Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058757.t1 | XP_003598020.1 | 99.3 | 402 | 3 | 0 | 241 | 642 | 182 | 583 | 3.40E-231 | 811.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058757.t1 | P27707 | 41.0 | 195 | 92 | 5 | 332 | 507 | 26 | 216 | 1.8e-31 | 139.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058757.t1 | G7IYD9 | 99.3 | 402 | 3 | 0 | 241 | 642 | 182 | 583 | 2.4e-231 | 811.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene058757 | MS.gene35469 | 0.801961 | 7.03E-49 | -1.69E-46 |
MS.gene058757 | MS.gene39353 | 0.805027 | 1.63E-49 | -1.69E-46 |
MS.gene058757 | MS.gene50840 | 0.943342 | 1.43E-102 | -1.69E-46 |
MS.gene058757 | MS.gene54286 | 0.804288 | 2.32E-49 | -1.69E-46 |
MS.gene058757 | MS.gene58998 | 0.807453 | 5.02E-50 | -1.69E-46 |
MS.gene058757 | MS.gene69119 | 0.822406 | 2.41E-53 | -1.69E-46 |
MS.gene058757 | MS.gene86259 | 0.807681 | 4.49E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058757.t1 | MTR_3g005360 | 97.857 | 420 | 6 | 1 | 223 | 642 | 167 | 583 | 0.0 | 860 |
MS.gene058757.t1 | MTR_8g470880 | 82.313 | 147 | 26 | 0 | 12 | 158 | 378 | 524 | 1.01e-81 | 268 |
MS.gene058757.t1 | MTR_1g100687 | 54.124 | 194 | 87 | 1 | 12 | 203 | 19 | 212 | 3.61e-71 | 230 |
MS.gene058757.t1 | MTR_0042s0130 | 52.041 | 196 | 92 | 1 | 4 | 197 | 112 | 307 | 9.28e-64 | 214 |
MS.gene058757.t1 | MTR_4g020630 | 47.210 | 233 | 101 | 2 | 12 | 244 | 27 | 237 | 1.95e-63 | 218 |
MS.gene058757.t1 | MTR_6g009010 | 54.651 | 172 | 62 | 1 | 12 | 183 | 106 | 261 | 2.15e-60 | 202 |
MS.gene058757.t1 | MTR_0114s0080 | 83.486 | 109 | 18 | 0 | 27 | 135 | 21 | 129 | 1.19e-59 | 196 |
MS.gene058757.t1 | MTR_6g034215 | 48.980 | 196 | 82 | 1 | 8 | 203 | 101 | 278 | 1.76e-57 | 197 |
MS.gene058757.t1 | MTR_6g034715 | 59.398 | 133 | 54 | 0 | 12 | 144 | 11 | 143 | 1.86e-54 | 184 |
MS.gene058757.t1 | MTR_2g018005 | 64.286 | 126 | 45 | 0 | 12 | 137 | 105 | 230 | 3.16e-54 | 185 |
MS.gene058757.t1 | MTR_1g051330 | 46.196 | 184 | 98 | 1 | 12 | 195 | 238 | 420 | 2.48e-52 | 192 |
MS.gene058757.t1 | MTR_2g055450 | 49.457 | 184 | 78 | 1 | 12 | 195 | 139 | 307 | 3.19e-51 | 182 |
MS.gene058757.t1 | MTR_3g044860 | 50.307 | 163 | 55 | 1 | 40 | 202 | 3 | 139 | 9.88e-49 | 172 |
MS.gene058757.t1 | MTR_8g463110 | 51.282 | 156 | 76 | 0 | 48 | 203 | 119 | 274 | 3.68e-48 | 179 |
MS.gene058757.t1 | MTR_2g078880 | 55.385 | 130 | 43 | 1 | 12 | 141 | 82 | 196 | 2.26e-43 | 155 |
MS.gene058757.t1 | MTR_6g046587 | 50.336 | 149 | 73 | 1 | 12 | 160 | 133 | 280 | 5.52e-43 | 156 |
MS.gene058757.t1 | MTR_4g044433 | 86.111 | 72 | 10 | 0 | 12 | 83 | 76 | 147 | 7.69e-41 | 146 |
MS.gene058757.t1 | MTR_0093s0080 | 48.837 | 129 | 44 | 2 | 8 | 136 | 18 | 124 | 1.56e-35 | 131 |
MS.gene058757.t1 | MTR_2g064335 | 36.413 | 184 | 92 | 3 | 12 | 195 | 18 | 176 | 2.06e-28 | 116 |
MS.gene058757.t1 | MTR_8g446890 | 41.333 | 150 | 59 | 4 | 27 | 176 | 7 | 127 | 1.53e-26 | 106 |
MS.gene058757.t1 | MTR_4g033730 | 51.111 | 90 | 44 | 0 | 13 | 102 | 49 | 138 | 3.53e-25 | 102 |
MS.gene058757.t1 | MTR_8g019640 | 36.747 | 166 | 65 | 3 | 27 | 191 | 3 | 129 | 3.80e-25 | 108 |
MS.gene058757.t1 | MTR_1g062290 | 66.154 | 65 | 22 | 0 | 115 | 179 | 1 | 65 | 3.85e-22 | 94.4 |
MS.gene058757.t1 | MTR_8g442690 | 29.744 | 195 | 127 | 3 | 13 | 201 | 53 | 243 | 2.50e-20 | 95.1 |
MS.gene058757.t1 | MTR_0112s0060 | 56.164 | 73 | 32 | 0 | 64 | 136 | 36 | 108 | 2.91e-20 | 87.4 |
MS.gene058757.t1 | MTR_2g084625 | 47.436 | 78 | 41 | 0 | 17 | 94 | 24 | 101 | 2.39e-18 | 87.0 |
MS.gene058757.t1 | MTR_0123s0050 | 64.000 | 50 | 18 | 0 | 82 | 131 | 1 | 50 | 4.87e-18 | 79.3 |
MS.gene058757.t1 | MTR_1g054775 | 31.088 | 193 | 128 | 4 | 13 | 203 | 658 | 847 | 1.67e-14 | 77.8 |
MS.gene058757.t1 | MTR_7g057470 | 26.214 | 206 | 127 | 6 | 10 | 205 | 316 | 506 | 5.99e-13 | 72.4 |
MS.gene058757.t1 | MTR_7g057490 | 26.214 | 206 | 127 | 6 | 10 | 205 | 316 | 506 | 5.99e-13 | 72.4 |
MS.gene058757.t1 | MTR_7g080340 | 46.429 | 56 | 30 | 0 | 14 | 69 | 4 | 59 | 1.78e-12 | 63.2 |
MS.gene058757.t1 | MTR_0032s0100 | 32.593 | 135 | 84 | 3 | 37 | 170 | 30 | 158 | 1.80e-12 | 67.0 |
MS.gene058757.t1 | MTR_0111s0070 | 26.180 | 233 | 161 | 4 | 10 | 237 | 225 | 451 | 4.42e-12 | 69.7 |
MS.gene058757.t1 | MTR_4g122570 | 36.792 | 106 | 66 | 1 | 66 | 171 | 328 | 432 | 6.27e-12 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058757.t1 | AT1G72040 | 73.934 | 422 | 101 | 5 | 220 | 636 | 159 | 576 | 0.0 | 639 |
Find 169 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTCTTCTTCTAGCAGTTTC+TGG | 0.158466 | 3.1:-626161 | None:intergenic |
ATCCTTGCTGAAATCAATAT+TGG | 0.197353 | 3.1:-632454 | None:intergenic |
CCTGATTTGTTGGCTATTCC+TGG | 0.217222 | 3.1:+630716 | MS.gene058757:CDS |
GAGCTTTAGTATCCAATTCT+TGG | 0.227006 | 3.1:+626429 | MS.gene058757:CDS |
TGGATGTTCACAGGTTTCTA+TGG | 0.241122 | 3.1:+626134 | MS.gene058757:intron |
CTTCATCTTTCAGACTTAAT+AGG | 0.282383 | 3.1:+630651 | MS.gene058757:intron |
ATATAAAACCATCGGGAATA+AGG | 0.284820 | 3.1:-632060 | None:intergenic |
TCCTTAACTTCATTCTTTGA+TGG | 0.286569 | 3.1:-632108 | None:intergenic |
ATTCTTTGATGGCAAGTATC+AGG | 0.291458 | 3.1:-632097 | None:intergenic |
AATACACGGTCTCTTATATC+AGG | 0.292967 | 3.1:-632277 | None:intergenic |
GCAGCACCTGTGGTTGGTTC+TGG | 0.301226 | 3.1:-634043 | None:intergenic |
ATCTAGTCCTCCTGATTTGT+TGG | 0.334574 | 3.1:+630706 | MS.gene058757:CDS |
TGCCACTTGCCAATTGGTTC+AGG | 0.335895 | 3.1:-631534 | None:intergenic |
AAATAAATGCATCCAAGAAT+TGG | 0.338939 | 3.1:-626441 | None:intergenic |
AACTCATTGCAACAAGCTTC+AGG | 0.340519 | 3.1:+626700 | MS.gene058757:CDS |
CTCCATCTCATTCATCCAAT+TGG | 0.351738 | 3.1:-631987 | None:intergenic |
CTATTCCTGGTGTGGGTCCC+AGG | 0.363835 | 3.1:+630729 | MS.gene058757:CDS |
TTCTGAAGTCCAAGGGTGGC+CGG | 0.369193 | 3.1:-634112 | None:intergenic |
ACGCAGTTCAATAGTTTCAT+TGG | 0.370500 | 3.1:-631493 | None:intergenic |
CATCAAGCCTCTTCGATTGA+TGG | 0.372708 | 3.1:+631683 | MS.gene058757:CDS |
AAGTTTACCTTGGTGTTTGA+TGG | 0.379005 | 3.1:+626220 | MS.gene058757:CDS |
CCTGTTGTGTCTACCTTGCC+TGG | 0.402035 | 3.1:+632037 | MS.gene058757:CDS |
GCCATCAAAGAATGAAGTTA+AGG | 0.403313 | 3.1:+632107 | MS.gene058757:CDS |
TCCTTGCTGAAATCAATATT+GGG | 0.404770 | 3.1:-632453 | None:intergenic |
TCTGAAGTCCAAGGGTGGCC+GGG | 0.405588 | 3.1:-634111 | None:intergenic |
GCATGGAATTGCCGAGGCTT+GGG | 0.410619 | 3.1:+625849 | None:intergenic |
AGCATGGAATTGCCGAGGCT+TGG | 0.423497 | 3.1:+625848 | None:intergenic |
CTTTCAAATTTGAGAACGCT+TGG | 0.424469 | 3.1:+626564 | MS.gene058757:CDS |
TACTTTCAGCATGGTTCTTG+TGG | 0.426754 | 3.1:-631329 | None:intergenic |
CTGAAGTCCAAGGGTGGCCG+GGG | 0.427190 | 3.1:-634110 | None:intergenic |
TGGTAATCATGGAGTATTAT+CGG | 0.432768 | 3.1:+632216 | MS.gene058757:CDS |
ATTTGATACCTTCTGAATGC+TGG | 0.433730 | 3.1:-632326 | None:intergenic |
ACATCCTGCCACTTGCCAAT+TGG | 0.441088 | 3.1:-631540 | None:intergenic |
CGTCAAGCCATTCAAGATGC+TGG | 0.444182 | 3.1:+626320 | MS.gene058757:CDS |
CCCTCCCACAGTGGTAATCA+TGG | 0.446677 | 3.1:+632205 | MS.gene058757:CDS |
ATAGTTATCTTACTCCCTCT+TGG | 0.449688 | 3.1:-632484 | None:intergenic |
GAAGTGGATGATAATTCCTC+TGG | 0.451397 | 3.1:+631384 | MS.gene058757:CDS |
CTCGTTCAGAAAGGTATTCA+AGG | 0.453440 | 3.1:+630764 | MS.gene058757:CDS |
GATAGCTGGCTGGGTAGTGC+AGG | 0.459195 | 3.1:+626620 | MS.gene058757:CDS |
CCAGGAATAGCCAACAAATC+AGG | 0.460862 | 3.1:-630716 | None:intergenic |
TTGTGTTGGGTGCAGTTCAT+TGG | 0.461411 | 3.1:+631255 | MS.gene058757:intron |
GGAGGGCTACAAGACCTAAC+TGG | 0.469948 | 3.1:+626282 | MS.gene058757:CDS |
CGACTTACGTTCTGTGTTGA+GGG | 0.471827 | 3.1:+631429 | MS.gene058757:CDS |
AGTTTACCTTGGTGTTTGAT+GGG | 0.473140 | 3.1:+626221 | MS.gene058757:CDS |
AACTGGAAAGGAAAGGAGAA+AGG | 0.474602 | 3.1:-629994 | None:intergenic |
GAGCTGTTCATGAAGCCAAT+TGG | 0.476172 | 3.1:+631972 | MS.gene058757:CDS |
CCAGGCAAGGTAGACACAAC+AGG | 0.485266 | 3.1:-632037 | None:intergenic |
CTTATTGATGTTCATATGGA+AGG | 0.486879 | 3.1:+626344 | MS.gene058757:CDS |
AGATAAGCATCTATGACTCT+TGG | 0.489241 | 3.1:+632008 | MS.gene058757:CDS |
ATTTGTTACCAGGGTGATGC+AGG | 0.492135 | 3.1:+631641 | MS.gene058757:CDS |
TTGTTGGCTATTCCTGGTGT+GGG | 0.492293 | 3.1:+630722 | MS.gene058757:CDS |
CGCGCAGGTTTCCCAAGCCT+CGG | 0.493655 | 3.1:-625860 | None:intergenic |
CATGATTACCACTGTGGGAG+GGG | 0.496667 | 3.1:-632204 | None:intergenic |
ACTGGAAAGGAAAGGAGAAA+GGG | 0.498574 | 3.1:-629993 | None:intergenic |
AAAACTACGTATTTGTTACC+AGG | 0.500178 | 3.1:+631631 | MS.gene058757:CDS |
GAAGGTAACCTGTGGCTACC+AGG | 0.503200 | 3.1:+634074 | MS.gene058757:CDS |
TTGCCTGGCCTTATTCCCGA+TGG | 0.503417 | 3.1:+632052 | MS.gene058757:CDS |
CTGAGATATATAAAACCATC+GGG | 0.503584 | 3.1:-632067 | None:intergenic |
AATAAGCCCAGCATCTTGAA+TGG | 0.503815 | 3.1:-626327 | None:intergenic |
AACCCTCTGATAAGCCAGTT+AGG | 0.506359 | 3.1:-626296 | None:intergenic |
AGGGCAATGTCATATATGTC+TGG | 0.506658 | 3.1:+634134 | MS.gene058757:CDS |
GTCAAGCCATTCAAGATGCT+GGG | 0.506708 | 3.1:+626321 | MS.gene058757:CDS |
TGGGCTTATTGATGTTCATA+TGG | 0.507181 | 3.1:+626340 | MS.gene058757:CDS |
TTGATGTTGTTCGAGATAGC+TGG | 0.507654 | 3.1:+626606 | MS.gene058757:CDS |
CTAGACAAATAAGTTTACCT+TGG | 0.508059 | 3.1:+626210 | MS.gene058757:CDS |
GAGTATCTGCAGAGCTCTGT+TGG | 0.508549 | 3.1:+631300 | MS.gene058757:CDS |
CAAACAACTCTACAAAGATA+AGG | 0.510054 | 3.1:+630799 | MS.gene058757:CDS |
TCGAGGATATTGAAGTGGTC+AGG | 0.510445 | 3.1:-631567 | None:intergenic |
TTCAGAAAACTCGTTCAGAA+AGG | 0.510465 | 3.1:+630755 | MS.gene058757:CDS |
TGAACCAATTGGCAAGTGGC+AGG | 0.513776 | 3.1:+631536 | MS.gene058757:CDS |
CTTCACGCTGATGAAAAGAA+AGG | 0.516354 | 3.1:+626260 | MS.gene058757:CDS |
GCGACTTACGTTCTGTGTTG+AGG | 0.517675 | 3.1:+631428 | MS.gene058757:CDS |
CAGCATCTTGAATGGCTTGA+CGG | 0.517828 | 3.1:-626319 | None:intergenic |
ACTTAATAGGAAGCAGCAAA+AGG | 0.520353 | 3.1:+630664 | MS.gene058757:CDS |
TTTGTTGGCTATTCCTGGTG+TGG | 0.521990 | 3.1:+630721 | MS.gene058757:CDS |
ACTCTGTTGTTGCGAGTCAC+AGG | 0.523386 | 3.1:-626533 | None:intergenic |
GGCCACCCTTGGACTTCAGA+AGG | 0.524399 | 3.1:+634114 | MS.gene058757:CDS |
ATTGGCAAGTGGCAGGATGT+TGG | 0.525269 | 3.1:+631543 | MS.gene058757:CDS |
TTCACGCTGATGAAAAGAAA+GGG | 0.525903 | 3.1:+626261 | MS.gene058757:CDS |
GCTTTCCACCTGGTAGCCAC+AGG | 0.526799 | 3.1:-634082 | None:intergenic |
TTTCATTGGCTATTCTCTGA+AGG | 0.528274 | 3.1:-631479 | None:intergenic |
TATCGAGAACAGCGCAGCCA+AGG | 0.532627 | 3.1:+629955 | MS.gene058757:intron |
AGGAAGAGAGAAGAAGAAGG+TGG | 0.532736 | 3.1:+632127 | MS.gene058757:CDS |
GGATGTTCACAGGTTTCTAT+GGG | 0.533941 | 3.1:+626135 | MS.gene058757:intron |
CGCTTGGAGAGTAGAGGAAG+GGG | 0.535821 | 3.1:+626580 | MS.gene058757:CDS |
CAGGAAAGAGAGTCTTCTGC+TGG | 0.536413 | 3.1:+631660 | MS.gene058757:CDS |
CTGCTAGAAGAAGAGACTCA+TGG | 0.538974 | 3.1:+626168 | MS.gene058757:CDS |
GAGGTAGCAGCACCTGTGGT+TGG | 0.542702 | 3.1:-634049 | None:intergenic |
AACGCTTGGAGAGTAGAGGA+AGG | 0.546781 | 3.1:+626578 | MS.gene058757:CDS |
AAATTCCTGGGACCCACACC+AGG | 0.550512 | 3.1:-630734 | None:intergenic |
AAACCATCGGGAATAAGGCC+AGG | 0.553177 | 3.1:-632055 | None:intergenic |
CAAGGATATTGAAGCCAAGA+GGG | 0.554039 | 3.1:+632470 | MS.gene058757:CDS |
TTTACCTTGGTGTTTGATGG+GGG | 0.554993 | 3.1:+626223 | MS.gene058757:CDS |
CAGCGCAGCCAAGGGTACAC+AGG | 0.559968 | 3.1:+629964 | MS.gene058757:intron |
GTGCGGAGGATCTAAAGCAT+TGG | 0.560173 | 3.1:+626672 | MS.gene058757:CDS |
TTAAGGAAGAGAGAAGAAGA+AGG | 0.564660 | 3.1:+632124 | MS.gene058757:CDS |
AAAGAGTGTTGATGAAGAAG+TGG | 0.565992 | 3.1:+631368 | MS.gene058757:CDS |
TGGCAAATCTAGTGATCAGA+TGG | 0.567752 | 3.1:+631275 | MS.gene058757:CDS |
TGAGAACGCTTGGAGAGTAG+AGG | 0.567824 | 3.1:+626574 | MS.gene058757:CDS |
TTTACTTGGTTCAAAAGCAT+AGG | 0.570995 | 3.1:+626374 | MS.gene058757:CDS |
TTATTGATGTTCATATGGAA+GGG | 0.573302 | 3.1:+626345 | MS.gene058757:CDS |
GGAGGTCGCGGAGATACTCT+AGG | 0.573426 | 3.1:-632156 | None:intergenic |
GTTTACCTTGGTGTTTGATG+GGG | 0.573943 | 3.1:+626222 | MS.gene058757:CDS |
CCATGATTACCACTGTGGGA+GGG | 0.576574 | 3.1:-632205 | None:intergenic |
TGTTGTTCGAGATAGCTGGC+TGG | 0.577785 | 3.1:+626610 | MS.gene058757:CDS |
TAAAGAGTTGTCGACATGGA+GGG | 0.578148 | 3.1:-632251 | None:intergenic |
TCTGAGATATATAAAACCAT+CGG | 0.581306 | 3.1:-632068 | None:intergenic |
ATGTCATATATGTCTGGTAG+TGG | 0.582072 | 3.1:+634140 | MS.gene058757:CDS |
TACTCCATGATTACCACTGT+GGG | 0.582414 | 3.1:-632209 | None:intergenic |
CATTGCCCTTCTGAAGTCCA+AGG | 0.584988 | 3.1:-634120 | None:intergenic |
CATAGGCACTCCTCGTGATG+TGG | 0.585009 | 3.1:+626391 | MS.gene058757:CDS |
GCCACCCTTGGACTTCAGAA+GGG | 0.586571 | 3.1:+634115 | MS.gene058757:CDS |
GAGGTGGTTCCTGAACCAAT+TGG | 0.589076 | 3.1:+631525 | MS.gene058757:CDS |
AAAGAGTTGTCGACATGGAG+GGG | 0.589208 | 3.1:-632250 | None:intergenic |
AGCCTCTTCGATTGATGGAG+AGG | 0.592683 | 3.1:+631688 | MS.gene058757:CDS |
TCCACGAAAAGCATGAGAGC+TGG | 0.595770 | 3.1:+632176 | MS.gene058757:CDS |
ATCGGGAATAAGGCCAGGCA+AGG | 0.595930 | 3.1:-632050 | None:intergenic |
CTCTCTTTCCTGCATCACCC+TGG | 0.596005 | 3.1:-631649 | None:intergenic |
ACGCTTGGAGAGTAGAGGAA+GGG | 0.596461 | 3.1:+626579 | MS.gene058757:CDS |
AGCCAATTGGATGAATGAGA+TGG | 0.598931 | 3.1:+631985 | MS.gene058757:CDS |
GACCTAACTGGCTTATCAGA+GGG | 0.601725 | 3.1:+626294 | MS.gene058757:CDS |
CAGGTGCTGCTACCTCATGA+AGG | 0.601758 | 3.1:+634056 | MS.gene058757:CDS |
ATCGGGAAATGATCAGAGGA+TGG | 0.603529 | 3.1:-626494 | None:intergenic |
CTCCTCTCCATCAATCGAAG+AGG | 0.603846 | 3.1:-631690 | None:intergenic |
TCCATGATTACCACTGTGGG+AGG | 0.604285 | 3.1:-632206 | None:intergenic |
ATCGAGAACAGCGCAGCCAA+GGG | 0.606776 | 3.1:+629956 | MS.gene058757:intron |
AGGCACTCCTCGTGATGTGG+AGG | 0.606849 | 3.1:+626394 | MS.gene058757:CDS |
CATGCATTCCAGCATTCAGA+AGG | 0.612913 | 3.1:+632318 | MS.gene058757:CDS |
CAGGTGGAAAGCCTTTCCCC+CGG | 0.613517 | 3.1:+634093 | MS.gene058757:CDS |
GTTGTTCGAGATAGCTGGCT+GGG | 0.613586 | 3.1:+626611 | MS.gene058757:CDS |
ATAGCTGGCTGGGTAGTGCA+GGG | 0.615893 | 3.1:+626621 | MS.gene058757:CDS |
ACGCTGATGAAAAGAAAGGG+AGG | 0.615898 | 3.1:+626264 | MS.gene058757:CDS |
TCATGAGGTAGCAGCACCTG+TGG | 0.616247 | 3.1:-634053 | None:intergenic |
AAGTGGATGATAATTCCTCT+GGG | 0.617994 | 3.1:+631385 | MS.gene058757:CDS |
TCACAGTCTAGAATCAATGC+AGG | 0.618620 | 3.1:-632429 | None:intergenic |
AAACTACGTATTTGTTACCA+GGG | 0.623005 | 3.1:+631632 | MS.gene058757:CDS |
CGCTGATGAAAAGAAAGGGA+GGG | 0.624251 | 3.1:+626265 | MS.gene058757:CDS |
GTAAGTCGCTTCTTCTGCAT+AGG | 0.624407 | 3.1:-631414 | None:intergenic |
AAGCGTCGAGGATATTGAAG+TGG | 0.625091 | 3.1:-631572 | None:intergenic |
CAGCAAGTTCTATCTGTCGA+AGG | 0.626856 | 3.1:+634008 | MS.gene058757:CDS |
ATACACGGTCTCTTATATCA+GGG | 0.627573 | 3.1:-632276 | None:intergenic |
CACCCTCGAGATAAAATACA+CGG | 0.637012 | 3.1:-632291 | None:intergenic |
AAGTAGTTATACTTTCAGCA+TGG | 0.639328 | 3.1:-631338 | None:intergenic |
AGACCTAACTGGCTTATCAG+AGG | 0.640787 | 3.1:+626293 | MS.gene058757:CDS |
GCCCTTCTGAAGTCCAAGGG+TGG | 0.642155 | 3.1:-634116 | None:intergenic |
CAAAATCGGGAAATGATCAG+AGG | 0.642259 | 3.1:-626498 | None:intergenic |
TGAAGTCCAAGGGTGGCCGG+GGG | 0.643695 | 3.1:-634109 | None:intergenic |
ATTGCCCTTCTGAAGTCCAA+GGG | 0.645360 | 3.1:-634119 | None:intergenic |
ATCGTAGCATGGAATTGCCG+AGG | 0.645823 | 3.1:+625843 | None:intergenic |
GCAAGGATATTGAAGCCAAG+AGG | 0.646490 | 3.1:+632469 | MS.gene058757:CDS |
GGTGTAAAGAGTTGTCGACA+TGG | 0.647270 | 3.1:-632255 | None:intergenic |
ACCCAATATTGATTTCAGCA+AGG | 0.647767 | 3.1:+632452 | MS.gene058757:CDS |
AGCCACAGGTTACCTTCATG+AGG | 0.659085 | 3.1:-634068 | None:intergenic |
TTCCTGAACCAATTGGCAAG+TGG | 0.660138 | 3.1:+631532 | MS.gene058757:CDS |
ACTGCGTGATCTCGTCGAGG+TGG | 0.663093 | 3.1:+631509 | MS.gene058757:CDS |
GTTGAGGGTAATATCAGTGT+TGG | 0.665129 | 3.1:+631444 | MS.gene058757:CDS |
CAAGCTTTCAAACTGTGCGG+AGG | 0.665763 | 3.1:+626658 | MS.gene058757:CDS |
AAATAGCCAGAACCAACCAC+AGG | 0.667625 | 3.1:+634037 | MS.gene058757:CDS |
TCTGAATGCTGGAATGCATG+TGG | 0.686716 | 3.1:-632315 | None:intergenic |
GTAAAGAGTTGTCGACATGG+AGG | 0.688565 | 3.1:-632252 | None:intergenic |
GGAATAGCCAACAAATCAGG+AGG | 0.689568 | 3.1:-630713 | None:intergenic |
TGAACTGCGTGATCTCGTCG+AGG | 0.698431 | 3.1:+631506 | MS.gene058757:CDS |
CTGCATAGGCTGCTTCCCAG+AGG | 0.699038 | 3.1:-631400 | None:intergenic |
TACCTCATGAAGGTAACCTG+TGG | 0.701825 | 3.1:+634066 | MS.gene058757:CDS |
AAGGTGTATGCATACCTCTG+TGG | 0.702954 | 3.1:-631606 | None:intergenic |
GGTAACCTGTGGCTACCAGG+TGG | 0.705128 | 3.1:+634077 | MS.gene058757:CDS |
TAACAAGCTTTCAAACTGTG+CGG | 0.705992 | 3.1:+626655 | MS.gene058757:CDS |
TGGTTATTCCCCTCCCACAG+TGG | 0.716507 | 3.1:+632196 | MS.gene058757:CDS |
ATACTCCATGATTACCACTG+TGG | 0.726663 | 3.1:-632210 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 625851 | 634166 | 625851 | ID=MS.gene058757 |
chr3.1 | mRNA | 625851 | 634166 | 625851 | ID=MS.gene058757.t1;Parent=MS.gene058757 |
chr3.1 | exon | 625851 | 625881 | 625851 | ID=MS.gene058757.t1.exon1;Parent=MS.gene058757.t1 |
chr3.1 | CDS | 625851 | 625881 | 625851 | ID=cds.MS.gene058757.t1;Parent=MS.gene058757.t1 |
chr3.1 | exon | 626147 | 626721 | 626147 | ID=MS.gene058757.t1.exon2;Parent=MS.gene058757.t1 |
chr3.1 | CDS | 626147 | 626721 | 626147 | ID=cds.MS.gene058757.t1;Parent=MS.gene058757.t1 |
chr3.1 | exon | 629967 | 630022 | 629967 | ID=MS.gene058757.t1.exon3;Parent=MS.gene058757.t1 |
chr3.1 | CDS | 629967 | 630022 | 629967 | ID=cds.MS.gene058757.t1;Parent=MS.gene058757.t1 |
chr3.1 | exon | 630664 | 630820 | 630664 | ID=MS.gene058757.t1.exon4;Parent=MS.gene058757.t1 |
chr3.1 | CDS | 630664 | 630820 | 630664 | ID=cds.MS.gene058757.t1;Parent=MS.gene058757.t1 |
chr3.1 | exon | 631270 | 631731 | 631270 | ID=MS.gene058757.t1.exon5;Parent=MS.gene058757.t1 |
chr3.1 | CDS | 631270 | 631731 | 631270 | ID=cds.MS.gene058757.t1;Parent=MS.gene058757.t1 |
chr3.1 | exon | 631962 | 632339 | 631962 | ID=MS.gene058757.t1.exon6;Parent=MS.gene058757.t1 |
chr3.1 | CDS | 631962 | 632339 | 631962 | ID=cds.MS.gene058757.t1;Parent=MS.gene058757.t1 |
chr3.1 | exon | 632426 | 632493 | 632426 | ID=MS.gene058757.t1.exon7;Parent=MS.gene058757.t1 |
chr3.1 | CDS | 632426 | 632493 | 632426 | ID=cds.MS.gene058757.t1;Parent=MS.gene058757.t1 |
chr3.1 | exon | 633965 | 634166 | 633965 | ID=MS.gene058757.t1.exon8;Parent=MS.gene058757.t1 |
chr3.1 | CDS | 633965 | 634166 | 633965 | ID=cds.MS.gene058757.t1;Parent=MS.gene058757.t1 |
Gene Sequence |
Protein sequence |