2.99e-91 | 284 |
| MS.gene27041.t1 | AT3G50090 | 43.731 | 327 | 156 | 6 | 82 | 400 | 12 | 318 | 1.30e-76 | 245 |
| MS.gene27041.t1 | AT5G25800 | 42.424 | 165 | 93 | 2 | 142 | 306 | 217 | 379 | 3.78e-27 | 115 |
| MS.gene27041.t1 | AT5G25800 | 42.424 | 165 | 93 | 2 | 142 | 306 | 215 | 377 | 3.85e-27 | 115 |
| MS.gene27041.t1 | AT3G15080 | 35.849 | 159 | 87 | 8 | 140 | 292 | 81 | 230 | 8.19e-14 | 72.4 |
| MS.gene27041.t1 | AT5G40310 | 33.140 | 172 | 94 | 7 | 138 | 292 | 131 | 298 | 1.14e-12 | 70.1 |
| MS.gene27041.t1 | AT5G40310 | 33.140 | 172 | 94 | 7 | 138 | 292 | 122 | 289 | 1.35e-12 | 69.7 |
Find 111 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATCTCCTTGACCGTTTC+TGG | 0.065636 | 1.1:+1042284 | None:intergenic |
| ATCTTTGTAACAGTCTGTTT+TGG | 0.204642 | 1.1:-1042846 | MS.gene27041:intron |
| CAGTTTATTTGTTCGGAAAA+TGG | 0.222363 | 1.1:-1041749 | MS.gene27041:CDS |
| GGCTCTTGAACCAATGTTAA+TGG | 0.248346 | 1.1:+1042716 | None:intergenic |
| GAAAGGCATGAAGGGTAAAA+TGG | 0.250069 | 1.1:-1046187 | MS.gene27041:CDS |
| GGGCTATGAAGTTCGGAAAA+AGG | 0.268806 | 1.1:-1042825 | MS.gene27041:CDS |
| GTTGGTTGATATTGTAAAAT+TGG | 0.270086 | 1.1:-1046217 | MS.gene27041:CDS |
| AAAGAGGTCCCATGAGGTTT+TGG | 0.280323 | 1.1:-1046100 | MS.gene27041:CDS |
| AGTGATAAACCTTAAGAAAA+AGG | 0.280502 | 1.1:-1043914 | MS.gene27041:CDS |
| AATTACTGCTCTGCATAAAA+TGG | 0.290293 | 1.1:-1041368 | MS.gene27041:CDS |
| TAAACTGTGTCCAACTAATA+TGG | 0.306541 | 1.1:+1043403 | None:intergenic |
| TGAACCAATGTTAATGGAAA+TGG | 0.321470 | 1.1:+1042722 | None:intergenic |
| ATTGTATATGTACCTTTGTT+TGG | 0.351180 | 1.1:+1042193 | None:intergenic |
| CTTCACTTTCTTTCAATCGT+TGG | 0.364206 | 1.1:+1041437 | None:intergenic |
| TGTGGTAGATCTTATCCCTT+TGG | 0.364944 | 1.1:+1043891 | None:intergenic |
| GAGAGAACAGTTGAGGAAAA+AGG | 0.366768 | 1.1:-1041545 | MS.gene27041:CDS |
| GTACCTTTGTTTGGCTGCCT+TGG | 0.368463 | 1.1:+1042202 | None:intergenic |
| AGTTTATTTGTTCGGAAAAT+GGG | 0.384251 | 1.1:-1041748 | MS.gene27041:CDS |
| GCACTACACGAAATTGTTCC+TGG | 0.385982 | 1.1:-1042526 | MS.gene27041:CDS |
| TAACAAACCTTATCAATAGA+TGG | 0.392009 | 1.1:+1045053 | None:intergenic |
| TTCGTTGCCATCTATTGATA+AGG | 0.396493 | 1.1:-1045060 | MS.gene27041:intron |
| ATTACACAAACTTGTTAAAC+CGG | 0.400307 | 1.1:-1043626 | MS.gene27041:CDS |
| TACTTTGTGTAGGACTCAAA+TGG | 0.401193 | 1.1:-1041820 | MS.gene27041:intron |
| ACCTCATGGGACCTCTTTGA+TGG | 0.405801 | 1.1:+1046105 | None:intergenic |
| TTCGTTGAATAGTTTGTGTC+AGG | 0.407721 | 1.1:-1043156 | MS.gene27041:intron |
| TCCAATGGAACCATATTAGT+TGG | 0.408073 | 1.1:-1043413 | MS.gene27041:CDS |
| TCTGGTAAATCTCTCTTAGA+TGG | 0.409357 | 1.1:+1041700 | None:intergenic |
| TTATGAAAACATACCTGCTC+AGG | 0.413500 | 1.1:+1045840 | None:intergenic |
| TGTTGTAGATCACAATTTAG+AGG | 0.418558 | 1.1:-1043803 | MS.gene27041:intron |
| GACTACAAAACAGAGATTAC+TGG | 0.429986 | 1.1:-1043589 | MS.gene27041:CDS |
| TGAGTGTCAGTTTATTTGTT+CGG | 0.442329 | 1.1:-1041756 | MS.gene27041:CDS |
| TAGGGTGCTGGAGAGTTACT+TGG | 0.466593 | 1.1:+1045099 | None:intergenic |
| TTGCTTCAGCCTTCCAGAAA+CGG | 0.466691 | 1.1:-1042297 | MS.gene27041:intron |
| TGCATACATCTTCCAACCCT+TGG | 0.468589 | 1.1:-1043201 | MS.gene27041:CDS |
| AAAGGCATGAAGGGTAAAAT+GGG | 0.471068 | 1.1:-1046186 | MS.gene27041:CDS |
| TCCAACTAATATGGTTCCAT+TGG | 0.471919 | 1.1:+1043412 | None:intergenic |
| AATGGATCCTGAAGTTGAAA+AGG | 0.473741 | 1.1:-1041638 | MS.gene27041:CDS |
| GGTTGCTGTTGATTGTGAAA+TGG | 0.476220 | 1.1:-1043866 | MS.gene27041:CDS |
| TGAAGATGGGACTGAAGCTT+TGG | 0.477204 | 1.1:-1043836 | MS.gene27041:CDS |
| TAGTCTTTGATTGCTTTCTC+CGG | 0.480451 | 1.1:+1043607 | None:intergenic |
| CTCAACGGATGAGGATTTGA+AGG | 0.485414 | 1.1:-1046058 | MS.gene27041:intron |
| GAATAATCCATTGGATACAT+AGG | 0.485454 | 1.1:+1045080 | None:intergenic |
| AGTGGATCATGAAATTGAAA+AGG | 0.487238 | 1.1:-1041491 | MS.gene27041:CDS |
| TTGCTCCTTAGCTGATATAC+AGG | 0.488234 | 1.1:-1043536 | MS.gene27041:intron |
| GCTTCAGTGTTCACAGTGGT+TGG | 0.489845 | 1.1:+1042547 | None:intergenic |
| GTAAAATTGGTACAAAAGAA+AGG | 0.490743 | 1.1:-1046204 | MS.gene27041:CDS |
| CGATCTATTGTGAAGTCCCC+AGG | 0.493552 | 1.1:+1042508 | None:intergenic |
| TGTCACGTGTCGGCTGAGTA+CGG | 0.498224 | 1.1:-1041782 | MS.gene27041:CDS |
| ACATCAACCATCTCGCCCTC+TGG | 0.503742 | 1.1:+1041682 | None:intergenic |
| GATTGACACCGCGGAAAAGA+AGG | 0.505994 | 1.1:-1047344 | MS.gene27041:intron |
| CACTACACGAAATTGTTCCT+GGG | 0.507092 | 1.1:-1042525 | MS.gene27041:CDS |
| ATCTCACGATTCCCCTGAGC+AGG | 0.509513 | 1.1:-1045853 | MS.gene27041:intron |
| GGGTAAAATGGGAGACTGGA+AGG | 0.511985 | 1.1:-1046175 | MS.gene27041:CDS |
| AGATTTACCAGAGGGCGAGA+TGG | 0.514247 | 1.1:-1041689 | MS.gene27041:CDS |
| TGTTTCAATCTCTTTCAAGT+AGG | 0.515025 | 1.1:+1041612 | None:intergenic |
| ACTTTGTGTAGGACTCAAAT+GGG | 0.515289 | 1.1:-1041819 | MS.gene27041:intron |
| AAAGACATTCTCAACGGATG+AGG | 0.517939 | 1.1:-1046067 | MS.gene27041:CDS |
| GTCACGTGTCGGCTGAGTAC+GGG | 0.526262 | 1.1:-1041781 | MS.gene27041:CDS |
| ATGAAGAAGTTGTTATCCAA+TGG | 0.538388 | 1.1:-1043428 | MS.gene27041:CDS |
| CCTTGGATGGCTCTATTCAC+AGG | 0.539512 | 1.1:-1043184 | MS.gene27041:CDS |
| TGATTCCAAGGAAGGAAAAG+TGG | 0.539897 | 1.1:-1041509 | MS.gene27041:CDS |
| GAAATGGTTCTCTGTGAAGA+TGG | 0.540693 | 1.1:-1043850 | MS.gene27041:CDS |
| CCATTGGATACATAGGGTGC+TGG | 0.541606 | 1.1:+1045087 | None:intergenic |
| GAAATGCAGCCAAAACCTCA+TGG | 0.548328 | 1.1:+1046091 | None:intergenic |
| GGTACAAAAGAAAGGCATGA+AGG | 0.548788 | 1.1:-1046196 | MS.gene27041:CDS |
| GTGCTTCAATCTCTTTCAAG+TGG | 0.549104 | 1.1:+1041464 | None:intergenic |
| TAAGCCATTTCCATTAACAT+TGG | 0.550774 | 1.1:-1042726 | MS.gene27041:CDS |
| AATAATCCATTGGATACATA+GGG | 0.550785 | 1.1:+1045081 | None:intergenic |
| TCTCCTTGACCGTTTCTGGA+AGG | 0.551707 | 1.1:+1042288 | None:intergenic |
| ACGATTGAAAGAGAGTGAGT+TGG | 0.554197 | 1.1:-1041581 | MS.gene27041:CDS |
| CAAGTGGATGATTCCAAGGA+AGG | 0.556893 | 1.1:-1041517 | MS.gene27041:CDS |
| CCAGCACCCTATGTATCCAA+TGG | 0.559697 | 1.1:-1045087 | MS.gene27041:CDS |
| TGAAGGGTAAAATGGGAGAC+TGG | 0.560598 | 1.1:-1046179 | MS.gene27041:CDS |
| TACATCTTCCAACCCTTGGA+TGG | 0.561701 | 1.1:-1043197 | MS.gene27041:CDS |
| TGCTTCAATCTCTTTCAAGT+GGG | 0.564069 | 1.1:+1041465 | None:intergenic |
| GATGGCAACGAATAATCCAT+TGG | 0.567685 | 1.1:+1045071 | None:intergenic |
| CTTACAAGTGGATGATTCCA+AGG | 0.573419 | 1.1:-1041521 | MS.gene27041:CDS |
| GAATAGAGCCATCCAAGGGT+TGG | 0.573837 | 1.1:+1043189 | None:intergenic |
| AATCATTGAGAGAACAGTTG+AGG | 0.578459 | 1.1:-1041552 | MS.gene27041:CDS |
| ATGCATCATGTGCCTCTCGT+TGG | 0.582171 | 1.1:+1042235 | None:intergenic |
| GTACAAAAGAAAGGCATGAA+GGG | 0.582899 | 1.1:-1046195 | MS.gene27041:CDS |
| AATTACCTGTATATCAGCTA+AGG | 0.584653 | 1.1:+1043531 | None:intergenic |
| TATGAAAACATACCTGCTCA+GGG | 0.585900 | 1.1:+1045841 | None:intergenic |
| AAATGGTTCTCTGTGAAGAT+GGG | 0.588526 | 1.1:-1043849 | MS.gene27041:CDS |
| AAATGCAGCCAAAACCTCAT+GGG | 0.595175 | 1.1:+1046092 | None:intergenic |
| TTAGGTTTCAGAAAGTGAGA+TGG | 0.598092 | 1.1:-1042593 | MS.gene27041:intron |
| TCTAAGAGAGATTTACCAGA+GGG | 0.607288 | 1.1:-1041697 | MS.gene27041:CDS |
| CAGCCTTCCAGAAACGGTCA+AGG | 0.607612 | 1.1:-1042291 | MS.gene27041:CDS |
| TGTCCAAGGCAGCCAAACAA+AGG | 0.611407 | 1.1:-1042205 | MS.gene27041:intron |
| GATGCATATGAAAATGTCCA+AGG | 0.619700 | 1.1:-1042219 | MS.gene27041:CDS |
| GGACTTCACAATAGATCGAA+AGG | 0.623377 | 1.1:-1042503 | MS.gene27041:intron |
| CCTGTGAATAGAGCCATCCA+AGG | 0.624216 | 1.1:+1043184 | None:intergenic |
| ACGATTGAAAGAAAGTGAAG+CGG | 0.626577 | 1.1:-1041434 | MS.gene27041:CDS |
| GTTCTTGCAAAGATCAAACA+TGG | 0.630093 | 1.1:-1042755 | MS.gene27041:CDS |
| ATTTCTAAAGACATTCTCAA+CGG | 0.633013 | 1.1:-1046073 | MS.gene27041:CDS |
| TGCAGAAACTTGTCACGTGT+CGG | 0.633987 | 1.1:-1041792 | MS.gene27041:CDS |
| AGCGGAGATTGAATCATCGA+GGG | 0.645556 | 1.1:-1041416 | MS.gene27041:CDS |
| GAAGCTTGATTATGTTAGAG+TGG | 0.657464 | 1.1:-1043231 | MS.gene27041:CDS |
| CTGTGAATAGAGCCATCCAA+GGG | 0.666796 | 1.1:+1043185 | None:intergenic |
| ACAATCAACAGCAACCATTG+TGG | 0.670727 | 1.1:+1043873 | None:intergenic |
| ACTACACGAAATTGTTCCTG+GGG | 0.691492 | 1.1:-1042524 | MS.gene27041:CDS |
| AAGCGGAGATTGAATCATCG+AGG | 0.696061 | 1.1:-1041417 | MS.gene27041:CDS |
| TGACACAAACTATTCAACGA+AGG | 0.706014 | 1.1:+1043158 | None:intergenic |
| AGGGATAAGATCTACCACAA+TGG | 0.714725 | 1.1:-1043887 | MS.gene27041:CDS |
| ATCTAAGAGAGATTTACCAG+AGG | 0.714858 | 1.1:-1041698 | MS.gene27041:CDS |
| TCCATCAAAGAGGTCCCATG+AGG | 0.716207 | 1.1:-1046106 | MS.gene27041:CDS |
| ATGAAAACATACCTGCTCAG+GGG | 0.723649 | 1.1:+1045842 | None:intergenic |
| GGATGAGAAGATTGACACCG+CGG | 0.723985 | 1.1:-1047353 | MS.gene27041:CDS |
| GTATGAGCGATCCATCAAAG+AGG | 0.733411 | 1.1:-1046116 | MS.gene27041:CDS |
| TAGTGCTTCAGTGTTCACAG+TGG | 0.786374 | 1.1:+1042543 | None:intergenic |
| AGTTTATATAATGATCTACG+TGG | 0.789260 | 1.1:-1043386 | MS.gene27041:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTATTAAATTTTATAA+TGG | - | chr1.1:1043150-1043169 | MS.gene27041:intron | 0.0% |
| !! | AAAAAAAAAATCTATAGATA+TGG | + | chr1.1:1044253-1044272 | None:intergenic | 10.0% |
| !! | AATAATAAATTGTATATCTT+TGG | + | chr1.1:1044427-1044446 | None:intergenic | 10.0% |
| !! | ATTTCTATATAAATGTTTAT+AGG | - | chr1.1:1046635-1046654 | MS.gene27041:intron | 10.0% |
| !! | ATTTGTAAAAATTATAACAA+TGG | + | chr1.1:1043238-1043257 | None:intergenic | 10.0% |
| !! | TTATATAGAAATAGAAAATA+TGG | + | chr1.1:1046627-1046646 | None:intergenic | 10.0% |
| !! | TTTCTATATAAATGTTTATA+GGG | - | chr1.1:1046636-1046655 | MS.gene27041:intron | 10.0% |
| !! | AAATTCCTGAAAAAAAAATA+AGG | + | chr1.1:1044204-1044223 | None:intergenic | 15.0% |
| !! | AACAATAAATATTAGGAAAA+TGG | - | chr1.1:1044377-1044396 | MS.gene27041:intron | 15.0% |
| !! | AACAGTAATGATAAAAAATA+TGG | - | chr1.1:1042541-1042560 | MS.gene27041:CDS | 15.0% |
| !! | AATTCCTGAAAAAAAAATAA+GGG | + | chr1.1:1044203-1044222 | None:intergenic | 15.0% |
| !! | ACAATAAATATTAGGAAAAT+GGG | - | chr1.1:1044378-1044397 | MS.gene27041:intron | 15.0% |
| !! | ACAGTAATGATAAAAAATAT+GGG | - | chr1.1:1042542-1042561 | MS.gene27041:CDS | 15.0% |
| !! | TAAAAAAGCTAAAAAAAACA+TGG | - | chr1.1:1043909-1043928 | MS.gene27041:CDS | 15.0% |
| !! | TAGAAATACTTATCAATTAT+TGG | + | chr1.1:1042989-1043008 | None:intergenic | 15.0% |
| !! | TGCAATTAACAATAAATATT+AGG | - | chr1.1:1044370-1044389 | MS.gene27041:intron | 15.0% |
| !! | TTAGTTAATTTATTTAGTGA+TGG | - | chr1.1:1044639-1044658 | MS.gene27041:intron | 15.0% |
| !!! | ATTTTAAAGATAATGCATAA+AGG | + | chr1.1:1043207-1043226 | None:intergenic | 15.0% |
| !!! | ATTTTCTTTAATAAAGCTTA+TGG | - | chr1.1:1043936-1043955 | MS.gene27041:intron | 15.0% |
| !!! | TGTTTATTTTATTCTCATAT+TGG | + | chr1.1:1041478-1041497 | None:intergenic | 15.0% |
| !! | AAAATTATAACAATGGAACT+AGG | + | chr1.1:1043231-1043250 | None:intergenic | 20.0% |
| !! | AAAGCAAATCATATAGTAAA+AGG | + | chr1.1:1044621-1044640 | None:intergenic | 20.0% |
| !! | AAATAGTCATAAATATGTCA+AGG | - | chr1.1:1043765-1043784 | MS.gene27041:intron | 20.0% |
| !! | AAATATTGATAGATATGGAA+TGG | - | chr1.1:1044470-1044489 | MS.gene27041:intron | 20.0% |
| !! | AAATTATAACAATGGAACTA+GGG | + | chr1.1:1043230-1043249 | None:intergenic | 20.0% |
| !! | AATCTAATCAAGCAATAAAA+TGG | + | chr1.1:1041439-1041458 | None:intergenic | 20.0% |
| !! | ATCTAATCAAGCAATAAAAT+GGG | + | chr1.1:1041438-1041457 | None:intergenic | 20.0% |
| !! | CATATCTATCAATATTTAAG+AGG | + | chr1.1:1044467-1044486 | None:intergenic | 20.0% |
| !! | CATTTCAAAAACAAAACAAA+AGG | + | chr1.1:1041684-1041703 | None:intergenic | 20.0% |
| !! | CTCTTAAATATTGATAGATA+TGG | - | chr1.1:1044465-1044484 | MS.gene27041:intron | 20.0% |
| !! | GGTATAATAAATGTCAATAA+AGG | - | chr1.1:1042273-1042292 | MS.gene27041:CDS | 20.0% |
| !! | TCAATTTATGATAAGAAACT+TGG | + | chr1.1:1046760-1046779 | None:intergenic | 20.0% |
| !! | TCATGTTATTCCAATAATTA+CGG | + | chr1.1:1046263-1046282 | None:intergenic | 20.0% |
| !! | TGAGAATAAAATAAACATAG+CGG | - | chr1.1:1041481-1041500 | MS.gene27041:CDS | 20.0% |
| !! | TGTAAATTATTAGTCATACA+AGG | - | chr1.1:1044691-1044710 | MS.gene27041:intron | 20.0% |
| !! | TTTCATAATGATTGTTATGT+TGG | - | chr1.1:1042860-1042879 | MS.gene27041:intron | 20.0% |
| !!! | AAAAGACCATGTTTTTTTTA+AGG | + | chr1.1:1043859-1043878 | None:intergenic | 20.0% |
| !!! | ACATTAAAGTATTAGTTTCT+GGG | + | chr1.1:1042440-1042459 | None:intergenic | 20.0% |
| !!! | ATTAACTTTATCTTTAGGAA+AGG | + | chr1.1:1042708-1042727 | None:intergenic | 20.0% |
| !!! | ATTGAAATTACTTTTTCGTA+CGG | - | chr1.1:1044019-1044038 | MS.gene27041:intron | 20.0% |
| !!! | ATTTCAAGATTTTCTACTAT+GGG | + | chr1.1:1041577-1041596 | None:intergenic | 20.0% |
| !!! | ATTTTGGATAATCATATATC+AGG | - | chr1.1:1042239-1042258 | MS.gene27041:CDS | 20.0% |
| !!! | ATTTTTTATCATTACTGTTC+AGG | + | chr1.1:1042540-1042559 | None:intergenic | 20.0% |
| !!! | TGCATTCATTTGAATATTTT+AGG | - | chr1.1:1041853-1041872 | MS.gene27041:intron | 20.0% |
| !!! | TTTTGGATAATCATATATCA+GGG | - | chr1.1:1042240-1042259 | MS.gene27041:CDS | 20.0% |
| !!! | TTTTTTTTTGAAGGATAACA+TGG | - | chr1.1:1043877-1043896 | MS.gene27041:CDS | 20.0% |
| ! | AACTAATAATGAAAAAGTGG+CGG | + | chr1.1:1043176-1043195 | None:intergenic | 25.0% |
| ! | AATAATCCATTGGATACATA+GGG | + | chr1.1:1043607-1043626 | None:intergenic | 25.0% |
| ! | AATGATAAAAAATATGGGTC+AGG | - | chr1.1:1042547-1042566 | MS.gene27041:CDS | 25.0% |
| ! | AATTGCATTATAGATTGCTA+AGG | + | chr1.1:1044357-1044376 | None:intergenic | 25.0% |
| ! | ACTAATACTTTAATGTGCAT+AGG | - | chr1.1:1042444-1042463 | MS.gene27041:intron | 25.0% |
| ! | AGAATAAAATAAACATAGCG+GGG | - | chr1.1:1041483-1041502 | MS.gene27041:CDS | 25.0% |
| ! | AGTGATAAACCTTAAGAAAA+AGG | - | chr1.1:1044771-1044790 | MS.gene27041:intron | 25.0% |
| ! | AGTTTATATAATGATCTACG+TGG | - | chr1.1:1045299-1045318 | MS.gene27041:intron | 25.0% |
| ! | AGTTTATTTGTTCGGAAAAT+GGG | - | chr1.1:1046937-1046956 | MS.gene27041:intron | 25.0% |
| ! | ATATATCAGGGAAAAAACTA+GGG | - | chr1.1:1042252-1042271 | MS.gene27041:CDS | 25.0% |
| ! | ATTGTATATGTACCTTTGTT+TGG | + | chr1.1:1046495-1046514 | None:intergenic | 25.0% |
| ! | ATTTGCTTCTTTGTTCTATT+CGG | - | chr1.1:1041400-1041419 | MS.gene27041:CDS | 25.0% |
| ! | CAGAAAGTAATATTAGAAGA+TGG | + | chr1.1:1043401-1043420 | None:intergenic | 25.0% |
| ! | CTCGTAAAATATAGAAAAGA+TGG | + | chr1.1:1042912-1042931 | None:intergenic | 25.0% |
| ! | CTGGTAAAATATAGAAAAGA+TGG | + | chr1.1:1042958-1042977 | None:intergenic | 25.0% |
| ! | GAAAATAACACAGAAAAAAG+TGG | - | chr1.1:1043832-1043851 | MS.gene27041:CDS | 25.0% |
| ! | GAAATAGAAAATATGGATTC+AGG | + | chr1.1:1046620-1046639 | None:intergenic | 25.0% |
| ! | GAGAATAAAATAAACATAGC+GGG | - | chr1.1:1041482-1041501 | MS.gene27041:CDS | 25.0% |
| ! | GAGGTAATGTAATTTAATGA+TGG | - | chr1.1:1044901-1044920 | MS.gene27041:intron | 25.0% |
| ! | GTAAAATTGGTACAAAAGAA+AGG | - | chr1.1:1042481-1042500 | MS.gene27041:intron | 25.0% |
| ! | TAAAAAATGTTGAACCCTTA+AGG | + | chr1.1:1043137-1043156 | None:intergenic | 25.0% |
| ! | TAACAAACCTTATCAATAGA+TGG | + | chr1.1:1043635-1043654 | None:intergenic | 25.0% |
| ! | TAGGTTCAACATTCAAATTT+GGG | + | chr1.1:1043319-1043338 | None:intergenic | 25.0% |
| ! | TATACAATACAATGACTTAC+AGG | + | chr1.1:1045993-1046012 | None:intergenic | 25.0% |
| ! | TATTGCTTGATTAGATTGTT+GGG | - | chr1.1:1041442-1041461 | MS.gene27041:CDS | 25.0% |
| ! | TCAATTATTGGTACTATAAC+TGG | + | chr1.1:1042977-1042996 | None:intergenic | 25.0% |
| ! | TGATAGATAAACAACTGAAA+CGG | - | chr1.1:1041755-1041774 | MS.gene27041:CDS | 25.0% |
| ! | TGGAACTAATAATGAAAAAG+TGG | + | chr1.1:1043179-1043198 | None:intergenic | 25.0% |
| ! | TTAGGTTCAACATTCAAATT+TGG | + | chr1.1:1043320-1043339 | None:intergenic | 25.0% |
| ! | TTAGTAAACAAAATGAAACC+AGG | + | chr1.1:1045414-1045433 | None:intergenic | 25.0% |
| ! | TTATTGCTTGATTAGATTGT+TGG | - | chr1.1:1041441-1041460 | MS.gene27041:CDS | 25.0% |
| ! | TTGTAGTTATACAGTTAAAC+TGG | - | chr1.1:1046030-1046049 | MS.gene27041:intron | 25.0% |
| ! | TTTAGGAAAGGATATAAATC+AGG | + | chr1.1:1042696-1042715 | None:intergenic | 25.0% |
| !! | AAACGAAACAATTTCTTTTC+GGG | - | chr1.1:1045001-1045020 | MS.gene27041:intron | 25.0% |
| !! | ATCATATAGTAAAAGGTGTA+AGG | + | chr1.1:1044614-1044633 | None:intergenic | 25.0% |
| !! | ATTTAAAACCTTGAAAACAG+TGG | - | chr1.1:1042147-1042166 | MS.gene27041:intron | 25.0% |
| !! | ATTTCTAAAGACATTCTCAA+CGG | - | chr1.1:1042612-1042631 | MS.gene27041:intron | 25.0% |
| !! | ATTTTTACTTTCTTGTTCTC+GGG | + | chr1.1:1047030-1047049 | None:intergenic | 25.0% |
| !! | CAAACGAAACAATTTCTTTT+CGG | - | chr1.1:1045000-1045019 | MS.gene27041:intron | 25.0% |
| !! | CACATTAAAGTATTAGTTTC+TGG | + | chr1.1:1042441-1042460 | None:intergenic | 25.0% |
| !! | CATTAAAGTATTAGTTTCTG+GGG | + | chr1.1:1042439-1042458 | None:intergenic | 25.0% |
| !! | CATTTCAAGATTTTCTACTA+TGG | + | chr1.1:1041578-1041597 | None:intergenic | 25.0% |
| !! | CATTTTTACTTTCTTGTTCT+CGG | + | chr1.1:1047031-1047050 | None:intergenic | 25.0% |
| !! | GTTGGTTGATATTGTAAAAT+TGG | - | chr1.1:1042468-1042487 | MS.gene27041:intron | 25.0% |
| !! | TAGGAAGCGTAAAAAATAAT+TGG | + | chr1.1:1043427-1043446 | None:intergenic | 25.0% |
| !! | TCAAGATTCAAAGTGTATTT+TGG | - | chr1.1:1042223-1042242 | MS.gene27041:CDS | 25.0% |
| !! | TTGAACTTTTGACATTGTAA+GGG | - | chr1.1:1041722-1041741 | MS.gene27041:CDS | 25.0% |
| !! | TTGGTTCTTAAAAATAGCTA+AGG | + | chr1.1:1046434-1046453 | None:intergenic | 25.0% |
| !! | TTTAACTTTATATCTAGGGA+AGG | + | chr1.1:1042667-1042686 | None:intergenic | 25.0% |
| !! | TTTGAACTTTTGACATTGTA+AGG | - | chr1.1:1041721-1041740 | MS.gene27041:CDS | 25.0% |
| !!! | ATTACACAAACTTGTTAAAC+CGG | - | chr1.1:1045059-1045078 | MS.gene27041:intron | 25.0% |
| !!! | CAAACCCTTATTTTTTTTTC+AGG | - | chr1.1:1044196-1044215 | MS.gene27041:intron | 25.0% |
| !!! | CATGGTCTTTTTTTTTTTGA+AGG | - | chr1.1:1043868-1043887 | MS.gene27041:CDS | 25.0% |
| !!! | GGACTTTAAAATTTATCCTT+CGG | - | chr1.1:1046298-1046317 | MS.gene27041:intron | 25.0% |
| !!! | GGCTTTTAACTTTATATCTA+GGG | + | chr1.1:1042671-1042690 | None:intergenic | 25.0% |
| !!! | GTTATATTCTATTTTTCTCG+AGG | + | chr1.1:1043801-1043820 | None:intergenic | 25.0% |
| !!! | GTTATTTTTCCATCAGATTT+TGG | + | chr1.1:1046692-1046711 | None:intergenic | 25.0% |
| !!! | GTTTTCTGTGTATTTTTTTG+AGG | - | chr1.1:1043045-1043064 | MS.gene27041:intron | 25.0% |
| !!! | TTGTATACTTTTTTCAGTAC+CGG | - | chr1.1:1046006-1046025 | MS.gene27041:intron | 25.0% |
| AACAAATGTAGCCACAATTA+CGG | + | chr1.1:1042070-1042089 | None:intergenic | 30.0% | |
| AACCAGGAAAAATAACACAA+CGG | + | chr1.1:1045398-1045417 | None:intergenic | 30.0% | |
| AAGAAGCAAATGCAAAACAA+AGG | + | chr1.1:1041391-1041410 | None:intergenic | 30.0% | |
| AATCATAATATTCGCATTGC+GGG | + | chr1.1:1045573-1045592 | None:intergenic | 30.0% | |
| AATTACCTGTATATCAGCTA+AGG | + | chr1.1:1045157-1045176 | None:intergenic | 30.0% | |
| AATTACTGCTCTGCATAAAA+TGG | - | chr1.1:1047317-1047336 | MS.gene27041:intron | 30.0% | |
| ACAAACTCACAAGCAAATTA+CGG | - | chr1.1:1045761-1045780 | MS.gene27041:intron | 30.0% | |
| ACATGAATGTCTTCAATTTG+AGG | - | chr1.1:1046277-1046296 | MS.gene27041:intron | 30.0% | |
| AGCATTTGAAAGGAAGATAA+AGG | + | chr1.1:1045202-1045221 | None:intergenic | 30.0% | |
| AGTGGACCTTAAAAAAAACA+TGG | - | chr1.1:1043850-1043869 | MS.gene27041:CDS | 30.0% | |
| AGTGGATCATGAAATTGAAA+AGG | - | chr1.1:1047194-1047213 | MS.gene27041:intron | 30.0% | |
| AGTTATACAGTTAAACTGGT+TGG | - | chr1.1:1046034-1046053 | MS.gene27041:intron | 30.0% | |
| ATGAAGAAGTTGTTATCCAA+TGG | - | chr1.1:1045257-1045276 | MS.gene27041:intron | 30.0% | |
| ATTGATAGATATGGAATGGT+AGG | - | chr1.1:1044474-1044493 | MS.gene27041:intron | 30.0% | |
| ATTGTCCTTGATTTCTCAAT+TGG | - | chr1.1:1044561-1044580 | MS.gene27041:intron | 30.0% | |
| CAGTTTATTTGTTCGGAAAA+TGG | - | chr1.1:1046936-1046955 | MS.gene27041:intron | 30.0% | |
| CATATATCAGGGAAAAAACT+AGG | - | chr1.1:1042251-1042270 | MS.gene27041:CDS | 30.0% | |
| CGAGAACAAGAAAGTAAAAA+TGG | - | chr1.1:1047029-1047048 | MS.gene27041:intron | 30.0% | |
| CTCAATATTTGAGTCAAAAC+TGG | + | chr1.1:1043019-1043038 | None:intergenic | 30.0% | |
| CTTATGCCTGTTCAAAAAAA+CGG | - | chr1.1:1046717-1046736 | MS.gene27041:intron | 30.0% | |
| CTTGTGAGTTTGTATTTGTA+TGG | + | chr1.1:1045754-1045773 | None:intergenic | 30.0% | |
| GAAAAACAAAAGGCTAACAA+AGG | + | chr1.1:1042396-1042415 | None:intergenic | 30.0% | |
| GAATAATCCATTGGATACAT+AGG | + | chr1.1:1043608-1043627 | None:intergenic | 30.0% | |
| GAATCATAATATTCGCATTG+CGG | + | chr1.1:1045574-1045593 | None:intergenic | 30.0% | |
| GAGGTAAGATAAATGAAAGA+TGG | - | chr1.1:1045783-1045802 | MS.gene27041:intron | 30.0% | |
| GGAAAATGGGAAATTAAATG+AGG | - | chr1.1:1044391-1044410 | MS.gene27041:intron | 30.0% | |
| GTGTGTCTATAAATTCAACA+AGG | + | chr1.1:1043718-1043737 | None:intergenic | 30.0% | |
| TAAACTGTGTCCAACTAATA+TGG | + | chr1.1:1045285-1045304 | None:intergenic | 30.0% | |
| TAAATTTCATCCACAGACAA+TGG | + | chr1.1:1044175-1044194 | None:intergenic | 30.0% | |
| TAAGCCATTTCCATTAACAT+TGG | - | chr1.1:1045959-1045978 | MS.gene27041:intron | 30.0% | |
| TACGGTTAGAAAAACATAGT+AGG | + | chr1.1:1043542-1043561 | None:intergenic | 30.0% | |
| TATGTGCACTGCAATAAAAA+AGG | + | chr1.1:1044139-1044158 | None:intergenic | 30.0% | |
| TCCTTCATTAAGCATTTGAA+AGG | + | chr1.1:1045212-1045231 | None:intergenic | 30.0% | |
| TCCTTTCAAATGCTTAATGA+AGG | - | chr1.1:1045208-1045227 | MS.gene27041:intron | 30.0% | |
| TCTATAAATTCAACAAGGAC+TGG | + | chr1.1:1043713-1043732 | None:intergenic | 30.0% | |
| TCTATAGATATGGAATACAG+TGG | + | chr1.1:1044243-1044262 | None:intergenic | 30.0% | |
| TGAACCAATGTTAATGGAAA+TGG | + | chr1.1:1045966-1045985 | None:intergenic | 30.0% | |
| TGAGTGTCAGTTTATTTGTT+CGG | - | chr1.1:1046929-1046948 | MS.gene27041:intron | 30.0% | |
| TGCTACAGTTTATAAGCATT+CGG | - | chr1.1:1044664-1044683 | MS.gene27041:intron | 30.0% | |
| TGGTAGCTAACATACAAAAA+AGG | - | chr1.1:1047337-1047356 | MS.gene27041:intron | 30.0% | |
| TGTTGTAGATCACAATTTAG+AGG | - | chr1.1:1044882-1044901 | MS.gene27041:intron | 30.0% | |
| TTAACTGTATAACTACAACC+CGG | + | chr1.1:1046028-1046047 | None:intergenic | 30.0% | |
| TTCAGTGCTTGAAAATGAAA+TGG | - | chr1.1:1043987-1044006 | MS.gene27041:intron | 30.0% | |
| ! | AAATATGGATTCAGGTATTG+TGG | + | chr1.1:1046612-1046631 | None:intergenic | 30.0% |
| ! | AACGAAACAATTTCTTTTCG+GGG | - | chr1.1:1045002-1045021 | MS.gene27041:intron | 30.0% |
| ! | AAGCATAGTTAATCCCTTTT+GGG | - | chr1.1:1046801-1046820 | MS.gene27041:intron | 30.0% |
| ! | AGATGATTTCAGAACTTTTC+AGG | - | chr1.1:1045032-1045051 | MS.gene27041:intron | 30.0% |
| ! | ATCTTTGTAACAGTCTGTTT+TGG | - | chr1.1:1045839-1045858 | MS.gene27041:intron | 30.0% |
| ! | CTTGTAAGTCAGCTTTTATA+TGG | + | chr1.1:1043274-1043293 | None:intergenic | 30.0% |
| ! | GATAATGCATAAAGGTACAA+TGG | + | chr1.1:1043199-1043218 | None:intergenic | 30.0% |
| ! | GTTTTTCTAACCGTAACTTT+TGG | - | chr1.1:1043547-1043566 | MS.gene27041:CDS | 30.0% |
| ! | TCTTTGTAACAGTCTGTTTT+GGG | - | chr1.1:1045840-1045859 | MS.gene27041:intron | 30.0% |
| ! | TGAACTTTTGACATTGTAAG+GGG | - | chr1.1:1041723-1041742 | MS.gene27041:CDS | 30.0% |
| ! | TGTTTCAATCTCTTTCAAGT+AGG | + | chr1.1:1047076-1047095 | None:intergenic | 30.0% |
| ! | TTACCATTTTGAATGCACAT+AGG | + | chr1.1:1043690-1043709 | None:intergenic | 30.0% |
| ! | TTTTTCCATCAGATTTTGGA+AGG | + | chr1.1:1046688-1046707 | None:intergenic | 30.0% |
| !! | AACACTGGTTTGATCAAAAA+AGG | + | chr1.1:1046839-1046858 | None:intergenic | 30.0% |
| !! | ACACTGGTTTGATCAAAAAA+GGG | + | chr1.1:1046838-1046857 | None:intergenic | 30.0% |
| !! | TATTTTTAAGAACCAACGAG+AGG | - | chr1.1:1046438-1046457 | MS.gene27041:intron | 30.0% |
| !! | TTGGGTTCAAGTTTTGTAAA+TGG | - | chr1.1:1041973-1041992 | MS.gene27041:intron | 30.0% |
| !! | TTTTTGCTGTGGAAAATGAA+GGG | - | chr1.1:1044742-1044761 | MS.gene27041:intron | 30.0% |
| !!! | GGGCTTTTAACTTTATATCT+AGG | + | chr1.1:1042672-1042691 | None:intergenic | 30.0% |
| !!! | GTATATCCGTTTTTTTGAAC+AGG | + | chr1.1:1046726-1046745 | None:intergenic | 30.0% |
| !!! | TCTTAGATGGCATTTTTTTG+TGG | + | chr1.1:1046975-1046994 | None:intergenic | 30.0% |
| !!! | TGTATACTTTTTTCAGTACC+GGG | - | chr1.1:1046007-1046026 | MS.gene27041:intron | 30.0% |
| !!! | TTGTTAGCCTTTTGTTTTTC+CGG | - | chr1.1:1042396-1042415 | MS.gene27041:intron | 30.0% |
| !!! | TTTATGTCACTTTTTTGCTG+TGG | - | chr1.1:1044731-1044750 | MS.gene27041:intron | 30.0% |
| !!! | TTTTTTGCTGTGGAAAATGA+AGG | - | chr1.1:1044741-1044760 | MS.gene27041:intron | 30.0% |
| AAATGGTTCTCTGTGAAGAT+GGG | - | chr1.1:1044836-1044855 | MS.gene27041:intron | 35.0% | |
| AAATGTTGAACCCTTAAGGA+TGG | + | chr1.1:1043133-1043152 | None:intergenic | 35.0% | |
| AACCCAATACCTTGTTCAAA+GGG | + | chr1.1:1041960-1041979 | None:intergenic | 35.0% | |
| AACCTTAAGAAAAAGGCCAA+AGG | - | chr1.1:1044778-1044797 | MS.gene27041:intron | 35.0% | |
| AACTAGACCGGAAAAACAAA+AGG | + | chr1.1:1042406-1042425 | None:intergenic | 35.0% | |
| AATCATTGAGAGAACAGTTG+AGG | - | chr1.1:1047133-1047152 | MS.gene27041:intron | 35.0% | |
| AATGGATCCTGAAGTTGAAA+AGG | - | chr1.1:1047047-1047066 | MS.gene27041:intron | 35.0% | |
| ACCTTAAGAAAAAGGCCAAA+GGG | - | chr1.1:1044779-1044798 | MS.gene27041:intron | 35.0% | |
| ACGATTGAAAGAAAGTGAAG+CGG | - | chr1.1:1047251-1047270 | MS.gene27041:intron | 35.0% | |
| ACTTTAATGTGCATAGGTGT+TGG | - | chr1.1:1042450-1042469 | MS.gene27041:intron | 35.0% | |
| ACTTTGTGTAGGACTCAAAT+GGG | - | chr1.1:1046866-1046885 | MS.gene27041:intron | 35.0% | |
| AGAGGTTCATCCGTAATTAT+TGG | - | chr1.1:1046250-1046269 | MS.gene27041:intron | 35.0% | |
| AGGAAAGGATATAAATCAGG+AGG | + | chr1.1:1042693-1042712 | None:intergenic | 35.0% | |
| ATCTAAGAGAGATTTACCAG+AGG | - | chr1.1:1046987-1047006 | MS.gene27041:intron | 35.0% | |
| ATGAATGCATAACAGTACCA+TGG | + | chr1.1:1041842-1041861 | None:intergenic | 35.0% | |
| ATTCTCCTTCCAAAATCTGA+TGG | - | chr1.1:1046680-1046699 | MS.gene27041:intron | 35.0% | |
| CAAAACAAAGGAGATACTGT+AGG | + | chr1.1:1041379-1041398 | None:intergenic | 35.0% | |
| CAAGTCAAGAAGTTCACATT+AGG | + | chr1.1:1043743-1043762 | None:intergenic | 35.0% | |
| CATGACCAATTGAGAAATCA+AGG | + | chr1.1:1044569-1044588 | None:intergenic | 35.0% | |
| CTTCACTTTCTTTCAATCGT+TGG | + | chr1.1:1047251-1047270 | None:intergenic | 35.0% | |
| GAAAATGAGTAAGACTGATC+TGG | + | chr1.1:1042737-1042756 | None:intergenic | 35.0% | |
| GAAGCTTGATTATGTTAGAG+TGG | - | chr1.1:1045454-1045473 | MS.gene27041:intron | 35.0% | |
| GACTACAAAACAGAGATTAC+TGG | - | chr1.1:1045096-1045115 | MS.gene27041:CDS | 35.0% | |
| GATAAACAACTGAAACGGAA+AGG | - | chr1.1:1041760-1041779 | MS.gene27041:CDS | 35.0% | |
| GATGCATATGAAAATGTCCA+AGG | - | chr1.1:1046466-1046485 | MS.gene27041:intron | 35.0% | |
| GCTACAGTTTATAAGCATTC+GGG | - | chr1.1:1044665-1044684 | MS.gene27041:intron | 35.0% | |
| GGAAAGGATATAAATCAGGA+GGG | + | chr1.1:1042692-1042711 | None:intergenic | 35.0% | |
| GGGCGATTAACTTTATCTTT+AGG | + | chr1.1:1042713-1042732 | None:intergenic | 35.0% | |
| GTTCTTGCAAAGATCAAACA+TGG | - | chr1.1:1045930-1045949 | MS.gene27041:intron | 35.0% | |
| TACTTTGTGTAGGACTCAAA+TGG | - | chr1.1:1046865-1046884 | MS.gene27041:intron | 35.0% | |
| TAGTCTTTGATTGCTTTCTC+CGG | + | chr1.1:1045081-1045100 | None:intergenic | 35.0% | |
| TATGAAAACATACCTGCTCA+GGG | + | chr1.1:1042847-1042866 | None:intergenic | 35.0% | |
| TATTCAATCTGTGACACTCA+TGG | + | chr1.1:1041649-1041668 | None:intergenic | 35.0% | |
| TCATATGGTTATTCCTTTGG+AGG | - | chr1.1:1045640-1045659 | MS.gene27041:intron | 35.0% | |
| TCCAACTAATATGGTTCCAT+TGG | + | chr1.1:1045276-1045295 | None:intergenic | 35.0% | |
| TCCAATGGAACCATATTAGT+TGG | - | chr1.1:1045272-1045291 | MS.gene27041:intron | 35.0% | |
| TCTAAGAGAGATTTACCAGA+GGG | - | chr1.1:1046988-1047007 | MS.gene27041:intron | 35.0% | |
| TCTACAACGAAATTAGCAGT+AGG | + | chr1.1:1045364-1045383 | None:intergenic | 35.0% | |
| TCTGGTAAATCTCTCTTAGA+TGG | + | chr1.1:1046988-1047007 | None:intergenic | 35.0% | |
| TCTTACTTCACCATCCTTAA+GGG | - | chr1.1:1043120-1043139 | MS.gene27041:intron | 35.0% | |
| TGACACAAACTATTCAACGA+AGG | + | chr1.1:1045530-1045549 | None:intergenic | 35.0% | |
| TGGTCATATGGTTATTCCTT+TGG | - | chr1.1:1045637-1045656 | MS.gene27041:intron | 35.0% | |
| TGTTGTGCATTACTTTGTGT+AGG | - | chr1.1:1046855-1046874 | MS.gene27041:intron | 35.0% | |
| TTAAATTCTGATTGAAGCCG+CGG | + | chr1.1:1042133-1042152 | None:intergenic | 35.0% | |
| TTAGGTTTCAGAAAGTGAGA+TGG | - | chr1.1:1046092-1046111 | MS.gene27041:CDS | 35.0% | |
| TTATGAAAACATACCTGCTC+AGG | + | chr1.1:1042848-1042867 | None:intergenic | 35.0% | |
| TTCGTTGCCATCTATTGATA+AGG | - | chr1.1:1043625-1043644 | MS.gene27041:CDS | 35.0% | |
| TTCTTACTTCACCATCCTTA+AGG | - | chr1.1:1043119-1043138 | MS.gene27041:intron | 35.0% | |
| TTTCATTCATCTAAACCAGC+AGG | + | chr1.1:1042366-1042385 | None:intergenic | 35.0% | |
| TTTGTTTGGCTGTCTTTGAA+TGG | - | chr1.1:1045338-1045357 | MS.gene27041:intron | 35.0% | |
| ! | AAAGGACTTTTCTCACTAAC+TGG | - | chr1.1:1041778-1041797 | MS.gene27041:CDS | 35.0% |
| ! | AAAGGCATGAAGGGTAAAAT+GGG | - | chr1.1:1042499-1042518 | MS.gene27041:intron | 35.0% |
| ! | AACTCTGATCTCCTATTTTC+TGG | - | chr1.1:1043660-1043679 | MS.gene27041:intron | 35.0% |
| ! | AGTGTCGTGAACATTTTGTT+TGG | - | chr1.1:1045324-1045343 | MS.gene27041:intron | 35.0% |
| ! | ATTCGTTTGTTGATTAGCTG+AGG | - | chr1.1:1046552-1046571 | MS.gene27041:intron | 35.0% |
| ! | CGACTAATCTGATTTGAACT+AGG | + | chr1.1:1042199-1042218 | None:intergenic | 35.0% |
| ! | GAAGCATAGTTAATCCCTTT+TGG | - | chr1.1:1046800-1046819 | MS.gene27041:intron | 35.0% |
| ! | GTACAAAAGAAAGGCATGAA+GGG | - | chr1.1:1042490-1042509 | MS.gene27041:intron | 35.0% |
| ! | GTCGTGGTCTATTGAATTTT+AGG | + | chr1.1:1043338-1043357 | None:intergenic | 35.0% |
| ! | TAAGTCAGCTTTTATATGGC+AGG | + | chr1.1:1043270-1043289 | None:intergenic | 35.0% |
| ! | TGATGGTTCTTCCTTTTACT+CGG | - | chr1.1:1044918-1044937 | MS.gene27041:intron | 35.0% |
| ! | TGCTTCAATCTCTTTCAAGT+GGG | + | chr1.1:1047223-1047242 | None:intergenic | 35.0% |
| ! | TTCGTTGAATAGTTTGTGTC+AGG | - | chr1.1:1045529-1045548 | MS.gene27041:intron | 35.0% |
| ! | TTCGTTTGTTGATTAGCTGA+GGG | - | chr1.1:1046553-1046572 | MS.gene27041:intron | 35.0% |
| ! | TTTTTGATGTATACACCTGC+TGG | - | chr1.1:1042348-1042367 | MS.gene27041:intron | 35.0% |
| !! | ACTGGTTTGATCAAAAAAGG+GGG | + | chr1.1:1046836-1046855 | None:intergenic | 35.0% |
| !! | AGTATTAGTTTCTGGGGTTA+AGG | + | chr1.1:1042433-1042452 | None:intergenic | 35.0% |
| !! | CACTGGTTTGATCAAAAAAG+GGG | + | chr1.1:1046837-1046856 | None:intergenic | 35.0% |
| !!! | AGTTTTTTGGCAACATCATG+CGG | - | chr1.1:1042768-1042787 | MS.gene27041:CDS | 35.0% |
| !!! | CGTTTTTTTGAACAGGCATA+AGG | + | chr1.1:1046719-1046738 | None:intergenic | 35.0% |
| !!! | CTGGGCTATTTTTCTTGTTT+GGG | - | chr1.1:1046346-1046365 | MS.gene27041:intron | 35.0% |
| !!! | GTTTGCTGTTCTCTCATTTT+AGG | - | chr1.1:1046074-1046093 | MS.gene27041:CDS | 35.0% |
| !!! | TCTTCTTGTGCTCAGTTTTT+TGG | - | chr1.1:1042755-1042774 | MS.gene27041:CDS | 35.0% |
| !!! | TGTTTTTTATCAGCGAGTTC+TGG | - | chr1.1:1041912-1041931 | MS.gene27041:intron | 35.0% |
| !!! | TTCCGTTGTGTTATTTTTCC+TGG | - | chr1.1:1045393-1045412 | MS.gene27041:intron | 35.0% |
| AAAGACATTCTCAACGGATG+AGG | - | chr1.1:1042618-1042637 | MS.gene27041:intron | 40.0% | |
| AAATGCAGCCAAAACCTCAT+GGG | + | chr1.1:1042596-1042615 | None:intergenic | 40.0% | |
| AACAAGAGAGAGAGAGAGTT+GGG | - | chr1.1:1041545-1041564 | MS.gene27041:CDS | 40.0% | |
| AACTCACAAGCAAATTACGG+AGG | - | chr1.1:1045764-1045783 | MS.gene27041:intron | 40.0% | |
| AATGAGTAAGACTGATCTGG+AGG | + | chr1.1:1042734-1042753 | None:intergenic | 40.0% | |
| ACAATCAACAGCAACCATTG+TGG | + | chr1.1:1044815-1044834 | None:intergenic | 40.0% | |
| ACATAGGCTGACCAGAAAAT+AGG | + | chr1.1:1043674-1043693 | None:intergenic | 40.0% | |
| ACCCAATACCTTGTTCAAAG+GGG | + | chr1.1:1041959-1041978 | None:intergenic | 40.0% | |
| ACGATTGAAAGAGAGTGAGT+TGG | - | chr1.1:1047104-1047123 | MS.gene27041:intron | 40.0% | |
| ACTACACGAAATTGTTCCTG+GGG | - | chr1.1:1046161-1046180 | MS.gene27041:CDS | 40.0% | |
| AGGGATAAGATCTACCACAA+TGG | - | chr1.1:1044798-1044817 | MS.gene27041:intron | 40.0% | |
| AGGGATTAACTATGCTTCAG+TGG | + | chr1.1:1046798-1046817 | None:intergenic | 40.0% | |
| ATGAAAACATACCTGCTCAG+GGG | + | chr1.1:1042846-1042865 | None:intergenic | 40.0% | |
| ATGAGTAAGACTGATCTGGA+GGG | + | chr1.1:1042733-1042752 | None:intergenic | 40.0% | |
| ATGTGTGGTAAGACTAGACA+AGG | - | chr1.1:1041506-1041525 | MS.gene27041:CDS | 40.0% | |
| ATTTCATCCACAGACAATGG+TGG | + | chr1.1:1044172-1044191 | None:intergenic | 40.0% | |
| CACAAAGTAATGCACAACAC+TGG | + | chr1.1:1046854-1046873 | None:intergenic | 40.0% | |
| CACTACACGAAATTGTTCCT+GGG | - | chr1.1:1046160-1046179 | MS.gene27041:CDS | 40.0% | |
| CAGCCTATGTGCATTCAAAA+TGG | - | chr1.1:1043684-1043703 | MS.gene27041:intron | 40.0% | |
| CATCAGACAATTATCAGTCG+TGG | + | chr1.1:1043354-1043373 | None:intergenic | 40.0% | |
| CTCTGTGATGCCAAAAGTTA+CGG | + | chr1.1:1043560-1043579 | None:intergenic | 40.0% | |
| CTTACAAGTGGATGATTCCA+AGG | - | chr1.1:1047164-1047183 | MS.gene27041:intron | 40.0% | |
| GAAATGGTTCTCTGTGAAGA+TGG | - | chr1.1:1044835-1044854 | MS.gene27041:intron | 40.0% | |
| GAACCCAATACCTTGTTCAA+AGG | + | chr1.1:1041961-1041980 | None:intergenic | 40.0% | |
| GAACTAGGTAAACCCACTTA+CGG | + | chr1.1:1042184-1042203 | None:intergenic | 40.0% | |
| GAGAGAACAGTTGAGGAAAA+AGG | - | chr1.1:1047140-1047159 | MS.gene27041:intron | 40.0% | |
| GAGGAAAAAGGACTTACAAG+TGG | - | chr1.1:1047152-1047171 | MS.gene27041:intron | 40.0% | |
| GAGGGAACAGTTGAGAAAAA+AGG | - | chr1.1:1047287-1047306 | MS.gene27041:intron | 40.0% | |
| GATGGCAACGAATAATCCAT+TGG | + | chr1.1:1043617-1043636 | None:intergenic | 40.0% | |
| GGACTTCACAATAGATCGAA+AGG | - | chr1.1:1046182-1046201 | MS.gene27041:CDS | 40.0% | |
| GGCTATGAAGTTCGGAAAAA+GGG | - | chr1.1:1045861-1045880 | MS.gene27041:CDS | 40.0% | |
| GGCTCTTGAACCAATGTTAA+TGG | + | chr1.1:1045972-1045991 | None:intergenic | 40.0% | |
| GGTTAAGGAGAAAACTAGAC+CGG | + | chr1.1:1042418-1042437 | None:intergenic | 40.0% | |
| GTGCTTCAATCTCTTTCAAG+TGG | + | chr1.1:1047224-1047243 | None:intergenic | 40.0% | |
| GTGTAACGAAATTCCTCCAA+AGG | + | chr1.1:1045656-1045675 | None:intergenic | 40.0% | |
| TATGTCATTATGTCCTGCCA+TGG | - | chr1.1:1041822-1041841 | MS.gene27041:intron | 40.0% | |
| TGATTCCAAGGAAGGAAAAG+TGG | - | chr1.1:1047176-1047195 | MS.gene27041:intron | 40.0% | |
| TGCTTGATTAGATTGTTGGG+TGG | - | chr1.1:1041445-1041464 | MS.gene27041:CDS | 40.0% | |
| TGTGGTAGATCTTATCCCTT+TGG | + | chr1.1:1044797-1044816 | None:intergenic | 40.0% | |
| TTGCTCCTTAGCTGATATAC+AGG | - | chr1.1:1045149-1045168 | MS.gene27041:intron | 40.0% | |
| TTTCAACTGTAGCCTCTGTT+AGG | - | chr1.1:1044324-1044343 | MS.gene27041:intron | 40.0% | |
| TTTCGTGATACCAAAGTAGC+AGG | + | chr1.1:1046533-1046552 | None:intergenic | 40.0% | |
| ! | CAAAACTGCCACTGTTTTCA+AGG | + | chr1.1:1042158-1042177 | None:intergenic | 40.0% |
| ! | GAAAGGCATGAAGGGTAAAA+TGG | - | chr1.1:1042498-1042517 | MS.gene27041:intron | 40.0% |
| ! | GAAAGTTACCTTCTTTTCCG+CGG | + | chr1.1:1041352-1041371 | None:intergenic | 40.0% |
| ! | GGTACAAAAGAAAGGCATGA+AGG | - | chr1.1:1042489-1042508 | MS.gene27041:intron | 40.0% |
| ! | GGTTGCTGTTGATTGTGAAA+TGG | - | chr1.1:1044819-1044838 | MS.gene27041:intron | 40.0% |
| ! | TAGGCATCCTTTTCAACTTC+AGG | + | chr1.1:1047057-1047076 | None:intergenic | 40.0% |
| ! | TCAGGTATTGTGGTAGTGAA+TGG | + | chr1.1:1046602-1046621 | None:intergenic | 40.0% |
| !! | AATGTCAACAAGAGTACCGA+AGG | + | chr1.1:1046317-1046336 | None:intergenic | 40.0% |
| !! | ATGATCCACTTTTCCTTCCT+TGG | + | chr1.1:1047184-1047203 | None:intergenic | 40.0% |
| !! | CTGTTTTGGGCTATGAAGTT+CGG | - | chr1.1:1045853-1045872 | MS.gene27041:intron | 40.0% |
| !! | GAGTTCTGGTTCTAGTGATA+AGG | - | chr1.1:1041926-1041945 | MS.gene27041:intron | 40.0% |
| !! | TCCCTTTGGCCTTTTTCTTA+AGG | + | chr1.1:1044783-1044802 | None:intergenic | 40.0% |
| !!! | GCTGGGCTATTTTTCTTGTT+TGG | - | chr1.1:1046345-1046364 | MS.gene27041:intron | 40.0% |
| AACCTCTTCCTCAGAACAGT+GGG | + | chr1.1:1046237-1046256 | None:intergenic | 45.0% | |
| AAGCGCAATGCCTCAATCTT+TGG | + | chr1.1:1044975-1044994 | None:intergenic | 45.0% | |
| AAGCGGAGATTGAATCATCG+AGG | - | chr1.1:1047268-1047287 | MS.gene27041:intron | 45.0% | |
| ACAAGAGAGAGAGAGAGTTG+GGG | - | chr1.1:1041546-1041565 | MS.gene27041:CDS | 45.0% | |
| AGCGCAATGCCTCAATCTTT+GGG | + | chr1.1:1044974-1044993 | None:intergenic | 45.0% | |
| AGCGGAGATTGAATCATCGA+GGG | - | chr1.1:1047269-1047288 | MS.gene27041:intron | 45.0% | |
| ATCAGCCACAAGCACATAGT+AGG | + | chr1.1:1043446-1043465 | None:intergenic | 45.0% | |
| ATGACGAGTCACCGAGTAAA+AGG | + | chr1.1:1044932-1044951 | None:intergenic | 45.0% | |
| ATGCATAACAGTACCATGGC+AGG | + | chr1.1:1041838-1041857 | None:intergenic | 45.0% | |
| ATGTGCTTGTGGCTGATGAT+GGG | - | chr1.1:1043449-1043468 | MS.gene27041:intron | 45.0% | |
| CAACAAGAGAGAGAGAGAGT+TGG | - | chr1.1:1041544-1041563 | MS.gene27041:CDS | 45.0% | |
| CAAGTGGATGATTCCAAGGA+AGG | - | chr1.1:1047168-1047187 | MS.gene27041:intron | 45.0% | |
| CACAATTACGGTCATGATGC+TGG | + | chr1.1:1042058-1042077 | None:intergenic | 45.0% | |
| CAGAACAGTGGGATGCTTAA+AGG | + | chr1.1:1046226-1046245 | None:intergenic | 45.0% | |
| CAGCATCATGACCGTAATTG+TGG | - | chr1.1:1042056-1042075 | MS.gene27041:intron | 45.0% | |
| CCCAATACCTTGTTCAAAGG+GGG | + | chr1.1:1041958-1041977 | None:intergenic | 45.0% | |
| CTCAACGGATGAGGATTTGA+AGG | - | chr1.1:1042627-1042646 | MS.gene27041:intron | 45.0% | |
| CTGTGAATAGAGCCATCCAA+GGG | + | chr1.1:1045503-1045522 | None:intergenic | 45.0% | |
| CTTATCTCCTTGACCGTTTC+TGG | + | chr1.1:1046404-1046423 | None:intergenic | 45.0% | |
| CTTCCTCTTAAAGCCATACC+CGG | - | chr1.1:1043078-1043097 | MS.gene27041:intron | 45.0% | |
| GAAATGCAGCCAAAACCTCA+TGG | + | chr1.1:1042597-1042616 | None:intergenic | 45.0% | |
| GCACTACACGAAATTGTTCC+TGG | - | chr1.1:1046159-1046178 | MS.gene27041:CDS | 45.0% | |
| GGGCTATGAAGTTCGGAAAA+AGG | - | chr1.1:1045860-1045879 | MS.gene27041:CDS | 45.0% | |
| GTATGAGCGATCCATCAAAG+AGG | - | chr1.1:1042569-1042588 | MS.gene27041:CDS | 45.0% | |
| GTGGTAAGACTAGACAAGGT+GGG | - | chr1.1:1041510-1041529 | MS.gene27041:CDS | 45.0% | |
| GTTGACATTCAGTCACTGCT+GGG | - | chr1.1:1046328-1046347 | MS.gene27041:intron | 45.0% | |
| TACATCTTCCAACCCTTGGA+TGG | - | chr1.1:1045488-1045507 | MS.gene27041:intron | 45.0% | |
| TAGTGCTTCAGTGTTCACAG+TGG | + | chr1.1:1046145-1046164 | None:intergenic | 45.0% | |
| TATGTGCTTGTGGCTGATGA+TGG | - | chr1.1:1043448-1043467 | MS.gene27041:intron | 45.0% | |
| TCCCCCTTTGAACAAGGTAT+TGG | - | chr1.1:1041954-1041973 | MS.gene27041:intron | 45.0% | |
| TGAAGATGGGACTGAAGCTT+TGG | - | chr1.1:1044849-1044868 | MS.gene27041:intron | 45.0% | |
| TGAAGGGTAAAATGGGAGAC+TGG | - | chr1.1:1042506-1042525 | MS.gene27041:CDS | 45.0% | |
| TGCAGAAACTTGTCACGTGT+CGG | - | chr1.1:1046893-1046912 | MS.gene27041:intron | 45.0% | |
| TGCATACATCTTCCAACCCT+TGG | - | chr1.1:1045484-1045503 | MS.gene27041:intron | 45.0% | |
| TGCTGTGGAAAATGAAGGGA+TGG | - | chr1.1:1044746-1044765 | MS.gene27041:intron | 45.0% | |
| TGTGGTAAGACTAGACAAGG+TGG | - | chr1.1:1041509-1041528 | MS.gene27041:CDS | 45.0% | |
| TGTTGACATTCAGTCACTGC+TGG | - | chr1.1:1046327-1046346 | MS.gene27041:intron | 45.0% | |
| TTAAGCATCCCACTGTTCTG+AGG | - | chr1.1:1046226-1046245 | MS.gene27041:intron | 45.0% | |
| TTGCTTCAGCCTTCCAGAAA+CGG | - | chr1.1:1046388-1046407 | MS.gene27041:intron | 45.0% | |
| ! | AAAGAGGTCCCATGAGGTTT+TGG | - | chr1.1:1042585-1042604 | MS.gene27041:CDS | 45.0% |
| ! | ATAAACATAGCGGGGATGTG+TGG | - | chr1.1:1041491-1041510 | MS.gene27041:CDS | 45.0% |
| ! | ATGCTCAATGCCTGCTACTT+TGG | - | chr1.1:1046520-1046539 | MS.gene27041:intron | 45.0% |
| ! | CCCCCTTTGAACAAGGTATT+GGG | - | chr1.1:1041955-1041974 | MS.gene27041:intron | 45.0% |
| ! | CGTAACTTTTGGCATCACAG+AGG | - | chr1.1:1043558-1043577 | MS.gene27041:CDS | 45.0% |
| ! | GAGTTTTCCCCCTTTGAACA+AGG | - | chr1.1:1041948-1041967 | MS.gene27041:intron | 45.0% |
| !! | GCAGTTTTGTCTCCGTAAGT+GGG | - | chr1.1:1042169-1042188 | MS.gene27041:intron | 45.0% |
| AAGCCAAAGACACATGCAGC+CGG | + | chr1.1:1043100-1043119 | None:intergenic | 50.0% | |
| ACCTCATGGGACCTCTTTGA+TGG | + | chr1.1:1042583-1042602 | None:intergenic | 50.0% | |
| AGATTTACCAGAGGGCGAGA+TGG | - | chr1.1:1046996-1047015 | MS.gene27041:intron | 50.0% | |
| ATCTGTGCTTGTCTGCGCTT+TGG | - | chr1.1:1045712-1045731 | MS.gene27041:intron | 50.0% | |
| ATGCATCATGTGCCTCTCGT+TGG | + | chr1.1:1046453-1046472 | None:intergenic | 50.0% | |
| CAATGCCTCAATCTTTGGGC+AGG | + | chr1.1:1044970-1044989 | None:intergenic | 50.0% | |
| CCAGCACCCTATGTATCCAA+TGG | - | chr1.1:1043598-1043617 | MS.gene27041:CDS | 50.0% | |
| CCATTGGATACATAGGGTGC+TGG | + | chr1.1:1043601-1043620 | None:intergenic | 50.0% | |
| CCTCAATCTTTGGGCAGGTA+GGG | + | chr1.1:1044965-1044984 | None:intergenic | 50.0% | |
| CCTGTGAATAGAGCCATCCA+AGG | + | chr1.1:1045504-1045523 | None:intergenic | 50.0% | |
| CGATCTATTGTGAAGTCCCC+AGG | + | chr1.1:1046180-1046199 | None:intergenic | 50.0% | |
| CGCTTCCTACTATGTGCTTG+TGG | - | chr1.1:1043438-1043457 | MS.gene27041:intron | 50.0% | |
| GAACCTCTTCCTCAGAACAG+TGG | + | chr1.1:1046238-1046257 | None:intergenic | 50.0% | |
| GAATAGAGCCATCCAAGGGT+TGG | + | chr1.1:1045499-1045518 | None:intergenic | 50.0% | |
| GATTGACACCGCGGAAAAGA+AGG | - | chr1.1:1041341-1041360 | MS.gene27041:CDS | 50.0% | |
| GCGTGCTGCAATCTCTTGAA+TGG | + | chr1.1:1042104-1042123 | None:intergenic | 50.0% | |
| GCTTCAGTGTTCACAGTGGT+TGG | + | chr1.1:1046141-1046160 | None:intergenic | 50.0% | |
| GGATGAGAAGATTGACACCG+CGG | - | chr1.1:1041332-1041351 | MS.gene27041:CDS | 50.0% | |
| GGGTAAAATGGGAGACTGGA+AGG | - | chr1.1:1042510-1042529 | MS.gene27041:CDS | 50.0% | |
| TAAGGCCTCTCTCCTAACAG+AGG | + | chr1.1:1044339-1044358 | None:intergenic | 50.0% | |
| TCCATCAAAGAGGTCCCATG+AGG | - | chr1.1:1042579-1042598 | MS.gene27041:CDS | 50.0% | |
| TGTAGCCTCTGTTAGGAGAG+AGG | - | chr1.1:1044331-1044350 | MS.gene27041:intron | 50.0% | |
| TGTCCAAGGCAGCCAAACAA+AGG | - | chr1.1:1046480-1046499 | MS.gene27041:intron | 50.0% | |
| TTTGGGCAGGTAGGGAAGAA+GGG | + | chr1.1:1044957-1044976 | None:intergenic | 50.0% | |
| ! | CCTTGGATGGCTCTATTCAC+AGG | - | chr1.1:1045501-1045520 | MS.gene27041:intron | 50.0% |
| ! | GTACCTTTGTTTGGCTGCCT+TGG | + | chr1.1:1046486-1046505 | None:intergenic | 50.0% |
| ! | TCTCCTTGACCGTTTCTGGA+AGG | + | chr1.1:1046400-1046419 | None:intergenic | 50.0% |
| !! | AAAAGCGCCACCATTGTCTG+TGG | - | chr1.1:1044162-1044181 | MS.gene27041:intron | 50.0% |
| !! | ATCCCACTGTTCTGAGGAAG+AGG | - | chr1.1:1046232-1046251 | MS.gene27041:intron | 50.0% |
| !! | CGGGTATGGCTTTAAGAGGA+AGG | + | chr1.1:1043080-1043099 | None:intergenic | 50.0% |
| !! | GGCAGTTTTGTCTCCGTAAG+TGG | - | chr1.1:1042168-1042187 | MS.gene27041:intron | 50.0% |
| !! | TAGGGTGCTGGAGAGTTACT+TGG | + | chr1.1:1043589-1043608 | None:intergenic | 50.0% |
| AAGACACATGCAGCCGGGTA+TGG | + | chr1.1:1043094-1043113 | None:intergenic | 55.0% | |
| ACATCAACCATCTCGCCCTC+TGG | + | chr1.1:1047006-1047025 | None:intergenic | 55.0% | |
| AGCCAAAGACACATGCAGCC+GGG | + | chr1.1:1043099-1043118 | None:intergenic | 55.0% | |
| ATCTCACGATTCCCCTGAGC+AGG | - | chr1.1:1042832-1042851 | MS.gene27041:CDS | 55.0% | |
| CAGCCTTCCAGAAACGGTCA+AGG | - | chr1.1:1046394-1046413 | MS.gene27041:intron | 55.0% | |
| CCCTACCTGCCCAAAGATTG+AGG | - | chr1.1:1044962-1044981 | MS.gene27041:intron | 55.0% | |
| CGGTCATGATGCTGGTGCAA+TGG | + | chr1.1:1042050-1042069 | None:intergenic | 55.0% | |
| CTTTGGGCAGGTAGGGAAGA+AGG | + | chr1.1:1044958-1044977 | None:intergenic | 55.0% | |
| GCCTCAATCTTTGGGCAGGT+AGG | + | chr1.1:1044966-1044985 | None:intergenic | 55.0% | |
| TACCCGGCTGCATGTGTCTT+TGG | - | chr1.1:1043094-1043113 | MS.gene27041:intron | 55.0% | |
| TTGGGCAGGTAGGGAAGAAG+GGG | + | chr1.1:1044956-1044975 | None:intergenic | 55.0% | |
| !! | CAGCCGGGTATGGCTTTAAG+AGG | + | chr1.1:1043084-1043103 | None:intergenic | 55.0% |
| !! | TGTCACGTGTCGGCTGAGTA+CGG | - | chr1.1:1046903-1046922 | MS.gene27041:intron | 55.0% |
| GGGGAGCAGCAAGCCCAAAA+GGG | + | chr1.1:1046817-1046836 | None:intergenic | 60.0% | |
| TTGCAGCACGCTTGCAACCG+CGG | - | chr1.1:1042113-1042132 | MS.gene27041:intron | 60.0% | |
| !! | GTCACGTGTCGGCTGAGTAC+GGG | - | chr1.1:1046904-1046923 | MS.gene27041:intron | 60.0% |
| GGGGGAGCAGCAAGCCCAAA+AGG | + | chr1.1:1046818-1046837 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 1041330 | 1047377 | 1041330 | ID=MS.gene27041 |
| chr1.1 | mRNA | 1041330 | 1047377 | 1041330 | ID=MS.gene27041.t1;Parent=MS.gene27041 |
| chr1.1 | exon | 1047345 | 1047377 | 1047345 | ID=MS.gene27041.t1.exon1;Parent=MS.gene27041.t1 |
| chr1.1 | CDS | 1047345 | 1047377 | 1047345 | ID=cds.MS.gene27041.t1;Parent=MS.gene27041.t1 |
| chr1.1 | exon | 1046059 | 1046241 | 1046059 | ID=MS.gene27041.t1.exon2;Parent=MS.gene27041.t1 |
| chr1.1 | CDS | 1046059 | 1046241 | 1046059 | ID=cds.MS.gene27041.t1;Parent=MS.gene27041.t1 |
| chr1.1 | exon | 1045854 | 1045937 | 1045854 | ID=MS.gene27041.t1.exon3;Parent=MS.gene27041.t1 |
| chr1.1 | CDS | 1045854 | 1045937 | 1045854 | ID=cds.MS.gene27041.t1;Parent=MS.gene27041.t1 |
| chr1.1 | exon | 1045061 | 1045129 | 1045061 | ID=MS.gene27041.t1.exon4;Parent=MS.gene27041.t1 |
| chr1.1 | CDS | 1045061 | 1045129 | 1045061 | ID=cds.MS.gene27041.t1;Parent=MS.gene27041.t1 |
| chr1.1 | exon | 1043804 | 1043944 | 1043804 | ID=MS.gene27041.t1.exon5;Parent=MS.gene27041.t1 |
| chr1.1 | CDS | 1043804 | 1043944 | 1043804 | ID=cds.MS.gene27041.t1;Parent=MS.gene27041.t1 |
| chr1.1 | exon | 1043537 | 1043653 | 1043537 | ID=MS.gene27041.t1.exon6;Parent=MS.gene27041.t1 |
| chr1.1 | CDS | 1043537 | 1043653 | 1043537 | ID=cds.MS.gene27041.t1;Parent=MS.gene27041.t1 |
| chr1.1 | exon | 1043387 | 1043456 | 1043387 | ID=MS.gene27041.t1.exon7;Parent=MS.gene27041.t1 |
| chr1.1 | CDS | 1043387 | 1043456 | 1043387 | ID=cds.MS.gene27041.t1;Parent=MS.gene27041.t1 |
| chr1.1 | exon | 1043157 | 1043257 | 1043157 | ID=MS.gene27041.t1.exon8;Parent=MS.gene27041.t1 |
| chr1.1 | CDS | 1043157 | 1043257 | 1043157 | ID=cds.MS.gene27041.t1;Parent=MS.gene27041.t1 |
| chr1.1 | exon | 1042715 | 1042855 | 1042715 | ID=MS.gene27041.t1.exon9;Parent=MS.gene27041.t1 |
| chr1.1 | CDS | 1042715 | 1042855 | 1042715 | ID=cds.MS.gene27041.t1;Parent=MS.gene27041.t1 |
| chr1.1 | exon | 1042504 | 1042611 | 1042504 | ID=MS.gene27041.t1.exon10;Parent=MS.gene27041.t1 |
| chr1.1 | CDS | 1042504 | 1042611 | 1042504 | ID=cds.MS.gene27041.t1;Parent=MS.gene27041.t1 |
| chr1.1 | exon | 1042206 | 1042310 | 1042206 | ID=MS.gene27041.t1.exon11;Parent=MS.gene27041.t1 |
| chr1.1 | CDS | 1042206 | 1042310 | 1042206 | ID=cds.MS.gene27041.t1;Parent=MS.gene27041.t1 |
| chr1.1 | exon | 1041330 | 1041830 | 1041330 | ID=MS.gene27041.t1.exon12;Parent=MS.gene27041.t1 |
| chr1.1 | CDS | 1041330 | 1041830 | 1041330 | ID=cds.MS.gene27041.t1;Parent=MS.gene27041.t1 |
| Gene Sequence |
| Protein sequence |
