Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057166.t1 | XP_003608851.1 | 78.1 | 447 | 27 | 1 | 1 | 376 | 1 | 447 | 9.00E-192 | 679.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057166.t1 | Q9FNJ5 | 28.4 | 225 | 110 | 8 | 24 | 223 | 12 | 210 | 3.0e-10 | 67.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057166.t1 | G7JLF9 | 78.1 | 447 | 27 | 1 | 1 | 376 | 1 | 447 | 6.5e-192 | 679.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055580 | MS.gene057166 | -0.803549 | 3.31E-49 | -1.69E-46 |
| MS.gene056043 | MS.gene057166 | -0.807341 | 5.30E-50 | -1.69E-46 |
| MS.gene057166 | MS.gene062043 | 0.805445 | 1.33E-49 | -1.69E-46 |
| MS.gene057166 | MS.gene063149 | 0.801537 | 8.59E-49 | -1.69E-46 |
| MS.gene057166 | MS.gene068925 | 0.800154 | 1.65E-48 | -1.69E-46 |
| MS.gene057166 | MS.gene069410 | 0.80918 | 2.15E-50 | -1.69E-46 |
| MS.gene057166 | MS.gene26659 | 0.807446 | 5.04E-50 | -1.69E-46 |
| MS.gene057166 | MS.gene49272 | 0.952962 | 7.78E-111 | -1.69E-46 |
| MS.gene057166 | MS.gene92342 | 0.812249 | 4.66E-51 | -1.69E-46 |
| MS.gene057166 | MS.gene98395 | 0.803738 | 3.02E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057166.t1 | MTR_4g103670 | 93.506 | 231 | 15 | 0 | 1 | 231 | 1 | 231 | 2.39e-156 | 447 |
| MS.gene057166.t1 | MTR_4g103670 | 90.541 | 148 | 14 | 0 | 229 | 376 | 300 | 447 | 1.45e-91 | 282 |
| MS.gene057166.t1 | MTR_8g085430 | 25.387 | 323 | 191 | 14 | 25 | 332 | 11 | 298 | 8.56e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057166.t1 | AT5G22660 | 28.000 | 225 | 111 | 7 | 24 | 223 | 12 | 210 | 6.01e-12 | 67.0 |
| MS.gene057166.t1 | AT5G22660 | 27.876 | 226 | 112 | 7 | 24 | 224 | 12 | 211 | 7.77e-12 | 66.2 |
Find 53 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCCAGTGGTCTCAATTT+TGG | 0.140756 | 8.1:+20667183 | None:intergenic |
| CAAAAGCTTGAACTGTATTT+TGG | 0.155203 | 8.1:-20668221 | MS.gene057166:CDS |
| GTTCTAGCAGCTTCATTTAT+TGG | 0.156740 | 8.1:+20668542 | None:intergenic |
| AACTCAATGTTTCAAGTAAT+TGG | 0.188947 | 8.1:+20668072 | None:intergenic |
| TAGGGATTCCATCTGGTAAT+TGG | 0.232800 | 8.1:+20668585 | None:intergenic |
| CTTTACAAGGATTGAAGTTT+TGG | 0.244340 | 8.1:-20668307 | MS.gene057166:CDS |
| CAAGCATTCTCTCAAGAAAA+TGG | 0.263845 | 8.1:-20668520 | MS.gene057166:CDS |
| TGGCGAACCTTCAAATTCTA+AGG | 0.297612 | 8.1:+20668469 | None:intergenic |
| AAAGATATTAAGAAGATTAC+AGG | 0.308971 | 8.1:-20668428 | MS.gene057166:CDS |
| GAAGTTGAAATGTTTAGAAT+TGG | 0.345201 | 8.1:-20668000 | MS.gene057166:intron |
| TTCTGTTCTATAAGTTGGTT+TGG | 0.367054 | 8.1:+20667359 | None:intergenic |
| ATGAGGAGCACTTCGAAACT+TGG | 0.382277 | 8.1:-20667164 | MS.gene057166:CDS |
| TGAAGGCATCACCTTCACTA+TGG | 0.389662 | 8.1:-20667584 | MS.gene057166:CDS |
| CTTCAATGTTCCACTTTACA+AGG | 0.396206 | 8.1:-20668320 | MS.gene057166:CDS |
| AGTTGGTAACCTTGTATCAA+TGG | 0.402975 | 8.1:+20667209 | None:intergenic |
| TTGTGTTCTGTTCTATAAGT+TGG | 0.403461 | 8.1:+20667354 | None:intergenic |
| TAGTCTTAAGGAGTTGGAAT+TGG | 0.417944 | 8.1:-20667310 | MS.gene057166:CDS |
| TCAATATAGTCTTAAGGAGT+TGG | 0.433439 | 8.1:-20667316 | MS.gene057166:CDS |
| CTGTTAGTGAGATTGATAAC+TGG | 0.438462 | 8.1:-20668271 | MS.gene057166:CDS |
| CTTAAGGAGTTGGAATTGGT+TGG | 0.443178 | 8.1:-20667306 | MS.gene057166:CDS |
| TTGGTTGCTTGTGCTGATGA+TGG | 0.445841 | 8.1:-20667630 | MS.gene057166:CDS |
| TTAAGGAGTTGGAATTGGTT+GGG | 0.454849 | 8.1:-20667305 | MS.gene057166:CDS |
| AAACTTCAATCCTTGTAAAG+TGG | 0.464982 | 8.1:+20668310 | None:intergenic |
| GGAATGTCAATATAGTCTTA+AGG | 0.467087 | 8.1:-20667322 | MS.gene057166:CDS |
| TCAGGTACCTTAGAATTTGA+AGG | 0.468778 | 8.1:-20668476 | MS.gene057166:CDS |
| TACAGGAGGGCGTTTACAAA+TGG | 0.469319 | 8.1:-20668411 | MS.gene057166:CDS |
| TGCTTGTGTTATGTTATTGA+AGG | 0.471547 | 8.1:-20667601 | MS.gene057166:CDS |
| AAATCTTAAGCAATTGGAGT+TGG | 0.492137 | 8.1:-20667649 | MS.gene057166:CDS |
| AAGAAAACAGAAAGCGTGCT+TGG | 0.505333 | 8.1:-20667134 | MS.gene057166:CDS |
| ACTATGGAGGTTCACAATCA+AGG | 0.522614 | 8.1:-20667568 | MS.gene057166:intron |
| AAAGACAAACATATACAAGT+TGG | 0.526005 | 8.1:-20668364 | MS.gene057166:CDS |
| CTTGCTAGTTCCATCTTGCA+TGG | 0.528156 | 8.1:+20668670 | None:intergenic |
| ATGTTTATAGGGATTCCATC+TGG | 0.532347 | 8.1:+20668578 | None:intergenic |
| TAAACCAAAATTGAGACCAC+TGG | 0.537013 | 8.1:-20667187 | MS.gene057166:CDS |
| AAAATTGAGACCACTGGATG+AGG | 0.539307 | 8.1:-20667181 | MS.gene057166:CDS |
| AAAGCGTGCTTGGCAACTGA+AGG | 0.540430 | 8.1:-20667124 | MS.gene057166:CDS |
| CAAGATGGAACTAGCAAGGA+TGG | 0.572752 | 8.1:-20668665 | MS.gene057166:CDS |
| TGAGGAGCACTTCGAAACTT+GGG | 0.577370 | 8.1:-20667163 | MS.gene057166:CDS |
| AAATTTAGGACCATGCAAGA+TGG | 0.582567 | 8.1:-20668680 | None:intergenic |
| ATCATAAACCAATTACCAGA+TGG | 0.587532 | 8.1:-20668593 | MS.gene057166:CDS |
| AGGGCGTTTACAAATGGCAA+TGG | 0.590173 | 8.1:-20668405 | MS.gene057166:CDS |
| AGGCAAACAAATTCAATACA+AGG | 0.595696 | 8.1:+20667090 | None:intergenic |
| AACAGAACACAAATTCGCAA+TGG | 0.597684 | 8.1:-20667343 | MS.gene057166:CDS |
| AGAAAATAACCATTGATACA+AGG | 0.601361 | 8.1:-20667218 | MS.gene057166:CDS |
| AAGCGTGCTTGGCAACTGAA+GGG | 0.614102 | 8.1:-20667123 | MS.gene057166:CDS |
| GATATTAAGAAGATTACAGG+AGG | 0.616053 | 8.1:-20668425 | MS.gene057166:CDS |
| TCGAAGTGCTCCTCATCCAG+TGG | 0.628384 | 8.1:+20667171 | None:intergenic |
| CATGCAAGATGGAACTAGCA+AGG | 0.633283 | 8.1:-20668669 | MS.gene057166:CDS |
| TTTCATACGCAAAACACACA+AGG | 0.643615 | 8.1:+20668142 | None:intergenic |
| AGGCATCACCTTCACTATGG+AGG | 0.644864 | 8.1:-20667581 | MS.gene057166:CDS |
| ATTGTGAACCTCCATAGTGA+AGG | 0.697331 | 8.1:+20667573 | None:intergenic |
| CAAACAAATTCAATACAAGG+TGG | 0.709789 | 8.1:+20667093 | None:intergenic |
| ATATTAAGAAGATTACAGGA+GGG | 0.748188 | 8.1:-20668424 | MS.gene057166:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTGATAAAATGTTTAT+AGG | + | chr8.1:20667191-20667210 | None:intergenic | 10.0% |
| !!! | ATTTTGATAAAATGTTTATA+GGG | + | chr8.1:20667190-20667209 | None:intergenic | 10.0% |
| !! | AAAGATATTAAGAAGATTAC+AGG | - | chr8.1:20667326-20667345 | MS.gene057166:CDS | 20.0% |
| !! | CAAGAAAATGGAAAAATATA+TGG | - | chr8.1:20667246-20667265 | MS.gene057166:CDS | 20.0% |
| !! | CAATAAATCTGAAAATAACA+CGG | + | chr8.1:20668061-20668080 | None:intergenic | 20.0% |
| !! | GTTAAAAAATCTTAAGCAAT+TGG | - | chr8.1:20668099-20668118 | MS.gene057166:CDS | 20.0% |
| !!! | AATTTAAGCACTTTTATTTG+TGG | + | chr8.1:20667941-20667960 | None:intergenic | 20.0% |
| !!! | ACAAATAAAAGTGCTTAAAT+TGG | - | chr8.1:20667940-20667959 | MS.gene057166:intron | 20.0% |
| !!! | TGCTTAAGATTTTTTAACTT+GGG | + | chr8.1:20668097-20668116 | None:intergenic | 20.0% |
| !!! | TTGCTTAAGATTTTTTAACT+TGG | + | chr8.1:20668098-20668117 | None:intergenic | 20.0% |
| !!! | TTTTTCATGTCTTTCATAAT+TGG | + | chr8.1:20667308-20667327 | None:intergenic | 20.0% |
| ! | AAAGACAAACATATACAAGT+TGG | - | chr8.1:20667390-20667409 | MS.gene057166:intron | 25.0% |
| ! | AGAAAATAACCATTGATACA+AGG | - | chr8.1:20668536-20668555 | MS.gene057166:CDS | 25.0% |
| ! | ATATTAAGAAGATTACAGGA+GGG | - | chr8.1:20667330-20667349 | MS.gene057166:CDS | 25.0% |
| ! | TACAAAAGAGTCATAATCTA+GGG | + | chr8.1:20668257-20668276 | None:intergenic | 25.0% |
| !! | AACTCAATGTTTCAAGTAAT+TGG | + | chr8.1:20667685-20667704 | None:intergenic | 25.0% |
| !! | GAAGTTGAAATGTTTAGAAT+TGG | - | chr8.1:20667754-20667773 | MS.gene057166:intron | 25.0% |
| !! | TTTAGAATTGGTAAGATGTT+GGG | - | chr8.1:20667766-20667785 | MS.gene057166:intron | 25.0% |
| !!! | AATATATGGACCTATTTTTC+AGG | - | chr8.1:20667260-20667279 | MS.gene057166:CDS | 25.0% |
| !!! | CGTGTTATTTTCAGATTTAT+TGG | - | chr8.1:20668059-20668078 | MS.gene057166:CDS | 25.0% |
| !!! | TTGTATCAATGGTTATTTTC+TGG | + | chr8.1:20668537-20668556 | None:intergenic | 25.0% |
| AAACTTCAATCCTTGTAAAG+TGG | + | chr8.1:20667447-20667466 | None:intergenic | 30.0% | |
| AAATCTTAAGCAATTGGAGT+TGG | - | chr8.1:20668105-20668124 | MS.gene057166:CDS | 30.0% | |
| AAGAGTTCCAAAAACTATGA+AGG | - | chr8.1:20667715-20667734 | MS.gene057166:intron | 30.0% | |
| AGGCAAACAAATTCAATACA+AGG | + | chr8.1:20668667-20668686 | None:intergenic | 30.0% | |
| ATCATAAACCAATTACCAGA+TGG | - | chr8.1:20667161-20667180 | MS.gene057166:CDS | 30.0% | |
| ATTATTTATGCCCAAAAGCT+AGG | - | chr8.1:20668321-20668340 | MS.gene057166:CDS | 30.0% | |
| CAAACAAATTCAATACAAGG+TGG | + | chr8.1:20668664-20668683 | None:intergenic | 30.0% | |
| CTACAAAAGAGTCATAATCT+AGG | + | chr8.1:20668258-20668277 | None:intergenic | 30.0% | |
| GATATTAAGAAGATTACAGG+AGG | - | chr8.1:20667329-20667348 | MS.gene057166:CDS | 30.0% | |
| TAAGAAAAGAAAGGTAGGTA+GGG | + | chr8.1:20668000-20668019 | None:intergenic | 30.0% | |
| TGCTTGTGTTATGTTATTGA+AGG | - | chr8.1:20668153-20668172 | MS.gene057166:CDS | 30.0% | |
| TTAACAAAGCTAAAGACACA+AGG | + | chr8.1:20668219-20668238 | None:intergenic | 30.0% | |
| TTGTGTTCTGTTCTATAAGT+TGG | + | chr8.1:20668403-20668422 | None:intergenic | 30.0% | |
| ! | ATCTCACTAACAGTTTTCAT+AGG | + | chr8.1:20667476-20667495 | None:intergenic | 30.0% |
| ! | CAAAAGCTTGAACTGTATTT+TGG | - | chr8.1:20667533-20667552 | MS.gene057166:intron | 30.0% |
| ! | CTTTACAAGGATTGAAGTTT+TGG | - | chr8.1:20667447-20667466 | MS.gene057166:intron | 30.0% |
| ! | GGAATGTCAATATAGTCTTA+AGG | - | chr8.1:20668432-20668451 | MS.gene057166:CDS | 30.0% |
| ! | GTTTAGAATTGGTAAGATGT+TGG | - | chr8.1:20667765-20667784 | MS.gene057166:intron | 30.0% |
| ! | TCAATATAGTCTTAAGGAGT+TGG | - | chr8.1:20668438-20668457 | MS.gene057166:CDS | 30.0% |
| ! | TCTTCCATTGCACATTTTTA+AGG | - | chr8.1:20667574-20667593 | MS.gene057166:CDS | 30.0% |
| ! | TTAGTGTCATTCAAATACGA+TGG | - | chr8.1:20667821-20667840 | MS.gene057166:intron | 30.0% |
| !! | TTCTAAGGTACCTGAAAAAT+AGG | + | chr8.1:20667273-20667292 | None:intergenic | 30.0% |
| !! | TTCTGTTCTATAAGTTGGTT+TGG | + | chr8.1:20668398-20668417 | None:intergenic | 30.0% |
| AAACCAGCCTAAGAAAAGAA+AGG | + | chr8.1:20668009-20668028 | None:intergenic | 35.0% | |
| AACAGAACACAAATTCGCAA+TGG | - | chr8.1:20668411-20668430 | MS.gene057166:CDS | 35.0% | |
| ATGTTTATAGGGATTCCATC+TGG | + | chr8.1:20667179-20667198 | None:intergenic | 35.0% | |
| CAAATACGATGGATCACATT+TGG | - | chr8.1:20667832-20667851 | MS.gene057166:intron | 35.0% | |
| CAAGCATTCTCTCAAGAAAA+TGG | - | chr8.1:20667234-20667253 | MS.gene057166:CDS | 35.0% | |
| CCAAAAACTATGAAGGTTTC+AGG | - | chr8.1:20667722-20667741 | MS.gene057166:intron | 35.0% | |
| CTAAGAAAAGAAAGGTAGGT+AGG | + | chr8.1:20668001-20668020 | None:intergenic | 35.0% | |
| CTTCAATGTTCCACTTTACA+AGG | - | chr8.1:20667434-20667453 | MS.gene057166:intron | 35.0% | |
| GTTCTAGCAGCTTCATTTAT+TGG | + | chr8.1:20667215-20667234 | None:intergenic | 35.0% | |
| TAAACCAAAATTGAGACCAC+TGG | - | chr8.1:20668567-20668586 | MS.gene057166:CDS | 35.0% | |
| TCAGGTACCTTAGAATTTGA+AGG | - | chr8.1:20667278-20667297 | MS.gene057166:CDS | 35.0% | |
| TCCACCTTAAAAATGTGCAA+TGG | + | chr8.1:20667581-20667600 | None:intergenic | 35.0% | |
| TCGCTTTGCAGTTCAAAAAA+AGG | - | chr8.1:20667508-20667527 | MS.gene057166:intron | 35.0% | |
| TTAAGGAGTTGGAATTGGTT+GGG | - | chr8.1:20668449-20668468 | MS.gene057166:CDS | 35.0% | |
| TTGTCTAACAAACTCCACAA+AGG | + | chr8.1:20667909-20667928 | None:intergenic | 35.0% | |
| TTTCATACGCAAAACACACA+AGG | + | chr8.1:20667615-20667634 | None:intergenic | 35.0% | |
| ! | CCTGAAACCTTCATAGTTTT+TGG | + | chr8.1:20667725-20667744 | None:intergenic | 35.0% |
| ! | CTACCTACCTTTCTTTTCTT+AGG | - | chr8.1:20667999-20668018 | MS.gene057166:intron | 35.0% |
| ! | CTGTTAGTGAGATTGATAAC+TGG | - | chr8.1:20667483-20667502 | MS.gene057166:intron | 35.0% |
| ! | TAGTCTTAAGGAGTTGGAAT+TGG | - | chr8.1:20668444-20668463 | MS.gene057166:CDS | 35.0% |
| !! | AGTTGGTAACCTTGTATCAA+TGG | + | chr8.1:20668548-20668567 | None:intergenic | 35.0% |
| !! | TCACAACTATCCTAGCTTTT+GGG | + | chr8.1:20668334-20668353 | None:intergenic | 35.0% |
| !! | TCCATTGCACATTTTTAAGG+TGG | - | chr8.1:20667577-20667596 | MS.gene057166:CDS | 35.0% |
| !! | TTCACAACTATCCTAGCTTT+TGG | + | chr8.1:20668335-20668354 | None:intergenic | 35.0% |
| !!! | GGTCTCAATTTTGGTTTAGT+TGG | + | chr8.1:20668565-20668584 | None:intergenic | 35.0% |
| AAAATTGAGACCACTGGATG+AGG | - | chr8.1:20668573-20668592 | MS.gene057166:CDS | 40.0% | |
| AAAGATGCTTCCTCAAGACA+TGG | + | chr8.1:20667878-20667897 | None:intergenic | 40.0% | |
| ACTATGGAGGTTCACAATCA+AGG | - | chr8.1:20668186-20668205 | MS.gene057166:CDS | 40.0% | |
| ATTGTGAACCTCCATAGTGA+AGG | + | chr8.1:20668184-20668203 | None:intergenic | 40.0% | |
| CAGCCTAAGAAAAGAAAGGT+AGG | + | chr8.1:20668005-20668024 | None:intergenic | 40.0% | |
| CTTAAGGAGTTGGAATTGGT+TGG | - | chr8.1:20668448-20668467 | MS.gene057166:CDS | 40.0% | |
| TAGGGATTCCATCTGGTAAT+TGG | + | chr8.1:20667172-20667191 | None:intergenic | 40.0% | |
| TGGCGAACCTTCAAATTCTA+AGG | + | chr8.1:20667288-20667307 | None:intergenic | 40.0% | |
| ! | AAGAAAACAGAAAGCGTGCT+TGG | - | chr8.1:20668620-20668639 | MS.gene057166:CDS | 40.0% |
| ! | CTACCTTTCTTTTCTTAGGC+TGG | - | chr8.1:20668003-20668022 | MS.gene057166:CDS | 40.0% |
| ! | TCATCCAGTGGTCTCAATTT+TGG | + | chr8.1:20668574-20668593 | None:intergenic | 40.0% |
| ! | TTGGAATTGGTTGGGTTTTG+TGG | - | chr8.1:20668457-20668476 | MS.gene057166:CDS | 40.0% |
| !! | ATCTTTTGGAGGATCCTTTG+TGG | - | chr8.1:20667892-20667911 | MS.gene057166:intron | 40.0% |
| !!! | TGTCTTGAGGAAGCATCTTT+TGG | - | chr8.1:20667878-20667897 | MS.gene057166:intron | 40.0% |
| CAAGATGGAACTAGCAAGGA+TGG | - | chr8.1:20667089-20667108 | MS.gene057166:CDS | 45.0% | |
| CACACAAAACTCACCTGAAG+TGG | - | chr8.1:20667967-20667986 | MS.gene057166:intron | 45.0% | |
| GTAGGGAAGTTTACCACTTC+AGG | + | chr8.1:20667983-20668002 | None:intergenic | 45.0% | |
| ! | AGGGCGTTTACAAATGGCAA+TGG | - | chr8.1:20667349-20667368 | MS.gene057166:CDS | 45.0% |
| ! | TTGGTTGCTTGTGCTGATGA+TGG | - | chr8.1:20668124-20668143 | MS.gene057166:CDS | 45.0% |
| !! | ATGAGGAGCACTTCGAAACT+TGG | - | chr8.1:20668590-20668609 | MS.gene057166:CDS | 45.0% |
| !! | CAAGAGTGTTCCATGTCTTG+AGG | - | chr8.1:20667865-20667884 | MS.gene057166:intron | 45.0% |
| !! | TACAGGAGGGCGTTTACAAA+TGG | - | chr8.1:20667343-20667362 | MS.gene057166:CDS | 45.0% |
| !! | TGAAGGCATCACCTTCACTA+TGG | - | chr8.1:20668170-20668189 | MS.gene057166:CDS | 45.0% |
| !! | TGAGGAGCACTTCGAAACTT+GGG | - | chr8.1:20668591-20668610 | MS.gene057166:CDS | 45.0% |
| !!! | CTTGAGGAAGCATCTTTTGG+AGG | - | chr8.1:20667881-20667900 | MS.gene057166:intron | 45.0% |
| AAAGCGTGCTTGGCAACTGA+AGG | - | chr8.1:20668630-20668649 | MS.gene057166:CDS | 50.0% | |
| AAGCGTGCTTGGCAACTGAA+GGG | - | chr8.1:20668631-20668650 | MS.gene057166:CDS | 50.0% | |
| AGGCATCACCTTCACTATGG+AGG | - | chr8.1:20668173-20668192 | MS.gene057166:CDS | 50.0% | |
| ! | TCGAAGTGCTCCTCATCCAG+TGG | + | chr8.1:20668586-20668605 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 20667086 | 20668690 | 20667086 | ID=MS.gene057166 |
| chr8.1 | mRNA | 20667086 | 20668690 | 20667086 | ID=MS.gene057166.t1;Parent=MS.gene057166 |
| chr8.1 | exon | 20668001 | 20668690 | 20668001 | ID=MS.gene057166.t1.exon1;Parent=MS.gene057166.t1 |
| chr8.1 | CDS | 20668001 | 20668690 | 20668001 | ID=cds.MS.gene057166.t1;Parent=MS.gene057166.t1 |
| chr8.1 | exon | 20667569 | 20667703 | 20667569 | ID=MS.gene057166.t1.exon2;Parent=MS.gene057166.t1 |
| chr8.1 | CDS | 20667569 | 20667703 | 20667569 | ID=cds.MS.gene057166.t1;Parent=MS.gene057166.t1 |
| chr8.1 | exon | 20667086 | 20667391 | 20667086 | ID=MS.gene057166.t1.exon3;Parent=MS.gene057166.t1 |
| chr8.1 | CDS | 20667086 | 20667391 | 20667086 | ID=cds.MS.gene057166.t1;Parent=MS.gene057166.t1 |
| Gene Sequence |
| Protein sequence |
