Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21700.t1 | XP_003610935.1 | 89.3 | 503 | 51 | 2 | 1 | 501 | 1 | 502 | 3.70E-193 | 684.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21700.t1 | Q93ZG9 | 56.2 | 507 | 184 | 9 | 1 | 499 | 1 | 477 | 2.6e-78 | 294.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21700.t1 | G7K7Y8 | 89.3 | 503 | 51 | 2 | 1 | 501 | 1 | 502 | 2.7e-193 | 684.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene21700 | 0.808672 | 2.76E-50 | -1.69E-46 |
| MS.gene049159 | MS.gene21700 | 0.814038 | 1.89E-51 | -1.69E-46 |
| MS.gene049207 | MS.gene21700 | 0.84036 | 9.12E-58 | -1.69E-46 |
| MS.gene049254 | MS.gene21700 | 0.832194 | 1.09E-55 | -1.69E-46 |
| MS.gene049255 | MS.gene21700 | 0.801382 | 9.24E-49 | -1.69E-46 |
| MS.gene049343 | MS.gene21700 | 0.801395 | 9.19E-49 | -1.69E-46 |
| MS.gene049473 | MS.gene21700 | 0.804733 | 1.87E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene21700 | 0.836058 | 1.17E-56 | -1.69E-46 |
| MS.gene049824 | MS.gene21700 | 0.85214 | 5.61E-61 | -1.69E-46 |
| MS.gene049825 | MS.gene21700 | 0.848513 | 5.84E-60 | -1.69E-46 |
| MS.gene049850 | MS.gene21700 | 0.801879 | 7.31E-49 | -1.69E-46 |
| MS.gene049873 | MS.gene21700 | 0.849916 | 2.38E-60 | -1.69E-46 |
| MS.gene050277 | MS.gene21700 | 0.808621 | 2.83E-50 | -1.69E-46 |
| MS.gene050303 | MS.gene21700 | 0.850078 | 2.14E-60 | -1.69E-46 |
| MS.gene050355 | MS.gene21700 | 0.814667 | 1.37E-51 | -1.69E-46 |
| MS.gene050427 | MS.gene21700 | 0.804883 | 1.74E-49 | -1.69E-46 |
| MS.gene050559 | MS.gene21700 | 0.831899 | 1.29E-55 | -1.69E-46 |
| MS.gene050561 | MS.gene21700 | 0.827996 | 1.15E-54 | -1.69E-46 |
| MS.gene050562 | MS.gene21700 | 0.817744 | 2.81E-52 | -1.69E-46 |
| MS.gene050885 | MS.gene21700 | 0.825853 | 3.74E-54 | -1.69E-46 |
| MS.gene051198 | MS.gene21700 | 0.804961 | 1.68E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene21700 | 0.807484 | 4.94E-50 | -1.69E-46 |
| MS.gene051328 | MS.gene21700 | 0.817197 | 3.74E-52 | -1.69E-46 |
| MS.gene05134 | MS.gene21700 | 0.810185 | 1.31E-50 | -1.69E-46 |
| MS.gene051363 | MS.gene21700 | 0.820424 | 6.91E-53 | -1.69E-46 |
| MS.gene051574 | MS.gene21700 | 0.826412 | 2.75E-54 | -1.69E-46 |
| MS.gene051597 | MS.gene21700 | 0.802367 | 5.80E-49 | -1.69E-46 |
| MS.gene051700 | MS.gene21700 | 0.836632 | 8.35E-57 | -1.69E-46 |
| MS.gene051744 | MS.gene21700 | 0.854618 | 1.09E-61 | -1.69E-46 |
| MS.gene05188 | MS.gene21700 | 0.85492 | 8.92E-62 | -1.69E-46 |
| MS.gene051975 | MS.gene21700 | 0.853501 | 2.29E-61 | -1.69E-46 |
| MS.gene052012 | MS.gene21700 | 0.80264 | 5.10E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene21700 | 0.829285 | 5.61E-55 | -1.69E-46 |
| MS.gene052582 | MS.gene21700 | 0.850518 | 1.61E-60 | -1.69E-46 |
| MS.gene052584 | MS.gene21700 | 0.862618 | 4.46E-64 | -1.69E-46 |
| MS.gene052717 | MS.gene21700 | 0.81278 | 3.57E-51 | -1.69E-46 |
| MS.gene052867 | MS.gene21700 | 0.808637 | 2.81E-50 | -1.69E-46 |
| MS.gene052947 | MS.gene21700 | 0.807952 | 3.93E-50 | -1.69E-46 |
| MS.gene053006 | MS.gene21700 | 0.815527 | 8.83E-52 | -1.69E-46 |
| MS.gene053008 | MS.gene21700 | 0.808085 | 3.68E-50 | -1.69E-46 |
| MS.gene053058 | MS.gene21700 | 0.833914 | 4.06E-56 | -1.69E-46 |
| MS.gene053080 | MS.gene21700 | 0.834154 | 3.53E-56 | -1.69E-46 |
| MS.gene05308 | MS.gene21700 | 0.82093 | 5.29E-53 | -1.69E-46 |
| MS.gene053122 | MS.gene21700 | 0.840176 | 1.02E-57 | -1.69E-46 |
| MS.gene053226 | MS.gene21700 | 0.902476 | 9.32E-79 | -1.69E-46 |
| MS.gene053230 | MS.gene21700 | 0.806521 | 7.90E-50 | -1.69E-46 |
| MS.gene05364 | MS.gene21700 | 0.8121 | 5.02E-51 | -1.69E-46 |
| MS.gene05365 | MS.gene21700 | 0.820655 | 6.11E-53 | -1.69E-46 |
| MS.gene053931 | MS.gene21700 | 0.813475 | 2.51E-51 | -1.69E-46 |
| MS.gene053963 | MS.gene21700 | 0.802173 | 6.36E-49 | -1.69E-46 |
| MS.gene053995 | MS.gene21700 | 0.821753 | 3.41E-53 | -1.69E-46 |
| MS.gene054651 | MS.gene21700 | 0.836185 | 1.09E-56 | -1.69E-46 |
| MS.gene054657 | MS.gene21700 | 0.823481 | 1.35E-53 | -1.69E-46 |
| MS.gene054658 | MS.gene21700 | 0.814969 | 1.18E-51 | -1.69E-46 |
| MS.gene054775 | MS.gene21700 | 0.80825 | 3.40E-50 | -1.69E-46 |
| MS.gene055166 | MS.gene21700 | 0.839326 | 1.69E-57 | -1.69E-46 |
| MS.gene05517 | MS.gene21700 | 0.835109 | 2.03E-56 | -1.69E-46 |
| MS.gene055222 | MS.gene21700 | 0.812392 | 4.34E-51 | -1.69E-46 |
| MS.gene055512 | MS.gene21700 | 0.832918 | 7.18E-56 | -1.69E-46 |
| MS.gene055513 | MS.gene21700 | 0.807419 | 5.10E-50 | -1.69E-46 |
| MS.gene055555 | MS.gene21700 | 0.802757 | 4.82E-49 | -1.69E-46 |
| MS.gene055586 | MS.gene21700 | 0.823494 | 1.34E-53 | -1.69E-46 |
| MS.gene055589 | MS.gene21700 | 0.83225 | 1.05E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene21700 | 0.808585 | 2.88E-50 | -1.69E-46 |
| MS.gene055623 | MS.gene21700 | 0.803031 | 4.23E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene21700 | 0.837908 | 3.94E-57 | -1.69E-46 |
| MS.gene055808 | MS.gene21700 | 0.863092 | 3.19E-64 | -1.69E-46 |
| MS.gene055818 | MS.gene21700 | 0.812336 | 4.46E-51 | -1.69E-46 |
| MS.gene055841 | MS.gene21700 | 0.813344 | 2.68E-51 | -1.69E-46 |
| MS.gene056050 | MS.gene21700 | 0.803757 | 2.99E-49 | -1.69E-46 |
| MS.gene056091 | MS.gene21700 | 0.853073 | 3.04E-61 | -1.69E-46 |
| MS.gene056215 | MS.gene21700 | 0.829062 | 6.35E-55 | -1.69E-46 |
| MS.gene056366 | MS.gene21700 | 0.806105 | 9.67E-50 | -1.69E-46 |
| MS.gene056403 | MS.gene21700 | 0.879097 | 1.64E-69 | -1.69E-46 |
| MS.gene056506 | MS.gene21700 | 0.805493 | 1.30E-49 | -1.69E-46 |
| MS.gene05659 | MS.gene21700 | 0.836734 | 7.87E-57 | -1.69E-46 |
| MS.gene056605 | MS.gene21700 | 0.880898 | 3.75E-70 | -1.69E-46 |
| MS.gene056631 | MS.gene21700 | 0.828942 | 6.79E-55 | -1.69E-46 |
| MS.gene05686 | MS.gene21700 | 0.815984 | 6.99E-52 | -1.69E-46 |
| MS.gene05689 | MS.gene21700 | 0.858229 | 9.50E-63 | -1.69E-46 |
| MS.gene056948 | MS.gene21700 | 0.805365 | 1.38E-49 | -1.69E-46 |
| MS.gene056986 | MS.gene21700 | 0.837719 | 4.40E-57 | -1.69E-46 |
| MS.gene057034 | MS.gene21700 | 0.800098 | 1.69E-48 | -1.69E-46 |
| MS.gene057102 | MS.gene21700 | 0.812065 | 5.11E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene21700 | 0.832939 | 7.10E-56 | -1.69E-46 |
| MS.gene057314 | MS.gene21700 | 0.856173 | 3.85E-62 | -1.69E-46 |
| MS.gene057555 | MS.gene21700 | 0.805654 | 1.20E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene21700 | 0.821743 | 3.43E-53 | -1.69E-46 |
| MS.gene057705 | MS.gene21700 | 0.81565 | 8.29E-52 | -1.69E-46 |
| MS.gene057915 | MS.gene21700 | 0.841543 | 4.46E-58 | -1.69E-46 |
| MS.gene058037 | MS.gene21700 | 0.837782 | 4.24E-57 | -1.69E-46 |
| MS.gene058084 | MS.gene21700 | 0.820055 | 8.39E-53 | -1.69E-46 |
| MS.gene058126 | MS.gene21700 | 0.83786 | 4.05E-57 | -1.69E-46 |
| MS.gene058548 | MS.gene21700 | 0.834873 | 2.33E-56 | -1.69E-46 |
| MS.gene058549 | MS.gene21700 | 0.804284 | 2.33E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene21700 | 0.830317 | 3.14E-55 | -1.69E-46 |
| MS.gene058783 | MS.gene21700 | 0.825286 | 5.09E-54 | -1.69E-46 |
| MS.gene058908 | MS.gene21700 | 0.826694 | 2.36E-54 | -1.69E-46 |
| MS.gene058911 | MS.gene21700 | 0.814113 | 1.82E-51 | -1.69E-46 |
| MS.gene058979 | MS.gene21700 | 0.80859 | 2.87E-50 | -1.69E-46 |
| MS.gene059146 | MS.gene21700 | 0.829962 | 3.84E-55 | -1.69E-46 |
| MS.gene059317 | MS.gene21700 | 0.816279 | 6.00E-52 | -1.69E-46 |
| MS.gene05950 | MS.gene21700 | 0.813372 | 2.65E-51 | -1.69E-46 |
| MS.gene05953 | MS.gene21700 | 0.814307 | 1.65E-51 | -1.69E-46 |
| MS.gene05954 | MS.gene21700 | 0.863014 | 3.37E-64 | -1.69E-46 |
| MS.gene059625 | MS.gene21700 | 0.815971 | 7.03E-52 | -1.69E-46 |
| MS.gene05978 | MS.gene21700 | 0.81266 | 3.79E-51 | -1.69E-46 |
| MS.gene05979 | MS.gene21700 | 0.816993 | 4.15E-52 | -1.69E-46 |
| MS.gene059830 | MS.gene21700 | 0.820915 | 5.33E-53 | -1.69E-46 |
| MS.gene059842 | MS.gene21700 | 0.828631 | 8.08E-55 | -1.69E-46 |
| MS.gene05985 | MS.gene21700 | -0.811025 | 8.61E-51 | -1.69E-46 |
| MS.gene059901 | MS.gene21700 | -0.817307 | 3.53E-52 | -1.69E-46 |
| MS.gene059935 | MS.gene21700 | 0.893354 | 6.80E-75 | -1.69E-46 |
| MS.gene06001 | MS.gene21700 | 0.808936 | 2.42E-50 | -1.69E-46 |
| MS.gene06011 | MS.gene21700 | 0.809265 | 2.06E-50 | -1.69E-46 |
| MS.gene060310 | MS.gene21700 | 0.80564 | 1.21E-49 | -1.69E-46 |
| MS.gene060365 | MS.gene21700 | 0.831168 | 1.95E-55 | -1.69E-46 |
| MS.gene060429 | MS.gene21700 | 0.883889 | 3.06E-71 | -1.69E-46 |
| MS.gene060521 | MS.gene21700 | 0.833753 | 4.45E-56 | -1.69E-46 |
| MS.gene060586 | MS.gene21700 | 0.833337 | 5.65E-56 | -1.69E-46 |
| MS.gene060763 | MS.gene21700 | 0.83291 | 7.22E-56 | -1.69E-46 |
| MS.gene060803 | MS.gene21700 | 0.804236 | 2.38E-49 | -1.69E-46 |
| MS.gene060830 | MS.gene21700 | 0.869409 | 3.17E-66 | -1.69E-46 |
| MS.gene060935 | MS.gene21700 | 0.826402 | 2.77E-54 | -1.69E-46 |
| MS.gene060937 | MS.gene21700 | 0.812499 | 4.11E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene21700 | MS.gene058508 | PPI |
| MS.gene012266 | MS.gene21700 | PPI |
| MS.gene21700 | MS.gene041902 | PPI |
| MS.gene21700 | MS.gene025139 | PPI |
| MS.gene21700 | MS.gene50106 | PPI |
| MS.gene21700 | MS.gene32487 | PPI |
| MS.gene21700 | MS.gene44488 | PPI |
| MS.gene57575 | MS.gene21700 | PPI |
| MS.gene21700 | MS.gene011742 | PPI |
| MS.gene21700 | MS.gene29552 | PPI |
| MS.gene21700 | MS.gene051853 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21700.t1 | MTR_5g008680 | 95.229 | 503 | 21 | 2 | 1 | 501 | 1 | 502 | 0.0 | 897 |
| MS.gene21700.t1 | MTR_4g032680 | 57.143 | 119 | 50 | 1 | 381 | 498 | 642 | 760 | 1.20e-38 | 150 |
| MS.gene21700.t1 | MTR_4g032680 | 37.220 | 223 | 121 | 5 | 1 | 217 | 1 | 210 | 1.06e-32 | 132 |
| MS.gene21700.t1 | MTR_4g032680 | 57.143 | 119 | 50 | 1 | 381 | 498 | 751 | 869 | 1.32e-38 | 150 |
| MS.gene21700.t1 | MTR_4g032680 | 37.220 | 223 | 121 | 5 | 1 | 217 | 1 | 210 | 1.62e-32 | 132 |
| MS.gene21700.t1 | MTR_4g032680 | 57.143 | 119 | 50 | 1 | 381 | 498 | 751 | 869 | 1.32e-38 | 150 |
| MS.gene21700.t1 | MTR_4g032680 | 37.220 | 223 | 121 | 5 | 1 | 217 | 1 | 210 | 1.62e-32 | 132 |
| MS.gene21700.t1 | MTR_4g032680 | 57.143 | 119 | 50 | 1 | 381 | 498 | 542 | 660 | 1.43e-38 | 149 |
| MS.gene21700.t1 | MTR_4g032680 | 37.220 | 223 | 121 | 5 | 1 | 217 | 1 | 210 | 6.16e-33 | 133 |
| MS.gene21700.t1 | MTR_4g094785 | 35.593 | 177 | 88 | 7 | 333 | 496 | 74 | 237 | 1.46e-21 | 94.0 |
| MS.gene21700.t1 | MTR_8g012380 | 53.684 | 95 | 37 | 4 | 408 | 498 | 46 | 137 | 2.12e-19 | 85.5 |
| MS.gene21700.t1 | MTR_8g091410 | 33.333 | 183 | 101 | 7 | 330 | 498 | 31 | 206 | 9.30e-18 | 82.4 |
| MS.gene21700.t1 | MTR_1g061850 | 34.286 | 140 | 79 | 4 | 369 | 499 | 109 | 244 | 7.93e-16 | 77.8 |
| MS.gene21700.t1 | MTR_8g080980 | 49.438 | 89 | 42 | 3 | 410 | 496 | 54 | 141 | 1.16e-14 | 77.0 |
| MS.gene21700.t1 | MTR_8g038785 | 46.316 | 95 | 48 | 2 | 405 | 496 | 181 | 275 | 1.21e-14 | 77.0 |
| MS.gene21700.t1 | MTR_8g012340 | 48.315 | 89 | 43 | 3 | 410 | 496 | 56 | 143 | 1.41e-14 | 76.6 |
| MS.gene21700.t1 | MTR_7g053470 | 47.126 | 87 | 43 | 3 | 412 | 496 | 52 | 137 | 1.79e-14 | 76.3 |
| MS.gene21700.t1 | MTR_4g068190 | 37.857 | 140 | 65 | 6 | 370 | 500 | 97 | 223 | 1.97e-12 | 67.4 |
| MS.gene21700.t1 | MTR_5g080300 | 40.659 | 91 | 48 | 3 | 415 | 501 | 35 | 123 | 3.87e-12 | 65.5 |
| MS.gene21700.t1 | MTR_1g061080 | 36.364 | 121 | 44 | 3 | 412 | 499 | 96 | 216 | 1.94e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21700.t1 | AT4G25340 | 48.062 | 516 | 212 | 16 | 1 | 499 | 1 | 477 | 5.01e-117 | 353 |
| MS.gene21700.t1 | AT4G25340 | 45.455 | 473 | 203 | 15 | 1 | 457 | 1 | 434 | 1.39e-91 | 286 |
| MS.gene21700.t1 | AT5G05420 | 64.486 | 107 | 38 | 0 | 392 | 498 | 36 | 142 | 5.91e-44 | 152 |
| MS.gene21700.t1 | AT3G12340 | 51.562 | 128 | 61 | 1 | 372 | 498 | 250 | 377 | 8.37e-36 | 137 |
| MS.gene21700.t1 | AT3G12340 | 51.562 | 128 | 61 | 1 | 372 | 498 | 250 | 377 | 8.37e-36 | 137 |
| MS.gene21700.t1 | AT3G12340 | 51.562 | 128 | 61 | 1 | 372 | 498 | 371 | 498 | 1.26e-34 | 136 |
| MS.gene21700.t1 | AT3G25220 | 51.546 | 97 | 40 | 4 | 408 | 500 | 48 | 141 | 2.27e-19 | 85.5 |
| MS.gene21700.t1 | AT5G48580 | 50.526 | 95 | 40 | 4 | 408 | 498 | 48 | 139 | 7.27e-19 | 84.3 |
| MS.gene21700.t1 | AT5G45680 | 42.500 | 120 | 53 | 5 | 391 | 497 | 90 | 206 | 1.15e-18 | 85.1 |
| MS.gene21700.t1 | AT3G25230 | 51.685 | 89 | 36 | 4 | 412 | 496 | 57 | 142 | 5.89e-16 | 80.9 |
| MS.gene21700.t1 | AT3G25230 | 51.685 | 89 | 36 | 4 | 412 | 496 | 57 | 142 | 7.79e-16 | 80.5 |
| MS.gene21700.t1 | AT5G48570 | 50.000 | 90 | 38 | 4 | 412 | 497 | 65 | 151 | 1.05e-15 | 80.5 |
| MS.gene21700.t1 | AT3G10060 | 34.194 | 155 | 87 | 5 | 354 | 499 | 69 | 217 | 3.46e-15 | 75.5 |
| MS.gene21700.t1 | AT3G55520 | 41.758 | 91 | 47 | 3 | 415 | 501 | 35 | 123 | 3.20e-13 | 68.9 |
| MS.gene21700.t1 | AT3G55520 | 41.758 | 91 | 47 | 3 | 415 | 501 | 35 | 123 | 3.20e-13 | 68.9 |
| MS.gene21700.t1 | AT3G55520 | 41.758 | 91 | 47 | 3 | 415 | 501 | 35 | 123 | 3.20e-13 | 68.9 |
| MS.gene21700.t1 | AT2G43560 | 38.261 | 115 | 62 | 4 | 392 | 500 | 106 | 217 | 3.50e-13 | 69.3 |
| MS.gene21700.t1 | AT2G43560 | 38.261 | 115 | 62 | 4 | 392 | 500 | 50 | 161 | 5.22e-13 | 67.4 |
Find 112 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCGAAGCATCCATCTTTC+TGG | 0.194721 | 5.2:+2555214 | MS.gene21700:CDS |
| CACAGACGACAATGGGATTC+TGG | 0.222021 | 5.2:+2553676 | None:intergenic |
| AGCTTCTCCTTCAGCCTCTT+TGG | 0.225392 | 5.2:-2557762 | None:intergenic |
| TTTCTTCAGGGATGAGGGTT+GGG | 0.234866 | 5.2:+2558389 | MS.gene21700:intron |
| AGCATTCTTCAGTGCGCTTC+TGG | 0.249781 | 5.2:+2555082 | MS.gene21700:CDS |
| ACTTACAATTCCACCATCTA+TGG | 0.251042 | 5.2:+2558423 | MS.gene21700:CDS |
| CAGCTTCCAGTTGTCATTAG+AGG | 0.251117 | 5.2:+2556464 | MS.gene21700:CDS |
| TCTGAATTTGATAGTGAAAA+TGG | 0.258524 | 5.2:+2555469 | MS.gene21700:CDS |
| CATACCAAGTCGAAACTTAA+AGG | 0.287309 | 5.2:-2558157 | None:intergenic |
| GACGACAATCAGCCTGAAAA+TGG | 0.313986 | 5.2:+2556368 | MS.gene21700:CDS |
| TTGGGAGAGGACGTGGGAAC+TGG | 0.337787 | 5.2:+2555433 | MS.gene21700:CDS |
| AAAATATTTGACTCGTGTAT+TGG | 0.338581 | 5.2:+2558126 | MS.gene21700:CDS |
| GGATAGGTTCTCACGTTAGA+TGG | 0.341955 | 5.2:-2557872 | None:intergenic |
| GGTTATAGAGGACATATCTA+TGG | 0.345544 | 5.2:+2557904 | MS.gene21700:CDS |
| AGCAAAGCAATCGAAGAAAA+AGG | 0.355166 | 5.2:+2556400 | MS.gene21700:CDS |
| AACCAGAAAGATGGATGCTT+CGG | 0.367662 | 5.2:-2555216 | None:intergenic |
| ACAATGCAAAAGTGATTCAT+TGG | 0.381195 | 5.2:+2555414 | MS.gene21700:intron |
| GGAGTATACCACAAAATTCA+TGG | 0.385779 | 5.2:+2558609 | MS.gene21700:CDS |
| TGCCCTTTGAATCTTAAGTT+TGG | 0.390870 | 5.2:+2555157 | MS.gene21700:CDS |
| GCTTTGTCTGAAGTGGAAAT+CGG | 0.394739 | 5.2:-2556530 | None:intergenic |
| ACAATTTCATACCCCATAGA+TGG | 0.396140 | 5.2:-2558436 | None:intergenic |
| GGATGACTTGGTGGCATTCT+CGG | 0.397658 | 5.2:+2555183 | MS.gene21700:CDS |
| GTTGAGTTGGTTGGCGTTGA+AGG | 0.403304 | 5.2:+2558644 | MS.gene21700:CDS |
| GGGTGGGATGTTGGCGTCAA+TGG | 0.405209 | 5.2:+2558281 | MS.gene21700:CDS |
| GGGCACGTCTCAACCTTGTT+TGG | 0.412493 | 5.2:-2555139 | None:intergenic |
| TCCTCTATAACCAATCCATT+TGG | 0.417967 | 5.2:-2557893 | None:intergenic |
| TTGCATGAGAGACATTGTTC+TGG | 0.419904 | 5.2:-2557555 | None:intergenic |
| TGAAAACCCTTACTCATCAT+TGG | 0.420043 | 5.2:-2557602 | None:intergenic |
| ACAGACGACAATGGGATTCT+GGG | 0.423758 | 5.2:+2553677 | None:intergenic |
| TCCACATCGTCAGTACTATA+CGG | 0.427484 | 5.2:-2553840 | None:intergenic |
| TCTCTCGTGTCATCGTCATC+TGG | 0.438302 | 5.2:-2555247 | None:intergenic |
| TTGTCACCTCTAATGACAAC+TGG | 0.439166 | 5.2:-2556470 | None:intergenic |
| AGATTTAGCTTTGTCTGAAG+TGG | 0.441957 | 5.2:-2556537 | None:intergenic |
| TTCTTCAGGGATGAGGGTTG+GGG | 0.443024 | 5.2:+2558390 | MS.gene21700:intron |
| GGTTCTCACGTTAGATGGCT+TGG | 0.444994 | 5.2:-2557867 | None:intergenic |
| CATGCAAAGGATGGAGATGA+TGG | 0.445035 | 5.2:+2557571 | MS.gene21700:CDS |
| TGATTCATTGGGAGAGGACG+TGG | 0.450717 | 5.2:+2555426 | MS.gene21700:CDS |
| GATGGCAAAAGAGCTGATCT+TGG | 0.455967 | 5.2:+2557935 | MS.gene21700:CDS |
| CAGGTCAGTGTTAGATATAC+CGG | 0.457744 | 5.2:+2558084 | MS.gene21700:intron |
| ATACCAAGTCGAAACTTAAA+GGG | 0.462033 | 5.2:-2558156 | None:intergenic |
| TCCAAATGGATTGGTTATAG+AGG | 0.465197 | 5.2:+2557892 | MS.gene21700:CDS |
| ACCAGAAAGATGGATGCTTC+GGG | 0.470599 | 5.2:-2555215 | None:intergenic |
| CTAAAATTTCAGGCTACTCT+AGG | 0.474162 | 5.2:+2555037 | MS.gene21700:intron |
| AGGTGACAATAAGTTTGTCT+TGG | 0.479792 | 5.2:+2556484 | MS.gene21700:CDS |
| ATATTTGATGTTGAGTTGGT+TGG | 0.480042 | 5.2:+2558635 | MS.gene21700:CDS |
| CTATACGGAACCGGATTGCC+AGG | 0.485280 | 5.2:-2553825 | None:intergenic |
| GCACAAAATAACCAGAAAGA+TGG | 0.487484 | 5.2:-2555225 | None:intergenic |
| CTTACAATTCCACCATCTAT+GGG | 0.490011 | 5.2:+2558424 | MS.gene21700:CDS |
| GTCATCAAGGGGTGGGATGT+TGG | 0.490964 | 5.2:+2558272 | MS.gene21700:CDS |
| GCTTATATTTGATGTTGAGT+TGG | 0.494265 | 5.2:+2558631 | MS.gene21700:CDS |
| AACGTGAGAACCTATCCAAA+TGG | 0.495137 | 5.2:+2557878 | MS.gene21700:CDS |
| AAGAGCTGATCTTGGAAAGA+AGG | 0.496054 | 5.2:+2557943 | MS.gene21700:CDS |
| CTTTGTCTGAAGTGGAAATC+GGG | 0.496076 | 5.2:-2556529 | None:intergenic |
| TTGGTGGCATTCTCGGTCAT+CGG | 0.496858 | 5.2:+2555190 | MS.gene21700:CDS |
| TGAAGTGAAACCTGGCAATC+CGG | 0.499808 | 5.2:+2553815 | MS.gene21700:CDS |
| TTAGATGGCTTGGCTTCAGT+TGG | 0.504936 | 5.2:-2557857 | None:intergenic |
| TCACCAAACTTAAGATTCAA+AGG | 0.507727 | 5.2:-2555160 | None:intergenic |
| CTCAACCTTGTTTGGCAGCA+AGG | 0.509715 | 5.2:-2555131 | None:intergenic |
| TGGGAGAGGACGTGGGAACT+GGG | 0.512185 | 5.2:+2555434 | MS.gene21700:CDS |
| AACTGGGAAATCCAAGAAGA+AGG | 0.515282 | 5.2:+2556610 | MS.gene21700:CDS |
| GTGTTCCTTGCTGCCAAACA+AGG | 0.525261 | 5.2:+2555126 | MS.gene21700:CDS |
| TTTCAGGCTACTCTAGGCGT+TGG | 0.525313 | 5.2:+2555043 | MS.gene21700:intron |
| TATAACCAATCCATTTGGAT+AGG | 0.528390 | 5.2:-2557888 | None:intergenic |
| ACAAAATACCTCCACTACTC+CGG | 0.530163 | 5.2:-2555549 | None:intergenic |
| CAATGCAAAAGTGATTCATT+GGG | 0.534185 | 5.2:+2555415 | MS.gene21700:intron |
| ATGAGAGACATTGTTCTGGT+TGG | 0.538743 | 5.2:-2557551 | None:intergenic |
| GCACCCTTTAAGTTTCGACT+TGG | 0.542842 | 5.2:+2558153 | MS.gene21700:CDS |
| GTTTGGTGAGGATGACTTGG+TGG | 0.548655 | 5.2:+2555174 | MS.gene21700:CDS |
| TGTACACATCTTCGCCAGTC+CGG | 0.549126 | 5.2:+2555530 | MS.gene21700:CDS |
| AAGGCTGAAACAGAAACAAA+AGG | 0.552836 | 5.2:+2556569 | MS.gene21700:CDS |
| TCGTCAGTACTATACGGAAC+CGG | 0.556211 | 5.2:-2553834 | None:intergenic |
| CACCAAACTTAAGATTCAAA+GGG | 0.556434 | 5.2:-2555159 | None:intergenic |
| GTTATAGAGGACATATCTAT+GGG | 0.558134 | 5.2:+2557905 | MS.gene21700:CDS |
| CAAAAGTGATTCATTGGGAG+AGG | 0.559260 | 5.2:+2555420 | MS.gene21700:intron |
| GAGAACCTATCCAAATGGAT+TGG | 0.560765 | 5.2:+2557883 | MS.gene21700:CDS |
| TCTTCGCCAGTCCGGAGTAG+TGG | 0.561425 | 5.2:+2555538 | MS.gene21700:CDS |
| TAAGTTTGGTGAGGATGACT+TGG | 0.562154 | 5.2:+2555171 | MS.gene21700:CDS |
| GGAGGAAAGTGCTCATGTAA+AGG | 0.563185 | 5.2:+2557477 | MS.gene21700:CDS |
| AGGATGAGCAGCTGCAAGAT+GGG | 0.567860 | 5.2:+2556687 | MS.gene21700:CDS |
| AGGTGTAGGACAAGTCATCA+AGG | 0.569087 | 5.2:+2558259 | MS.gene21700:intron |
| TCAGGGATTGAAGTGAAACC+TGG | 0.572044 | 5.2:+2553807 | MS.gene21700:intron |
| TTTGAATCTTAAGTTTGGTG+AGG | 0.577124 | 5.2:+2555162 | MS.gene21700:CDS |
| CAAGTTGAAAGATCATGGTA+AGG | 0.578952 | 5.2:+2557456 | MS.gene21700:CDS |
| AATGTCTCTCATGCAAAGGA+TGG | 0.579761 | 5.2:+2557562 | MS.gene21700:CDS |
| TTGGAAAGTGAAGATGAAGA+TGG | 0.586293 | 5.2:+2556503 | MS.gene21700:CDS |
| AGCTAAATCTGAGTCTCAGA+AGG | 0.587477 | 5.2:+2556550 | MS.gene21700:CDS |
| GATATGGTGACAAACGTGTT+GGG | 0.590168 | 5.2:+2558588 | MS.gene21700:intron |
| AGGAAAGCTTCACGTCACTC+AGG | 0.592401 | 5.2:+2553863 | MS.gene21700:CDS |
| ATATCTATGGGCAAACCAGA+TGG | 0.595038 | 5.2:+2557917 | MS.gene21700:CDS |
| GGTGTAGGACAAGTCATCAA+GGG | 0.596781 | 5.2:+2558260 | MS.gene21700:intron |
| GAGGATGAGCAGCTGCAAGA+TGG | 0.601018 | 5.2:+2556686 | MS.gene21700:CDS |
| GGACGTGGGAACTGGGTCAG+AGG | 0.603866 | 5.2:+2555441 | MS.gene21700:CDS |
| AGGACAAGTCATCAAGGGGT+GGG | 0.609520 | 5.2:+2558265 | MS.gene21700:CDS |
| ATACCTCCACTACTCCGGAC+TGG | 0.610928 | 5.2:-2555544 | None:intergenic |
| GAACAATGTCTCTCATGCAA+AGG | 0.611604 | 5.2:+2557558 | MS.gene21700:CDS |
| TAGGACAAGTCATCAAGGGG+TGG | 0.614183 | 5.2:+2558264 | MS.gene21700:CDS |
| TCGCCAGTCCGGAGTAGTGG+AGG | 0.614191 | 5.2:+2555541 | MS.gene21700:CDS |
| GTTGAAAGATCATGGTAAGG+AGG | 0.614660 | 5.2:+2557459 | MS.gene21700:CDS |
| ATGCAAAGGATGGAGATGAT+GGG | 0.616446 | 5.2:+2557572 | MS.gene21700:CDS |
| ATTTCATACCCCATAGATGG+TGG | 0.621077 | 5.2:-2558433 | None:intergenic |
| AGATATGGTGACAAACGTGT+TGG | 0.627092 | 5.2:+2558587 | MS.gene21700:intron |
| TCCGTATAGTACTGACGATG+TGG | 0.632230 | 5.2:+2553839 | MS.gene21700:CDS |
| TCTAGGCGTTGGTCCATCGA+CGG | 0.649382 | 5.2:+2555054 | MS.gene21700:CDS |
| TATAGTACTGACGATGTGGA+AGG | 0.650155 | 5.2:+2553843 | MS.gene21700:CDS |
| AAAAGTTCAAGCTGTCGATG+AGG | 0.663434 | 5.2:+2556667 | MS.gene21700:CDS |
| GTGTAGGACAAGTCATCAAG+GGG | 0.668593 | 5.2:+2558261 | MS.gene21700:CDS |
| GCCAGATGAAAAGTCTGAGG+AGG | 0.674614 | 5.2:+2557516 | MS.gene21700:CDS |
| TGTGCCAGATGAAAAGTCTG+AGG | 0.679651 | 5.2:+2557513 | MS.gene21700:CDS |
| CAGACGACAATGGGATTCTG+GGG | 0.681011 | 5.2:+2553678 | None:intergenic |
| GATTCATTGGGAGAGGACGT+GGG | 0.690481 | 5.2:+2555427 | MS.gene21700:CDS |
| TTACAATTCCACCATCTATG+GGG | 0.701878 | 5.2:+2558425 | MS.gene21700:CDS |
| GCTCACTTGAGAGAGAAACC+CGG | 0.729353 | 5.2:+2556431 | MS.gene21700:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATATTTATTTATGAATC+CGG | - | chr5.2:2555727-2555746 | None:intergenic | 10.0% |
| !! | ATGATAAATAATTATAATCT+AGG | + | chr5.2:2554126-2554145 | MS.gene21700:intron | 10.0% |
| !! | TTATAATTATTTATCATCTA+AGG | - | chr5.2:2554123-2554142 | None:intergenic | 10.0% |
| !! | ACGTTAACTAAAATATTATA+GGG | + | chr5.2:2555776-2555795 | MS.gene21700:intron | 15.0% |
| !! | CAAATAAATGCATATTATAT+AGG | - | chr5.2:2554904-2554923 | None:intergenic | 15.0% |
| !! | CAATTATTATTTATCATCTA+AGG | - | chr5.2:2554234-2554253 | None:intergenic | 15.0% |
| !! | TAATTACTAAACACTTTAAT+AGG | - | chr5.2:2555878-2555897 | None:intergenic | 15.0% |
| !!! | ATTTATCTTTTATTTTCTTC+AGG | + | chr5.2:2558376-2558395 | MS.gene21700:intron | 15.0% |
| !!! | CAATTTTTAAAAAACAGATT+TGG | - | chr5.2:2557300-2557319 | None:intergenic | 15.0% |
| !!! | TTAAATTTTAAAAATGTTCC+TGG | - | chr5.2:2555911-2555930 | None:intergenic | 15.0% |
| !!! | TTTATCTTTTATTTTCTTCA+GGG | + | chr5.2:2558377-2558396 | MS.gene21700:intron | 15.0% |
| !!! | TTTGAAAATTCAAAAACTTT+TGG | + | chr5.2:2556869-2556888 | MS.gene21700:intron | 15.0% |
| !! | AAACAGAAATAAGTGATTAA+CGG | - | chr5.2:2553729-2553748 | None:intergenic | 20.0% |
| !! | AAAGAAAACTGAAAAATACA+AGG | + | chr5.2:2556219-2556238 | MS.gene21700:intron | 20.0% |
| !! | AAGAAACTGGATTATAAAAT+AGG | - | chr5.2:2558038-2558057 | None:intergenic | 20.0% |
| !! | AATAAATAATCCAGATACTT+TGG | + | chr5.2:2556802-2556821 | MS.gene21700:intron | 20.0% |
| !! | AATCTTATTACGTTATTACT+AGG | - | chr5.2:2558321-2558340 | None:intergenic | 20.0% |
| !! | AATTGAAGTATATGCATTAT+TGG | + | chr5.2:2554254-2554273 | MS.gene21700:intron | 20.0% |
| !! | ACAACAAAATTATCACAAAA+AGG | - | chr5.2:2554462-2554481 | None:intergenic | 20.0% |
| !! | ATAAATAATCCAGATACTTT+GGG | + | chr5.2:2556803-2556822 | MS.gene21700:intron | 20.0% |
| !! | CAAACGATAAATATAGATAA+AGG | - | chr5.2:2558238-2558257 | None:intergenic | 20.0% |
| !! | CAATATTGTACATTTCTAAA+TGG | - | chr5.2:2557186-2557205 | None:intergenic | 20.0% |
| !! | CACGTTAACTAAAATATTAT+AGG | + | chr5.2:2555775-2555794 | MS.gene21700:intron | 20.0% |
| !! | CGTTAACTAAAATATTATAG+GGG | + | chr5.2:2555777-2555796 | MS.gene21700:intron | 20.0% |
| !! | GAATTAAAAGACAAACTATT+TGG | - | chr5.2:2557272-2557291 | None:intergenic | 20.0% |
| !!! | AAAATTCAAAAACTTTTGCT+AGG | + | chr5.2:2556873-2556892 | MS.gene21700:intron | 20.0% |
| !!! | AAAATTCAAAAACTTTTGGT+AGG | + | chr5.2:2557022-2557041 | MS.gene21700:intron | 20.0% |
| !!! | AGTAATTAATTTAGTTTTCC+AGG | + | chr5.2:2555890-2555909 | MS.gene21700:intron | 20.0% |
| !!! | GATGTTTTTACTGTTTATTA+GGG | + | chr5.2:2553992-2554011 | MS.gene21700:intron | 20.0% |
| !!! | TAACAAATCATTTTTATCAG+CGG | - | chr5.2:2554831-2554850 | None:intergenic | 20.0% |
| !!! | TGATAATTTTGTTGTTGAAT+TGG | + | chr5.2:2554467-2554486 | MS.gene21700:intron | 20.0% |
| !!! | TGATGTTTTTACTGTTTATT+AGG | + | chr5.2:2553991-2554010 | MS.gene21700:intron | 20.0% |
| !!! | TTTGGTACATTTTTCATTAA+TGG | + | chr5.2:2557142-2557161 | MS.gene21700:intron | 20.0% |
| ! | AAATCATATTGGACTTCAAA+AGG | - | chr5.2:2554977-2554996 | None:intergenic | 25.0% |
| ! | AACAAGCTCAAAAAAAAACT+GGG | + | chr5.2:2556594-2556613 | MS.gene21700:CDS | 25.0% |
| ! | AAGTCAATAACTAAAAACCA+AGG | - | chr5.2:2554787-2554806 | None:intergenic | 25.0% |
| ! | ACAAAAGCTAGTTATTCAAA+AGG | - | chr5.2:2555289-2555308 | None:intergenic | 25.0% |
| ! | ACGTTTCTGATAATAATTTC+AGG | + | chr5.2:2557413-2557432 | MS.gene21700:intron | 25.0% |
| ! | ATCCCATTTAACAAAGAATA+TGG | - | chr5.2:2558525-2558544 | None:intergenic | 25.0% |
| ! | ATGAAAACTTGAAACAAACA+TGG | + | chr5.2:2556080-2556099 | MS.gene21700:intron | 25.0% |
| ! | ATGCCATATTCTTTGTTAAA+TGG | + | chr5.2:2558519-2558538 | MS.gene21700:intron | 25.0% |
| ! | GAATGAATGTGTTGAATTTA+TGG | - | chr5.2:2554408-2554427 | None:intergenic | 25.0% |
| ! | GTATATCCATGTAATTCTAT+AGG | - | chr5.2:2554302-2554321 | None:intergenic | 25.0% |
| ! | TAAATTCAACACATTCATTC+TGG | + | chr5.2:2554408-2554427 | MS.gene21700:intron | 25.0% |
| ! | TATCTATATTTATCGTTTGC+AGG | + | chr5.2:2558239-2558258 | MS.gene21700:intron | 25.0% |
| ! | TCGTAACCATAAAATCATAT+TGG | - | chr5.2:2554988-2555007 | None:intergenic | 25.0% |
| ! | TGAAAACTTGAAACAAACAT+GGG | + | chr5.2:2556081-2556100 | MS.gene21700:intron | 25.0% |
| ! | TGATAAGCTCAAATACAAAA+CGG | - | chr5.2:2553790-2553809 | None:intergenic | 25.0% |
| ! | TGCCATATTCTTTGTTAAAT+GGG | + | chr5.2:2558520-2558539 | MS.gene21700:intron | 25.0% |
| ! | TGGAAAAAACATCATGTTAT+TGG | - | chr5.2:2555667-2555686 | None:intergenic | 25.0% |
| ! | TTAATAGGATTAAGATTCCT+AGG | - | chr5.2:2555863-2555882 | None:intergenic | 25.0% |
| ! | TTATATGTATGAGCATTTGA+TGG | - | chr5.2:2555599-2555618 | None:intergenic | 25.0% |
| ! | TTATTCCCATGTTAAAGTAT+GGG | - | chr5.2:2556025-2556044 | None:intergenic | 25.0% |
| ! | TTTAACATGGGAATAAAAAG+TGG | + | chr5.2:2556029-2556048 | MS.gene21700:intron | 25.0% |
| ! | TTTATTCCCATGTTAAAGTA+TGG | - | chr5.2:2556026-2556045 | None:intergenic | 25.0% |
| ! | TTTCTATTCCTAAATCAAAC+AGG | - | chr5.2:2556775-2556794 | None:intergenic | 25.0% |
| !! | AAAAACAAGTTGAAAGATCA+TGG | + | chr5.2:2557451-2557470 | MS.gene21700:CDS | 25.0% |
| !! | AAAACTGAAACAGATTTTAG+TGG | + | chr5.2:2557103-2557122 | MS.gene21700:intron | 25.0% |
| !! | AAAATATTTGACTCGTGTAT+TGG | + | chr5.2:2558126-2558145 | MS.gene21700:CDS | 25.0% |
| !! | AATAATTTCACGACTTTTCT+TGG | + | chr5.2:2554524-2554543 | MS.gene21700:intron | 25.0% |
| !! | AATATAAGCCATGAATTTTG+TGG | - | chr5.2:2558620-2558639 | None:intergenic | 25.0% |
| !! | AGTTTTCATAAATTATGCCT+AGG | - | chr5.2:2556069-2556088 | None:intergenic | 25.0% |
| !! | TAACTTTTTAATAATCCACG+TGG | + | chr5.2:2556719-2556738 | MS.gene21700:intron | 25.0% |
| !! | TGAAGTCCAATATGATTTTA+TGG | + | chr5.2:2554979-2554998 | MS.gene21700:intron | 25.0% |
| !! | TTTTGTATTTGAGCTTATCA+GGG | + | chr5.2:2553790-2553809 | MS.gene21700:intron | 25.0% |
| !!! | AAACAGTTTTTCAGATACTT+TGG | + | chr5.2:2556748-2556767 | MS.gene21700:intron | 25.0% |
| !!! | AAACTGAAACAGATTTTAGT+GGG | + | chr5.2:2557104-2557123 | MS.gene21700:intron | 25.0% |
| !!! | AACAGTTTTTCAGATACTTT+GGG | + | chr5.2:2556749-2556768 | MS.gene21700:intron | 25.0% |
| !!! | GATGTTTTTTCCAGTAAATT+TGG | + | chr5.2:2555674-2555693 | MS.gene21700:intron | 25.0% |
| !!! | TAAGAGTTTATGGTGTTTTT+TGG | + | chr5.2:2557692-2557711 | MS.gene21700:intron | 25.0% |
| !!! | TCTGAATTTGATAGTGAAAA+TGG | + | chr5.2:2555469-2555488 | MS.gene21700:CDS | 25.0% |
| !!! | TTTGAATAACTAGCTTTTGT+TGG | + | chr5.2:2555289-2555308 | MS.gene21700:intron | 25.0% |
| !!! | TTTTGAGAACTAAATCAAAC+AGG | - | chr5.2:2556829-2556848 | None:intergenic | 25.0% |
| AAAAAATAAGCCCATCCAAA+TGG | + | chr5.2:2554760-2554779 | MS.gene21700:intron | 30.0% | |
| AAAAATAAGCCCATCCAAAT+GGG | + | chr5.2:2554761-2554780 | MS.gene21700:intron | 30.0% | |
| AAACTATCCAATGATGAGTA+AGG | + | chr5.2:2557595-2557614 | MS.gene21700:intron | 30.0% | |
| AAAGAAGAAAAAGACCAAAG+AGG | + | chr5.2:2557748-2557767 | MS.gene21700:CDS | 30.0% | |
| AAAGAATATGGCATCTAACA+CGG | - | chr5.2:2558513-2558532 | None:intergenic | 30.0% | |
| AAATCACACCAAAGACATAT+TGG | - | chr5.2:2558462-2558481 | None:intergenic | 30.0% | |
| AACCATTCGTTGTATAATCT+AGG | + | chr5.2:2554020-2554039 | MS.gene21700:intron | 30.0% | |
| AACCTAGATTATACAACGAA+TGG | - | chr5.2:2554025-2554044 | None:intergenic | 30.0% | |
| AACTATCCAATGATGAGTAA+GGG | + | chr5.2:2557596-2557615 | MS.gene21700:intron | 30.0% | |
| AAGAGTTAAAATAGTGTGAG+TGG | + | chr5.2:2555954-2555973 | MS.gene21700:intron | 30.0% | |
| AAGATTCCCATACTTTAACA+TGG | + | chr5.2:2556016-2556035 | MS.gene21700:intron | 30.0% | |
| AAGGATTAAATTTACAGTCC+TGG | + | chr5.2:2555812-2555831 | MS.gene21700:intron | 30.0% | |
| ACAATGCAAAAGTGATTCAT+TGG | + | chr5.2:2555414-2555433 | MS.gene21700:intron | 30.0% | |
| ACTTCAAATTCAAAAGCAGA+TGG | - | chr5.2:2553924-2553943 | None:intergenic | 30.0% | |
| AGAAGAATACAAAACAGAGA+AGG | - | chr5.2:2557647-2557666 | None:intergenic | 30.0% | |
| AGAGTTAAAATAGTGTGAGT+GGG | + | chr5.2:2555955-2555974 | MS.gene21700:intron | 30.0% | |
| AGATTCCCATACTTTAACAT+GGG | + | chr5.2:2556017-2556036 | MS.gene21700:intron | 30.0% | |
| AGGATTAAATTTACAGTCCT+GGG | + | chr5.2:2555813-2555832 | MS.gene21700:intron | 30.0% | |
| ATAATCCAGTTTCTTCTGAT+AGG | + | chr5.2:2558043-2558062 | MS.gene21700:intron | 30.0% | |
| ATACCAAGTCGAAACTTAAA+GGG | - | chr5.2:2558159-2558178 | None:intergenic | 30.0% | |
| ATGCATTTATTTGCTTGCAT+TGG | + | chr5.2:2554911-2554930 | MS.gene21700:intron | 30.0% | |
| CAATGCAAAAGTGATTCATT+GGG | + | chr5.2:2555415-2555434 | MS.gene21700:intron | 30.0% | |
| CACCAAACTTAAGATTCAAA+GGG | - | chr5.2:2555162-2555181 | None:intergenic | 30.0% | |
| CCAACACAAATATAGACAAA+GGG | - | chr5.2:2557373-2557392 | None:intergenic | 30.0% | |
| GAAATTGTCCAATATGTCTT+TGG | + | chr5.2:2558451-2558470 | MS.gene21700:intron | 30.0% | |
| GAACAAGCTCAAAAAAAAAC+TGG | + | chr5.2:2556593-2556612 | MS.gene21700:CDS | 30.0% | |
| GAAGAATACAAAACAGAGAA+GGG | - | chr5.2:2557646-2557665 | None:intergenic | 30.0% | |
| GCTTATATTTGATGTTGAGT+TGG | + | chr5.2:2558631-2558650 | MS.gene21700:CDS | 30.0% | |
| GGTCAAACAAAATTACACAT+TGG | - | chr5.2:2558017-2558036 | None:intergenic | 30.0% | |
| GTTATAGAGGACATATCTAT+GGG | + | chr5.2:2557905-2557924 | MS.gene21700:CDS | 30.0% | |
| TAGTATTTGCTTTGCTTTGT+TGG | + | chr5.2:2554856-2554875 | MS.gene21700:intron | 30.0% | |
| TATAACCAATCCATTTGGAT+AGG | - | chr5.2:2557891-2557910 | None:intergenic | 30.0% | |
| TCACCAAACTTAAGATTCAA+AGG | - | chr5.2:2555163-2555182 | None:intergenic | 30.0% | |
| TCCAACACAAATATAGACAA+AGG | - | chr5.2:2557374-2557393 | None:intergenic | 30.0% | |
| TGCATTCCTATAGAATTACA+TGG | + | chr5.2:2554293-2554312 | MS.gene21700:intron | 30.0% | |
| TTAAATGGGATGACTTTGAT+TGG | + | chr5.2:2558534-2558553 | MS.gene21700:intron | 30.0% | |
| ! | GAAATCCTTGTTTGATATTC+AGG | + | chr5.2:2558065-2558084 | MS.gene21700:intron | 30.0% |
| ! | GTTTTGTATTTGAGCTTATC+AGG | + | chr5.2:2553789-2553808 | MS.gene21700:intron | 30.0% |
| ! | TTTGAATCTTAAGTTTGGTG+AGG | + | chr5.2:2555162-2555181 | MS.gene21700:CDS | 30.0% |
| !! | ATATTTGATGTTGAGTTGGT+TGG | + | chr5.2:2558635-2558654 | MS.gene21700:CDS | 30.0% |
| !! | TTGTTGTTGAATTGGTTTGA+TGG | + | chr5.2:2554475-2554494 | MS.gene21700:intron | 30.0% |
| !! | TTTATTTTCTTCAGGGATGA+GGG | + | chr5.2:2558384-2558403 | MS.gene21700:intron | 30.0% |
| !!! | AGCTTTGTTTTCATTGAATC+TGG | + | chr5.2:2553957-2553976 | MS.gene21700:intron | 30.0% |
| !!! | CACTTCCAATTTTGTTTTCA+CGG | - | chr5.2:2557211-2557230 | None:intergenic | 30.0% |
| !!! | TGGGCTTATTTTTTAGCTTA+TGG | - | chr5.2:2554754-2554773 | None:intergenic | 30.0% |
| !!! | TTTTATTTTCTTCAGGGATG+AGG | + | chr5.2:2558383-2558402 | MS.gene21700:intron | 30.0% |
| AAAAATGATTCGTGCACGTT+TGG | + | chr5.2:2554568-2554587 | MS.gene21700:intron | 35.0% | |
| AAATTTGGTCCAGAATGATC+TGG | + | chr5.2:2555689-2555708 | MS.gene21700:intron | 35.0% | |
| AAGAATATGGCATCTAACAC+GGG | - | chr5.2:2558512-2558531 | None:intergenic | 35.0% | |
| AAGGCTGAAACAGAAACAAA+AGG | + | chr5.2:2556569-2556588 | MS.gene21700:CDS | 35.0% | |
| AATTATTACAATCACAGCCC+AGG | - | chr5.2:2554511-2554530 | None:intergenic | 35.0% | |
| AATTTGGTCCAGAATGATCT+GGG | + | chr5.2:2555690-2555709 | MS.gene21700:intron | 35.0% | |
| ACAATTTCATACCCCATAGA+TGG | - | chr5.2:2558439-2558458 | None:intergenic | 35.0% | |
| ACTGACCTGAATATCAAACA+AGG | - | chr5.2:2558073-2558092 | None:intergenic | 35.0% | |
| ACTTACAATTCCACCATCTA+TGG | + | chr5.2:2558423-2558442 | MS.gene21700:CDS | 35.0% | |
| AGCAAAGCAATCGAAGAAAA+AGG | + | chr5.2:2556400-2556419 | MS.gene21700:CDS | 35.0% | |
| AGCAAGGAACACAAAAAAAC+TGG | - | chr5.2:2555118-2555137 | None:intergenic | 35.0% | |
| AGGTGACAATAAGTTTGTCT+TGG | + | chr5.2:2556484-2556503 | MS.gene21700:CDS | 35.0% | |
| ATACTTGAAATGACACTCGA+GGG | + | chr5.2:2554318-2554337 | MS.gene21700:intron | 35.0% | |
| ATGAGTGGGAGTAAACAATA+AGG | - | chr5.2:2556179-2556198 | None:intergenic | 35.0% | |
| ATTCCTAGGAATAATGTTCC+AGG | - | chr5.2:2555849-2555868 | None:intergenic | 35.0% | |
| CATACCAAGTCGAAACTTAA+AGG | - | chr5.2:2558160-2558179 | None:intergenic | 35.0% | |
| CATTCCTGATGCATGAAAAT+AGG | + | chr5.2:2556196-2556215 | MS.gene21700:intron | 35.0% | |
| CCCTTTGTCTATATTTGTGT+TGG | + | chr5.2:2557370-2557389 | MS.gene21700:intron | 35.0% | |
| CTAAAATTTCAGGCTACTCT+AGG | + | chr5.2:2555037-2555056 | MS.gene21700:intron | 35.0% | |
| CTTACAATTCCACCATCTAT+GGG | + | chr5.2:2558424-2558443 | MS.gene21700:CDS | 35.0% | |
| GATTTCCTATCAGAAGAAAC+TGG | - | chr5.2:2558051-2558070 | None:intergenic | 35.0% | |
| GCACAAAATAACCAGAAAGA+TGG | - | chr5.2:2555228-2555247 | None:intergenic | 35.0% | |
| GGAGTATACCACAAAATTCA+TGG | + | chr5.2:2558609-2558628 | MS.gene21700:CDS | 35.0% | |
| GGATTGCAGAATGTAACATT+GGG | - | chr5.2:2556118-2556137 | None:intergenic | 35.0% | |
| GGGTATACCGATAAAACTTA+GGG | - | chr5.2:2556155-2556174 | None:intergenic | 35.0% | |
| GGTATACCGATAAAACTTAG+GGG | - | chr5.2:2556154-2556173 | None:intergenic | 35.0% | |
| GGTTATAGAGGACATATCTA+TGG | + | chr5.2:2557904-2557923 | MS.gene21700:CDS | 35.0% | |
| GTATACCGATAAAACTTAGG+GGG | - | chr5.2:2556153-2556172 | None:intergenic | 35.0% | |
| TAAAGCTGTTGTAGAGATGT+TGG | - | chr5.2:2557236-2557255 | None:intergenic | 35.0% | |
| TATACTTGAAATGACACTCG+AGG | + | chr5.2:2554317-2554336 | MS.gene21700:intron | 35.0% | |
| TATTTATCGTTTGCAGGTGT+AGG | + | chr5.2:2558245-2558264 | MS.gene21700:intron | 35.0% | |
| TCACGACTTCAAAAAAGGTA+AGG | - | chr5.2:2556334-2556353 | None:intergenic | 35.0% | |
| TCATTCTGGACCAAATTTAC+TGG | - | chr5.2:2555687-2555706 | None:intergenic | 35.0% | |
| TCCTCTATAACCAATCCATT+TGG | - | chr5.2:2557896-2557915 | None:intergenic | 35.0% | |
| TGAAAACCCTTACTCATCAT+TGG | - | chr5.2:2557605-2557624 | None:intergenic | 35.0% | |
| TGCCCTTTGAATCTTAAGTT+TGG | + | chr5.2:2555157-2555176 | MS.gene21700:CDS | 35.0% | |
| TGGATTGCAGAATGTAACAT+TGG | - | chr5.2:2556119-2556138 | None:intergenic | 35.0% | |
| TGGGTATACCGATAAAACTT+AGG | - | chr5.2:2556156-2556175 | None:intergenic | 35.0% | |
| TGTTCGTTGTTATGCAGATA+TGG | + | chr5.2:2558572-2558591 | MS.gene21700:intron | 35.0% | |
| TTACAATTCCACCATCTATG+GGG | + | chr5.2:2558425-2558444 | MS.gene21700:CDS | 35.0% | |
| TTCCCAAAACTGATGAATAG+AGG | - | chr5.2:2556930-2556949 | None:intergenic | 35.0% | |
| TTCCTAGGAATAATGTTCCA+GGG | - | chr5.2:2555848-2555867 | None:intergenic | 35.0% | |
| TTGCTCCGTGAAAACAAAAT+TGG | + | chr5.2:2557203-2557222 | MS.gene21700:intron | 35.0% | |
| TTGGAAAGTGAAGATGAAGA+TGG | + | chr5.2:2556503-2556522 | MS.gene21700:CDS | 35.0% | |
| TTTATTCCCATGGGAATAAG+AGG | - | chr5.2:2555997-2556016 | None:intergenic | 35.0% | |
| ! | AACATCTTTTGCCTTCTTCT+TGG | - | chr5.2:2556624-2556643 | None:intergenic | 35.0% |
| ! | ACTCCTCTATTCATCAGTTT+TGG | + | chr5.2:2556924-2556943 | MS.gene21700:intron | 35.0% |
| ! | AGAGTAGCCTGAAATTTTAG+AGG | - | chr5.2:2555037-2555056 | None:intergenic | 35.0% |
| ! | ATGGGAATCTTTTATTCCCA+TGG | - | chr5.2:2556007-2556026 | None:intergenic | 35.0% |
| ! | CAAGTTGAAAGATCATGGTA+AGG | + | chr5.2:2557456-2557475 | MS.gene21700:CDS | 35.0% |
| ! | CTCCTCTATTCATCAGTTTT+GGG | + | chr5.2:2556925-2556944 | MS.gene21700:intron | 35.0% |
| ! | CTTTCCTATTTTCATGCATC+AGG | - | chr5.2:2556203-2556222 | None:intergenic | 35.0% |
| ! | TGGGAATCTTTTATTCCCAT+GGG | - | chr5.2:2556006-2556025 | None:intergenic | 35.0% |
| ! | TGTCTGGAGTTTGGTTAATT+GGG | + | chr5.2:2554943-2554962 | MS.gene21700:intron | 35.0% |
| ! | TTTTTCTTCGATTGCTTTGC+TGG | - | chr5.2:2556401-2556420 | None:intergenic | 35.0% |
| !! | AAACACCCCCTAAGTTTTAT+CGG | + | chr5.2:2556145-2556164 | MS.gene21700:intron | 35.0% |
| !! | AGATTTAGCTTTGTCTGAAG+TGG | - | chr5.2:2556540-2556559 | None:intergenic | 35.0% |
| !! | GAATTGGTTTGATGGTTACT+TGG | + | chr5.2:2554483-2554502 | MS.gene21700:intron | 35.0% |
| !! | TAGCCTGAAATTTTAGAGGA+CGG | - | chr5.2:2555033-2555052 | None:intergenic | 35.0% |
| !! | TCCAAATGGATTGGTTATAG+AGG | + | chr5.2:2557892-2557911 | MS.gene21700:CDS | 35.0% |
| !!! | AAACTGTTTTTGAATCCACG+TGG | - | chr5.2:2556737-2556756 | None:intergenic | 35.0% |
| !!! | CTTTTTTGACGATAGCGATA+TGG | + | chr5.2:2555504-2555523 | MS.gene21700:CDS | 35.0% |
| !!! | GAAACAGATTTTAGTGGGTT+TGG | + | chr5.2:2557109-2557128 | MS.gene21700:intron | 35.0% |
| !!! | GGGTTTGGTTTTCAGTTTTT+TGG | + | chr5.2:2557124-2557143 | MS.gene21700:intron | 35.0% |
| !!! | TCTTGTTTTTCTTCTCAACG+AGG | - | chr5.2:2557724-2557743 | None:intergenic | 35.0% |
| AAAAAGACCAAAGAGGCTGA+AGG | + | chr5.2:2557755-2557774 | MS.gene21700:CDS | 40.0% | |
| AAAAGTTCAAGCTGTCGATG+AGG | + | chr5.2:2556667-2556686 | MS.gene21700:CDS | 40.0% | |
| AACCAGAAAGATGGATGCTT+CGG | - | chr5.2:2555219-2555238 | None:intergenic | 40.0% | |
| AACGTGAGAACCTATCCAAA+TGG | + | chr5.2:2557878-2557897 | MS.gene21700:CDS | 40.0% | |
| AACTGGGAAATCCAAGAAGA+AGG | + | chr5.2:2556610-2556629 | MS.gene21700:CDS | 40.0% | |
| AAGAGCTGATCTTGGAAAGA+AGG | + | chr5.2:2557943-2557962 | MS.gene21700:CDS | 40.0% | |
| AATGTCTCTCATGCAAAGGA+TGG | + | chr5.2:2557562-2557581 | MS.gene21700:CDS | 40.0% | |
| ACAAAATACCTCCACTACTC+CGG | - | chr5.2:2555552-2555571 | None:intergenic | 40.0% | |
| ACTAAAAACCAAGGCCCATT+TGG | - | chr5.2:2554778-2554797 | None:intergenic | 40.0% | |
| AGATATGGTGACAAACGTGT+TGG | + | chr5.2:2558587-2558606 | MS.gene21700:intron | 40.0% | |
| AGCTAAATCTGAGTCTCAGA+AGG | + | chr5.2:2556550-2556569 | MS.gene21700:CDS | 40.0% | |
| AGTGGGAGTAAACAATAAGG+TGG | - | chr5.2:2556176-2556195 | None:intergenic | 40.0% | |
| ATATCTATGGGCAAACCAGA+TGG | + | chr5.2:2557917-2557936 | MS.gene21700:CDS | 40.0% | |
| ATGAGAGACATTGTTCTGGT+TGG | - | chr5.2:2557554-2557573 | None:intergenic | 40.0% | |
| ATGCAAAGGATGGAGATGAT+GGG | + | chr5.2:2557572-2557591 | MS.gene21700:CDS | 40.0% | |
| ATTTCATACCCCATAGATGG+TGG | - | chr5.2:2558436-2558455 | None:intergenic | 40.0% | |
| CAAAAGTGATTCATTGGGAG+AGG | + | chr5.2:2555420-2555439 | MS.gene21700:intron | 40.0% | |
| CAGGTCAGTGTTAGATATAC+CGG | + | chr5.2:2558084-2558103 | MS.gene21700:intron | 40.0% | |
| CTCGATCACGACTTCAAAAA+AGG | - | chr5.2:2556339-2556358 | None:intergenic | 40.0% | |
| GAACAATGTCTCTCATGCAA+AGG | + | chr5.2:2557558-2557577 | MS.gene21700:CDS | 40.0% | |
| GAGAACCTATCCAAATGGAT+TGG | + | chr5.2:2557883-2557902 | MS.gene21700:CDS | 40.0% | |
| GATATGGTGACAAACGTGTT+GGG | + | chr5.2:2558588-2558607 | MS.gene21700:intron | 40.0% | |
| GTGGGAGTAAACAATAAGGT+GGG | - | chr5.2:2556175-2556194 | None:intergenic | 40.0% | |
| GTTGAAAGATCATGGTAAGG+AGG | + | chr5.2:2557459-2557478 | MS.gene21700:CDS | 40.0% | |
| TACTTGAAATGACACTCGAG+GGG | + | chr5.2:2554319-2554338 | MS.gene21700:intron | 40.0% | |
| TAGTGTGAGTGGGAAGTTAT+AGG | + | chr5.2:2555965-2555984 | MS.gene21700:intron | 40.0% | |
| TCCACATCGTCAGTACTATA+CGG | - | chr5.2:2553843-2553862 | None:intergenic | 40.0% | |
| TGAAACAAACATGGGAACGT+AGG | + | chr5.2:2556089-2556108 | MS.gene21700:intron | 40.0% | |
| TGGAAAAGTCATGTGTACCT+AGG | + | chr5.2:2556049-2556068 | MS.gene21700:intron | 40.0% | |
| TGGTTACCTCTTATTCCCAT+GGG | + | chr5.2:2555988-2556007 | MS.gene21700:intron | 40.0% | |
| TGTACATTCCTTCTGCACAA+GGG | + | chr5.2:2554062-2554081 | MS.gene21700:intron | 40.0% | |
| TTCATGCATCAGGAATGAGT+GGG | - | chr5.2:2556193-2556212 | None:intergenic | 40.0% | |
| TTCCCTGGAACATTATTCCT+AGG | + | chr5.2:2555843-2555862 | MS.gene21700:intron | 40.0% | |
| TTGCATGAGAGACATTGTTC+TGG | - | chr5.2:2557558-2557577 | None:intergenic | 40.0% | |
| TTGTACATTCCTTCTGCACA+AGG | + | chr5.2:2554061-2554080 | MS.gene21700:intron | 40.0% | |
| TTGTCACCTCTAATGACAAC+TGG | - | chr5.2:2556473-2556492 | None:intergenic | 40.0% | |
| TTTCATGCATCAGGAATGAG+TGG | - | chr5.2:2556194-2556213 | None:intergenic | 40.0% | |
| ! | ACTTTGGGCCTGTTTGATTT+AGG | + | chr5.2:2556764-2556783 | MS.gene21700:intron | 40.0% |
| ! | ATAGGGGTGTGTTTGTTTCA+AGG | + | chr5.2:2555793-2555812 | MS.gene21700:intron | 40.0% |
| ! | CTTTGTCTGAAGTGGAAATC+GGG | - | chr5.2:2556532-2556551 | None:intergenic | 40.0% |
| ! | GCTGGATTATCTCCATTTTC+AGG | - | chr5.2:2556383-2556402 | None:intergenic | 40.0% |
| ! | GCTTTGTCTGAAGTGGAAAT+CGG | - | chr5.2:2556533-2556552 | None:intergenic | 40.0% |
| ! | GTGTCTGGAGTTTGGTTAAT+TGG | + | chr5.2:2554942-2554961 | MS.gene21700:intron | 40.0% |
| ! | TAAGTTTGGTGAGGATGACT+TGG | + | chr5.2:2555171-2555190 | MS.gene21700:CDS | 40.0% |
| !! | AGCCTGAAATTTTAGAGGAC+GGG | - | chr5.2:2555032-2555051 | None:intergenic | 40.0% |
| !! | ATTTTCAGGCTGATTGTCGT+CGG | - | chr5.2:2556369-2556388 | None:intergenic | 40.0% |
| !! | TATAGTACTGACGATGTGGA+AGG | + | chr5.2:2553843-2553862 | MS.gene21700:CDS | 40.0% |
| !! | TTCCCGTCCTCTAAAATTTC+AGG | + | chr5.2:2555027-2555046 | MS.gene21700:intron | 40.0% |
| !!! | CTTAGGGGGTGTTTGTTTTA+TGG | - | chr5.2:2556139-2556158 | None:intergenic | 40.0% |
| !!! | CTTTTTTGAAGTCGTGATCG+AGG | + | chr5.2:2556337-2556356 | MS.gene21700:intron | 40.0% |
| AAAACCAAGGCCCATTTGGA+TGG | - | chr5.2:2554774-2554793 | None:intergenic | 45.0% | |
| AAACCAAGGCCCATTTGGAT+GGG | - | chr5.2:2554773-2554792 | None:intergenic | 45.0% | |
| ACCAGAAAGATGGATGCTTC+GGG | - | chr5.2:2555218-2555237 | None:intergenic | 45.0% | |
| ACCGGCAAGCTACAAAAAGA+TGG | + | chr5.2:2558102-2558121 | MS.gene21700:CDS | 45.0% | |
| AGCGGATGTATGCTAGATGA+AGG | - | chr5.2:2554813-2554832 | None:intergenic | 45.0% | |
| AGGTGTAGGACAAGTCATCA+AGG | + | chr5.2:2558259-2558278 | MS.gene21700:intron | 45.0% | |
| CAGCTTCCAGTTGTCATTAG+AGG | + | chr5.2:2556464-2556483 | MS.gene21700:CDS | 45.0% | |
| CATGCAAAGGATGGAGATGA+TGG | + | chr5.2:2557571-2557590 | MS.gene21700:CDS | 45.0% | |
| CCGGCAAGCTACAAAAAGAT+GGG | + | chr5.2:2558103-2558122 | MS.gene21700:CDS | 45.0% | |
| CTTCACGTCACTCAGGTTAT+TGG | + | chr5.2:2553870-2553889 | MS.gene21700:intron | 45.0% | |
| GACACTTCTGATTGAAGGTG+CGG | - | chr5.2:2554087-2554106 | None:intergenic | 45.0% | |
| GACGACAATCAGCCTGAAAA+TGG | + | chr5.2:2556368-2556387 | MS.gene21700:CDS | 45.0% | |
| GATGGCAAAAGAGCTGATCT+TGG | + | chr5.2:2557935-2557954 | MS.gene21700:CDS | 45.0% | |
| GGATAGGTTCTCACGTTAGA+TGG | - | chr5.2:2557875-2557894 | None:intergenic | 45.0% | |
| GGTGTAGGACAAGTCATCAA+GGG | + | chr5.2:2558260-2558279 | MS.gene21700:intron | 45.0% | |
| GTAACACACCCAGATCATTC+TGG | - | chr5.2:2555701-2555720 | None:intergenic | 45.0% | |
| GTGGTTACCTCTTATTCCCA+TGG | + | chr5.2:2555987-2556006 | MS.gene21700:intron | 45.0% | |
| GTGTAGGACAAGTCATCAAG+GGG | + | chr5.2:2558261-2558280 | MS.gene21700:CDS | 45.0% | |
| TCAGGGATTGAAGTGAAACC+TGG | + | chr5.2:2553807-2553826 | MS.gene21700:intron | 45.0% | |
| TCGTCAGTACTATACGGAAC+CGG | - | chr5.2:2553837-2553856 | None:intergenic | 45.0% | |
| TGAAGTGAAACCTGGCAATC+CGG | + | chr5.2:2553815-2553834 | MS.gene21700:CDS | 45.0% | |
| TGATTCGTGCACGTTTGGAT+TGG | + | chr5.2:2554573-2554592 | MS.gene21700:intron | 45.0% | |
| TGTGAGTGGGAAGTTATAGG+TGG | + | chr5.2:2555968-2555987 | MS.gene21700:intron | 45.0% | |
| TGTGCCAGATGAAAAGTCTG+AGG | + | chr5.2:2557513-2557532 | MS.gene21700:CDS | 45.0% | |
| TTCCAGGGAATGTTATACCC+AGG | - | chr5.2:2555833-2555852 | None:intergenic | 45.0% | |
| TTTCTTCAGGGATGAGGGTT+GGG | + | chr5.2:2558389-2558408 | MS.gene21700:intron | 45.0% | |
| ! | ACCTCCTCAGACTTTTCATC+TGG | - | chr5.2:2557520-2557539 | None:intergenic | 45.0% |
| ! | AGAATGCTTTTCTCCGTCGA+TGG | - | chr5.2:2555070-2555089 | None:intergenic | 45.0% |
| ! | AGATCAGCTCTTTTGCCATC+TGG | - | chr5.2:2557935-2557954 | None:intergenic | 45.0% |
| ! | GCACCCTTTAAGTTTCGACT+TGG | + | chr5.2:2558153-2558172 | MS.gene21700:CDS | 45.0% |
| ! | GCACCTTCAATCAGAAGTGT+CGG | + | chr5.2:2554086-2554105 | MS.gene21700:intron | 45.0% |
| ! | TCAAACAGGCCCAAAGTATC+TGG | - | chr5.2:2556761-2556780 | None:intergenic | 45.0% |
| ! | TGGAAGCTGAGAACTTTTGC+CGG | - | chr5.2:2556453-2556472 | None:intergenic | 45.0% |
| ! | TTAGATGGCTTGGCTTCAGT+TGG | - | chr5.2:2557860-2557879 | None:intergenic | 45.0% |
| ! | TTGATGGTTACTTGGCACCT+GGG | + | chr5.2:2554491-2554510 | MS.gene21700:intron | 45.0% |
| ! | TTTGATGGTTACTTGGCACC+TGG | + | chr5.2:2554490-2554509 | MS.gene21700:intron | 45.0% |
| ! | TTTGCTTGCATTGGCACTTG+AGG | + | chr5.2:2554920-2554939 | MS.gene21700:intron | 45.0% |
| ! | TTTTCTTCAGGGATGAGGGT+TGG | + | chr5.2:2558388-2558407 | MS.gene21700:intron | 45.0% |
| !! | CCCATCTTTTTGTAGCTTGC+CGG | - | chr5.2:2558106-2558125 | None:intergenic | 45.0% |
| !! | GGAGGAAAGTGCTCATGTAA+AGG | + | chr5.2:2557477-2557496 | MS.gene21700:CDS | 45.0% |
| !! | TCCGTATAGTACTGACGATG+TGG | + | chr5.2:2553839-2553858 | MS.gene21700:CDS | 45.0% |
| !! | TTTTCAGGCTGATTGTCGTC+GGG | - | chr5.2:2556368-2556387 | None:intergenic | 45.0% |
| AGCATTCTTCAGTGCGCTTC+TGG | + | chr5.2:2555082-2555101 | MS.gene21700:CDS | 50.0% | |
| AGCTTCTCCTTCAGCCTCTT+TGG | - | chr5.2:2557765-2557784 | None:intergenic | 50.0% | |
| AGGAAAGCTTCACGTCACTC+AGG | + | chr5.2:2553863-2553882 | MS.gene21700:CDS | 50.0% | |
| AGGACAAGTCATCAAGGGGT+GGG | + | chr5.2:2558265-2558284 | MS.gene21700:CDS | 50.0% | |
| AGGATGAGCAGCTGCAAGAT+GGG | + | chr5.2:2556687-2556706 | MS.gene21700:CDS | 50.0% | |
| GATCTGGGTGTGTTACATGC+CGG | + | chr5.2:2555705-2555724 | MS.gene21700:intron | 50.0% | |
| GATTCATTGGGAGAGGACGT+GGG | + | chr5.2:2555427-2555446 | MS.gene21700:CDS | 50.0% | |
| GCCAGATGAAAAGTCTGAGG+AGG | + | chr5.2:2557516-2557535 | MS.gene21700:CDS | 50.0% | |
| GCTCACTTGAGAGAGAAACC+CGG | + | chr5.2:2556431-2556450 | MS.gene21700:CDS | 50.0% | |
| GGTTCTCACGTTAGATGGCT+TGG | - | chr5.2:2557870-2557889 | None:intergenic | 50.0% | |
| GTCCTGGGTATAACATTCCC+TGG | + | chr5.2:2555828-2555847 | MS.gene21700:intron | 50.0% | |
| GTGTTCCTTGCTGCCAAACA+AGG | + | chr5.2:2555126-2555145 | MS.gene21700:CDS | 50.0% | |
| TAGGACAAGTCATCAAGGGG+TGG | + | chr5.2:2558264-2558283 | MS.gene21700:CDS | 50.0% | |
| TCTCTCGTGTCATCGTCATC+TGG | - | chr5.2:2555250-2555269 | None:intergenic | 50.0% | |
| TGATTCATTGGGAGAGGACG+TGG | + | chr5.2:2555426-2555445 | MS.gene21700:CDS | 50.0% | |
| TGTACACATCTTCGCCAGTC+CGG | + | chr5.2:2555530-2555549 | MS.gene21700:CDS | 50.0% | |
| TTCTTCAGGGATGAGGGTTG+GGG | + | chr5.2:2558390-2558409 | MS.gene21700:intron | 50.0% | |
| TTTCAGGCTACTCTAGGCGT+TGG | + | chr5.2:2555043-2555062 | MS.gene21700:intron | 50.0% | |
| ! | CACTTGAGGTGTCTGGAGTT+TGG | + | chr5.2:2554934-2554953 | MS.gene21700:intron | 50.0% |
| ! | CTCAACCTTGTTTGGCAGCA+AGG | - | chr5.2:2555134-2555153 | None:intergenic | 50.0% |
| ! | GCACCGACACTTCTGATTGA+AGG | - | chr5.2:2554092-2554111 | None:intergenic | 50.0% |
| ! | GGAAGCTGAGAACTTTTGCC+GGG | - | chr5.2:2556452-2556471 | None:intergenic | 50.0% |
| ! | GTTTGGTGAGGATGACTTGG+TGG | + | chr5.2:2555174-2555193 | MS.gene21700:CDS | 50.0% |
| ! | TCCCGAAGCATCCATCTTTC+TGG | + | chr5.2:2555214-2555233 | MS.gene21700:CDS | 50.0% |
| ! | TTGGTGGCATTCTCGGTCAT+CGG | + | chr5.2:2555190-2555209 | MS.gene21700:CDS | 50.0% |
| !! | GGATGACTTGGTGGCATTCT+CGG | + | chr5.2:2555183-2555202 | MS.gene21700:CDS | 50.0% |
| !! | GTTGAGTTGGTTGGCGTTGA+AGG | + | chr5.2:2558644-2558663 | MS.gene21700:CDS | 50.0% |
| AAGCCCATCCAAATGGGCCT+TGG | + | chr5.2:2554767-2554786 | MS.gene21700:intron | 55.0% | |
| ATACCTCCACTACTCCGGAC+TGG | - | chr5.2:2555547-2555566 | None:intergenic | 55.0% | |
| CTATACGGAACCGGATTGCC+AGG | - | chr5.2:2553828-2553847 | None:intergenic | 55.0% | |
| GAGGATGAGCAGCTGCAAGA+TGG | + | chr5.2:2556686-2556705 | MS.gene21700:CDS | 55.0% | |
| GGGCACGTCTCAACCTTGTT+TGG | - | chr5.2:2555142-2555161 | None:intergenic | 55.0% | |
| GTCATCAAGGGGTGGGATGT+TGG | + | chr5.2:2558272-2558291 | MS.gene21700:CDS | 55.0% | |
| ! | GCATTGGCACTTGAGGTGTC+TGG | + | chr5.2:2554927-2554946 | MS.gene21700:intron | 55.0% |
| !! | TCTAGGCGTTGGTCCATCGA+CGG | + | chr5.2:2555054-2555073 | MS.gene21700:CDS | 55.0% |
| GGGTGGGATGTTGGCGTCAA+TGG | + | chr5.2:2558281-2558300 | MS.gene21700:CDS | 60.0% | |
| TCTTCGCCAGTCCGGAGTAG+TGG | + | chr5.2:2555538-2555557 | MS.gene21700:CDS | 60.0% | |
| TGGGAGAGGACGTGGGAACT+GGG | + | chr5.2:2555434-2555453 | MS.gene21700:CDS | 60.0% | |
| TTGGGAGAGGACGTGGGAAC+TGG | + | chr5.2:2555433-2555452 | MS.gene21700:CDS | 60.0% | |
| ! | AAGGTGCGGCCTTGTGCAGA+AGG | - | chr5.2:2554073-2554092 | None:intergenic | 60.0% |
| GGACGTGGGAACTGGGTCAG+AGG | + | chr5.2:2555441-2555460 | MS.gene21700:CDS | 65.0% | |
| TCGCCAGTCCGGAGTAGTGG+AGG | + | chr5.2:2555541-2555560 | MS.gene21700:CDS | 65.0% | |
| GCGGTGCGCCCTTGTGCAGA+AGG | - | chr5.2:2554179-2554198 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 2553687 | 2558673 | 2553687 | ID=MS.gene21700 |
| chr5.2 | mRNA | 2553687 | 2558673 | 2553687 | ID=MS.gene21700.t1;Parent=MS.gene21700 |
| chr5.2 | exon | 2553687 | 2553699 | 2553687 | ID=MS.gene21700.t1.exon1;Parent=MS.gene21700.t1 |
| chr5.2 | CDS | 2553687 | 2553699 | 2553687 | ID=cds.MS.gene21700.t1;Parent=MS.gene21700.t1 |
| chr5.2 | exon | 2553811 | 2553884 | 2553811 | ID=MS.gene21700.t1.exon2;Parent=MS.gene21700.t1 |
| chr5.2 | CDS | 2553811 | 2553884 | 2553811 | ID=cds.MS.gene21700.t1;Parent=MS.gene21700.t1 |
| chr5.2 | exon | 2555049 | 2555281 | 2555049 | ID=MS.gene21700.t1.exon3;Parent=MS.gene21700.t1 |
| chr5.2 | CDS | 2555049 | 2555281 | 2555049 | ID=cds.MS.gene21700.t1;Parent=MS.gene21700.t1 |
| chr5.2 | exon | 2555426 | 2555562 | 2555426 | ID=MS.gene21700.t1.exon4;Parent=MS.gene21700.t1 |
| chr5.2 | CDS | 2555426 | 2555562 | 2555426 | ID=cds.MS.gene21700.t1;Parent=MS.gene21700.t1 |
| chr5.2 | exon | 2556348 | 2556708 | 2556348 | ID=MS.gene21700.t1.exon5;Parent=MS.gene21700.t1 |
| chr5.2 | CDS | 2556348 | 2556708 | 2556348 | ID=cds.MS.gene21700.t1;Parent=MS.gene21700.t1 |
| chr5.2 | exon | 2557435 | 2557611 | 2557435 | ID=MS.gene21700.t1.exon6;Parent=MS.gene21700.t1 |
| chr5.2 | CDS | 2557435 | 2557611 | 2557435 | ID=cds.MS.gene21700.t1;Parent=MS.gene21700.t1 |
| chr5.2 | exon | 2557718 | 2557964 | 2557718 | ID=MS.gene21700.t1.exon7;Parent=MS.gene21700.t1 |
| chr5.2 | CDS | 2557718 | 2557964 | 2557718 | ID=cds.MS.gene21700.t1;Parent=MS.gene21700.t1 |
| chr5.2 | exon | 2558087 | 2558174 | 2558087 | ID=MS.gene21700.t1.exon8;Parent=MS.gene21700.t1 |
| chr5.2 | CDS | 2558087 | 2558174 | 2558087 | ID=cds.MS.gene21700.t1;Parent=MS.gene21700.t1 |
| chr5.2 | exon | 2558261 | 2558302 | 2558261 | ID=MS.gene21700.t1.exon9;Parent=MS.gene21700.t1 |
| chr5.2 | CDS | 2558261 | 2558302 | 2558261 | ID=cds.MS.gene21700.t1;Parent=MS.gene21700.t1 |
| chr5.2 | exon | 2558398 | 2558446 | 2558398 | ID=MS.gene21700.t1.exon10;Parent=MS.gene21700.t1 |
| chr5.2 | CDS | 2558398 | 2558446 | 2558398 | ID=cds.MS.gene21700.t1;Parent=MS.gene21700.t1 |
| chr5.2 | exon | 2558589 | 2558673 | 2558589 | ID=MS.gene21700.t1.exon11;Parent=MS.gene21700.t1 |
| chr5.2 | CDS | 2558589 | 2558673 | 2558589 | ID=cds.MS.gene21700.t1;Parent=MS.gene21700.t1 |
| Gene Sequence |
| Protein sequence |
