AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058059

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058059.t1 MTR_7g088160 38.486 317 156 6 90 369 72 386 4.76e-62 204
MS.gene058059.t1 MTR_7g107340 40.136 294 138 5 84 369 69 332 4.76e-55 184
MS.gene058059.t1 MTR_4g063670 40.523 306 149 9 91 369 18 317 1.73e-52 177
MS.gene058059.t1 MTR_0867s0010 41.503 306 142 9 93 369 20 317 4.05e-49 168
MS.gene058059.t1 MTR_7g114170 36.390 349 140 9 35 369 7 287 5.74e-40 143
MS.gene058059.t1 MTR_4g083510 37.248 298 155 8 99 369 26 318 1.24e-39 143
MS.gene058059.t1 MTR_3g069460 47.368 152 77 3 94 242 21 172 5.74e-35 127
MS.gene058059.t1 MTR_6g081150 37.288 236 77 8 86 321 12 176 3.37e-32 119
MS.gene058059.t1 MTR_1g051185 46.763 139 70 3 142 278 45 181 2.17e-31 120
MS.gene058059.t1 MTR_7g461350 24.375 160 116 1 88 242 92 251 1.79e-15 77.4
MS.gene058059.t1 MTR_6g016670 24.375 160 116 1 88 242 92 251 1.79e-15 77.4
MS.gene058059.t1 MTR_3g464310 24.375 160 116 1 88 242 92 251 1.79e-15 77.4
MS.gene058059.t1 MTR_3g464170 23.750 160 117 1 88 242 92 251 3.28e-15 76.6
MS.gene058059.t1 MTR_1g100375 23.750 160 117 1 88 242 92 251 3.28e-15 76.6
MS.gene058059.t1 MTR_3g450670 23.718 156 114 1 92 242 92 247 4.00e-15 76.3
MS.gene058059.t1 MTR_1g471070 23.718 156 114 1 92 242 92 247 4.00e-15 76.3
MS.gene058059.t1 MTR_6g051405 23.750 160 117 1 88 242 92 251 4.41e-15 76.3
MS.gene058059.t1 MTR_1g106885 23.832 214 129 3 92 292 113 305 4.43e-15 76.3
MS.gene058059.t1 MTR_2g022120 23.944 213 128 3 93 292 117 308 4.66e-15 76.3
MS.gene058059.t1 MTR_5g077245 24.725 182 124 2 93 261 106 287 7.52e-15 75.5
MS.gene058059.t1 MTR_2g072860 23.750 160 117 1 88 242 24 183 9.26e-15 74.7
MS.gene058059.t1 MTR_6g453050 24.590 183 125 3 92 261 52 234 1.73e-14 73.9
MS.gene058059.t1 MTR_8g015740 40.764 157 63 8 1 154 1 130 1.92e-14 70.1
MS.gene058059.t1 MTR_5g066280 24.126 286 170 6 92 352 52 315 2.30e-14 73.6
MS.gene058059.t1 MTR_4g026120 23.832 214 129 3 92 292 52 244 2.41e-14 73.6
MS.gene058059.t1 MTR_4g036435 23.832 214 129 3 92 292 52 244 2.41e-14 73.6
MS.gene058059.t1 MTR_3g067785 23.832 214 129 3 92 292 52 244 2.98e-14 73.6
MS.gene058059.t1 MTR_4g013220 23.832 214 129 3 92 292 52 244 3.10e-14 73.2
MS.gene058059.t1 MTR_6g092533 24.294 177 126 2 92 260 116 292 3.55e-14 73.6
MS.gene058059.t1 MTR_4g046740 36.522 115 62 3 262 369 24 134 1.57e-13 67.4
MS.gene058059.t1 MTR_2g023560 60.784 51 20 0 118 168 57 107 7.46e-13 65.1
MS.gene058059.t1 MTR_1g075060 26.230 183 108 5 92 261 103 271 4.41e-12 67.0
MS.gene058059.t1 MTR_7g083520 24.503 151 107 2 97 240 31 181 3.20e-11 63.9
MS.gene058059.t1 MTR_7g062380 21.591 176 123 2 116 291 18 178 9.10e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058059.t1 AT5G41220 38.500 200 111 5 115 304 264 461 2.48e-27 113
MS.gene058059.t1 AT5G41220 38.500 200 111 5 115 304 206 403 2.50e-27 113
MS.gene058059.t1 AT5G41220 38.500 200 111 5 115 304 214 411 2.82e-27 113
MS.gene058059.t1 AT5G41240 35.000 200 117 5 115 303 264 461 1.08e-24 105
MS.gene058059.t1 AT3G47680 34.375 224 117 8 118 326 44 252 1.62e-22 96.7
MS.gene058059.t1 AT1G66235 27.778 126 88 2 124 246 7 132 1.69e-12 67.8

Find 74 sgRNAs with CRISPR-Local

Find 100 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGCTTCTCCCTTCCATTT+AGG 0.213354 5.1:+1510563 None:intergenic
AATTCCCACGATCGGATCTT+TGG 0.275581 5.1:+1510862 None:intergenic
GAACCGTCACCGGCAGTTAA+TGG 0.321759 5.1:+1511103 None:intergenic
TGTTGAAGGATGAACCTAAA+TGG 0.353625 5.1:-1510577 MS.gene058059:CDS
GAAGTATTTCAAGAGAAGTT+AGG 0.386733 5.1:-1510180 None:intergenic
TTTGAGAACCATCACCGATT+GGG 0.409235 5.1:+1511236 None:intergenic
TGTTGAATAGACATTGTCAT+TGG 0.417954 5.1:-1510733 MS.gene058059:CDS
GTTGTATTCTGAACAATCAA+TGG 0.420235 5.1:+1510469 None:intergenic
TCAACCACCTAGCGTAGAAC+TGG 0.422168 5.1:-1511056 MS.gene058059:CDS
TCCACAATGGGTGTTGTAGA+TGG 0.423191 5.1:+1510377 None:intergenic
ATGATAATTTCATACAACTT+TGG 0.432224 5.1:+1510272 None:intergenic
AATTATAGTAATGGTTCCAT+TGG 0.452755 5.1:+1511269 None:intergenic
TTGTATTCTGAACAATCAAT+GGG 0.457951 5.1:+1510470 None:intergenic
AGATCAAAGACATCATCTAC+TGG 0.478245 5.1:-1510524 MS.gene058059:CDS
TTTGCATATAATTATAGTAA+TGG 0.482649 5.1:+1511260 None:intergenic
CATGATGGACAAATCAAAGA+TGG 0.486498 5.1:-1510252 MS.gene058059:CDS
AATGTTACTTCCACGGAAGA+AGG 0.498412 5.1:-1510968 MS.gene058059:CDS
GCACGCGTGGCGGTTGTTGA+AGG 0.504466 5.1:-1510591 MS.gene058059:CDS
AGAAGTTTGTAAAAGTATCA+AGG 0.506530 5.1:-1510204 MS.gene058059:CDS
CTGCTAGGGAGTGGTGGTCG+TGG 0.507126 5.1:+1511193 None:intergenic
GTTGTATGAAATTATCATGA+TGG 0.509191 5.1:-1510267 MS.gene058059:CDS
TATTGAGAACCGTCACTGCT+AGG 0.510279 5.1:+1511178 None:intergenic
AATTATATGCAAACCCCAAT+CGG 0.514611 5.1:-1511250 MS.gene058059:CDS
TAAAATAGCTGAAGCAAGGT+TGG 0.515676 5.1:-1510306 MS.gene058059:CDS
GCTGTTACTAACAAGAAAAG+TGG 0.520506 5.1:-1510689 MS.gene058059:CDS
GTCTAGCATCGAAAATGTCT+CGG 0.531029 5.1:-1510351 MS.gene058059:CDS
ATGCTAGACAAATCCACAAT+GGG 0.540830 5.1:+1510365 None:intergenic
GCAGTCTGAGTCCGACATCA+TGG 0.543761 5.1:-1510666 MS.gene058059:CDS
CAATCACCGCCATTAACTGC+CGG 0.543770 5.1:-1511112 MS.gene058059:CDS
GGAGACTCATAGCGAGGGAG+TGG 0.545823 5.1:-1510781 MS.gene058059:CDS
GATTGAAACATACAAGGTCG+TGG 0.546490 5.1:+1511130 None:intergenic
TTGAGAACCATCACCGATTG+GGG 0.549171 5.1:+1511237 None:intergenic
AGTGCCAGTGTACTCGACTC+AGG 0.551047 5.1:-1511002 MS.gene058059:CDS
GGTGATTCCAGTTCTACGCT+AGG 0.553730 5.1:+1511049 None:intergenic
ATCTCAAACTGACCGTCCGA+TGG 0.554128 5.1:-1510441 MS.gene058059:CDS
GTCAAATGGATCACAACCAA+TGG 0.559003 5.1:-1511285 None:intergenic
TCTCAAACTGACCGTCCGAT+GGG 0.559121 5.1:-1510440 MS.gene058059:CDS
ATTGAGAACCGTCACTGCTA+GGG 0.559663 5.1:+1511179 None:intergenic
GAATCTGTAGTGGATTCAAT+TGG 0.562646 5.1:+1511028 None:intergenic
GAAGGATGAACCTAAATGGA+AGG 0.565794 5.1:-1510573 MS.gene058059:CDS
TCCATCTACAACACCCATTG+TGG 0.571693 5.1:-1510378 MS.gene058059:CDS
ATGCAAACCCCAATCGGTGA+TGG 0.572846 5.1:-1511244 MS.gene058059:CDS
CTGTTACTAACAAGAAAAGT+GGG 0.573605 5.1:-1510688 MS.gene058059:CDS
TCTAGAAAATGTTACTTCCA+CGG 0.579593 5.1:-1510975 MS.gene058059:CDS
CCACCACTCCCTAGCAGTGA+CGG 0.586402 5.1:-1511187 MS.gene058059:CDS
CCGCCATTAACTGCCGGTGA+CGG 0.594377 5.1:-1511106 MS.gene058059:CDS
ATAAATTGCTTATTCAAACA+TGG 0.603441 5.1:-1510895 MS.gene058059:CDS
GAACCGTCACTGCTAGGGAG+TGG 0.603444 5.1:+1511184 None:intergenic
ATTGAAACATACAAGGTCGT+GGG 0.606011 5.1:+1511131 None:intergenic
AGAACGCTCTCCTTCTTCCG+TGG 0.611495 5.1:+1510958 None:intergenic
CCAGTGTACTCGACTCAGGT+TGG 0.613284 5.1:-1510998 MS.gene058059:CDS
CCGTCACTGCTAGGGAGTGG+TGG 0.615284 5.1:+1511187 None:intergenic
ATGTGCATCATCCATGATGT+CGG 0.617093 5.1:+1510655 None:intergenic
ATAATAAAATAGCTGAAGCA+AGG 0.619943 5.1:-1510310 MS.gene058059:CDS
AAGGATGAACCTAAATGGAA+GGG 0.623792 5.1:-1510572 MS.gene058059:CDS
GGCGGTGATTGAAACATACA+AGG 0.629344 5.1:+1511124 None:intergenic
GATTCCAGTTCTACGCTAGG+TGG 0.631252 5.1:+1511052 None:intergenic
ATTTCCAAAGATCCGATCGT+GGG 0.634120 5.1:-1510866 MS.gene058059:CDS
GATCAAAGACATCATCTACT+GGG 0.635030 5.1:-1510523 MS.gene058059:CDS
GTTTCACAATGGAGCACGCG+TGG 0.636597 5.1:-1510604 MS.gene058059:CDS
CATTTCCAAAGATCCGATCG+TGG 0.640936 5.1:-1510867 MS.gene058059:CDS
GATGGCTATGACAAATATCG+TGG 0.640937 5.1:-1510803 MS.gene058059:CDS
TCGTGGGAGACTCATAGCGA+GGG 0.641783 5.1:-1510786 MS.gene058059:CDS
CCAACCTGAGTCGAGTACAC+TGG 0.644022 5.1:+1510998 None:intergenic
CTCAAACTGACCGTCCGATG+GGG 0.645892 5.1:-1510439 MS.gene058059:CDS
ATCGTGGGAGACTCATAGCG+AGG 0.654193 5.1:-1510787 MS.gene058059:CDS
ATGGCTATGACAAATATCGT+GGG 0.656586 5.1:-1510802 MS.gene058059:CDS
GATGCTAGACAAATCCACAA+TGG 0.658808 5.1:+1510364 None:intergenic
ACGTAAAATACGTTTCACAA+TGG 0.660458 5.1:-1510615 MS.gene058059:CDS
TGGCACTTGAGAATCTGTAG+TGG 0.662634 5.1:+1511018 None:intergenic
GGTCCACACTCAAATCTCGA+TGG 0.664593 5.1:-1510760 MS.gene058059:CDS
TCACAATGGAGCACGCGTGG+CGG 0.673207 5.1:-1510601 MS.gene058059:CDS
CCGTCACCGGCAGTTAATGG+CGG 0.711408 5.1:+1511106 None:intergenic
ATGCCATCGAGATTTGAGTG+TGG 0.717662 5.1:+1510757 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTGCATATAATTATAGTAA+TGG + chr5.1:1510204-1510223 None:intergenic 15.0%
!! ATAAATTGCTTATTCAAACA+TGG - chr5.1:1510566-1510585 MS.gene058059:CDS 20.0%
!! ATGATAATTTCATACAACTT+TGG + chr5.1:1511192-1511211 None:intergenic 20.0%
! AATTATAGTAATGGTTCCAT+TGG + chr5.1:1510195-1510214 None:intergenic 25.0%
! ATAATAAAATAGCTGAAGCA+AGG - chr5.1:1511151-1511170 MS.gene058059:CDS 25.0%
! GTTGTATGAAATTATCATGA+TGG - chr5.1:1511194-1511213 MS.gene058059:CDS 25.0%
! TTGTATTCTGAACAATCAAT+GGG + chr5.1:1510994-1511013 None:intergenic 25.0%
!!! AGAAGTTTGTAAAAGTATCA+AGG - chr5.1:1511257-1511276 MS.gene058059:CDS 25.0%
AATTATATGCAAACCCCAAT+CGG - chr5.1:1510211-1510230 MS.gene058059:CDS 30.0%
ACGTAAAATACGTTTCACAA+TGG - chr5.1:1510846-1510865 MS.gene058059:CDS 30.0%
CTAGGTGGTTGAAAAATAAA+AGG + chr5.1:1510397-1510416 None:intergenic 30.0%
CTGTTACTAACAAGAAAAGT+GGG - chr5.1:1510773-1510792 MS.gene058059:CDS 30.0%
GTTGTATTCTGAACAATCAA+TGG + chr5.1:1510995-1511014 None:intergenic 30.0%
TGTTGAATAGACATTGTCAT+TGG - chr5.1:1510728-1510747 MS.gene058059:CDS 30.0%
! TCTAGAAAATGTTACTTCCA+CGG - chr5.1:1510486-1510505 MS.gene058059:CDS 30.0%
!!! GTTTTGAGACATAAAAGGTT+GGG + chr5.1:1510311-1510330 None:intergenic 30.0%
!!! TTTTGAGACATAAAAGGTTG+GGG + chr5.1:1510310-1510329 None:intergenic 30.0%
AAGGATGAACCTAAATGGAA+GGG - chr5.1:1510889-1510908 MS.gene058059:CDS 35.0%
AGATCAAAGACATCATCTAC+TGG - chr5.1:1510937-1510956 MS.gene058059:CDS 35.0%
ATGCTAGACAAATCCACAAT+GGG + chr5.1:1511099-1511118 None:intergenic 35.0%
ATGGCTATGACAAATATCGT+GGG - chr5.1:1510659-1510678 MS.gene058059:CDS 35.0%
ATTGAAACATACAAGGTCGT+GGG + chr5.1:1510333-1510352 None:intergenic 35.0%
GATCAAAGACATCATCTACT+GGG - chr5.1:1510938-1510957 MS.gene058059:CDS 35.0%
GCTGTTACTAACAAGAAAAG+TGG - chr5.1:1510772-1510791 MS.gene058059:CDS 35.0%
GGTTGAAAAATAAAAGGTCG+TGG + chr5.1:1510391-1510410 None:intergenic 35.0%
TAAAATAGCTGAAGCAAGGT+TGG - chr5.1:1511155-1511174 MS.gene058059:CDS 35.0%
TGTTGAAGGATGAACCTAAA+TGG - chr5.1:1510884-1510903 MS.gene058059:CDS 35.0%
! ACCAAAAAGCAGATAGCTTT+TGG - chr5.1:1510623-1510642 MS.gene058059:CDS 35.0%
! CAAAAAGCAGATAGCTTTTG+GGG - chr5.1:1510625-1510644 MS.gene058059:CDS 35.0%
! CCAAAAAGCAGATAGCTTTT+GGG - chr5.1:1510624-1510643 MS.gene058059:CDS 35.0%
! GAACAATCAATGGGATTTTC+TGG + chr5.1:1510985-1511004 None:intergenic 35.0%
!! CATGATGGACAAATCAAAGA+TGG - chr5.1:1511209-1511228 MS.gene058059:CDS 35.0%
!! GAATCTGTAGTGGATTCAAT+TGG + chr5.1:1510436-1510455 None:intergenic 35.0%
!!! ACCTGAAACGTTGTTTTTTC+TGG + chr5.1:1510531-1510550 None:intergenic 35.0%
!!! AGACATTGTCATTGGTTTTG+CGG - chr5.1:1510736-1510755 MS.gene058059:CDS 35.0%
!!! GGTTTTGAGACATAAAAGGT+TGG + chr5.1:1510312-1510331 None:intergenic 35.0%
AAAAAGGAAGGGAAAGGGAA+AGG - chr5.1:1511056-1511075 MS.gene058059:CDS 40.0%
ATGTGCATCATCCATGATGT+CGG + chr5.1:1510809-1510828 None:intergenic 40.0%
ATTGCTTCTCCCTTCCATTT+AGG + chr5.1:1510901-1510920 None:intergenic 40.0%
ATTTCCAAAGATCCGATCGT+GGG - chr5.1:1510595-1510614 MS.gene058059:CDS 40.0%
CAAAAAGCGGCAAAAAGGAA+GGG - chr5.1:1511045-1511064 MS.gene058059:CDS 40.0%
GAAGGATGAACCTAAATGGA+AGG - chr5.1:1510888-1510907 MS.gene058059:CDS 40.0%
GATGCTAGACAAATCCACAA+TGG + chr5.1:1511100-1511119 None:intergenic 40.0%
GATGGCTATGACAAATATCG+TGG - chr5.1:1510658-1510677 MS.gene058059:CDS 40.0%
GATTGAAACATACAAGGTCG+TGG + chr5.1:1510334-1510353 None:intergenic 40.0%
GCCAGAAAAAACAACGTTTC+AGG - chr5.1:1510527-1510546 MS.gene058059:CDS 40.0%
! AATGTTACTTCCACGGAAGA+AGG - chr5.1:1510493-1510512 MS.gene058059:CDS 40.0%
! GTCTAGCATCGAAAATGTCT+CGG - chr5.1:1511110-1511129 MS.gene058059:CDS 40.0%
! TTTGAGAACCATCACCGATT+GGG + chr5.1:1510228-1510247 None:intergenic 40.0%
! TTTTGGTCAATTCCCACGAT+CGG + chr5.1:1510610-1510629 None:intergenic 40.0%
!! CCCAAAAGCTATCTGCTTTT+TGG + chr5.1:1510627-1510646 None:intergenic 40.0%
!! TTTTGAGAACCATCACCGAT+TGG + chr5.1:1510229-1510248 None:intergenic 40.0%
!!! CGTGGGTTTTGAGACATAAA+AGG + chr5.1:1510316-1510335 None:intergenic 40.0%
!!! TAGCTTTTGGGGTAGAATCA+AGG - chr5.1:1510636-1510655 MS.gene058059:CDS 40.0%
!!! TTTTGGGGTAGAATCAAGGA+TGG - chr5.1:1510640-1510659 MS.gene058059:CDS 40.0%
AATTCCCACGATCGGATCTT+TGG + chr5.1:1510602-1510621 None:intergenic 45.0%
ATGCCATCGAGATTTGAGTG+TGG + chr5.1:1510707-1510726 None:intergenic 45.0%
ATTGAGAACCGTCACTGCTA+GGG + chr5.1:1510285-1510304 None:intergenic 45.0%
CATTTCCAAAGATCCGATCG+TGG - chr5.1:1510594-1510613 MS.gene058059:CDS 45.0%
GCAAAAAGCGGCAAAAAGGA+AGG - chr5.1:1511044-1511063 MS.gene058059:CDS 45.0%
GGCGGTGATTGAAACATACA+AGG + chr5.1:1510340-1510359 None:intergenic 45.0%
TATTGAGAACCGTCACTGCT+AGG + chr5.1:1510286-1510305 None:intergenic 45.0%
TCCATCTACAACACCCATTG+TGG - chr5.1:1511083-1511102 MS.gene058059:CDS 45.0%
TGGCACTTGAGAATCTGTAG+TGG + chr5.1:1510446-1510465 None:intergenic 45.0%
! TCCACAATGGGTGTTGTAGA+TGG + chr5.1:1511087-1511106 None:intergenic 45.0%
! TTGAGAACCATCACCGATTG+GGG + chr5.1:1510227-1510246 None:intergenic 45.0%
!! TGGATTTTGAGAACCGTCAC+CGG + chr5.1:1510371-1510390 None:intergenic 45.0%
AGCGGCAAAAAGGAAGGGAA+AGG - chr5.1:1511050-1511069 MS.gene058059:CDS 50.0%
ATCTCAAACTGACCGTCCGA+TGG - chr5.1:1511020-1511039 MS.gene058059:CDS 50.0%
ATGCAAACCCCAATCGGTGA+TGG - chr5.1:1510217-1510236 MS.gene058059:CDS 50.0%
CAATCACCGCCATTAACTGC+CGG - chr5.1:1510349-1510368 MS.gene058059:CDS 50.0%
GATTCCAGTTCTACGCTAGG+TGG + chr5.1:1510412-1510431 None:intergenic 50.0%
GCGGCAAAAAGGAAGGGAAA+GGG - chr5.1:1511051-1511070 MS.gene058059:CDS 50.0%
GGTCCACACTCAAATCTCGA+TGG - chr5.1:1510701-1510720 MS.gene058059:CDS 50.0%
GGTGATTCCAGTTCTACGCT+AGG + chr5.1:1510415-1510434 None:intergenic 50.0%
TCAACCACCTAGCGTAGAAC+TGG - chr5.1:1510405-1510424 MS.gene058059:CDS 50.0%
TCTCAAACTGACCGTCCGAT+GGG - chr5.1:1511021-1511040 MS.gene058059:CDS 50.0%
TGGGGCAAAAAGCGGCAAAA+AGG - chr5.1:1511040-1511059 MS.gene058059:CDS 50.0%
!!! TTTGCCGCTTTTTGCCCCAT+CGG + chr5.1:1511039-1511058 None:intergenic 50.0%
AGAACGCTCTCCTTCTTCCG+TGG + chr5.1:1510506-1510525 None:intergenic 55.0%
AGTGCCAGTGTACTCGACTC+AGG - chr5.1:1510459-1510478 MS.gene058059:CDS 55.0%
ATCGTGGGAGACTCATAGCG+AGG - chr5.1:1510674-1510693 MS.gene058059:CDS 55.0%
CCAACCTGAGTCGAGTACAC+TGG + chr5.1:1510466-1510485 None:intergenic 55.0%
CCAGTGTACTCGACTCAGGT+TGG - chr5.1:1510463-1510482 MS.gene058059:CDS 55.0%
CTCAAACTGACCGTCCGATG+GGG - chr5.1:1511022-1511041 MS.gene058059:CDS 55.0%
GAACCGTCACCGGCAGTTAA+TGG + chr5.1:1510361-1510380 None:intergenic 55.0%
GCAGTCTGAGTCCGACATCA+TGG - chr5.1:1510795-1510814 MS.gene058059:CDS 55.0%
GTTTCACAATGGAGCACGCG+TGG - chr5.1:1510857-1510876 MS.gene058059:CDS 55.0%
TCGTGGGAGACTCATAGCGA+GGG - chr5.1:1510675-1510694 MS.gene058059:CDS 55.0%
CCACCACTCCCTAGCAGTGA+CGG - chr5.1:1510274-1510293 MS.gene058059:CDS 60.0%
CCGCCATTAACTGCCGGTGA+CGG - chr5.1:1510355-1510374 MS.gene058059:CDS 60.0%
CCGTCACCGGCAGTTAATGG+CGG + chr5.1:1510358-1510377 None:intergenic 60.0%
CCGTCCGATGGGGCAAAAAG+CGG - chr5.1:1511032-1511051 MS.gene058059:CDS 60.0%
GAACCGTCACTGCTAGGGAG+TGG + chr5.1:1510280-1510299 None:intergenic 60.0%
GGAGACTCATAGCGAGGGAG+TGG - chr5.1:1510680-1510699 MS.gene058059:CDS 60.0%
TCACAATGGAGCACGCGTGG+CGG - chr5.1:1510860-1510879 MS.gene058059:CDS 60.0%
!!! CCGCTTTTTGCCCCATCGGA+CGG + chr5.1:1511035-1511054 None:intergenic 60.0%
CCGTCACTGCTAGGGAGTGG+TGG + chr5.1:1510277-1510296 None:intergenic 65.0%
CTGCTAGGGAGTGGTGGTCG+TGG + chr5.1:1510271-1510290 None:intergenic 65.0%
GCACGCGTGGCGGTTGTTGA+AGG - chr5.1:1510870-1510889 MS.gene058059:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 1510181 1511302 1510181 ID=MS.gene058059
chr5.1 mRNA 1510181 1511302 1510181 ID=MS.gene058059.t1;Parent=MS.gene058059
chr5.1 exon 1510181 1511302 1510181 ID=MS.gene058059.t1.exon1;Parent=MS.gene058059.t1
chr5.1 CDS 1510181 1511302 1510181 ID=cds.MS.gene058059.t1;Parent=MS.gene058059.t1
Gene Sequence

>MS.gene058059

ATGGATCACAACCAATGGAACCATTACTATAATTATATGCAAACCCCAATCGGTGATGGTTCTCAAAATTTTCAATCTTTTACGTATCCACGACCACCACTCCCTAGCAGTGACGGTTCTCAATATCCCCAACCTTTTATGTCTCAAAACCCACGACCTTGTATGTTTCAATCACCGCCATTAACTGCCGGTGACGGTTCTCAAAATCCACGACCTTTTATTTTTCAACCACCTAGCGTAGAACTGGAATCACCAATTGAATCCACTACAGATTCTCAAGTGCCAGTGTACTCGACTCAGGTTGGTCTAGAAAATGTTACTTCCACGGAAGAAGGAGAGCGTTCTAGCCAGAAAAAACAACGTTTCAGGTTCTCAGATGAAGAAGATAAATTGCTTATTCAAACATGGCTCAACATTTCCAAAGATCCGATCGTGGGAATTGACCAAAAAGCAGATAGCTTTTGGGGTAGAATCAAGGATGGCTATGACAAATATCGTGGGAGACTCATAGCGAGGGAGTGGTCCACACTCAAATCTCGATGGCATTTGTTGAATAGACATTGTCATTGGTTTTGCGGCTCTTACAAACTAGCTGTTACTAACAAGAAAAGTGGGCAGTCTGAGTCCGACATCATGGATGATGCACATATGCTTTTTGTACAAGTACGTAAAATACGTTTCACAATGGAGCACGCGTGGCGGTTGTTGAAGGATGAACCTAAATGGAAGGGAGAAGCAATGAACAACTCTTCAAAGAGATCAAAGACATCATCTACTGGGACATACTCATCTACATCTAATCCAGAAAATCCCATTGATTGTTCAGAATACAACAATGCATCTCAAACTGACCGTCCGATGGGGCAAAAAGCGGCAAAAAGGAAGGGAAAGGGAAAGGCATCTCCATCTACAACACCCATTGTGGATTTGTCTAGCATCGAAAATGTCTCGGAAAAGAAACTAGATGTGTATAATAAAATAGCTGAAGCAAGGTTGGCAGAGAGCATACCAAAGTTGTATGAAATTATCATGATGGACAAATCAAAGATGGATGATGAGCAACGTCATGAGCATGAAGAAGTTTGTAAAAGTATCAAGGAGAAGTATTTCAAGAGAAGTTAG
Protein sequence

>MS.gene058059.t1

MDHNQWNHYYNYMQTPIGDGSQNFQSFTYPRPPLPSSDGSQYPQPFMSQNPRPCMFQSPPLTAGDGSQNPRPFIFQPPSVELESPIESTTDSQVPVYSTQVGLENVTSTEEGERSSQKKQRFRFSDEEDKLLIQTWLNISKDPIVGIDQKADSFWGRIKDGYDKYRGRLIAREWSTLKSRWHLLNRHCHWFCGSYKLAVTNKKSGQSESDIMDDAHMLFVQVRKIRFTMEHAWRLLKDEPKWKGEAMNNSSKRSKTSSTGTYSSTSNPENPIDCSEYNNASQTDRPMGQKAAKRKGKGKASPSTTPIVDLSSIENVSEKKLDVYNKIAEARLAESIPKLYEIIMMDKSKMDDEQRHEHEEVCKSIKEKYFKRS