Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063149.t1 | XP_024635707.1 | 87.5 | 265 | 31 | 2 | 1 | 265 | 1 | 263 | 5.20E-117 | 430.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063149.t1 | G7J762 | 87.5 | 265 | 31 | 2 | 1 | 265 | 1 | 263 | 3.7e-117 | 430.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene063149 | 0.881872 | 1.67E-70 | -1.69E-46 |
MS.gene049159 | MS.gene063149 | 0.820057 | 8.39E-53 | -1.69E-46 |
MS.gene04918 | MS.gene063149 | 0.809485 | 1.85E-50 | -1.69E-46 |
MS.gene049254 | MS.gene063149 | 0.855261 | 7.10E-62 | -1.69E-46 |
MS.gene049350 | MS.gene063149 | 0.818566 | 1.83E-52 | -1.69E-46 |
MS.gene049368 | MS.gene063149 | 0.825307 | 5.03E-54 | -1.69E-46 |
MS.gene049499 | MS.gene063149 | 0.828723 | 7.67E-55 | -1.69E-46 |
MS.gene049501 | MS.gene063149 | 0.816076 | 6.66E-52 | -1.69E-46 |
MS.gene049647 | MS.gene063149 | 0.815796 | 7.70E-52 | -1.69E-46 |
MS.gene049711 | MS.gene063149 | 0.832913 | 7.21E-56 | -1.69E-46 |
MS.gene049807 | MS.gene063149 | 0.830386 | 3.02E-55 | -1.69E-46 |
MS.gene049850 | MS.gene063149 | 0.822013 | 2.97E-53 | -1.69E-46 |
MS.gene049887 | MS.gene063149 | 0.803293 | 3.74E-49 | -1.69E-46 |
MS.gene049983 | MS.gene063149 | 0.864126 | 1.52E-64 | -1.69E-46 |
MS.gene050224 | MS.gene063149 | 0.809275 | 2.05E-50 | -1.69E-46 |
MS.gene050551 | MS.gene063149 | 0.814066 | 1.86E-51 | -1.69E-46 |
MS.gene050654 | MS.gene063149 | 0.81015 | 1.33E-50 | -1.69E-46 |
MS.gene050657 | MS.gene063149 | 0.821601 | 3.70E-53 | -1.69E-46 |
MS.gene050759 | MS.gene063149 | 0.810185 | 1.31E-50 | -1.69E-46 |
MS.gene050941 | MS.gene063149 | 0.817828 | 2.69E-52 | -1.69E-46 |
MS.gene051198 | MS.gene063149 | 0.8222 | 2.69E-53 | -1.69E-46 |
MS.gene051210 | MS.gene063149 | 0.80277 | 4.79E-49 | -1.69E-46 |
MS.gene051247 | MS.gene063149 | 0.821714 | 3.49E-53 | -1.69E-46 |
MS.gene051279 | MS.gene063149 | 0.822046 | 2.92E-53 | -1.69E-46 |
MS.gene051332 | MS.gene063149 | 0.824801 | 6.63E-54 | -1.69E-46 |
MS.gene051388 | MS.gene063149 | 0.816555 | 5.21E-52 | -1.69E-46 |
MS.gene051490 | MS.gene063149 | 0.819849 | 9.36E-53 | -1.69E-46 |
MS.gene051700 | MS.gene063149 | 0.814689 | 1.36E-51 | -1.69E-46 |
MS.gene051720 | MS.gene063149 | 0.81591 | 7.26E-52 | -1.69E-46 |
MS.gene051744 | MS.gene063149 | 0.838401 | 2.94E-57 | -1.69E-46 |
MS.gene051800 | MS.gene063149 | 0.824662 | 7.15E-54 | -1.69E-46 |
MS.gene051852 | MS.gene063149 | 0.805578 | 1.25E-49 | -1.69E-46 |
MS.gene052037 | MS.gene063149 | 0.829762 | 4.29E-55 | -1.69E-46 |
MS.gene052307 | MS.gene063149 | 0.833671 | 4.66E-56 | -1.69E-46 |
MS.gene052459 | MS.gene063149 | 0.800136 | 1.66E-48 | -1.69E-46 |
MS.gene052463 | MS.gene063149 | 0.86705 | 1.82E-65 | -1.69E-46 |
MS.gene052516 | MS.gene063149 | 0.861422 | 1.04E-63 | -1.69E-46 |
MS.gene052518 | MS.gene063149 | 0.820098 | 8.21E-53 | -1.69E-46 |
MS.gene052519 | MS.gene063149 | 0.838575 | 2.65E-57 | -1.69E-46 |
MS.gene052534 | MS.gene063149 | 0.807658 | 4.54E-50 | -1.69E-46 |
MS.gene052582 | MS.gene063149 | 0.804249 | 2.37E-49 | -1.69E-46 |
MS.gene052584 | MS.gene063149 | 0.8183 | 2.11E-52 | -1.69E-46 |
MS.gene052609 | MS.gene063149 | 0.81401 | 1.91E-51 | -1.69E-46 |
MS.gene052773 | MS.gene063149 | 0.812727 | 3.67E-51 | -1.69E-46 |
MS.gene052863 | MS.gene063149 | 0.82329 | 1.50E-53 | -1.69E-46 |
MS.gene052896 | MS.gene063149 | 0.814766 | 1.30E-51 | -1.69E-46 |
MS.gene053079 | MS.gene063149 | 0.848563 | 5.66E-60 | -1.69E-46 |
MS.gene053144 | MS.gene063149 | 0.820334 | 7.25E-53 | -1.69E-46 |
MS.gene053164 | MS.gene063149 | 0.806333 | 8.66E-50 | -1.69E-46 |
MS.gene053226 | MS.gene063149 | 0.833092 | 6.50E-56 | -1.69E-46 |
MS.gene053272 | MS.gene063149 | -0.811734 | 6.04E-51 | -1.69E-46 |
MS.gene053296 | MS.gene063149 | 0.803278 | 3.76E-49 | -1.69E-46 |
MS.gene054236 | MS.gene063149 | 0.821682 | 3.55E-53 | -1.69E-46 |
MS.gene05423 | MS.gene063149 | 0.833106 | 6.45E-56 | -1.69E-46 |
MS.gene054479 | MS.gene063149 | 0.804324 | 2.28E-49 | -1.69E-46 |
MS.gene054584 | MS.gene063149 | 0.813776 | 2.16E-51 | -1.69E-46 |
MS.gene05458 | MS.gene063149 | 0.850532 | 1.60E-60 | -1.69E-46 |
MS.gene054641 | MS.gene063149 | 0.804055 | 2.60E-49 | -1.69E-46 |
MS.gene054651 | MS.gene063149 | 0.851335 | 9.49E-61 | -1.69E-46 |
MS.gene054775 | MS.gene063149 | 0.81639 | 5.67E-52 | -1.69E-46 |
MS.gene054991 | MS.gene063149 | 0.836724 | 7.91E-57 | -1.69E-46 |
MS.gene055228 | MS.gene063149 | 0.80548 | 1.31E-49 | -1.69E-46 |
MS.gene055310 | MS.gene063149 | 0.801411 | 9.12E-49 | -1.69E-46 |
MS.gene055465 | MS.gene063149 | 0.805077 | 1.59E-49 | -1.69E-46 |
MS.gene055466 | MS.gene063149 | 0.824976 | 6.03E-54 | -1.69E-46 |
MS.gene055468 | MS.gene063149 | 0.818517 | 1.88E-52 | -1.69E-46 |
MS.gene055513 | MS.gene063149 | 0.857636 | 1.43E-62 | -1.69E-46 |
MS.gene055580 | MS.gene063149 | -0.814507 | 1.49E-51 | -1.69E-46 |
MS.gene055589 | MS.gene063149 | 0.801483 | 8.82E-49 | -1.69E-46 |
MS.gene05574 | MS.gene063149 | 0.801522 | 8.65E-49 | -1.69E-46 |
MS.gene055818 | MS.gene063149 | 0.80804 | 3.76E-50 | -1.69E-46 |
MS.gene055864 | MS.gene063149 | 0.814848 | 1.25E-51 | -1.69E-46 |
MS.gene055926 | MS.gene063149 | 0.817549 | 3.11E-52 | -1.69E-46 |
MS.gene056043 | MS.gene063149 | -0.809988 | 1.44E-50 | -1.69E-46 |
MS.gene056050 | MS.gene063149 | 0.824966 | 6.06E-54 | -1.69E-46 |
MS.gene056174 | MS.gene063149 | 0.821782 | 3.36E-53 | -1.69E-46 |
MS.gene056308 | MS.gene063149 | 0.830203 | 3.35E-55 | -1.69E-46 |
MS.gene056507 | MS.gene063149 | 0.802805 | 4.71E-49 | -1.69E-46 |
MS.gene056595 | MS.gene063149 | 0.819476 | 1.14E-52 | -1.69E-46 |
MS.gene056699 | MS.gene063149 | 0.837375 | 5.40E-57 | -1.69E-46 |
MS.gene056831 | MS.gene063149 | 0.811598 | 6.46E-51 | -1.69E-46 |
MS.gene05686 | MS.gene063149 | 0.843898 | 1.06E-58 | -1.69E-46 |
MS.gene05690 | MS.gene063149 | 0.832364 | 9.86E-56 | -1.69E-46 |
MS.gene057034 | MS.gene063149 | 0.830082 | 3.59E-55 | -1.69E-46 |
MS.gene057102 | MS.gene063149 | 0.837059 | 6.50E-57 | -1.69E-46 |
MS.gene057132 | MS.gene063149 | 0.819024 | 1.44E-52 | -1.69E-46 |
MS.gene057166 | MS.gene063149 | 0.801537 | 8.59E-49 | -1.69E-46 |
MS.gene057208 | MS.gene063149 | 0.810206 | 1.29E-50 | -1.69E-46 |
MS.gene057915 | MS.gene063149 | 0.83271 | 8.09E-56 | -1.69E-46 |
MS.gene058008 | MS.gene063149 | 0.807565 | 4.75E-50 | -1.69E-46 |
MS.gene058009 | MS.gene063149 | 0.814656 | 1.38E-51 | -1.69E-46 |
MS.gene058010 | MS.gene063149 | 0.839464 | 1.56E-57 | -1.69E-46 |
MS.gene058037 | MS.gene063149 | 0.80006 | 1.72E-48 | -1.69E-46 |
MS.gene058159 | MS.gene063149 | 0.806437 | 8.23E-50 | -1.69E-46 |
MS.gene058330 | MS.gene063149 | 0.809687 | 1.67E-50 | -1.69E-46 |
MS.gene058339 | MS.gene063149 | 0.813278 | 2.78E-51 | -1.69E-46 |
MS.gene058625 | MS.gene063149 | 0.834128 | 3.58E-56 | -1.69E-46 |
MS.gene058668 | MS.gene063149 | 0.811247 | 7.70E-51 | -1.69E-46 |
MS.gene058781 | MS.gene063149 | 0.811482 | 6.85E-51 | -1.69E-46 |
MS.gene058783 | MS.gene063149 | 0.824155 | 9.41E-54 | -1.69E-46 |
MS.gene058979 | MS.gene063149 | 0.820858 | 5.49E-53 | -1.69E-46 |
MS.gene05897 | MS.gene063149 | 0.808675 | 2.76E-50 | -1.69E-46 |
MS.gene059170 | MS.gene063149 | 0.835662 | 1.47E-56 | -1.69E-46 |
MS.gene059272 | MS.gene063149 | 0.806699 | 7.25E-50 | -1.69E-46 |
MS.gene059283 | MS.gene063149 | 0.837584 | 4.77E-57 | -1.69E-46 |
MS.gene059439 | MS.gene063149 | 0.812174 | 4.84E-51 | -1.69E-46 |
MS.gene05952 | MS.gene063149 | 0.802177 | 6.35E-49 | -1.69E-46 |
MS.gene059570 | MS.gene063149 | 0.843127 | 1.70E-58 | -1.69E-46 |
MS.gene059625 | MS.gene063149 | 0.82324 | 1.54E-53 | -1.69E-46 |
MS.gene059774 | MS.gene063149 | 0.811815 | 5.80E-51 | -1.69E-46 |
MS.gene059842 | MS.gene063149 | 0.825481 | 4.58E-54 | -1.69E-46 |
MS.gene059965 | MS.gene063149 | 0.812176 | 4.84E-51 | -1.69E-46 |
MS.gene060011 | MS.gene063149 | 0.812081 | 5.07E-51 | -1.69E-46 |
MS.gene060167 | MS.gene063149 | 0.801509 | 8.71E-49 | -1.69E-46 |
MS.gene06052 | MS.gene063149 | 0.851579 | 8.10E-61 | -1.69E-46 |
MS.gene060697 | MS.gene063149 | 0.810302 | 1.23E-50 | -1.69E-46 |
MS.gene060777 | MS.gene063149 | 0.815757 | 7.85E-52 | -1.69E-46 |
MS.gene060932 | MS.gene063149 | 0.858933 | 5.86E-63 | -1.69E-46 |
MS.gene060935 | MS.gene063149 | 0.827029 | 1.96E-54 | -1.69E-46 |
MS.gene060937 | MS.gene063149 | 0.835729 | 1.42E-56 | -1.69E-46 |
MS.gene061100 | MS.gene063149 | 0.843438 | 1.40E-58 | -1.69E-46 |
MS.gene061160 | MS.gene063149 | 0.804792 | 1.82E-49 | -1.69E-46 |
MS.gene061188 | MS.gene063149 | 0.828375 | 9.31E-55 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063149.t1 | MTR_3g117050 | 91.698 | 265 | 20 | 2 | 1 | 265 | 1 | 263 | 4.01e-172 | 476 |
MS.gene063149.t1 | MTR_4g070660 | 41.445 | 263 | 98 | 13 | 3 | 255 | 5 | 221 | 5.09e-32 | 117 |
MS.gene063149.t1 | MTR_4g070640 | 38.735 | 253 | 96 | 10 | 10 | 255 | 9 | 209 | 4.14e-26 | 102 |
MS.gene063149.t1 | MTR_4g070630 | 36.111 | 216 | 76 | 8 | 49 | 254 | 2 | 165 | 9.92e-25 | 97.4 |
MS.gene063149.t1 | MTR_8g077085 | 30.380 | 237 | 139 | 9 | 22 | 256 | 12 | 224 | 1.35e-19 | 85.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063149.t1 | AT5G66440 | 27.372 | 274 | 147 | 7 | 1 | 257 | 1 | 239 | 2.74e-21 | 90.1 |
MS.gene063149.t1 | AT4G34560 | 31.527 | 203 | 92 | 8 | 64 | 264 | 63 | 220 | 6.62e-15 | 72.4 |
MS.gene063149.t1 | AT2G21560 | 27.007 | 274 | 171 | 11 | 1 | 255 | 1 | 264 | 1.29e-12 | 66.6 |
Find 30 sgRNAs with CRISPR-Local
Find 40 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACAGATTAGCTAGGGATAAA+TGG | 0.269852 | 3.4:-99534153 | None:intergenic |
AATGAAGTTGGAAGAGAAAC+AGG | 0.271425 | 3.4:+99533848 | MS.gene063149:CDS |
TCGTTGCTCATTCCATCTTC+AGG | 0.330037 | 3.4:-99534062 | None:intergenic |
CGAGGTTTCGCGGTTGGTCC+TGG | 0.365762 | 3.4:+99533549 | MS.gene063149:CDS |
GAAAGCTTGCAAATTTGTTT+CGG | 0.373892 | 3.4:+99533436 | MS.gene063149:CDS |
GTGATAACGATAAGAGTAAG+AGG | 0.395005 | 3.4:+99533994 | MS.gene063149:CDS |
ATCACACTCATTGCTCAATC+TGG | 0.416349 | 3.4:+99533603 | MS.gene063149:CDS |
TGGAAGTGAAGGGATATAGA+AGG | 0.441385 | 3.4:+99533892 | MS.gene063149:CDS |
AAAGTTGAGAACAACGTAAA+GGG | 0.443322 | 3.4:+99533753 | MS.gene063149:CDS |
TCAAAGCCAACGGTAGTTGT+TGG | 0.443920 | 3.4:-99533506 | None:intergenic |
AGATGATAATAGAATGAAGT+TGG | 0.450200 | 3.4:+99533836 | MS.gene063149:CDS |
AGTTTATTATATCCTGAAGA+TGG | 0.470634 | 3.4:+99534050 | MS.gene063149:CDS |
AGAGATGGGTTTGGAAGTGA+AGG | 0.496963 | 3.4:+99533881 | MS.gene063149:CDS |
GGGATATAGAAGGTGTCAAT+CGG | 0.514951 | 3.4:+99533902 | MS.gene063149:CDS |
TTCATTCCAACAACTACCGT+TGG | 0.531596 | 3.4:+99533500 | MS.gene063149:CDS |
AAAAGTTGAGAACAACGTAA+AGG | 0.543362 | 3.4:+99533752 | MS.gene063149:CDS |
TAGAATAAACGATGGATGCA+TGG | 0.556637 | 3.4:+99533779 | MS.gene063149:CDS |
CTCGAGTTCTTCAAAGCCAA+CGG | 0.560967 | 3.4:-99533516 | None:intergenic |
ATCGGAAATTGAGTTGGTGA+GGG | 0.576160 | 3.4:+99533920 | MS.gene063149:CDS |
AACATGTATCAGAAAATCCA+AGG | 0.585434 | 3.4:+99533705 | MS.gene063149:CDS |
AGGATCAAAGAGTGCTGCAA+AGG | 0.598659 | 3.4:+99533964 | MS.gene063149:CDS |
AATCGGAAATTGAGTTGGTG+AGG | 0.606720 | 3.4:+99533919 | MS.gene063149:CDS |
GTGTCAATCGGAAATTGAGT+TGG | 0.619603 | 3.4:+99533914 | MS.gene063149:CDS |
TCTTGCAATAAATGCCTCCA+CGG | 0.627372 | 3.4:-99534099 | None:intergenic |
TGTGAATAGTGATGATGTGA+AGG | 0.638060 | 3.4:+99533944 | MS.gene063149:CDS |
GAGATGGGTTTGGAAGTGAA+GGG | 0.651077 | 3.4:+99533882 | MS.gene063149:CDS |
TCGGAAATTGAGTTGGTGAG+GGG | 0.662410 | 3.4:+99533921 | MS.gene063149:CDS |
CGAATTTCGTCGCACCGTGG+AGG | 0.663215 | 3.4:+99534085 | MS.gene063149:CDS |
AAGGGTCGTAGAATAAACGA+TGG | 0.676337 | 3.4:+99533771 | MS.gene063149:CDS |
CGACGAATTTCGTCGCACCG+TGG | 0.721139 | 3.4:+99534082 | MS.gene063149:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | AGATGATAATAGAATGAAGT+TGG | + | chr3.4:99533836-99533855 | MS.gene063149:CDS | 25.0% |
! | AGTTTATTATATCCTGAAGA+TGG | + | chr3.4:99534050-99534069 | MS.gene063149:CDS | 25.0% |
!!! | TTGTGTTGATTTTGATTTCA+AGG | + | chr3.4:99533475-99533494 | MS.gene063149:CDS | 25.0% |
AAAAGTTGAGAACAACGTAA+AGG | + | chr3.4:99533752-99533771 | MS.gene063149:CDS | 30.0% | |
AAAGTTGAGAACAACGTAAA+GGG | + | chr3.4:99533753-99533772 | MS.gene063149:CDS | 30.0% | |
AACATGTATCAGAAAATCCA+AGG | + | chr3.4:99533705-99533724 | MS.gene063149:CDS | 30.0% | |
! | GAAAGCTTGCAAATTTGTTT+CGG | + | chr3.4:99533436-99533455 | MS.gene063149:CDS | 30.0% |
!! | ACGATGTTTTTGAACTTTGT+TGG | - | chr3.4:99533409-99533428 | None:intergenic | 30.0% |
!!! | GTTTTTTCTGATCAAAACCT+TGG | - | chr3.4:99533725-99533744 | None:intergenic | 30.0% |
AATGAAGTTGGAAGAGAAAC+AGG | + | chr3.4:99533848-99533867 | MS.gene063149:CDS | 35.0% | |
ACAGGAGATAAAAACAGAGA+TGG | + | chr3.4:99533866-99533885 | MS.gene063149:CDS | 35.0% | |
CAGGAGATAAAAACAGAGAT+GGG | + | chr3.4:99533867-99533886 | MS.gene063149:CDS | 35.0% | |
CCAACAAGAAAAACAAAACC+AGG | - | chr3.4:99533570-99533589 | None:intergenic | 35.0% | |
TAGAATAAACGATGGATGCA+TGG | + | chr3.4:99533779-99533798 | MS.gene063149:CDS | 35.0% | |
! | AACTCGAGTGAATATTTTCG+AGG | + | chr3.4:99533531-99533550 | MS.gene063149:CDS | 35.0% |
! | GATAAAAACAGAGATGGGTT+TGG | + | chr3.4:99533872-99533891 | MS.gene063149:CDS | 35.0% |
! | GTGATAACGATAAGAGTAAG+AGG | + | chr3.4:99533994-99534013 | MS.gene063149:CDS | 35.0% |
! | TGTGAATAGTGATGATGTGA+AGG | + | chr3.4:99533944-99533963 | MS.gene063149:CDS | 35.0% |
!! | TGAATATTTTCGAGGTTTCG+CGG | + | chr3.4:99533539-99533558 | MS.gene063149:CDS | 35.0% |
!!! | CCTGGTTTTGTTTTTCTTGT+TGG | + | chr3.4:99533567-99533586 | MS.gene063149:CDS | 35.0% |
AAGGGTCGTAGAATAAACGA+TGG | + | chr3.4:99533771-99533790 | MS.gene063149:CDS | 40.0% | |
ATCACACTCATTGCTCAATC+TGG | + | chr3.4:99533603-99533622 | MS.gene063149:CDS | 40.0% | |
GTGTCAATCGGAAATTGAGT+TGG | + | chr3.4:99533914-99533933 | MS.gene063149:CDS | 40.0% | |
TCTTGCAATAAATGCCTCCA+CGG | - | chr3.4:99534102-99534121 | None:intergenic | 40.0% | |
TGGAAGTGAAGGGATATAGA+AGG | + | chr3.4:99533892-99533911 | MS.gene063149:CDS | 40.0% | |
TTCATTCCAACAACTACCGT+TGG | + | chr3.4:99533500-99533519 | MS.gene063149:CDS | 40.0% | |
!! | AATCGGAAATTGAGTTGGTG+AGG | + | chr3.4:99533919-99533938 | MS.gene063149:CDS | 40.0% |
!! | ATCGGAAATTGAGTTGGTGA+GGG | + | chr3.4:99533920-99533939 | MS.gene063149:CDS | 40.0% |
!! | GGGATATAGAAGGTGTCAAT+CGG | + | chr3.4:99533902-99533921 | MS.gene063149:CDS | 40.0% |
CTCGAGTTCTTCAAAGCCAA+CGG | - | chr3.4:99533519-99533538 | None:intergenic | 45.0% | |
TCAAAGCCAACGGTAGTTGT+TGG | - | chr3.4:99533509-99533528 | None:intergenic | 45.0% | |
TCGTTGCTCATTCCATCTTC+AGG | - | chr3.4:99534065-99534084 | None:intergenic | 45.0% | |
! | AGAGATGGGTTTGGAAGTGA+AGG | + | chr3.4:99533881-99533900 | MS.gene063149:CDS | 45.0% |
! | GAGATGGGTTTGGAAGTGAA+GGG | + | chr3.4:99533882-99533901 | MS.gene063149:CDS | 45.0% |
!! | AGGATCAAAGAGTGCTGCAA+AGG | + | chr3.4:99533964-99533983 | MS.gene063149:CDS | 45.0% |
!! | TATTTTCGAGGTTTCGCGGT+TGG | + | chr3.4:99533543-99533562 | MS.gene063149:CDS | 45.0% |
!! | TCGGAAATTGAGTTGGTGAG+GGG | + | chr3.4:99533921-99533940 | MS.gene063149:CDS | 45.0% |
CGAATTTCGTCGCACCGTGG+AGG | + | chr3.4:99534085-99534104 | MS.gene063149:CDS | 60.0% | |
CGACGAATTTCGTCGCACCG+TGG | + | chr3.4:99534082-99534101 | MS.gene063149:CDS | 60.0% | |
! | CGAGGTTTCGCGGTTGGTCC+TGG | + | chr3.4:99533549-99533568 | MS.gene063149:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 99533366 | 99534166 | 99533366 | ID=MS.gene063149 |
chr3.4 | mRNA | 99533366 | 99534166 | 99533366 | ID=MS.gene063149.t1;Parent=MS.gene063149 |
chr3.4 | exon | 99533366 | 99534166 | 99533366 | ID=MS.gene063149.t1.exon1;Parent=MS.gene063149.t1 |
chr3.4 | CDS | 99533366 | 99534166 | 99533366 | ID=cds.MS.gene063149.t1;Parent=MS.gene063149.t1 |
Gene Sequence |
Protein sequence |