Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057670.t1 | XP_013456534.1 | 95.5 | 289 | 10 | 1 | 125 | 413 | 1 | 286 | 2.00E-152 | 548.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057670.t1 | Q9LIH6 | 63.7 | 311 | 84 | 5 | 125 | 408 | 1 | 309 | 2.2e-99 | 364.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057670.t1 | A0A072UXG8 | 95.5 | 289 | 10 | 1 | 125 | 413 | 1 | 286 | 1.5e-152 | 548.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene057670 | MS.gene08109 | PPI |
| MS.gene05640 | MS.gene057670 | PPI |
| MS.gene057670 | MS.gene04079 | PPI |
| MS.gene057670 | MS.gene04418 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057670.t1 | MTR_4g074330 | 96.491 | 285 | 7 | 1 | 125 | 409 | 1 | 282 | 0.0 | 566 |
| MS.gene057670.t1 | MTR_4g074330 | 89.256 | 121 | 7 | 1 | 1 | 115 | 1 | 121 | 3.04e-66 | 213 |
| MS.gene057670.t1 | MTR_4g074300 | 70.312 | 256 | 68 | 4 | 158 | 409 | 11 | 262 | 1.24e-126 | 367 |
| MS.gene057670.t1 | MTR_4g074300 | 51.648 | 91 | 32 | 3 | 33 | 115 | 13 | 99 | 1.48e-20 | 91.3 |
| MS.gene057670.t1 | MTR_4g074280 | 59.516 | 289 | 85 | 6 | 125 | 409 | 1 | 261 | 7.38e-107 | 317 |
| MS.gene057670.t1 | MTR_4g074280 | 40.741 | 135 | 43 | 6 | 1 | 123 | 1 | 110 | 1.43e-15 | 77.0 |
| MS.gene057670.t1 | MTR_4g077140 | 70.423 | 71 | 20 | 1 | 340 | 409 | 18 | 88 | 4.05e-28 | 107 |
| MS.gene057670.t1 | MTR_4g074270 | 56.716 | 67 | 20 | 1 | 209 | 275 | 1 | 58 | 9.96e-16 | 72.8 |
| MS.gene057670.t1 | MTR_3g063510 | 63.158 | 57 | 20 | 1 | 216 | 271 | 5 | 61 | 2.96e-15 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057670.t1 | AT3G18630 | 62.857 | 315 | 82 | 5 | 125 | 409 | 1 | 310 | 9.85e-131 | 379 |
| MS.gene057670.t1 | AT3G18630 | 40.397 | 151 | 52 | 4 | 1 | 115 | 1 | 149 | 5.86e-19 | 87.8 |
Find 92 sgRNAs with CRISPR-Local
Find 335 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGTTTGGTAAATATATTTA+AGG | 0.196548 | 4.4:-35027293 | MS.gene057670:CDS |
| CTTCTCTTGGGAACCGAAAA+TGG | 0.203935 | 4.4:-35028250 | MS.gene057670:CDS |
| GAAAATGTCAATTAGGGTTT+TGG | 0.241670 | 4.4:+35029770 | None:intergenic |
| ATAGAGGCTTCTTTGGTTGC+AGG | 0.290684 | 4.4:-35024884 | MS.gene057670:intron |
| ATTTAACATACCTTTGTGTT+TGG | 0.293816 | 4.4:+35028026 | None:intergenic |
| ATTTAACATACCTTTGTGTT+TGG | 0.293816 | 4.4:+35029590 | None:intergenic |
| CTCGACCGAAAATGTCAATT+AGG | 0.312851 | 4.4:+35029763 | None:intergenic |
| CGCCATTTCAAGGCTTCTCT+TGG | 0.316552 | 4.4:-35028263 | MS.gene057670:CDS |
| TCTGCGAATAGAGGCTTCTT+TGG | 0.317467 | 4.4:-35024891 | MS.gene057670:CDS |
| AGCAATGGGGCTTTCGTTCT+CGG | 0.323903 | 4.4:-35027341 | MS.gene057670:CDS |
| TTTATCAGAATCTTTAGCTT+CGG | 0.341287 | 4.4:-35029509 | MS.gene057670:intron |
| AATATATTTACCAAACTAGA+TGG | 0.347032 | 4.4:+35027298 | None:intergenic |
| CTAAAAGCTGCACATCCTTC+CGG | 0.361764 | 4.4:-35024918 | MS.gene057670:CDS |
| AGATGGAACTTTGACTCCTT+CGG | 0.363153 | 4.4:+35027315 | None:intergenic |
| TCGACCGAAAATGTCAATTA+GGG | 0.371619 | 4.4:+35029764 | None:intergenic |
| AGTCAAAGTTCCATCTAGTT+TGG | 0.375248 | 4.4:-35027308 | MS.gene057670:CDS |
| GATGGAACTTTGACTCCTTC+GGG | 0.379368 | 4.4:+35027316 | None:intergenic |
| TTATCAGAATCTTTAGCTTC+GGG | 0.385805 | 4.4:-35029508 | MS.gene057670:intron |
| GGTGAGGGTGGAGGAGGAAT+TGG | 0.390446 | 4.4:+35028131 | None:intergenic |
| TTGGTCGATGGTGAGGGTGG+AGG | 0.415705 | 4.4:+35029686 | None:intergenic |
| CATGGACCTGGTCAAGCAAT+GGG | 0.415912 | 4.4:-35027355 | MS.gene057670:CDS |
| CAACCTTAACAGATTGAAAA+GGG | 0.423788 | 4.4:+35027750 | None:intergenic |
| TCCGGTTTGTCTGCGAATAG+AGG | 0.425814 | 4.4:-35024900 | MS.gene057670:CDS |
| GCCTCTATTCGCAGACAAAC+CGG | 0.426563 | 4.4:+35024899 | None:intergenic |
| TGTGAAACTAAAGGAGTTGC+TGG | 0.432165 | 4.4:-35029482 | MS.gene057670:CDS |
| TGTGAAACTAGAGGAGTTGC+TGG | 0.432482 | 4.4:-35027918 | MS.gene057670:CDS |
| TAAGGTTGTGATCCTTGGCC+AGG | 0.434678 | 4.4:-35027735 | MS.gene057670:intron |
| GGAGGAATTGATGTTATCTT+CGG | 0.435000 | 4.4:+35029707 | None:intergenic |
| TCTGTTAAGGTTGTGATCCT+TGG | 0.439448 | 4.4:-35027740 | MS.gene057670:CDS |
| TTGGTCGACGGTGAGGGTGG+AGG | 0.442061 | 4.4:+35028122 | None:intergenic |
| TCTTTCTAAGTTCGTCGAAA+CGG | 0.446573 | 4.4:-35027837 | MS.gene057670:CDS |
| ACAACCTTAACAGATTGAAA+AGG | 0.451725 | 4.4:+35027749 | None:intergenic |
| GTCGATGGTGAGGGTGGAGG+AGG | 0.451989 | 4.4:+35029689 | None:intergenic |
| CGTCGAAACGGAGATTTGTA+AGG | 0.453567 | 4.4:-35027825 | MS.gene057670:CDS |
| ACACAAGACCCGCCATTTCA+AGG | 0.453833 | 4.4:-35028273 | MS.gene057670:intron |
| GCTTGACCAGGTCCATGATA+AGG | 0.465406 | 4.4:+35027361 | None:intergenic |
| TCCCAAGAGAAGCCTTGAAA+TGG | 0.468239 | 4.4:+35028261 | None:intergenic |
| CTGTGAGATTGTCTTGATAA+CGG | 0.470023 | 4.4:+35025332 | None:intergenic |
| CTTGACCAGGTCCATGATAA+GGG | 0.473536 | 4.4:+35027362 | None:intergenic |
| GCCATTTCAAGGCTTCTCTT+GGG | 0.474230 | 4.4:-35028262 | MS.gene057670:CDS |
| TTGCAGAGAGTAGTGAGAGT+GGG | 0.486235 | 4.4:+35028168 | None:intergenic |
| CAAGACAATCTCACAGAAGA+AGG | 0.492173 | 4.4:-35025325 | MS.gene057670:CDS |
| GTCGACGGTGAGGGTGGAGG+AGG | 0.493800 | 4.4:+35028125 | None:intergenic |
| GGTTGTTCGATTCCGTCTCA+TGG | 0.497299 | 4.4:-35027253 | MS.gene057670:CDS |
| GACAAACTTAGAAAGATTAG+CGG | 0.501858 | 4.4:+35029408 | None:intergenic |
| ACTAGAGGAGTTGCTGGTTG+AGG | 0.507619 | 4.4:-35027912 | MS.gene057670:CDS |
| ACTAAAGGAGTTGCTGGTTG+AGG | 0.507619 | 4.4:-35029476 | MS.gene057670:CDS |
| CTTTCGTTCTCGGTTCCCGA+AGG | 0.511044 | 4.4:-35027331 | MS.gene057670:CDS |
| TCGTGGTTGGAAGCTTTACC+TGG | 0.511695 | 4.4:-35027887 | MS.gene057670:CDS |
| TCGTGGTTGGAAGCTTTACC+TGG | 0.511695 | 4.4:-35029451 | MS.gene057670:CDS |
| TTACTGAATGCTGTTCTCAC+AGG | 0.514517 | 4.4:-35025580 | MS.gene057670:intron |
| TCATGGACCTGGTCAAGCAA+TGG | 0.528069 | 4.4:-35027356 | MS.gene057670:CDS |
| GCTGTGGGGAAAGTCTGCTC+AGG | 0.528704 | 4.4:-35025286 | MS.gene057670:CDS |
| TCTTCGGATTTGCAAAGAGT+GGG | 0.530285 | 4.4:+35029723 | None:intergenic |
| AAGGAGCTTAAGCATGACCT+TGG | 0.530389 | 4.4:-35027274 | MS.gene057670:CDS |
| AGGAGTTGTGTTTCTGCTGT+GGG | 0.530443 | 4.4:-35025301 | MS.gene057670:CDS |
| AGTCTGCTCAGGAGAAACTT+AGG | 0.538132 | 4.4:-35025275 | MS.gene057670:intron |
| GGAGGAATTGGTGTTATCCT+CGG | 0.548111 | 4.4:+35028143 | None:intergenic |
| ACCGCAAAATCTGCATCGAA+AGG | 0.553123 | 4.4:-35028053 | MS.gene057670:CDS |
| ATCTTCGGATTTGCAAAGAG+TGG | 0.556060 | 4.4:+35029722 | None:intergenic |
| CAGCAAAATCTGCATCGAAA+GGG | 0.559198 | 4.4:-35029616 | MS.gene057670:CDS |
| CCGCAAAATCTGCATCGAAA+GGG | 0.561494 | 4.4:-35028052 | MS.gene057670:CDS |
| TTCGGGTTCTGTGAAACTAA+AGG | 0.565985 | 4.4:-35029491 | MS.gene057670:CDS |
| ACAGCAAAATCTGCATCGAA+AGG | 0.570485 | 4.4:-35029617 | MS.gene057670:CDS |
| TAGGACCCTTATCATGGACC+TGG | 0.572566 | 4.4:-35027367 | MS.gene057670:CDS |
| ACAATCTCACAGAAGAAGGA+AGG | 0.573808 | 4.4:-35025321 | MS.gene057670:CDS |
| GAAATCCACAAACCTGGCCA+AGG | 0.577320 | 4.4:+35027723 | None:intergenic |
| TTTCAGGCAAACTTAAGCCT+CGG | 0.579732 | 4.4:+35024763 | None:intergenic |
| AAGAGAAGCCTTGAAATGGC+GGG | 0.582567 | 4.4:+35028265 | None:intergenic |
| AAGGAGTTGTGTTTCTGCTG+TGG | 0.588101 | 4.4:-35025302 | MS.gene057670:CDS |
| TAATCTTTCTGAAATTCACC+AGG | 0.592032 | 4.4:+35027869 | None:intergenic |
| TAATCTTTCTGAAATTCACC+AGG | 0.592032 | 4.4:+35029433 | None:intergenic |
| GCTGGTTGAGGAGTCGTGGT+TGG | 0.593704 | 4.4:-35027900 | MS.gene057670:CDS |
| GCTGGTTGAGGAGTCGTGGT+TGG | 0.593704 | 4.4:-35029464 | MS.gene057670:CDS |
| CAAGAGAAGCCTTGAAATGG+CGG | 0.595775 | 4.4:+35028264 | None:intergenic |
| TTGAAGATCAAATGCTGAGG+AGG | 0.603719 | 4.4:+35027788 | None:intergenic |
| TTTGCAGAGAGTAGTGAGAG+TGG | 0.619156 | 4.4:+35028167 | None:intergenic |
| GAAAGCCCCATTGCTTGACC+AGG | 0.619333 | 4.4:+35027349 | None:intergenic |
| CACTACTCTCTGCAAATCCG+AGG | 0.633149 | 4.4:-35028160 | MS.gene057670:CDS |
| TGAATTTCAGAAAGATTATG+CGG | 0.635738 | 4.4:-35027864 | MS.gene057670:CDS |
| AGTTGCTGGTTGAGGAGTCG+TGG | 0.651672 | 4.4:-35027904 | MS.gene057670:CDS |
| TTCGGGTTGTGTGAAACTAG+AGG | 0.652422 | 4.4:-35027927 | MS.gene057670:CDS |
| AGTTGCTGGTTGAGGAGTCG+TGG | 0.664511 | 4.4:-35029468 | MS.gene057670:CDS |
| AACCTTAACAGATTGAAAAG+GGG | 0.670966 | 4.4:+35027751 | None:intergenic |
| CTATTCGCAGACAAACCGGA+AGG | 0.681707 | 4.4:+35024903 | None:intergenic |
| GAAAGGGTTTCCAAACACAA+AGG | 0.683429 | 4.4:-35028036 | MS.gene057670:intron |
| GAAAGGGTTTCCAAACACAA+AGG | 0.683429 | 4.4:-35029600 | MS.gene057670:intron |
| GGAGTTGTGTTTCTGCTGTG+GGG | 0.685248 | 4.4:-35025300 | MS.gene057670:CDS |
| GCATTGAAGATCAAATGCTG+AGG | 0.685846 | 4.4:+35027785 | None:intergenic |
| GAGACGGAATCGAACAACCA+AGG | 0.705829 | 4.4:+35027257 | None:intergenic |
| ATGGACCTGGTCAAGCAATG+GGG | 0.710880 | 4.4:-35027354 | MS.gene057670:CDS |
| TAGGCAGGCATTCATGACCG+AGG | 0.719887 | 4.4:-35024780 | MS.gene057670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATTATCTTAGAAT+TGG | - | chr4.4:35028347-35028366 | MS.gene057670:intron | 10.0% |
| !!! | TATAACTTTATTTTATCTTT+TGG | - | chr4.4:35027063-35027082 | MS.gene057670:intron | 10.0% |
| !!! | TTGAAAAAAATATTTTATAG+AGG | + | chr4.4:35025631-35025650 | None:intergenic | 10.0% |
| !!! | TTTTTATTAAACAGTAATAT+AGG | - | chr4.4:35028789-35028808 | MS.gene057670:intron | 10.0% |
| !! | AATTGAATGTATATAAAAAG+TGG | + | chr4.4:35026001-35026020 | None:intergenic | 15.0% |
| !! | ACAAAAAAAAATTCTCAAAA+GGG | - | chr4.4:35026060-35026079 | MS.gene057670:intron | 15.0% |
| !! | ATCAATTTAAAAGATTGAAA+AGG | + | chr4.4:35025251-35025270 | None:intergenic | 15.0% |
| !! | TAGTTTGGTAAATATATTTA+AGG | - | chr4.4:35027268-35027287 | MS.gene057670:CDS | 15.0% |
| !! | TCAATTTAAAAGATTGAAAA+GGG | + | chr4.4:35025250-35025269 | None:intergenic | 15.0% |
| !!! | AAAGTTTTAACTTAATTTCA+GGG | - | chr4.4:35028951-35028970 | MS.gene057670:intron | 15.0% |
| !!! | ATCTATATGTATTTTTATAG+AGG | - | chr4.4:35025728-35025747 | MS.gene057670:intron | 15.0% |
| !!! | ATGGTTTTCTTAAATTAAAT+AGG | - | chr4.4:35029528-35029547 | MS.gene057670:intron | 15.0% |
| !!! | GATTTTATCATATTATTTGT+AGG | + | chr4.4:35025367-35025386 | None:intergenic | 15.0% |
| !!! | TGGTTTTCTTAAATTAAATA+GGG | - | chr4.4:35029529-35029548 | MS.gene057670:intron | 15.0% |
| !! | AATATATTTACCAAACTAGA+TGG | + | chr4.4:35027266-35027285 | None:intergenic | 20.0% |
| !! | AATTGAATGTATCTAAAAAG+TGG | - | chr4.4:35026132-35026151 | MS.gene057670:intron | 20.0% |
| !! | ACAAATTCAATCAATGATTT+GGG | + | chr4.4:35025434-35025453 | None:intergenic | 20.0% |
| !! | ATAATAATGAGGAAGATAAA+TGG | - | chr4.4:35027816-35027835 | MS.gene057670:CDS | 20.0% |
| !! | ATAATTTATTATGCTGGTAT+AGG | - | chr4.4:35029718-35029737 | MS.gene057670:CDS | 20.0% |
| !! | ATACATTCAATTAATGTAGT+TGG | - | chr4.4:35026009-35026028 | MS.gene057670:intron | 20.0% |
| !! | CAATTTAAAAGATTGAAAAG+GGG | + | chr4.4:35025249-35025268 | None:intergenic | 20.0% |
| !! | CTGAAATTAAGTTAAAACTT+TGG | + | chr4.4:35028952-35028971 | None:intergenic | 20.0% |
| !! | GACAAAAAAAAATTCTCAAA+AGG | - | chr4.4:35026059-35026078 | MS.gene057670:intron | 20.0% |
| !! | TAATAATGAGGAAGATAAAT+GGG | - | chr4.4:35027817-35027836 | MS.gene057670:CDS | 20.0% |
| !! | TACAAATTCAATCAATGATT+TGG | + | chr4.4:35025435-35025454 | None:intergenic | 20.0% |
| !! | TATTTACAAAGATTGCAATA+TGG | - | chr4.4:35027586-35027605 | MS.gene057670:intron | 20.0% |
| !! | TTTGAATGTATATTAGTGAT+CGG | + | chr4.4:35025975-35025994 | None:intergenic | 20.0% |
| !!! | AATTTGCATTTTTGAGAAAT+AGG | - | chr4.4:35029442-35029461 | MS.gene057670:CDS | 20.0% |
| !!! | AGGAGTTTTTAATCAAAATA+TGG | - | chr4.4:35028030-35028049 | MS.gene057670:intron | 20.0% |
| !!! | ATTTTGATTATTTGATATCG+TGG | - | chr4.4:35028477-35028496 | MS.gene057670:intron | 20.0% |
| !!! | CAAAGTTTTAACTTAATTTC+AGG | - | chr4.4:35028950-35028969 | MS.gene057670:intron | 20.0% |
| !!! | CTCGAAAAAATATTTTATAG+AGG | - | chr4.4:35025547-35025566 | MS.gene057670:intron | 20.0% |
| !!! | TGGATCAACAAAATTTTATT+CGG | - | chr4.4:35027850-35027869 | MS.gene057670:CDS | 20.0% |
| !!! | TTGGTTTTGGTTTTTTTTTT+AGG | - | chr4.4:35027175-35027194 | MS.gene057670:intron | 20.0% |
| ! | AAAAAACCAAAACCAAAATC+AGG | + | chr4.4:35027171-35027190 | None:intergenic | 25.0% |
| ! | AAAAACCAAAACCAAAATCA+GGG | + | chr4.4:35027170-35027189 | None:intergenic | 25.0% |
| ! | AAAACAAAATTGAAGTCCTA+AGG | + | chr4.4:35027378-35027397 | None:intergenic | 25.0% |
| ! | AAACAAAATTGAAGTCCTAA+GGG | + | chr4.4:35027377-35027396 | None:intergenic | 25.0% |
| ! | AGCACTATAATTTATTATGC+TGG | - | chr4.4:35029712-35029731 | MS.gene057670:CDS | 25.0% |
| ! | AGGAAAATCCCTTTATATTT+AGG | + | chr4.4:35028843-35028862 | None:intergenic | 25.0% |
| ! | AGTAAGTATACTTATTGAAC+TGG | - | chr4.4:35027523-35027542 | MS.gene057670:intron | 25.0% |
| ! | AGTTTCTGTCCTAAATATAA+AGG | - | chr4.4:35028831-35028850 | MS.gene057670:intron | 25.0% |
| ! | ATATAAGTGCCAAACAATAA+TGG | + | chr4.4:35026242-35026261 | None:intergenic | 25.0% |
| ! | ATATTGAAGCATGAAATGTT+TGG | + | chr4.4:35028518-35028537 | None:intergenic | 25.0% |
| ! | ATTAAGTTAAAACTTTGGTC+AGG | + | chr4.4:35028947-35028966 | None:intergenic | 25.0% |
| ! | ATTTAACATACCTTTGTGTT+TGG | + | chr4.4:35024974-35024993 | None:intergenic | 25.0% |
| ! | CAGATTATTTAACATGTTAG+TGG | - | chr4.4:35028885-35028904 | MS.gene057670:intron | 25.0% |
| ! | GAAGTAAAAGAAAGAGATTT+AGG | + | chr4.4:35027148-35027167 | None:intergenic | 25.0% |
| ! | GTAAGTATACTTATTGAACT+GGG | - | chr4.4:35027524-35027543 | MS.gene057670:intron | 25.0% |
| ! | GTTTCTGTCCTAAATATAAA+GGG | - | chr4.4:35028832-35028851 | MS.gene057670:intron | 25.0% |
| ! | TCATGGTAATCTTGAAAAAT+GGG | - | chr4.4:35027325-35027344 | MS.gene057670:CDS | 25.0% |
| ! | TGAATTTCAGAAAGATTATG+CGG | - | chr4.4:35025133-35025152 | MS.gene057670:intron | 25.0% |
| ! | TGTGATATTAGAAAACTTAG+TGG | - | chr4.4:35028317-35028336 | MS.gene057670:intron | 25.0% |
| ! | TTAAGTTAAAACTTTGGTCA+GGG | + | chr4.4:35028946-35028965 | None:intergenic | 25.0% |
| ! | TTCAATAAGTATACTTACTG+AGG | + | chr4.4:35027522-35027541 | None:intergenic | 25.0% |
| ! | TTTCTCAATCCATTATTGTT+TGG | - | chr4.4:35026230-35026249 | MS.gene057670:intron | 25.0% |
| !! | AAAACCCTAATTGACATTTT+CGG | - | chr4.4:35024793-35024812 | MS.gene057670:intron | 25.0% |
| !! | CTTGTTATAGTGTTAAACAA+TGG | + | chr4.4:35029317-35029336 | None:intergenic | 25.0% |
| !! | TCAAAAGGGTCTTATAATTA+GGG | - | chr4.4:35026074-35026093 | MS.gene057670:intron | 25.0% |
| !! | TTTATCAGAATCTTTAGCTT+CGG | - | chr4.4:35025052-35025071 | MS.gene057670:intron | 25.0% |
| !! | TTTTAATGCGTTTTTCCATA+AGG | - | chr4.4:35027441-35027460 | MS.gene057670:intron | 25.0% |
| !!! | GATTCCATATTTGGTTTTTA+AGG | + | chr4.4:35029340-35029359 | None:intergenic | 25.0% |
| !!! | TTTTTCAGAATCTTTAGCTT+CGG | - | chr4.4:35026616-35026635 | MS.gene057670:intron | 25.0% |
| AACCTTAACAGATTGAAAAG+GGG | + | chr4.4:35026813-35026832 | None:intergenic | 30.0% | |
| AAGGACAATATTTGTAAGAG+AGG | - | chr4.4:35028010-35028029 | MS.gene057670:intron | 30.0% | |
| AATATGGTTCATTGTGTTGT+TGG | - | chr4.4:35028046-35028065 | MS.gene057670:CDS | 30.0% | |
| AATGTAGTTGGAAATAGCAA+AGG | - | chr4.4:35026021-35026040 | MS.gene057670:intron | 30.0% | |
| AATGTATATTAGTGATCGGA+GGG | + | chr4.4:35025971-35025990 | None:intergenic | 30.0% | |
| ACAACCTTAACAGATTGAAA+AGG | + | chr4.4:35026815-35026834 | None:intergenic | 30.0% | |
| AGAAGCTACTAAAAAACTGT+TGG | - | chr4.4:35028444-35028463 | MS.gene057670:intron | 30.0% | |
| ATAATACACCAAACATAGTG+AGG | + | chr4.4:35029113-35029132 | None:intergenic | 30.0% | |
| ATGTAGTTGGAAATAGCAAA+GGG | - | chr4.4:35026022-35026041 | MS.gene057670:intron | 30.0% | |
| ATTGAGCAATTAAAGCATAC+AGG | - | chr4.4:35028650-35028669 | MS.gene057670:intron | 30.0% | |
| ATTGATGTCGATCTTTCAAT+AGG | - | chr4.4:35025459-35025478 | MS.gene057670:intron | 30.0% | |
| ATTGCAATATGGCACTAAAA+TGG | - | chr4.4:35027597-35027616 | MS.gene057670:intron | 30.0% | |
| CAACCTTAACAGATTGAAAA+GGG | + | chr4.4:35026814-35026833 | None:intergenic | 30.0% | |
| CAAGCCTTAAAAACCAAATA+TGG | - | chr4.4:35029333-35029352 | MS.gene057670:intron | 30.0% | |
| CAGAATTCTACGAAACTTTA+CGG | + | chr4.4:35025757-35025776 | None:intergenic | 30.0% | |
| CTCATGGTAATCTTGAAAAA+TGG | - | chr4.4:35027324-35027343 | MS.gene057670:CDS | 30.0% | |
| GAAGCTACTAAAAAACTGTT+GGG | - | chr4.4:35028445-35028464 | MS.gene057670:intron | 30.0% | |
| GACAAACTTAGAAAGATTAG+CGG | + | chr4.4:35025156-35025175 | None:intergenic | 30.0% | |
| GCAAATTCTCATTCCAAAAA+AGG | - | chr4.4:35029186-35029205 | MS.gene057670:intron | 30.0% | |
| GCTTTGTGTATATATCAAGT+AGG | - | chr4.4:35029762-35029781 | MS.gene057670:CDS | 30.0% | |
| GGGGTTAAAAGATAATAATG+AGG | - | chr4.4:35027805-35027824 | MS.gene057670:CDS | 30.0% | |
| TAATACACCAAACATAGTGA+GGG | + | chr4.4:35029112-35029131 | None:intergenic | 30.0% | |
| TATAGGCTTCTTATGAAGTT+AGG | - | chr4.4:35028806-35028825 | MS.gene057670:intron | 30.0% | |
| TCGTTGTATGCTATTAACTT+AGG | + | chr4.4:35025337-35025356 | None:intergenic | 30.0% | |
| TGAAAACAAAGTTGCTACAA+AGG | - | chr4.4:35027991-35028010 | MS.gene057670:intron | 30.0% | |
| TTCCAATCTGATGTTCAAAA+TGG | - | chr4.4:35029509-35029528 | MS.gene057670:intron | 30.0% | |
| ! | AAAACCCTAATCGACATTTT+TGG | - | chr4.4:35026348-35026367 | MS.gene057670:intron | 30.0% |
| ! | AAAAGAAACGTTTTACCACT+TGG | + | chr4.4:35027561-35027580 | None:intergenic | 30.0% |
| ! | AACCATTTTGAACATCAGAT+TGG | + | chr4.4:35029514-35029533 | None:intergenic | 30.0% |
| ! | CTCAAAAGGGTCTTATAATT+AGG | - | chr4.4:35026073-35026092 | MS.gene057670:intron | 30.0% |
| ! | GAAAATGTCAATTAGGGTTT+TGG | + | chr4.4:35024794-35024813 | None:intergenic | 30.0% |
| ! | GAACTTCTAATCAAGAGTAT+TGG | - | chr4.4:35029024-35029043 | MS.gene057670:intron | 30.0% |
| ! | TTATCAGAATCTTTAGCTTC+GGG | - | chr4.4:35025053-35025072 | MS.gene057670:intron | 30.0% |
| ! | TTATTTCTTACAGCAGATTG+AGG | + | chr4.4:35028577-35028596 | None:intergenic | 30.0% |
| ! | TTCTTTTACTTCCCTGATTT+TGG | - | chr4.4:35027156-35027175 | MS.gene057670:intron | 30.0% |
| !! | AAAAATGTCGATTAGGGTTT+TGG | + | chr4.4:35026349-35026368 | None:intergenic | 30.0% |
| !! | ATAAGTTGGTTATCCAAACA+AGG | - | chr4.4:35027122-35027141 | MS.gene057670:intron | 30.0% |
| !! | ATTCGTCATTTTAGTACATC+TGG | + | chr4.4:35028607-35028626 | None:intergenic | 30.0% |
| !! | CATTTTAGTACATCTGGTTA+TGG | + | chr4.4:35028601-35028620 | None:intergenic | 30.0% |
| !! | TAATCTTTCTGAAATTCACC+AGG | + | chr4.4:35025131-35025150 | None:intergenic | 30.0% |
| !! | TTTTCAAGATTACCATGAGA+CGG | + | chr4.4:35027323-35027342 | None:intergenic | 30.0% |
| !! | TTTTCAGAATCTTTAGCTTC+GGG | - | chr4.4:35026617-35026636 | MS.gene057670:intron | 30.0% |
| !! | TTTTCCATAAGGCACTTATT+GGG | - | chr4.4:35027452-35027471 | MS.gene057670:intron | 30.0% |
| !! | TTTTTCCATAAGGCACTTAT+TGG | - | chr4.4:35027451-35027470 | MS.gene057670:intron | 30.0% |
| !!! | AGCTTTTAGAATGTGATGTT+TGG | + | chr4.4:35029632-35029651 | None:intergenic | 30.0% |
| !!! | TTTTGGAATGAGAATTTGCT+TGG | + | chr4.4:35029185-35029204 | None:intergenic | 30.0% |
| !!! | TTTTTTTAGGACCCTTATCA+TGG | - | chr4.4:35027188-35027207 | MS.gene057670:intron | 30.0% |
| AATCCAAACATGCCCAAATT+AGG | + | chr4.4:35026887-35026906 | None:intergenic | 35.0% | |
| AATCTTTGTGTGAATTGAGG+AGG | - | chr4.4:35027768-35027787 | MS.gene057670:CDS | 35.0% | |
| AATGTCGTGAAGCTCAAATA+TGG | - | chr4.4:35027895-35027914 | MS.gene057670:CDS | 35.0% | |
| ACAAAAGTTCACAATGACAC+AGG | + | chr4.4:35025945-35025964 | None:intergenic | 35.0% | |
| AGCGTTTCATTATCGTGTAA+AGG | - | chr4.4:35028227-35028246 | MS.gene057670:CDS | 35.0% | |
| AGGAATCTTTGTGTGAATTG+AGG | - | chr4.4:35027765-35027784 | MS.gene057670:CDS | 35.0% | |
| AGTCAAAGTTCCATCTAGTT+TGG | - | chr4.4:35027253-35027272 | MS.gene057670:CDS | 35.0% | |
| ATCCAAACATGCCCAAATTA+GGG | + | chr4.4:35026886-35026905 | None:intergenic | 35.0% | |
| ATTACGTACATCAGCTAGTA+TGG | - | chr4.4:35029080-35029099 | MS.gene057670:intron | 35.0% | |
| ATTCTCATTCCAAAAAAGGC+TGG | - | chr4.4:35029190-35029209 | MS.gene057670:intron | 35.0% | |
| CAAATATGGAATCACTGATG+TGG | - | chr4.4:35029347-35029366 | MS.gene057670:intron | 35.0% | |
| CAAATTTCTGCCCCTAATTT+GGG | - | chr4.4:35026872-35026891 | MS.gene057670:intron | 35.0% | |
| CACAAAATAGACGTAGCAAA+CGG | + | chr4.4:35027652-35027671 | None:intergenic | 35.0% | |
| CACATCAGTGATTCCATATT+TGG | + | chr4.4:35029349-35029368 | None:intergenic | 35.0% | |
| CTGTGAGATTGTCTTGATAA+CGG | + | chr4.4:35029232-35029251 | None:intergenic | 35.0% | |
| CTTACAATAGTCACCTTGAT+TGG | - | chr4.4:35029375-35029394 | MS.gene057670:intron | 35.0% | |
| GAATGTATATTAGTGATCGG+AGG | + | chr4.4:35025972-35025991 | None:intergenic | 35.0% | |
| GCGTTTCATTATCGTGTAAA+GGG | - | chr4.4:35028228-35028247 | MS.gene057670:CDS | 35.0% | |
| GCTATAAGCTGAAGATAAGT+TGG | - | chr4.4:35027108-35027127 | MS.gene057670:intron | 35.0% | |
| GGAGGAATTGATGTTATCTT+CGG | + | chr4.4:35024857-35024876 | None:intergenic | 35.0% | |
| GTGTTCTTAATCATCTTGTG+CGG | + | chr4.4:35025523-35025542 | None:intergenic | 35.0% | |
| TCAAATTTCTGCCCCTAATT+TGG | - | chr4.4:35026871-35026890 | MS.gene057670:intron | 35.0% | |
| TCGACCGAAAATGTCAATTA+GGG | + | chr4.4:35024800-35024819 | None:intergenic | 35.0% | |
| TCTTTCTAAGTTCGTCGAAA+CGG | - | chr4.4:35026724-35026743 | MS.gene057670:intron | 35.0% | |
| TGAATACTATACTCAGTGCT+CGG | - | chr4.4:35028383-35028402 | MS.gene057670:intron | 35.0% | |
| TGCTTATATTAGTGACCAGA+GGG | - | chr4.4:35026160-35026179 | MS.gene057670:intron | 35.0% | |
| TGGGTTAATAATGAACCAAG+TGG | - | chr4.4:35027543-35027562 | MS.gene057670:intron | 35.0% | |
| TGTAGTTGGAAATAGCAAAG+GGG | - | chr4.4:35026023-35026042 | MS.gene057670:intron | 35.0% | |
| TGTCGAAACAGAGATTTGTA+AGG | - | chr4.4:35025172-35025191 | MS.gene057670:intron | 35.0% | |
| TGTGTATATATCAAGTAGGC+AGG | - | chr4.4:35029766-35029785 | MS.gene057670:CDS | 35.0% | |
| TTATGAGCTTGTACATACAC+AGG | - | chr4.4:35029593-35029612 | MS.gene057670:intron | 35.0% | |
| TTCGGTAAGTAGCTCATATA+AGG | - | chr4.4:35027868-35027887 | MS.gene057670:CDS | 35.0% | |
| TTCTCATTCCAAAAAAGGCT+GGG | - | chr4.4:35029191-35029210 | MS.gene057670:intron | 35.0% | |
| TTGAAAATCAAATGCTGAGG+AGG | + | chr4.4:35025212-35025231 | None:intergenic | 35.0% | |
| TTGCTTATATTAGTGACCAG+AGG | - | chr4.4:35026159-35026178 | MS.gene057670:intron | 35.0% | |
| ! | AAGGGTCTTATAATTAGGGA+CGG | - | chr4.4:35026078-35026097 | MS.gene057670:intron | 35.0% |
| ! | AGCAAAGGGGTCTTATAAAA+AGG | - | chr4.4:35026036-35026055 | MS.gene057670:intron | 35.0% |
| ! | AGTTGTGATTTTACGCGTTT+CGG | + | chr4.4:35025810-35025829 | None:intergenic | 35.0% |
| ! | CTGACTTTGAAAACCAATCA+AGG | + | chr4.4:35029391-35029410 | None:intergenic | 35.0% |
| ! | CTTTTATAACATACACCCTC+TGG | + | chr4.4:35026178-35026197 | None:intergenic | 35.0% |
| ! | GATAAATGGGTTTAGATGGA+TGG | - | chr4.4:35027830-35027849 | MS.gene057670:CDS | 35.0% |
| ! | GCAAAGGGGTCTTATAAAAA+GGG | - | chr4.4:35026037-35026056 | MS.gene057670:intron | 35.0% |
| ! | GGAAGATAAATGGGTTTAGA+TGG | - | chr4.4:35027826-35027845 | MS.gene057670:CDS | 35.0% |
| ! | GGTTCTTTTCTTTTCTTGCT+TGG | - | chr4.4:35029550-35029569 | MS.gene057670:intron | 35.0% |
| ! | TACCCCTTTTCAATCTGTTA+AGG | - | chr4.4:35026808-35026827 | MS.gene057670:intron | 35.0% |
| ! | TCGACCAAAAATGTCGATTA+GGG | + | chr4.4:35026355-35026374 | None:intergenic | 35.0% |
| ! | TGTTCTTTTTGGATAAAGCG+AGG | + | chr4.4:35024927-35024946 | None:intergenic | 35.0% |
| ! | TTGTATTTGGGTTATCTGGA+AGG | - | chr4.4:35028263-35028282 | MS.gene057670:CDS | 35.0% |
| !! | AAAGAGATTTAGGCCTTGTT+TGG | + | chr4.4:35027138-35027157 | None:intergenic | 35.0% |
| !! | AACTAGCTTTCAATTCAGTC+AGG | - | chr4.4:35029154-35029173 | MS.gene057670:intron | 35.0% |
| !! | AATGTCAATTAGGGTTTTGG+AGG | + | chr4.4:35024791-35024810 | None:intergenic | 35.0% |
| !! | ATTATCGTGTAAAGGGTGTT+TGG | - | chr4.4:35028235-35028254 | MS.gene057670:CDS | 35.0% |
| !! | ATTCCATGATAGAGAGTATC+TGG | + | chr4.4:35028710-35028729 | None:intergenic | 35.0% |
| !! | GCTTTGAAAATCAAATGCTG+AGG | + | chr4.4:35025215-35025234 | None:intergenic | 35.0% |
| !! | GGTTTTTGTTGTGTTCGATT+CGG | + | chr4.4:35024906-35024925 | None:intergenic | 35.0% |
| !! | GTTTTTGTTGTGTTCGATTC+GGG | + | chr4.4:35024905-35024924 | None:intergenic | 35.0% |
| !!! | AAATTGTTCCCAGCCTTTTT+TGG | + | chr4.4:35029202-35029221 | None:intergenic | 35.0% |
| !!! | GCAGATTTTGCTGTTCTTTT+TGG | + | chr4.4:35024938-35024957 | None:intergenic | 35.0% |
| !!! | GTTCATTGTGTTGTTGGTTT+TGG | - | chr4.4:35028052-35028071 | MS.gene057670:CDS | 35.0% |
| !!! | TACTTCCCTGATTTTGGTTT+TGG | - | chr4.4:35027162-35027181 | MS.gene057670:intron | 35.0% |
| AATCAATCTCCAAGCAAGCA+AGG | + | chr4.4:35027972-35027991 | None:intergenic | 40.0% | |
| AATGACCAAATTACTCCCAG+CGG | + | chr4.4:35025920-35025939 | None:intergenic | 40.0% | |
| ACAATCTCACAGAAGAAGGA+AGG | - | chr4.4:35029240-35029259 | MS.gene057670:intron | 40.0% | |
| ACAATGAGTCAATGAGCTAG+AGG | + | chr4.4:35028863-35028882 | None:intergenic | 40.0% | |
| ACAGCAAAATCTGCATCGAA+AGG | - | chr4.4:35024944-35024963 | MS.gene057670:CDS | 40.0% | |
| AGATGGAACTTTGACTCCTT+CGG | + | chr4.4:35027249-35027268 | None:intergenic | 40.0% | |
| AGGAGGTTGCTAGAAAATGT+GGG | - | chr4.4:35027785-35027804 | MS.gene057670:CDS | 40.0% | |
| AGGCACTTATTGGGTTTGTA+TGG | - | chr4.4:35027461-35027480 | MS.gene057670:intron | 40.0% | |
| ATCTTCGGATTTGCAAAGAG+TGG | + | chr4.4:35024842-35024861 | None:intergenic | 40.0% | |
| CAAACCCAATAAGTGCCTTA+TGG | + | chr4.4:35027459-35027478 | None:intergenic | 40.0% | |
| CAAATCGAAATCCACAAACC+TGG | + | chr4.4:35026847-35026866 | None:intergenic | 40.0% | |
| CAAGACAATCTCACAGAAGA+AGG | - | chr4.4:35029236-35029255 | MS.gene057670:intron | 40.0% | |
| CAGCAAAATCTGCATCGAAA+GGG | - | chr4.4:35024945-35024964 | MS.gene057670:CDS | 40.0% | |
| CAGGTTTGTGGATTTCGATT+TGG | - | chr4.4:35026845-35026864 | MS.gene057670:intron | 40.0% | |
| CATGCAATATGCAAGTGGAT+CGG | - | chr4.4:35028132-35028151 | MS.gene057670:CDS | 40.0% | |
| CTACCAGATACTCTCTATCA+TGG | - | chr4.4:35028704-35028723 | MS.gene057670:intron | 40.0% | |
| CTCGACCGAAAATGTCAATT+AGG | + | chr4.4:35024801-35024820 | None:intergenic | 40.0% | |
| GAAACGCGTAAAATCACAAC+TGG | - | chr4.4:35025809-35025828 | MS.gene057670:intron | 40.0% | |
| GAAAGGGTTTCCAAACACAA+AGG | - | chr4.4:35024961-35024980 | MS.gene057670:intron | 40.0% | |
| GCAATATGGCACTAAAATGG+AGG | - | chr4.4:35027600-35027619 | MS.gene057670:intron | 40.0% | |
| GCATTGAAGATCAAATGCTG+AGG | + | chr4.4:35026779-35026798 | None:intergenic | 40.0% | |
| GGGCATCAACGTTACATATT+CGG | + | chr4.4:35025414-35025433 | None:intergenic | 40.0% | |
| TAAGCTGAGCAAGTTAAGAG+CGG | - | chr4.4:35027673-35027692 | MS.gene057670:intron | 40.0% | |
| TCCAAACATGCCCAAATTAG+GGG | + | chr4.4:35026885-35026904 | None:intergenic | 40.0% | |
| TCTGTTAAGGTTGTGATCCT+TGG | - | chr4.4:35026821-35026840 | MS.gene057670:intron | 40.0% | |
| TCTTCGGATTTGCAAAGAGT+GGG | + | chr4.4:35024841-35024860 | None:intergenic | 40.0% | |
| TGTGAAACTAAAGGAGTTGC+TGG | - | chr4.4:35025079-35025098 | MS.gene057670:intron | 40.0% | |
| TTAATTGCCTCTGGCATATC+CGG | + | chr4.4:35025894-35025913 | None:intergenic | 40.0% | |
| TTACTGAATGCTGTTCTCAC+AGG | - | chr4.4:35028981-35029000 | MS.gene057670:intron | 40.0% | |
| TTCTTTGGTTGCAGGTAAGA+TGG | - | chr4.4:35029685-35029704 | MS.gene057670:CDS | 40.0% | |
| TTGAAGATCAAATGCTGAGG+AGG | + | chr4.4:35026776-35026795 | None:intergenic | 40.0% | |
| TTTGGCATGCAATATGCAAG+TGG | - | chr4.4:35028127-35028146 | MS.gene057670:CDS | 40.0% | |
| ! | AGCACTTTGACTAATTTGCC+GGG | - | chr4.4:35028187-35028206 | MS.gene057670:CDS | 40.0% |
| ! | CTCGACCAAAAATGTCGATT+AGG | + | chr4.4:35026356-35026375 | None:intergenic | 40.0% |
| ! | GAGCACTTTGACTAATTTGC+CGG | - | chr4.4:35028186-35028205 | MS.gene057670:CDS | 40.0% |
| ! | GCAGATTTTGCGGTTCTTTT+TGG | + | chr4.4:35026502-35026521 | None:intergenic | 40.0% |
| ! | GTCAGATGTTTGCTAGTGTT+TGG | - | chr4.4:35028109-35028128 | MS.gene057670:CDS | 40.0% |
| ! | TCGCTTGTATTTGGGTTATC+TGG | - | chr4.4:35028259-35028278 | MS.gene057670:CDS | 40.0% |
| ! | TGTGTTGATATGCTACCCTT+AGG | - | chr4.4:35027359-35027378 | MS.gene057670:CDS | 40.0% |
| ! | TGTTTGGCTCGCTTGTATTT+GGG | - | chr4.4:35028251-35028270 | MS.gene057670:CDS | 40.0% |
| ! | TTCGGGTTCTGTGAAACTAA+AGG | - | chr4.4:35025070-35025089 | MS.gene057670:intron | 40.0% |
| !! | AATGTCGATTAGGGTTTTGG+AGG | + | chr4.4:35026346-35026365 | None:intergenic | 40.0% |
| !! | AGCAAGTTAAGAGCGGATTT+TGG | - | chr4.4:35027680-35027699 | MS.gene057670:intron | 40.0% |
| !! | TGTGTTCGATTCGCGATTTT+TGG | + | chr4.4:35024897-35024916 | None:intergenic | 40.0% |
| !!! | AATTAGGGTTTTGGAGGATG+CGG | + | chr4.4:35024785-35024804 | None:intergenic | 40.0% |
| !!! | CATTGTGTTGTTGGTTTTGG+TGG | - | chr4.4:35028055-35028074 | MS.gene057670:CDS | 40.0% |
| !!! | TGTGTTCGATTCGGGATTTT+TGG | + | chr4.4:35026461-35026480 | None:intergenic | 40.0% |
| AACTACCGCTGGGAGTAATT+TGG | - | chr4.4:35025912-35025931 | MS.gene057670:intron | 45.0% | |
| AAGAGAAGCCTTGAAATGGC+GGG | + | chr4.4:35026299-35026318 | None:intergenic | 45.0% | |
| AAGGAGCTTAAGCATGACCT+TGG | - | chr4.4:35027287-35027306 | MS.gene057670:CDS | 45.0% | |
| ACCGCAAAATCTGCATCGAA+AGG | - | chr4.4:35026508-35026527 | MS.gene057670:intron | 45.0% | |
| ACGTACATCAGCTAGTATGG+AGG | - | chr4.4:35029083-35029102 | MS.gene057670:intron | 45.0% | |
| AGAGGCAATTAACTACCGCT+GGG | - | chr4.4:35025902-35025921 | MS.gene057670:intron | 45.0% | |
| AGTCTGCTCAGGAGAAACTT+AGG | - | chr4.4:35029286-35029305 | MS.gene057670:intron | 45.0% | |
| ATAGAGGCTTCTTTGGTTGC+AGG | - | chr4.4:35029677-35029696 | MS.gene057670:CDS | 45.0% | |
| CAAGAGAAGCCTTGAAATGG+CGG | + | chr4.4:35026300-35026319 | None:intergenic | 45.0% | |
| CCGCAAAATCTGCATCGAAA+GGG | - | chr4.4:35026509-35026528 | MS.gene057670:intron | 45.0% | |
| CGTCGAAACGGAGATTTGTA+AGG | - | chr4.4:35026736-35026755 | MS.gene057670:intron | 45.0% | |
| CTAAAAGCTGCACATCCTTC+CGG | - | chr4.4:35029643-35029662 | MS.gene057670:CDS | 45.0% | |
| CTTCTCTTGGGAACCGAAAA+TGG | - | chr4.4:35026311-35026330 | MS.gene057670:intron | 45.0% | |
| CTTGACCAGGTCCATGATAA+GGG | + | chr4.4:35027202-35027221 | None:intergenic | 45.0% | |
| GAGGAGGTTGCTAGAAAATG+TGG | - | chr4.4:35027784-35027803 | MS.gene057670:CDS | 45.0% | |
| GATGGAACTTTGACTCCTTC+GGG | + | chr4.4:35027248-35027267 | None:intergenic | 45.0% | |
| GCCATTTCAAGGCTTCTCTT+GGG | - | chr4.4:35026299-35026318 | MS.gene057670:intron | 45.0% | |
| GGAGGTTGCTAGAAAATGTG+GGG | - | chr4.4:35027786-35027805 | MS.gene057670:CDS | 45.0% | |
| GGAGTTATATCATGGGGAGA+AGG | - | chr4.4:35027745-35027764 | MS.gene057670:CDS | 45.0% | |
| GGTGTGGGGAGTTATATCAT+GGG | - | chr4.4:35027738-35027757 | MS.gene057670:CDS | 45.0% | |
| GTGTGGGGAGTTATATCATG+GGG | - | chr4.4:35027739-35027758 | MS.gene057670:CDS | 45.0% | |
| GTTATCTGGAAGGCGAGAAA+TGG | - | chr4.4:35028273-35028292 | MS.gene057670:intron | 45.0% | |
| TACTATACTCAGTGCTCGGA+TGG | - | chr4.4:35028387-35028406 | MS.gene057670:intron | 45.0% | |
| TCCCAAGAGAAGCCTTGAAA+TGG | + | chr4.4:35026303-35026322 | None:intergenic | 45.0% | |
| TCTGCGAATAGAGGCTTCTT+TGG | - | chr4.4:35029670-35029689 | MS.gene057670:CDS | 45.0% | |
| TGAAGAGGTGGGATTTGAGA+TGG | - | chr4.4:35027717-35027736 | MS.gene057670:intron | 45.0% | |
| TGGTGTGGGGAGTTATATCA+TGG | - | chr4.4:35027737-35027756 | MS.gene057670:CDS | 45.0% | |
| TGTGAAACTAGAGGAGTTGC+TGG | - | chr4.4:35026643-35026662 | MS.gene057670:intron | 45.0% | |
| TTGCAGAGAGTAGTGAGAGT+GGG | + | chr4.4:35026396-35026415 | None:intergenic | 45.0% | |
| TTTGCAGAGAGTAGTGAGAG+TGG | + | chr4.4:35026397-35026416 | None:intergenic | 45.0% | |
| ! | AAGGAGTTGTGTTTCTGCTG+TGG | - | chr4.4:35029259-35029278 | MS.gene057670:intron | 45.0% |
| ! | ACTAAAGGAGTTGCTGGTTG+AGG | - | chr4.4:35025085-35025104 | MS.gene057670:intron | 45.0% |
| ! | AGGAGTTGTGTTTCTGCTGT+GGG | - | chr4.4:35029260-35029279 | MS.gene057670:intron | 45.0% |
| ! | CCCTTTCGATGCAGATTTTG+CGG | + | chr4.4:35024948-35024967 | None:intergenic | 45.0% |
| ! | GGTCTTATAATTAGGGACGG+AGG | - | chr4.4:35026081-35026100 | MS.gene057670:intron | 45.0% |
| ! | GGTTCTTTTTGGACAAAGCG+AGG | + | chr4.4:35026491-35026510 | None:intergenic | 45.0% |
| ! | GTGTTTGGCTCGCTTGTATT+TGG | - | chr4.4:35028250-35028269 | MS.gene057670:CDS | 45.0% |
| !! | AGAGAGTATCTGGTAGACAG+TGG | + | chr4.4:35028700-35028719 | None:intergenic | 45.0% |
| !! | GACTAATTTGCCGGGTTGAT+CGG | - | chr4.4:35028195-35028214 | MS.gene057670:CDS | 45.0% |
| !! | GGAGGAATTGGTGTTATCCT+CGG | + | chr4.4:35026421-35026440 | None:intergenic | 45.0% |
| !! | GTTAAGAGCGGATTTTGGTG+TGG | - | chr4.4:35027685-35027704 | MS.gene057670:intron | 45.0% |
| !! | TCTTGAAAAATGGGCTGTGC+AGG | - | chr4.4:35027334-35027353 | MS.gene057670:CDS | 45.0% |
| !! | TTCGGGTTGTGTGAAACTAG+AGG | - | chr4.4:35026634-35026653 | MS.gene057670:intron | 45.0% |
| !!! | CGATTTTTGGTCGATGGTGA+GGG | + | chr4.4:35024884-35024903 | None:intergenic | 45.0% |
| !!! | GATTAGGGTTTTGGAGGATG+CGG | + | chr4.4:35026340-35026359 | None:intergenic | 45.0% |
| !!! | GATTCGCGATTTTTGGTCGA+TGG | + | chr4.4:35024890-35024909 | None:intergenic | 45.0% |
| !!! | GATTCGGGATTTTTGGTCGA+CGG | + | chr4.4:35026454-35026473 | None:intergenic | 45.0% |
| !!! | TGTTGTTGGTTTTGGTGGAG+AGG | - | chr4.4:35028060-35028079 | MS.gene057670:CDS | 45.0% |
| ACACAAGACCCGCCATTTCA+AGG | - | chr4.4:35026288-35026307 | MS.gene057670:intron | 50.0% | |
| AGCAAGCAAGGAGACATAGG+AGG | + | chr4.4:35027960-35027979 | None:intergenic | 50.0% | |
| AGCAATGGGGCTTTCGTTCT+CGG | - | chr4.4:35027220-35027239 | MS.gene057670:intron | 50.0% | |
| ATGGACCTGGTCAAGCAATG+GGG | - | chr4.4:35027207-35027226 | MS.gene057670:intron | 50.0% | |
| CAAGGAGACATAGGAGGGAA+TGG | + | chr4.4:35027954-35027973 | None:intergenic | 50.0% | |
| CACTACTCTCTGCAAATCCG+AGG | - | chr4.4:35026401-35026420 | MS.gene057670:intron | 50.0% | |
| CAGAGGCAATTAACTACCGC+TGG | - | chr4.4:35025901-35025920 | MS.gene057670:intron | 50.0% | |
| CAGCGGTAGTTAATTGCCTC+TGG | + | chr4.4:35025903-35025922 | None:intergenic | 50.0% | |
| CATGGACCTGGTCAAGCAAT+GGG | - | chr4.4:35027206-35027225 | MS.gene057670:intron | 50.0% | |
| CCAAGCAAGCAAGGAGACAT+AGG | + | chr4.4:35027963-35027982 | None:intergenic | 50.0% | |
| CCTATGTCTCCTTGCTTGCT+TGG | - | chr4.4:35027960-35027979 | MS.gene057670:intron | 50.0% | |
| CGCCATTTCAAGGCTTCTCT+TGG | - | chr4.4:35026298-35026317 | MS.gene057670:intron | 50.0% | |
| CTATTCGCAGACAAACCGGA+AGG | + | chr4.4:35029661-35029680 | None:intergenic | 50.0% | |
| CTCAATCCCTTCATGCTGCA+TGG | + | chr4.4:35028169-35028188 | None:intergenic | 50.0% | |
| GAAATCCACAAACCTGGCCA+AGG | + | chr4.4:35026841-35026860 | None:intergenic | 50.0% | |
| GAGACGGAATCGAACAACCA+AGG | + | chr4.4:35027307-35027326 | None:intergenic | 50.0% | |
| GAGGTGACCCTCACTATGTT+TGG | - | chr4.4:35029102-35029121 | MS.gene057670:intron | 50.0% | |
| GCAAGCAAGGAGACATAGGA+GGG | + | chr4.4:35027959-35027978 | None:intergenic | 50.0% | |
| GCCCCTAATTTGGGCATGTT+TGG | - | chr4.4:35026881-35026900 | MS.gene057670:intron | 50.0% | |
| GCCTCTATTCGCAGACAAAC+CGG | + | chr4.4:35029665-35029684 | None:intergenic | 50.0% | |
| GCTTGACCAGGTCCATGATA+AGG | + | chr4.4:35027203-35027222 | None:intergenic | 50.0% | |
| GGTTGTTCGATTCCGTCTCA+TGG | - | chr4.4:35027308-35027327 | MS.gene057670:CDS | 50.0% | |
| TAAGGTTGTGATCCTTGGCC+AGG | - | chr4.4:35026826-35026845 | MS.gene057670:intron | 50.0% | |
| TAGGACCCTTATCATGGACC+TGG | - | chr4.4:35027194-35027213 | MS.gene057670:intron | 50.0% | |
| TCATGGACCTGGTCAAGCAA+TGG | - | chr4.4:35027205-35027224 | MS.gene057670:intron | 50.0% | |
| TCGTGGTTGGAAGCTTTACC+TGG | - | chr4.4:35025110-35025129 | MS.gene057670:intron | 50.0% | |
| ! | ACTAGAGGAGTTGCTGGTTG+AGG | - | chr4.4:35026649-35026668 | MS.gene057670:intron | 50.0% |
| ! | AGGTGGGATTTGAGATGGTG+TGG | - | chr4.4:35027722-35027741 | MS.gene057670:intron | 50.0% |
| ! | CAAGTGGATCGGAGTTTGCT+TGG | - | chr4.4:35028143-35028162 | MS.gene057670:CDS | 50.0% |
| ! | GGAGTTGTGTTTCTGCTGTG+GGG | - | chr4.4:35029261-35029280 | MS.gene057670:intron | 50.0% |
| ! | GGTGGGATTTGAGATGGTGT+GGG | - | chr4.4:35027723-35027742 | MS.gene057670:intron | 50.0% |
| ! | GTGGGATTTGAGATGGTGTG+GGG | - | chr4.4:35027724-35027743 | MS.gene057670:intron | 50.0% |
| ! | TCCGGTTTGTCTGCGAATAG+AGG | - | chr4.4:35029661-35029680 | MS.gene057670:CDS | 50.0% |
| !! | GAGGATGCGGAAGCCATTTT+CGG | + | chr4.4:35026327-35026346 | None:intergenic | 50.0% |
| !! | TTGAAATGGCGGGTCTTGTG+TGG | + | chr4.4:35026289-35026308 | None:intergenic | 50.0% |
| !! | TTTTTGGTCGATGGTGAGGG+TGG | + | chr4.4:35024881-35024900 | None:intergenic | 50.0% |
| !!! | GCGATTTTTGGTCGATGGTG+AGG | + | chr4.4:35024885-35024904 | None:intergenic | 50.0% |
| !!! | GGATTTTTGGTCGACGGTGA+GGG | + | chr4.4:35026448-35026467 | None:intergenic | 50.0% |
| CAGCGGCAATTAACTGCTGC+CGG | - | chr4.4:35025872-35025891 | MS.gene057670:intron | 55.0% | |
| CTTTCGTTCTCGGTTCCCGA+AGG | - | chr4.4:35027230-35027249 | MS.gene057670:CDS | 55.0% | |
| GAAAGCCCCATTGCTTGACC+AGG | + | chr4.4:35027215-35027234 | None:intergenic | 55.0% | |
| GCTTGGCCATGCAGCATGAA+GGG | - | chr4.4:35028160-35028179 | MS.gene057670:CDS | 55.0% | |
| GGCAGAGGGATTGAAGAGGT+GGG | - | chr4.4:35027706-35027725 | MS.gene057670:intron | 55.0% | |
| GTGATCCTTGGCCAGGTTTG+TGG | - | chr4.4:35026833-35026852 | MS.gene057670:intron | 55.0% | |
| GTGTGGCAGAGGGATTGAAG+AGG | - | chr4.4:35027702-35027721 | MS.gene057670:intron | 55.0% | |
| TAGGCAGGCATTCATGACCG+AGG | - | chr4.4:35029781-35029800 | MS.gene057670:CDS | 55.0% | |
| TCTCCGTCTACCGATCAACC+CGG | + | chr4.4:35028208-35028227 | None:intergenic | 55.0% | |
| TGCTTGGCCATGCAGCATGA+AGG | - | chr4.4:35028159-35028178 | MS.gene057670:CDS | 55.0% | |
| TGGCAGAGGGATTGAAGAGG+TGG | - | chr4.4:35027705-35027724 | MS.gene057670:intron | 55.0% | |
| ! | AGTTGCTGGTTGAGGAGTCG+TGG | - | chr4.4:35025093-35025112 | MS.gene057670:intron | 55.0% |
| !! | AAATGGCGGGTCTTGTGTGG+CGG | + | chr4.4:35026286-35026305 | None:intergenic | 55.0% |
| !! | AGCGGATTTTGGTGTGGCAG+AGG | - | chr4.4:35027691-35027710 | MS.gene057670:intron | 55.0% |
| !! | GCGGATTTTGGTGTGGCAGA+GGG | - | chr4.4:35027692-35027711 | MS.gene057670:intron | 55.0% |
| !! | TTAATTGCCGCTGGCTCCAG+AGG | + | chr4.4:35025865-35025884 | None:intergenic | 55.0% |
| !! | TTGCCGGGTTGATCGGTAGA+CGG | - | chr4.4:35028202-35028221 | MS.gene057670:CDS | 55.0% |
| !! | TTTTTGGTCGACGGTGAGGG+TGG | + | chr4.4:35026445-35026464 | None:intergenic | 55.0% |
| !!! | GGGATTTTTGGTCGACGGTG+AGG | + | chr4.4:35026449-35026468 | None:intergenic | 55.0% |
| ACTGCTGCCGGATATGCCAG+AGG | - | chr4.4:35025884-35025903 | MS.gene057670:intron | 60.0% | |
| CGGCAGCAGTTAATTGCCGC+TGG | + | chr4.4:35025874-35025893 | None:intergenic | 60.0% | |
| GCAGCAAAGCCAACTGCCTC+TGG | - | chr4.4:35025846-35025865 | MS.gene057670:intron | 60.0% | |
| GCTGGTTGAGGAGTCGTGGT+TGG | - | chr4.4:35025097-35025116 | MS.gene057670:intron | 60.0% | |
| GCTGTGGGGAAAGTCTGCTC+AGG | - | chr4.4:35029275-35029294 | MS.gene057670:intron | 60.0% | |
| GGTGAGGGTGGAGGAGGAAT+TGG | + | chr4.4:35024869-35024888 | None:intergenic | 60.0% | |
| TTGGTCGATGGTGAGGGTGG+AGG | + | chr4.4:35024878-35024897 | None:intergenic | 60.0% | |
| !! | AATGGCGGGTCTTGTGTGGC+GGG | + | chr4.4:35026285-35026304 | None:intergenic | 60.0% |
| GTCGATGGTGAGGGTGGAGG+AGG | + | chr4.4:35024875-35024894 | None:intergenic | 65.0% | |
| TTGGTCGACGGTGAGGGTGG+AGG | + | chr4.4:35026442-35026461 | None:intergenic | 65.0% | |
| !! | CCAACTGCCTCTGGAGCCAG+CGG | - | chr4.4:35025855-35025874 | MS.gene057670:intron | 65.0% |
| GTCGACGGTGAGGGTGGAGG+AGG | + | chr4.4:35026439-35026458 | None:intergenic | 70.0% | |
| !! | CCGCTGGCTCCAGAGGCAGT+TGG | + | chr4.4:35025858-35025877 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 35024775 | 35029808 | 35024775 | ID=MS.gene057670 |
| chr4.4 | mRNA | 35024775 | 35029808 | 35024775 | ID=MS.gene057670.t1;Parent=MS.gene057670 |
| chr4.4 | exon | 35029601 | 35029808 | 35029601 | ID=MS.gene057670.t1.exon1;Parent=MS.gene057670.t1 |
| chr4.4 | CDS | 35029601 | 35029808 | 35029601 | ID=cds.MS.gene057670.t1;Parent=MS.gene057670.t1 |
| chr4.4 | exon | 35029395 | 35029523 | 35029395 | ID=MS.gene057670.t1.exon2;Parent=MS.gene057670.t1 |
| chr4.4 | CDS | 35029395 | 35029523 | 35029395 | ID=cds.MS.gene057670.t1;Parent=MS.gene057670.t1 |
| chr4.4 | exon | 35028037 | 35028288 | 35028037 | ID=MS.gene057670.t1.exon3;Parent=MS.gene057670.t1 |
| chr4.4 | CDS | 35028037 | 35028288 | 35028037 | ID=cds.MS.gene057670.t1;Parent=MS.gene057670.t1 |
| chr4.4 | exon | 35027736 | 35027959 | 35027736 | ID=MS.gene057670.t1.exon4;Parent=MS.gene057670.t1 |
| chr4.4 | CDS | 35027736 | 35027959 | 35027736 | ID=cds.MS.gene057670.t1;Parent=MS.gene057670.t1 |
| chr4.4 | exon | 35027228 | 35027386 | 35027228 | ID=MS.gene057670.t1.exon5;Parent=MS.gene057670.t1 |
| chr4.4 | CDS | 35027228 | 35027386 | 35027228 | ID=cds.MS.gene057670.t1;Parent=MS.gene057670.t1 |
| chr4.4 | exon | 35025581 | 35025611 | 35025581 | ID=MS.gene057670.t1.exon6;Parent=MS.gene057670.t1 |
| chr4.4 | CDS | 35025581 | 35025611 | 35025581 | ID=cds.MS.gene057670.t1;Parent=MS.gene057670.t1 |
| chr4.4 | exon | 35025276 | 35025411 | 35025276 | ID=MS.gene057670.t1.exon7;Parent=MS.gene057670.t1 |
| chr4.4 | CDS | 35025276 | 35025411 | 35025276 | ID=cds.MS.gene057670.t1;Parent=MS.gene057670.t1 |
| chr4.4 | exon | 35024885 | 35024968 | 35024885 | ID=MS.gene057670.t1.exon8;Parent=MS.gene057670.t1 |
| chr4.4 | CDS | 35024885 | 35024968 | 35024885 | ID=cds.MS.gene057670.t1;Parent=MS.gene057670.t1 |
| chr4.4 | exon | 35024775 | 35024799 | 35024775 | ID=MS.gene057670.t1.exon9;Parent=MS.gene057670.t1 |
| chr4.4 | CDS | 35024775 | 35024799 | 35024775 | ID=cds.MS.gene057670.t1;Parent=MS.gene057670.t1 |
| Gene Sequence |
| Protein sequence |
