Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058793.t1 | XP_013460772.1 | 94.8 | 496 | 24 | 2 | 1 | 496 | 1 | 494 | 1.70E-275 | 958 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058793.t1 | Q54ND5 | 24.5 | 457 | 277 | 9 | 58 | 465 | 102 | 539 | 1.9e-33 | 145.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058793.t1 | A0A072UZE6 | 94.8 | 496 | 24 | 2 | 1 | 496 | 1 | 494 | 1.2e-275 | 958.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058792 | MS.gene058793 | 0.974743 | 1.07E-138 | -1.69E-46 |
| MS.gene058793 | MS.gene52851 | 0.930043 | 2.90E-93 | -1.69E-46 |
| MS.gene058793 | MS.gene52855 | 0.900184 | 9.44E-78 | -1.69E-46 |
| MS.gene058793 | MS.gene52856 | 0.974965 | 4.30E-139 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058793.t1 | MTR_3g071580 | 94.758 | 496 | 24 | 2 | 1 | 496 | 1 | 494 | 0.0 | 938 |
| MS.gene058793.t1 | MTR_3g071580 | 94.501 | 491 | 25 | 2 | 1 | 491 | 1 | 489 | 0.0 | 925 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058793.t1 | AT1G09870 | 64.549 | 488 | 157 | 4 | 2 | 484 | 3 | 479 | 0.0 | 665 |
Find 114 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTCCATTTGAAGTATTTA+AGG | 0.128114 | 3.3:-1472603 | MS.gene058793:intron |
| GCTCCAAAGGTTTCTCCTTC+TGG | 0.189619 | 3.3:+1472975 | None:intergenic |
| TCTGCATTAGTTGGGCGATA+TGG | 0.221007 | 3.3:-1474913 | MS.gene058793:CDS |
| AACAAACTAAAATTCATCTT+TGG | 0.224993 | 3.3:+1472325 | None:intergenic |
| CCTTGGCAAGGAAGGCTTAA+AGG | 0.244002 | 3.3:-1476177 | MS.gene058793:CDS |
| AGAGTTCCGTCTTGGTTAAA+TGG | 0.267555 | 3.3:-1476210 | MS.gene058793:CDS |
| ACCACAAGGTTTAAATGAAT+TGG | 0.278023 | 3.3:+1477032 | None:intergenic |
| CTCACCTGAGTTGCCTTTAT+AGG | 0.288772 | 3.3:+1476048 | None:intergenic |
| GGTTACGATAGTAGGATTTC+AGG | 0.291373 | 3.3:-1474993 | MS.gene058793:intron |
| ACAAACTAAAATTCATCTTT+GGG | 0.293290 | 3.3:+1472326 | None:intergenic |
| ATCCATGGAGCAAGCTATTA+AGG | 0.308600 | 3.3:-1474166 | MS.gene058793:CDS |
| TCCTTAAGTCTATCAACTTC+GGG | 0.308723 | 3.3:+1474958 | None:intergenic |
| AAAAGAGCGGAAATTGTCTT+TGG | 0.330350 | 3.3:-1476235 | MS.gene058793:CDS |
| GGATAATTTGTCAGCTCAAC+TGG | 0.331316 | 3.3:-1476277 | MS.gene058793:CDS |
| TCAGCTAGTGCTGTGGCATT+TGG | 0.337150 | 3.3:-1475748 | MS.gene058793:CDS |
| TAGACTTAAGGAACCTATCT+TGG | 0.351543 | 3.3:-1474947 | MS.gene058793:CDS |
| GCGTTTATTCTAAAGGGTTA+TGG | 0.369605 | 3.3:-1474240 | MS.gene058793:CDS |
| CTGCATTAGTTGGGCGATAT+GGG | 0.371019 | 3.3:-1474912 | MS.gene058793:CDS |
| GGTTTATTTCTTGAAGAGTC+TGG | 0.374217 | 3.3:-1473114 | MS.gene058793:intron |
| AGCCTCCACAGAAAAGAAAA+TGG | 0.377131 | 3.3:-1472943 | MS.gene058793:CDS |
| GTGTATATAGATTACATTGC+TGG | 0.383792 | 3.3:-1474283 | MS.gene058793:intron |
| AATTATACGAACTTGGAATC+AGG | 0.387815 | 3.3:-1476125 | MS.gene058793:CDS |
| TTCAGTGGCAATGGAACTCT+TGG | 0.391689 | 3.3:-1475715 | MS.gene058793:CDS |
| TCCAGACATATATCCTATAA+AGG | 0.391852 | 3.3:-1476061 | MS.gene058793:CDS |
| GAGATTACATCTGCATTAGT+TGG | 0.394671 | 3.3:-1474922 | MS.gene058793:CDS |
| AAATCACTAAATTATAGAAT+GGG | 0.395225 | 3.3:-1474216 | MS.gene058793:CDS |
| GACACCTTAAATACTTCAAA+TGG | 0.399416 | 3.3:+1472599 | None:intergenic |
| GTCCCATTCTCATGTCTGCT+TGG | 0.401122 | 3.3:-1473135 | MS.gene058793:CDS |
| AAGCTTACAGGCATTGGAAT+GGG | 0.405845 | 3.3:+1472806 | None:intergenic |
| TTGGAGGCGTTTATTCTAAA+GGG | 0.408639 | 3.3:-1474246 | MS.gene058793:CDS |
| CTTGGAGGCGTTTATTCTAA+AGG | 0.419192 | 3.3:-1474247 | MS.gene058793:CDS |
| AACATCTCTCCACCGTCTCC+AGG | 0.430519 | 3.3:-1477188 | MS.gene058793:intron |
| TCTCTGGTTCTTATGTAAAC+AGG | 0.431034 | 3.3:-1474860 | MS.gene058793:intron |
| TTCCTTAAGTCTATCAACTT+CGG | 0.436190 | 3.3:+1474957 | None:intergenic |
| CTGTATAGTTGTCCTGCGTC+AGG | 0.438844 | 3.3:-1472875 | MS.gene058793:CDS |
| CTCAACTGGATGTTCTTGTA+AGG | 0.439096 | 3.3:-1476263 | MS.gene058793:CDS |
| GGCAATGGAACTCTTGGAAC+TGG | 0.447948 | 3.3:-1475709 | MS.gene058793:CDS |
| TAAATCACTAAATTATAGAA+TGG | 0.454360 | 3.3:-1474217 | MS.gene058793:CDS |
| CACAGCACTAGCTGATGCTC+GGG | 0.455439 | 3.3:+1475756 | None:intergenic |
| CTACAAAAGCTTACAGGCAT+TGG | 0.460567 | 3.3:+1472800 | None:intergenic |
| GGAAATCTCCTTGGCAAGGA+AGG | 0.464112 | 3.3:-1476185 | MS.gene058793:CDS |
| CTGACGCAGGACAACTATAC+AGG | 0.473699 | 3.3:+1472876 | None:intergenic |
| CTCCGACAAAGAAAAGGATA+AGG | 0.475675 | 3.3:-1476305 | MS.gene058793:CDS |
| AATCCAGAAGGAGAAACCTT+TGG | 0.476956 | 3.3:-1472978 | MS.gene058793:CDS |
| ATCATGCTCCGCGAGGGCTT+CGG | 0.477499 | 3.3:+1472395 | None:intergenic |
| ACCCGAAGTTGATAGACTTA+AGG | 0.479122 | 3.3:-1474959 | MS.gene058793:CDS |
| TTCCGTCTTGGTTAAATGGA+TGG | 0.483104 | 3.3:-1476206 | MS.gene058793:CDS |
| ATAACAGGAAGCATCCTTGT+TGG | 0.485453 | 3.3:-1474693 | MS.gene058793:intron |
| TTGGAATCAGGATTAGAGAA+AGG | 0.488890 | 3.3:-1476113 | MS.gene058793:CDS |
| TAGTGCTGTGGCATTTGGAA+TGG | 0.489961 | 3.3:-1475743 | MS.gene058793:CDS |
| GGCTTTGGAGGTAGCTCCAA+AGG | 0.490471 | 3.3:+1472962 | None:intergenic |
| AGTGCTGTGGCATTTGGAAT+GGG | 0.491271 | 3.3:-1475742 | MS.gene058793:CDS |
| CTCGTTCTCCGACAAAGAAA+AGG | 0.491299 | 3.3:-1476311 | MS.gene058793:CDS |
| CTTTGGAGAGAGTTCCGTCT+TGG | 0.491832 | 3.3:-1476218 | MS.gene058793:CDS |
| AAAGAAAAGGATAAGGGAGT+TGG | 0.492650 | 3.3:-1476298 | MS.gene058793:CDS |
| TATTCACTGCAGGGTTGTCA+TGG | 0.494935 | 3.3:-1472635 | MS.gene058793:intron |
| AGATTACATCTGCATTAGTT+GGG | 0.499233 | 3.3:-1474921 | MS.gene058793:CDS |
| TCCACAGAAAAGAAAATGGC+GGG | 0.499586 | 3.3:-1472939 | MS.gene058793:CDS |
| TCCAATTCATTTAAACCTTG+TGG | 0.499872 | 3.3:-1477033 | MS.gene058793:intron |
| GCCTTTATAGGATATATGTC+TGG | 0.504217 | 3.3:+1476060 | None:intergenic |
| AACCAAGCAGACATGAGAAT+GGG | 0.505960 | 3.3:+1473133 | None:intergenic |
| CAGTTTCTGCATGAGCAAAC+CGG | 0.507648 | 3.3:+1473160 | None:intergenic |
| GGCATATTACATCATCTCTC+TGG | 0.508982 | 3.3:-1474876 | MS.gene058793:CDS |
| TGAAGATGTTGTTCAATCCA+TGG | 0.509427 | 3.3:-1474181 | MS.gene058793:CDS |
| AGCATGTTGTTACCAGCAAA+AGG | 0.511702 | 3.3:+1472902 | None:intergenic |
| GATGTAATCTCATCCAAGAT+AGG | 0.518769 | 3.3:+1474934 | None:intergenic |
| AAACCAAGCAGACATGAGAA+TGG | 0.520129 | 3.3:+1473132 | None:intergenic |
| CCACAGCACTAGCTGATGCT+CGG | 0.526889 | 3.3:+1475755 | None:intergenic |
| GAGGAAGAATTATACGAACT+TGG | 0.526932 | 3.3:-1476132 | MS.gene058793:CDS |
| GGGTTGTCACCTTTCCCTAG+TGG | 0.528747 | 3.3:+1472347 | None:intergenic |
| TGGAATATCATGCTCCGCGA+GGG | 0.537062 | 3.3:+1472389 | None:intergenic |
| CAAGCTATTAAGGCTGAAGA+AGG | 0.544813 | 3.3:-1474156 | MS.gene058793:intron |
| TTCCATCCATTTAACCAAGA+CGG | 0.547637 | 3.3:+1476204 | None:intergenic |
| CCTTTAAGCCTTCCTTGCCA+AGG | 0.550309 | 3.3:+1476177 | None:intergenic |
| TGAACAACATCTTCAAGTAA+TGG | 0.551000 | 3.3:+1474189 | None:intergenic |
| AAATCTCAGCAAGATGTCAC+TGG | 0.554670 | 3.3:+1475648 | None:intergenic |
| TAAATGGATGGAAATCTCCT+TGG | 0.554988 | 3.3:-1476194 | MS.gene058793:CDS |
| ACTACAAAAGTACCTCCAAT+GGG | 0.557015 | 3.3:+1474639 | None:intergenic |
| AAAGCTTACAGGCATTGGAA+TGG | 0.558496 | 3.3:+1472805 | None:intergenic |
| TCCGACAAAGAAAAGGATAA+GGG | 0.559478 | 3.3:-1476304 | MS.gene058793:CDS |
| AGCCTTAATAGCTTGCTCCA+TGG | 0.564475 | 3.3:+1474164 | None:intergenic |
| ATATCCTATAAAGGCAACTC+AGG | 0.566710 | 3.3:-1476052 | MS.gene058793:intron |
| TTGAGAAATGTAAAATCGAA+AGG | 0.568997 | 3.3:+1477244 | None:intergenic |
| GACTACAAAAGTACCTCCAA+TGG | 0.570542 | 3.3:+1474638 | None:intergenic |
| GTTCCTTCTAAAATTCCTCA+AGG | 0.574019 | 3.3:-1477062 | MS.gene058793:CDS |
| TTACATTCCCAGGCAAGGCA+TGG | 0.576004 | 3.3:-1476336 | MS.gene058793:intron |
| TATAGATTACATTGCTGGAG+TGG | 0.578859 | 3.3:-1474278 | MS.gene058793:intron |
| GCTGGAGTGGACAGATGACT+TGG | 0.580590 | 3.3:-1474265 | MS.gene058793:CDS |
| TTATAGGATATATGTCTGGA+TGG | 0.582429 | 3.3:+1476064 | None:intergenic |
| TGATTGTTGTCATAACTACA+AGG | 0.582799 | 3.3:-1475623 | MS.gene058793:intron |
| CAAACTAAAATTCATCTTTG+GGG | 0.598005 | 3.3:+1472327 | None:intergenic |
| GGCGGTGAGCTAATTAAACT+AGG | 0.601575 | 3.3:-1476156 | MS.gene058793:CDS |
| TCAACTGGATGTTCTTGTAA+GGG | 0.604338 | 3.3:-1476262 | MS.gene058793:CDS |
| TGATATTCCAAATATTTCAG+TGG | 0.604907 | 3.3:-1472376 | MS.gene058793:CDS |
| GGATGGAAATCTCCTTGGCA+AGG | 0.610408 | 3.3:-1476189 | MS.gene058793:CDS |
| AATCACTAAATTATAGAATG+GGG | 0.619098 | 3.3:-1474215 | MS.gene058793:CDS |
| AGCAAGAGCCGAAGCCCTCG+CGG | 0.619488 | 3.3:-1472403 | MS.gene058793:CDS |
| GGAGTGGACAGATGACTTGG+AGG | 0.620597 | 3.3:-1474262 | MS.gene058793:CDS |
| AGCTTACAGGCATTGGAATG+GGG | 0.624158 | 3.3:+1472807 | None:intergenic |
| AGAGTTTGACAAAATCCAGA+AGG | 0.633058 | 3.3:-1472990 | MS.gene058793:CDS |
| CCGAGCATCAGCTAGTGCTG+TGG | 0.634420 | 3.3:-1475755 | MS.gene058793:CDS |
| TAATCCTCGTCAAACAAACT+CGG | 0.636648 | 3.3:+1476087 | None:intergenic |
| CTCCACAGAAAAGAAAATGG+CGG | 0.637496 | 3.3:-1472940 | MS.gene058793:CDS |
| TGAGCTAATTAAACTAGGAG+AGG | 0.639606 | 3.3:-1476151 | MS.gene058793:CDS |
| ACAGCACTAGCTGATGCTCG+GGG | 0.659608 | 3.3:+1475757 | None:intergenic |
| GTTTCCGAGTTTGTTTGACG+AGG | 0.659643 | 3.3:-1476091 | MS.gene058793:CDS |
| TGAATTGGAGTACATCCTTG+AGG | 0.660520 | 3.3:+1477047 | None:intergenic |
| TTGGAATATCATGCTCCGCG+AGG | 0.669168 | 3.3:+1472388 | None:intergenic |
| CCACAGAAAAGAAAATGGCG+GGG | 0.671932 | 3.3:-1472938 | MS.gene058793:CDS |
| TCATAGTCATGCTTCTGATG+AGG | 0.679963 | 3.3:+1472443 | None:intergenic |
| TTGTAAGGGATGTAAAAGAG+CGG | 0.687987 | 3.3:-1476248 | MS.gene058793:CDS |
| AAAATGGCGGGGTAGCAGTG+TGG | 0.701485 | 3.3:-1472927 | MS.gene058793:CDS |
| TTGATCAGTTATATCCAACA+AGG | 0.711218 | 3.3:+1474679 | None:intergenic |
| TGGCAAGGAAGGCTTAAAGG+CGG | 0.730530 | 3.3:-1476174 | MS.gene058793:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATATAACCATAAAAA+AGG | + | chr3.3:1474599-1474618 | None:intergenic | 10.0% |
| !! | AATAAAATTTAAAAAATGTC+AGG | - | chr3.3:1475054-1475073 | MS.gene058793:intron | 10.0% |
| !! | TAATTAATTATGAAATATGT+TGG | - | chr3.3:1472645-1472664 | MS.gene058793:intron | 10.0% |
| !! | TATTTAAATAATATTTACAG+AGG | + | chr3.3:1475038-1475057 | None:intergenic | 10.0% |
| !! | AAAGAAACTAAATTAGTAAA+AGG | - | chr3.3:1475147-1475166 | MS.gene058793:intron | 15.0% |
| !! | AAAGAAGATTAAAATCAATA+TGG | + | chr3.3:1476001-1476020 | None:intergenic | 15.0% |
| !! | AAATCACTAAATTATAGAAT+GGG | - | chr3.3:1475400-1475419 | MS.gene058793:intron | 15.0% |
| !! | AACATACATAAAATATAAGT+GGG | + | chr3.3:1473115-1473134 | None:intergenic | 15.0% |
| !! | AAGAAACTAAATTAGTAAAA+GGG | - | chr3.3:1475148-1475167 | MS.gene058793:intron | 15.0% |
| !! | GCAAATATGTATATAAATAT+AGG | + | chr3.3:1475528-1475547 | None:intergenic | 15.0% |
| !! | TAAATCACTAAATTATAGAA+TGG | - | chr3.3:1475399-1475418 | MS.gene058793:intron | 15.0% |
| !! | TAATCTATATACACATAATT+TGG | + | chr3.3:1475327-1475346 | None:intergenic | 15.0% |
| !! | TTATGGTTATATAATTTCTT+TGG | - | chr3.3:1474602-1474621 | MS.gene058793:intron | 15.0% |
| !!! | ATGTTGGTTATATATATAAT+AGG | - | chr3.3:1472661-1472680 | MS.gene058793:intron | 15.0% |
| !!! | TATTGATAGTTTAAACTATT+GGG | - | chr3.3:1473202-1473221 | MS.gene058793:intron | 15.0% |
| !!! | TATTTTATTTGTATTCCTTT+TGG | - | chr3.3:1476066-1476085 | MS.gene058793:CDS | 15.0% |
| !!! | TTATTGATAGTTTAAACTAT+TGG | - | chr3.3:1473201-1473220 | MS.gene058793:intron | 15.0% |
| !!! | TTCTCATTGTTTTAATTTAA+TGG | - | chr3.3:1476219-1476238 | MS.gene058793:CDS | 15.0% |
| !!! | TTTAGCATTTTTTAATATTG+AGG | - | chr3.3:1475486-1475505 | MS.gene058793:intron | 15.0% |
| !! | AACAATAACTTATATGCATT+TGG | + | chr3.3:1475191-1475210 | None:intergenic | 20.0% |
| !! | AACTATCAATAATAACAAGT+TGG | + | chr3.3:1473193-1473212 | None:intergenic | 20.0% |
| !! | AATCACTAAATTATAGAATG+GGG | - | chr3.3:1475401-1475420 | MS.gene058793:intron | 20.0% |
| !! | AATTCCAGTTAGTATATAAT+TGG | - | chr3.3:1476195-1476214 | MS.gene058793:CDS | 20.0% |
| !! | AATTTGTGATGATTTATAAC+AGG | - | chr3.3:1474908-1474927 | MS.gene058793:CDS | 20.0% |
| !! | AGAAACTAAATTAGTAAAAG+GGG | - | chr3.3:1475149-1475168 | MS.gene058793:intron | 20.0% |
| !! | ATATAATCATTTCAAAGTGT+TGG | + | chr3.3:1472755-1472774 | None:intergenic | 20.0% |
| !! | CAACATACATAAAATATAAG+TGG | + | chr3.3:1473116-1473135 | None:intergenic | 20.0% |
| !! | GAATAAAATTTATCACTGAA+AGG | + | chr3.3:1474251-1474270 | None:intergenic | 20.0% |
| !! | GACACTAATATTTATGAAAT+TGG | + | chr3.3:1474116-1474135 | None:intergenic | 20.0% |
| !! | GTAATATTAATTCTCCATAA+CGG | + | chr3.3:1476304-1476323 | None:intergenic | 20.0% |
| !! | TAAGTTTCAGAAATATCAAA+CGG | + | chr3.3:1473811-1473830 | None:intergenic | 20.0% |
| !! | TAATATTAATTCTCCATAAC+GGG | + | chr3.3:1476303-1476322 | None:intergenic | 20.0% |
| !! | TGTTATAAATCATCACAAAT+TGG | + | chr3.3:1474909-1474928 | None:intergenic | 20.0% |
| !! | TTTCATGCTTTATAAGAAAA+TGG | - | chr3.3:1475974-1475993 | MS.gene058793:intron | 20.0% |
| !!! | AACTATGCATTTTTTAATAG+CGG | - | chr3.3:1476109-1476128 | MS.gene058793:CDS | 20.0% |
| !!! | TATATTTTATGTATGTTGCT+TGG | - | chr3.3:1473118-1473137 | MS.gene058793:CDS | 20.0% |
| !!! | TTAAGAAGCATATTTACAAA+TGG | + | chr3.3:1474138-1474157 | None:intergenic | 20.0% |
| ! | AATATGAAGTGTGTTTAAAG+AGG | - | chr3.3:1474467-1474486 | MS.gene058793:intron | 25.0% |
| ! | ACAACCTTTATTGATGTTTA+TGG | - | chr3.3:1476269-1476288 | MS.gene058793:CDS | 25.0% |
| ! | ATAAAAACCTGTCATGTATT+AGG | + | chr3.3:1473016-1473035 | None:intergenic | 25.0% |
| ! | CAACCTTTATTGATGTTTAT+GGG | - | chr3.3:1476270-1476289 | MS.gene058793:CDS | 25.0% |
| ! | CATTACATTAGTGACAAATA+TGG | + | chr3.3:1474356-1474375 | None:intergenic | 25.0% |
| ! | TAAAAGAAGAAAAGAACACA+GGG | + | chr3.3:1474819-1474838 | None:intergenic | 25.0% |
| ! | TACATCTATGTTCTAACTAT+TGG | + | chr3.3:1472949-1472968 | None:intergenic | 25.0% |
| ! | TATATACATATTTGCTCTTC+AGG | - | chr3.3:1475533-1475552 | MS.gene058793:intron | 25.0% |
| ! | TATGTTAAATCTCCATCAAA+CGG | + | chr3.3:1474319-1474338 | None:intergenic | 25.0% |
| ! | TATTTGTCACTAATGTAATG+AGG | - | chr3.3:1474356-1474375 | MS.gene058793:intron | 25.0% |
| ! | TGATATTCCAAATATTTCAG+TGG | - | chr3.3:1477240-1477259 | MS.gene058793:CDS | 25.0% |
| ! | TGCATAGTTCAAGAAAATAT+AGG | + | chr3.3:1476098-1476117 | None:intergenic | 25.0% |
| ! | TGTAATCAGTTATCATATCA+AGG | + | chr3.3:1475128-1475147 | None:intergenic | 25.0% |
| ! | TTAAAAGAAGAAAAGAACAC+AGG | + | chr3.3:1474820-1474839 | None:intergenic | 25.0% |
| ! | TTACTAACTACTAACTTTAG+AGG | + | chr3.3:1475614-1475633 | None:intergenic | 25.0% |
| ! | TTATTGTGAATAGCTGAATT+TGG | - | chr3.3:1476881-1476900 | MS.gene058793:intron | 25.0% |
| ! | TTGAGAAATGTAAAATCGAA+AGG | + | chr3.3:1472375-1472394 | None:intergenic | 25.0% |
| !! | AAAGACTATTTTCACAAAGT+GGG | + | chr3.3:1473065-1473084 | None:intergenic | 25.0% |
| !! | ATTTTATGCAGTTGAAATGA+AGG | - | chr3.3:1473147-1473166 | MS.gene058793:CDS | 25.0% |
| !! | GTAATTTTCTCAACAATTGA+AGG | - | chr3.3:1472605-1472624 | MS.gene058793:CDS | 25.0% |
| !! | TAATACATGACAGGTTTTTA+TGG | - | chr3.3:1473015-1473034 | MS.gene058793:intron | 25.0% |
| !! | TGATTGTTAATTTTCTTCGT+AGG | - | chr3.3:1472495-1472514 | MS.gene058793:intron | 25.0% |
| !! | TTTTATGCAGTTGAAATGAA+GGG | - | chr3.3:1473148-1473167 | MS.gene058793:CDS | 25.0% |
| !! | TTTTATTCCATTTTGCTAGA+AGG | - | chr3.3:1474263-1474282 | MS.gene058793:CDS | 25.0% |
| !!! | ACTAATATTTTTTGAGGAGT+CGG | - | chr3.3:1473665-1473684 | MS.gene058793:intron | 25.0% |
| !!! | ATTATTTTGTGCAAAAGAGT+GGG | + | chr3.3:1477051-1477070 | None:intergenic | 25.0% |
| !!! | ATTGGCACTAATATTTTTTG+AGG | - | chr3.3:1473659-1473678 | MS.gene058793:intron | 25.0% |
| !!! | GATTTGCTCTTTTGAATTTT+TGG | - | chr3.3:1473618-1473637 | MS.gene058793:intron | 25.0% |
| !!! | TTATTTCTGGACCTTTTTTA+TGG | - | chr3.3:1474585-1474604 | MS.gene058793:intron | 25.0% |
| AAAAAATGGAAATGAGCCAA+AGG | + | chr3.3:1476385-1476404 | None:intergenic | 30.0% | |
| AAGTGAATTACTCACTTTAG+AGG | - | chr3.3:1475748-1475767 | MS.gene058793:CDS | 30.0% | |
| AATTATACGAACTTGGAATC+AGG | - | chr3.3:1473491-1473510 | MS.gene058793:intron | 30.0% | |
| AATTATCATACTCTTCCGTT+TGG | + | chr3.3:1473248-1473267 | None:intergenic | 30.0% | |
| ACCACAAGGTTTAAATGAAT+TGG | + | chr3.3:1472587-1472606 | None:intergenic | 30.0% | |
| ACTTCATATTCAACCAATGA+AGG | + | chr3.3:1474457-1474476 | None:intergenic | 30.0% | |
| AGATTACATCTGCATTAGTT+GGG | - | chr3.3:1474695-1474714 | MS.gene058793:intron | 30.0% | |
| ATAATCAATTACTAGTGTCG+TGG | - | chr3.3:1474848-1474867 | MS.gene058793:intron | 30.0% | |
| ATCATCACAAATTGGACAAT+TGG | + | chr3.3:1474901-1474920 | None:intergenic | 30.0% | |
| ATCATTGTGCAGGATTAATT+TGG | - | chr3.3:1477085-1477104 | MS.gene058793:CDS | 30.0% | |
| ATTTCTTTGGTTACGATAGT+AGG | - | chr3.3:1474615-1474634 | MS.gene058793:intron | 30.0% | |
| CAACCCATAAACATCAATAA+AGG | + | chr3.3:1476276-1476295 | None:intergenic | 30.0% | |
| CAGTTTGATCAAACTAGTAA+AGG | + | chr3.3:1475851-1475870 | None:intergenic | 30.0% | |
| CCAAAGATAAACCATAAAAC+TGG | + | chr3.3:1472992-1473011 | None:intergenic | 30.0% | |
| CTACAGGAGCAATAAAAAAA+TGG | + | chr3.3:1476399-1476418 | None:intergenic | 30.0% | |
| CTAGAAGGAAAAAATGAAGA+TGG | + | chr3.3:1473595-1473614 | None:intergenic | 30.0% | |
| GAAAAAGCCACTGAAATATT+TGG | + | chr3.3:1477250-1477269 | None:intergenic | 30.0% | |
| GAACATGACGACTTTAATAT+AGG | + | chr3.3:1475565-1475584 | None:intergenic | 30.0% | |
| GAAGCCAATTATATACTAAC+TGG | + | chr3.3:1476202-1476221 | None:intergenic | 30.0% | |
| GACACCTTAAATACTTCAAA+TGG | + | chr3.3:1477020-1477039 | None:intergenic | 30.0% | |
| GCAAAATTGTGATAGAATGT+TGG | + | chr3.3:1472459-1472478 | None:intergenic | 30.0% | |
| GCTATTCACAATAAAACCAT+TGG | + | chr3.3:1476875-1476894 | None:intergenic | 30.0% | |
| GTGTATATAGATTACATTGC+TGG | - | chr3.3:1475333-1475352 | MS.gene058793:intron | 30.0% | |
| TAATGTTGTAGAGACATTGT+TGG | - | chr3.3:1474016-1474035 | MS.gene058793:intron | 30.0% | |
| TAGTGTCTGTAGTTTATTTC+TGG | - | chr3.3:1474572-1474591 | MS.gene058793:intron | 30.0% | |
| TATATGACAATGTGAACCTT+TGG | - | chr3.3:1476366-1476385 | MS.gene058793:intron | 30.0% | |
| TCCAATTCATTTAAACCTTG+TGG | - | chr3.3:1472583-1472602 | MS.gene058793:intron | 30.0% | |
| TCCAGACATATATCCTATAA+AGG | - | chr3.3:1473555-1473574 | MS.gene058793:intron | 30.0% | |
| TCTTGAGTTACTTACTTGTT+TGG | - | chr3.3:1472775-1472794 | MS.gene058793:intron | 30.0% | |
| TGAACAACATCTTCAAGTAA+TGG | + | chr3.3:1475430-1475449 | None:intergenic | 30.0% | |
| TGATGTGATATGTGATCAAA+TGG | - | chr3.3:1475002-1475021 | MS.gene058793:intron | 30.0% | |
| TGATTGTTGTCATAACTACA+AGG | - | chr3.3:1473993-1474012 | MS.gene058793:intron | 30.0% | |
| TTATAGGATATATGTCTGGA+TGG | + | chr3.3:1473555-1473574 | None:intergenic | 30.0% | |
| TTATCTTGATGCATGTCAAT+TGG | - | chr3.3:1473641-1473660 | MS.gene058793:intron | 30.0% | |
| TTCCTTAAGTCTATCAACTT+CGG | + | chr3.3:1474662-1474681 | None:intergenic | 30.0% | |
| TTGATCAGTTATATCCAACA+AGG | + | chr3.3:1474940-1474959 | None:intergenic | 30.0% | |
| TTGTTGAGAAAATTACCACA+AGG | + | chr3.3:1472601-1472620 | None:intergenic | 30.0% | |
| TTTATCACTGAAAGGAACAT+AGG | + | chr3.3:1474243-1474262 | None:intergenic | 30.0% | |
| ! | AAATATAGGCTTTAGCCAAA+AGG | + | chr3.3:1476084-1476103 | None:intergenic | 30.0% |
| ! | ATTGGACATTTTGTGATCTT+CGG | - | chr3.3:1474537-1474556 | MS.gene058793:intron | 30.0% |
| ! | CAAAGACTATTTTCACAAAG+TGG | + | chr3.3:1473066-1473085 | None:intergenic | 30.0% |
| ! | CTGTCCATTTGAAGTATTTA+AGG | - | chr3.3:1477013-1477032 | MS.gene058793:intron | 30.0% |
| ! | GTTAATTTTCTTCGTAGGTA+CGG | - | chr3.3:1472500-1472519 | MS.gene058793:intron | 30.0% |
| ! | TCATTTTCTGCTTACAGTTT+AGG | + | chr3.3:1472814-1472833 | None:intergenic | 30.0% |
| !! | ATGTCAGAGTTATTTTCCAA+TGG | - | chr3.3:1476856-1476875 | MS.gene058793:intron | 30.0% |
| !! | CCAGTTTTATGGTTTATCTT+TGG | - | chr3.3:1472989-1473008 | MS.gene058793:CDS | 30.0% |
| !! | GATATGGGTTGAATTTTACA+AGG | - | chr3.3:1474719-1474738 | MS.gene058793:intron | 30.0% |
| !! | GATTATTTTGTGCAAAAGAG+TGG | + | chr3.3:1477052-1477071 | None:intergenic | 30.0% |
| !! | TTAGCTCTATTGATGTGAAT+TGG | - | chr3.3:1474519-1474538 | MS.gene058793:intron | 30.0% |
| !! | TTATTTTGTGCAAAAGAGTG+GGG | + | chr3.3:1477050-1477069 | None:intergenic | 30.0% |
| !!! | CATCTTCATTTTTTCCTTCT+AGG | - | chr3.3:1473593-1473612 | MS.gene058793:intron | 30.0% |
| !!! | CTAATATTTTTTGAGGAGTC+GGG | - | chr3.3:1473666-1473685 | MS.gene058793:intron | 30.0% |
| !!! | TGGTTTTATTGCAAAGTAGT+GGG | - | chr3.3:1476573-1476592 | MS.gene058793:intron | 30.0% |
| !!! | TTGGTTTTATTGCAAAGTAG+TGG | - | chr3.3:1476572-1476591 | MS.gene058793:intron | 30.0% |
| AAAAGAGCGGAAATTGTCTT+TGG | - | chr3.3:1473381-1473400 | MS.gene058793:intron | 35.0% | |
| AAAGAAAAGGATAAGGGAGT+TGG | - | chr3.3:1473318-1473337 | MS.gene058793:intron | 35.0% | |
| AAAGAGCAAATCTACCTAGA+AGG | + | chr3.3:1473610-1473629 | None:intergenic | 35.0% | |
| ACTTATGCATCTCTCTTATC+TGG | - | chr3.3:1473826-1473845 | MS.gene058793:intron | 35.0% | |
| AGAACACAGGGAAAATCAAA+AGG | + | chr3.3:1474807-1474826 | None:intergenic | 35.0% | |
| AGAGTTTGACAAAATCCAGA+AGG | - | chr3.3:1476626-1476645 | MS.gene058793:intron | 35.0% | |
| ATATCCTATAAAGGCAACTC+AGG | - | chr3.3:1473564-1473583 | MS.gene058793:intron | 35.0% | |
| ATCTCTCTTATCTGGCAAAT+AGG | - | chr3.3:1473834-1473853 | MS.gene058793:intron | 35.0% | |
| CAAGAACTACAAAAGCTTAC+AGG | + | chr3.3:1476825-1476844 | None:intergenic | 35.0% | |
| CATGCATAACAACTCATTAG+TGG | + | chr3.3:1475666-1475685 | None:intergenic | 35.0% | |
| CTTGTGTTAATAGAGGATGT+CGG | - | chr3.3:1472888-1472907 | MS.gene058793:CDS | 35.0% | |
| GAGATTACATCTGCATTAGT+TGG | - | chr3.3:1474694-1474713 | MS.gene058793:intron | 35.0% | |
| GAGGAAGAATTATACGAACT+TGG | - | chr3.3:1473484-1473503 | MS.gene058793:intron | 35.0% | |
| GATAGAATGTTGGAAAAACC+TGG | + | chr3.3:1472449-1472468 | None:intergenic | 35.0% | |
| GATGTAATCTCATCCAAGAT+AGG | + | chr3.3:1474685-1474704 | None:intergenic | 35.0% | |
| GATGTAGAGCAAGATTAAGA+AGG | - | chr3.3:1472963-1472982 | MS.gene058793:CDS | 35.0% | |
| GCACAAAATAATCATTGTGC+AGG | - | chr3.3:1477059-1477078 | MS.gene058793:CDS | 35.0% | |
| GCCTTTATAGGATATATGTC+TGG | + | chr3.3:1473559-1473578 | None:intergenic | 35.0% | |
| GTAGGATTTCAGGAAAAAGA+AGG | - | chr3.3:1474633-1474652 | MS.gene058793:intron | 35.0% | |
| GTGATCTTCGGTATTCTTAT+AGG | - | chr3.3:1474549-1474568 | MS.gene058793:intron | 35.0% | |
| GTTTGCATTGCTAATGCAAA+TGG | - | chr3.3:1472716-1472735 | MS.gene058793:intron | 35.0% | |
| TAAATGGATGGAAATCTCCT+TGG | - | chr3.3:1473422-1473441 | MS.gene058793:intron | 35.0% | |
| TAATCCTCGTCAAACAAACT+CGG | + | chr3.3:1473532-1473551 | None:intergenic | 35.0% | |
| TAATGTAATGAGGCCTTCAT+TGG | - | chr3.3:1474366-1474385 | MS.gene058793:intron | 35.0% | |
| TAGACTTAAGGAACCTATCT+TGG | - | chr3.3:1474669-1474688 | MS.gene058793:CDS | 35.0% | |
| TAGCTCTCTCACATATAAAC+AGG | - | chr3.3:1475236-1475255 | MS.gene058793:intron | 35.0% | |
| TATAGATTACATTGCTGGAG+TGG | - | chr3.3:1475338-1475357 | MS.gene058793:intron | 35.0% | |
| TATCAGAAATCCTCTTGTCT+GGG | + | chr3.3:1474045-1474064 | None:intergenic | 35.0% | |
| TCAACTGGATGTTCTTGTAA+GGG | - | chr3.3:1473354-1473373 | MS.gene058793:intron | 35.0% | |
| TCCGACAAAGAAAAGGATAA+GGG | - | chr3.3:1473312-1473331 | MS.gene058793:intron | 35.0% | |
| TCCTTAAGTCTATCAACTTC+GGG | + | chr3.3:1474661-1474680 | None:intergenic | 35.0% | |
| TGAAGATGTTGTTCAATCCA+TGG | - | chr3.3:1475435-1475454 | MS.gene058793:intron | 35.0% | |
| TGAGCTAATTAAACTAGGAG+AGG | - | chr3.3:1473465-1473484 | MS.gene058793:intron | 35.0% | |
| TGTTGTGATATGCTAACTGT+TGG | - | chr3.3:1476037-1476056 | MS.gene058793:intron | 35.0% | |
| TTCCATCCATTTAACCAAGA+CGG | + | chr3.3:1473415-1473434 | None:intergenic | 35.0% | |
| TTGGAATCAGGATTAGAGAA+AGG | - | chr3.3:1473503-1473522 | MS.gene058793:intron | 35.0% | |
| TTGTAAGGGATGTAAAAGAG+CGG | - | chr3.3:1473368-1473387 | MS.gene058793:intron | 35.0% | |
| TTGTGTTAATAGAGGATGTC+GGG | - | chr3.3:1472889-1472908 | MS.gene058793:CDS | 35.0% | |
| ! | CAATATTTTCCCAGCAGAAA+AGG | + | chr3.3:1474208-1474227 | None:intergenic | 35.0% |
| ! | CATCCTTGAGGAATTTTAGA+AGG | + | chr3.3:1472560-1472579 | None:intergenic | 35.0% |
| ! | GCGTTTATTCTAAAGGGTTA+TGG | - | chr3.3:1475376-1475395 | MS.gene058793:intron | 35.0% |
| ! | GGTTTATTTCTTGAAGAGTC+TGG | - | chr3.3:1476502-1476521 | MS.gene058793:intron | 35.0% |
| ! | TAAGAAGGATGCCAGTTTTA+TGG | - | chr3.3:1472978-1472997 | MS.gene058793:CDS | 35.0% |
| ! | TCCCTTATCCTTTTCTTTGT+CGG | + | chr3.3:1473316-1473335 | None:intergenic | 35.0% |
| ! | TTCATGTCTCAATTTTGCAG+CGG | + | chr3.3:1473784-1473803 | None:intergenic | 35.0% |
| ! | TTTCTGTGATTTTTCTCCAC+AGG | - | chr3.3:1477136-1477155 | MS.gene058793:intron | 35.0% |
| !! | ACTACAAAAGTACCTCCAAT+GGG | + | chr3.3:1474980-1474999 | None:intergenic | 35.0% |
| !! | GTTCCTTCTAAAATTCCTCA+AGG | - | chr3.3:1472554-1472573 | MS.gene058793:intron | 35.0% |
| !! | TCTCTGGTTCTTATGTAAAC+AGG | - | chr3.3:1474756-1474775 | MS.gene058793:intron | 35.0% |
| !! | TTGGAGGCGTTTATTCTAAA+GGG | - | chr3.3:1475370-1475389 | MS.gene058793:intron | 35.0% |
| !!! | ATGATTTGTTCTCCTTTTGG+AGG | - | chr3.3:1476331-1476350 | MS.gene058793:intron | 35.0% |
| AAACCAAGCAGACATGAGAA+TGG | + | chr3.3:1476487-1476506 | None:intergenic | 40.0% | |
| AAATCTCAGCAAGATGTCAC+TGG | + | chr3.3:1473971-1473990 | None:intergenic | 40.0% | |
| AACCAAGCAGACATGAGAAT+GGG | + | chr3.3:1476486-1476505 | None:intergenic | 40.0% | |
| AATCCAGAAGGAGAAACCTT+TGG | - | chr3.3:1476638-1476657 | MS.gene058793:intron | 40.0% | |
| AGAGTTCCGTCTTGGTTAAA+TGG | - | chr3.3:1473406-1473425 | MS.gene058793:intron | 40.0% | |
| AGCATGTTGTTACCAGCAAA+AGG | + | chr3.3:1476717-1476736 | None:intergenic | 40.0% | |
| AGCCTCCACAGAAAAGAAAA+TGG | - | chr3.3:1476673-1476692 | MS.gene058793:intron | 40.0% | |
| AGGGAAAATCAAAAGGAGCT+GGG | + | chr3.3:1474800-1474819 | None:intergenic | 40.0% | |
| ATCCATGGAGCAAGCTATTA+AGG | - | chr3.3:1475450-1475469 | MS.gene058793:intron | 40.0% | |
| ATGTTGGAAAAACCTGGAGA+CGG | + | chr3.3:1472443-1472462 | None:intergenic | 40.0% | |
| ATTTCTTGAAGAGTCTGGTG+AGG | - | chr3.3:1476507-1476526 | MS.gene058793:intron | 40.0% | |
| CAAGCTATTAAGGCTGAAGA+AGG | - | chr3.3:1475460-1475479 | MS.gene058793:intron | 40.0% | |
| CAGCACCATGCATATTTCAA+GGG | + | chr3.3:1475784-1475803 | None:intergenic | 40.0% | |
| CAGGTTCTGTGTTGAACTTA+TGG | - | chr3.3:1475255-1475274 | MS.gene058793:intron | 40.0% | |
| CATCACAACTCAACCAATGA+AGG | + | chr3.3:1474382-1474401 | None:intergenic | 40.0% | |
| CCTGTAGAAAAACATGTTCC+TGG | - | chr3.3:1476412-1476431 | MS.gene058793:intron | 40.0% | |
| CTACAAAAGCTTACAGGCAT+TGG | + | chr3.3:1476819-1476838 | None:intergenic | 40.0% | |
| CTCAACTGGATGTTCTTGTA+AGG | - | chr3.3:1473353-1473372 | MS.gene058793:intron | 40.0% | |
| CTCCACAGAAAAGAAAATGG+CGG | - | chr3.3:1476676-1476695 | MS.gene058793:intron | 40.0% | |
| CTCCGACAAAGAAAAGGATA+AGG | - | chr3.3:1473311-1473330 | MS.gene058793:intron | 40.0% | |
| CTTGTCCCTTGAAATATGCA+TGG | - | chr3.3:1475776-1475795 | MS.gene058793:intron | 40.0% | |
| CTTTGGACCTAATACATGAC+AGG | - | chr3.3:1473006-1473025 | MS.gene058793:intron | 40.0% | |
| GCGGCACTTCAATTTAATCA+TGG | + | chr3.3:1473765-1473784 | None:intergenic | 40.0% | |
| GGCATATTACATCATCTCTC+TGG | - | chr3.3:1474740-1474759 | MS.gene058793:intron | 40.0% | |
| GGGAAAATATTGAAGACCGT+GGG | - | chr3.3:1474216-1474235 | MS.gene058793:CDS | 40.0% | |
| GGTTACGATAGTAGGATTTC+AGG | - | chr3.3:1474623-1474642 | MS.gene058793:intron | 40.0% | |
| GTATCAGAAATCCTCTTGTC+TGG | + | chr3.3:1474046-1474065 | None:intergenic | 40.0% | |
| TAGTGCTATGTTACATTCCC+AGG | - | chr3.3:1473270-1473289 | MS.gene058793:intron | 40.0% | |
| TCATAGTCATGCTTCTGATG+AGG | + | chr3.3:1477176-1477195 | None:intergenic | 40.0% | |
| TCCACAGAAAAGAAAATGGC+GGG | - | chr3.3:1476677-1476696 | MS.gene058793:intron | 40.0% | |
| TCTATTAACACAAGTCAGCG+AGG | + | chr3.3:1472882-1472901 | None:intergenic | 40.0% | |
| TGAATTGGAGTACATCCTTG+AGG | + | chr3.3:1472572-1472591 | None:intergenic | 40.0% | |
| TGCAAGATACAACCTCCAAA+AGG | + | chr3.3:1476346-1476365 | None:intergenic | 40.0% | |
| TGGGAAAATATTGAAGACCG+TGG | - | chr3.3:1474215-1474234 | MS.gene058793:CDS | 40.0% | |
| TTAATAGAGGATGTCGGGTT+TGG | - | chr3.3:1472894-1472913 | MS.gene058793:CDS | 40.0% | |
| TTCCGTCTTGGTTAAATGGA+TGG | - | chr3.3:1473410-1473429 | MS.gene058793:intron | 40.0% | |
| ! | CCAGGAACATGTTTTTCTAC+AGG | + | chr3.3:1476415-1476434 | None:intergenic | 40.0% |
| ! | CTTCATTGGTTGAGTTGTGA+TGG | - | chr3.3:1474380-1474399 | MS.gene058793:intron | 40.0% |
| ! | GGATAATTTGTCAGCTCAAC+TGG | - | chr3.3:1473339-1473358 | MS.gene058793:intron | 40.0% |
| ! | TATGGGTTGAAATCCCGTTA+TGG | - | chr3.3:1476287-1476306 | MS.gene058793:CDS | 40.0% |
| ! | TATTTTCCCAGCAGAAAAGG+TGG | + | chr3.3:1474205-1474224 | None:intergenic | 40.0% |
| ! | TCGTTGTGTTATTCACTGCA+GGG | - | chr3.3:1476972-1476991 | MS.gene058793:intron | 40.0% |
| ! | TTCGTTGTGTTATTCACTGC+AGG | - | chr3.3:1476971-1476990 | MS.gene058793:intron | 40.0% |
| ! | TTTCTTTTCTGTGGAGGCTT+TGG | + | chr3.3:1476672-1476691 | None:intergenic | 40.0% |
| !! | AAAGCTTACAGGCATTGGAA+TGG | + | chr3.3:1476814-1476833 | None:intergenic | 40.0% |
| !! | AAGCTTACAGGCATTGGAAT+GGG | + | chr3.3:1476813-1476832 | None:intergenic | 40.0% |
| !! | ACCCGAAGTTGATAGACTTA+AGG | - | chr3.3:1474657-1474676 | MS.gene058793:CDS | 40.0% |
| !! | ATAACAGGAAGCATCCTTGT+TGG | - | chr3.3:1474923-1474942 | MS.gene058793:CDS | 40.0% |
| !! | CTTGGAGGCGTTTATTCTAA+AGG | - | chr3.3:1475369-1475388 | MS.gene058793:intron | 40.0% |
| !! | GAAAGCACCTTCTAGCAAAA+TGG | + | chr3.3:1474273-1474292 | None:intergenic | 40.0% |
| !! | GACTACAAAAGTACCTCCAA+TGG | + | chr3.3:1474981-1475000 | None:intergenic | 40.0% |
| !! | GCTTTGAAAAAGCAAGACTC+CGG | - | chr3.3:1476437-1476456 | MS.gene058793:intron | 40.0% |
| !! | TCGCTGACTTGTGTTAATAG+AGG | - | chr3.3:1472881-1472900 | MS.gene058793:CDS | 40.0% |
| !! | TGGCATTGATTGATCAATGC+AGG | - | chr3.3:1473035-1473054 | MS.gene058793:intron | 40.0% |
| !! | TTCAGTGGCTTTTTCCACTA+GGG | - | chr3.3:1477255-1477274 | MS.gene058793:CDS | 40.0% |
| !! | TTTCAGTGGCTTTTTCCACT+AGG | - | chr3.3:1477254-1477273 | MS.gene058793:CDS | 40.0% |
| !! | TTTGGAATGGGTCTTTTCAG+TGG | - | chr3.3:1473886-1473905 | MS.gene058793:intron | 40.0% |
| !!! | GGTGCAACTATTTTTTCCTG+TGG | + | chr3.3:1477155-1477174 | None:intergenic | 40.0% |
| CAGGGAAAATCAAAAGGAGC+TGG | + | chr3.3:1474801-1474820 | None:intergenic | 45.0% | |
| CAGTTTCTGCATGAGCAAAC+CGG | + | chr3.3:1476459-1476478 | None:intergenic | 45.0% | |
| CCACAGAAAAGAAAATGGCG+GGG | - | chr3.3:1476678-1476697 | MS.gene058793:intron | 45.0% | |
| CCAGCACCATGCATATTTCA+AGG | + | chr3.3:1475785-1475804 | None:intergenic | 45.0% | |
| CCTTGAAATATGCATGGTGC+TGG | - | chr3.3:1475782-1475801 | MS.gene058793:intron | 45.0% | |
| CTATGTTACATTCCCAGGCA+AGG | - | chr3.3:1473275-1473294 | MS.gene058793:intron | 45.0% | |
| CTCACCTGAGTTGCCTTTAT+AGG | + | chr3.3:1473571-1473590 | None:intergenic | 45.0% | |
| CTCGTTCTCCGACAAAGAAA+AGG | - | chr3.3:1473305-1473324 | MS.gene058793:intron | 45.0% | |
| CTGCATTAGTTGGGCGATAT+GGG | - | chr3.3:1474704-1474723 | MS.gene058793:intron | 45.0% | |
| GAGGAGTCAAGTTCGTCTTA+AGG | + | chr3.3:1475595-1475614 | None:intergenic | 45.0% | |
| GGCGGTGAGCTAATTAAACT+AGG | - | chr3.3:1473460-1473479 | MS.gene058793:intron | 45.0% | |
| GTGCAGGATAATCATTGTGC+AGG | - | chr3.3:1477075-1477094 | MS.gene058793:CDS | 45.0% | |
| TAGTGCTGTGGCATTTGGAA+TGG | - | chr3.3:1473873-1473892 | MS.gene058793:intron | 45.0% | |
| TATTCACTGCAGGGTTGTCA+TGG | - | chr3.3:1476981-1477000 | MS.gene058793:intron | 45.0% | |
| TCTGCATTAGTTGGGCGATA+TGG | - | chr3.3:1474703-1474722 | MS.gene058793:intron | 45.0% | |
| TGAAAGGAACATAGGACCCA+CGG | + | chr3.3:1474235-1474254 | None:intergenic | 45.0% | |
| TTCAGTGGCAATGGAACTCT+TGG | - | chr3.3:1473901-1473920 | MS.gene058793:intron | 45.0% | |
| ! | AGTGCTGTGGCATTTGGAAT+GGG | - | chr3.3:1473874-1473893 | MS.gene058793:intron | 45.0% |
| ! | ATGGGTCTTTTCAGTGGCAA+TGG | - | chr3.3:1473892-1473911 | MS.gene058793:intron | 45.0% |
| ! | CGAGCATGTTTTATCCCCTT+TGG | + | chr3.3:1473710-1473729 | None:intergenic | 45.0% |
| ! | GTGTAGTCTTTTCAGCCCAT+TGG | - | chr3.3:1474962-1474981 | MS.gene058793:CDS | 45.0% |
| ! | GTTTCCGAGTTTGTTTGACG+AGG | - | chr3.3:1473525-1473544 | MS.gene058793:intron | 45.0% |
| ! | GTTTTATCCCCTTTGGACCT+GGG | + | chr3.3:1473703-1473722 | None:intergenic | 45.0% |
| ! | TAGTCTTTTCAGCCCATTGG+AGG | - | chr3.3:1474965-1474984 | MS.gene058793:CDS | 45.0% |
| ! | TGTTTTATCCCCTTTGGACC+TGG | + | chr3.3:1473704-1473723 | None:intergenic | 45.0% |
| ! | TTGTCTGTCATGCCGTTTGA+TGG | - | chr3.3:1474304-1474323 | MS.gene058793:intron | 45.0% |
| !! | AGCCTTAATAGCTTGCTCCA+TGG | + | chr3.3:1475455-1475474 | None:intergenic | 45.0% |
| !! | AGCTTACAGGCATTGGAATG+GGG | + | chr3.3:1476812-1476831 | None:intergenic | 45.0% |
| !! | CGCCATTTTCTTTTCTGTGG+AGG | + | chr3.3:1476678-1476697 | None:intergenic | 45.0% |
| !! | TGGCTTTTTCCACTAGGGAA+AGG | - | chr3.3:1477260-1477279 | MS.gene058793:CDS | 45.0% |
| !! | TTGTTGGTTTCCCAGACAAG+AGG | - | chr3.3:1474032-1474051 | MS.gene058793:intron | 45.0% |
| !!! | CTTGCTTTTTCAAAGCTGCC+AGG | + | chr3.3:1476433-1476452 | None:intergenic | 45.0% |
| !!! | AATTTTATAAATTTCAATTT+TGG | - | chr3.3:1476553-1476572 | MS.gene058793:intron | 5.0% |
| CCTTGGCAAGGAAGGCTTAA+AGG | - | chr3.3:1473439-1473458 | MS.gene058793:intron | 50.0% | |
| CCTTTAAGCCTTCCTTGCCA+AGG | + | chr3.3:1473442-1473461 | None:intergenic | 50.0% | |
| CTAACCGCTTCTTGGCCAAA+CGG | - | chr3.3:1473230-1473249 | MS.gene058793:intron | 50.0% | |
| CTGACGCAGGACAACTATAC+AGG | + | chr3.3:1476743-1476762 | None:intergenic | 50.0% | |
| CTGTATAGTTGTCCTGCGTC+AGG | - | chr3.3:1476741-1476760 | MS.gene058793:intron | 50.0% | |
| GCTCCAAAGGTTTCTCCTTC+TGG | + | chr3.3:1476644-1476663 | None:intergenic | 50.0% | |
| GGAAATCTCCTTGGCAAGGA+AGG | - | chr3.3:1473431-1473450 | MS.gene058793:intron | 50.0% | |
| GGATGGAAATCTCCTTGGCA+AGG | - | chr3.3:1473427-1473446 | MS.gene058793:intron | 50.0% | |
| GGCAATGGAACTCTTGGAAC+TGG | - | chr3.3:1473907-1473926 | MS.gene058793:intron | 50.0% | |
| GTCCCATTCTCATGTCTGCT+TGG | - | chr3.3:1476481-1476500 | MS.gene058793:intron | 50.0% | |
| TCAGCTAGTGCTGTGGCATT+TGG | - | chr3.3:1473868-1473887 | MS.gene058793:intron | 50.0% | |
| TCTTCCGTTTGGCCAAGAAG+CGG | + | chr3.3:1473237-1473256 | None:intergenic | 50.0% | |
| TGGAATATCATGCTCCGCGA+GGG | + | chr3.3:1477230-1477249 | None:intergenic | 50.0% | |
| TGGCAAGGAAGGCTTAAAGG+CGG | - | chr3.3:1473442-1473461 | MS.gene058793:intron | 50.0% | |
| TTACATTCCCAGGCAAGGCA+TGG | - | chr3.3:1473280-1473299 | MS.gene058793:intron | 50.0% | |
| TTGGAAAAACCTGGAGACGG+TGG | + | chr3.3:1472440-1472459 | None:intergenic | 50.0% | |
| TTGGAATATCATGCTCCGCG+AGG | + | chr3.3:1477231-1477250 | None:intergenic | 50.0% | |
| TTTGAGGAGTCGGGAAACAC+TGG | - | chr3.3:1473675-1473694 | MS.gene058793:intron | 50.0% | |
| TTTGGCCAAGAAGCGGTTAG+TGG | + | chr3.3:1473230-1473249 | None:intergenic | 50.0% | |
| ! | AGAGGATGTCGGGTTTGGTA+AGG | - | chr3.3:1472899-1472918 | MS.gene058793:CDS | 50.0% |
| ! | CACATGCCACCTTTTCTGCT+GGG | - | chr3.3:1474196-1474215 | MS.gene058793:CDS | 50.0% |
| ! | CTTTGGAGAGAGTTCCGTCT+TGG | - | chr3.3:1473398-1473417 | MS.gene058793:intron | 50.0% |
| ! | GATGTCGGGTTTGGTAAGGA+GGG | - | chr3.3:1472903-1472922 | MS.gene058793:CDS | 50.0% |
| !! | CCCCGCCATTTTCTTTTCTG+TGG | + | chr3.3:1476681-1476700 | None:intergenic | 50.0% |
| !! | CTTTTCTGTGGAGGCTTTGG+AGG | + | chr3.3:1476669-1476688 | None:intergenic | 50.0% |
| !!! | CTTTTAGCTTTGCCTGACGC+AGG | + | chr3.3:1476756-1476775 | None:intergenic | 50.0% |
| AACATCTCTCCACCGTCTCC+AGG | - | chr3.3:1472428-1472447 | MS.gene058793:CDS | 55.0% | |
| AACGAGTTCCATGCCTTGCC+TGG | + | chr3.3:1473291-1473310 | None:intergenic | 55.0% | |
| ACAGCACTAGCTGATGCTCG+GGG | + | chr3.3:1473862-1473881 | None:intergenic | 55.0% | |
| ACGAGTTCCATGCCTTGCCT+GGG | + | chr3.3:1473290-1473309 | None:intergenic | 55.0% | |
| CACAGCACTAGCTGATGCTC+GGG | + | chr3.3:1473863-1473882 | None:intergenic | 55.0% | |
| CCACAGCACTAGCTGATGCT+CGG | + | chr3.3:1473864-1473883 | None:intergenic | 55.0% | |
| CCAGCAGAAAAGGTGGCATG+TGG | + | chr3.3:1474198-1474217 | None:intergenic | 55.0% | |
| GCTGGAGTGGACAGATGACT+TGG | - | chr3.3:1475351-1475370 | MS.gene058793:intron | 55.0% | |
| GGGTTGTCACCTTTCCCTAG+TGG | + | chr3.3:1477272-1477291 | None:intergenic | 55.0% | |
| GGTGGCATGTGGAGATTGTG+TGG | + | chr3.3:1474187-1474206 | None:intergenic | 55.0% | |
| ! | AAAATGGCGGGGTAGCAGTG+TGG | - | chr3.3:1476689-1476708 | MS.gene058793:intron | 55.0% |
| ! | ACTGGTTCCCAGGTCCAAAG+GGG | - | chr3.3:1473693-1473712 | MS.gene058793:intron | 55.0% |
| ! | AGCAGTGTGGCTCCTTTTGC+TGG | - | chr3.3:1476702-1476721 | MS.gene058793:intron | 55.0% |
| ! | CCACATGCCACCTTTTCTGC+TGG | - | chr3.3:1474195-1474214 | MS.gene058793:CDS | 55.0% |
| ! | GGAGTGGACAGATGACTTGG+AGG | - | chr3.3:1475354-1475373 | MS.gene058793:intron | 55.0% |
| ! | GGATGTCGGGTTTGGTAAGG+AGG | - | chr3.3:1472902-1472921 | MS.gene058793:CDS | 55.0% |
| !! | ACACTGGTTCCCAGGTCCAA+AGG | - | chr3.3:1473691-1473710 | MS.gene058793:intron | 55.0% |
| !! | CACTGGTTCCCAGGTCCAAA+GGG | - | chr3.3:1473692-1473711 | MS.gene058793:intron | 55.0% |
| !! | GGCTTTGGAGGTAGCTCCAA+AGG | + | chr3.3:1476657-1476676 | None:intergenic | 55.0% |
| ATCATGCTCCGCGAGGGCTT+CGG | + | chr3.3:1477224-1477243 | None:intergenic | 60.0% | |
| CCGAGCATCAGCTAGTGCTG+TGG | - | chr3.3:1473861-1473880 | MS.gene058793:intron | 60.0% | |
| !! | GTCGGGAAACACTGGTTCCC+AGG | - | chr3.3:1473683-1473702 | MS.gene058793:intron | 60.0% |
| AGCAAGAGCCGAAGCCCTCG+CGG | - | chr3.3:1477213-1477232 | MS.gene058793:CDS | 65.0% | |
| GGGCGCCACTAACCGCTTCT+TGG | - | chr3.3:1473222-1473241 | MS.gene058793:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 1472331 | 1477307 | 1472331 | ID=MS.gene058793 |
| chr3.3 | mRNA | 1472331 | 1477307 | 1472331 | ID=MS.gene058793.t1;Parent=MS.gene058793 |
| chr3.3 | exon | 1477189 | 1477307 | 1477189 | ID=MS.gene058793.t1.exon1;Parent=MS.gene058793.t1 |
| chr3.3 | CDS | 1477189 | 1477307 | 1477189 | ID=cds.MS.gene058793.t1;Parent=MS.gene058793.t1 |
| chr3.3 | exon | 1477034 | 1477121 | 1477034 | ID=MS.gene058793.t1.exon2;Parent=MS.gene058793.t1 |
| chr3.3 | CDS | 1477034 | 1477121 | 1477034 | ID=cds.MS.gene058793.t1;Parent=MS.gene058793.t1 |
| chr3.3 | exon | 1476053 | 1476346 | 1476053 | ID=MS.gene058793.t1.exon3;Parent=MS.gene058793.t1 |
| chr3.3 | CDS | 1476053 | 1476346 | 1476053 | ID=cds.MS.gene058793.t1;Parent=MS.gene058793.t1 |
| chr3.3 | exon | 1475624 | 1475782 | 1475624 | ID=MS.gene058793.t1.exon4;Parent=MS.gene058793.t1 |
| chr3.3 | CDS | 1475624 | 1475782 | 1475624 | ID=cds.MS.gene058793.t1;Parent=MS.gene058793.t1 |
| chr3.3 | exon | 1474861 | 1475001 | 1474861 | ID=MS.gene058793.t1.exon5;Parent=MS.gene058793.t1 |
| chr3.3 | CDS | 1474861 | 1475001 | 1474861 | ID=cds.MS.gene058793.t1;Parent=MS.gene058793.t1 |
| chr3.3 | exon | 1474652 | 1474708 | 1474652 | ID=MS.gene058793.t1.exon6;Parent=MS.gene058793.t1 |
| chr3.3 | CDS | 1474652 | 1474708 | 1474652 | ID=cds.MS.gene058793.t1;Parent=MS.gene058793.t1 |
| chr3.3 | exon | 1474157 | 1474295 | 1474157 | ID=MS.gene058793.t1.exon7;Parent=MS.gene058793.t1 |
| chr3.3 | CDS | 1474157 | 1474295 | 1474157 | ID=cds.MS.gene058793.t1;Parent=MS.gene058793.t1 |
| chr3.3 | exon | 1473115 | 1473219 | 1473115 | ID=MS.gene058793.t1.exon8;Parent=MS.gene058793.t1 |
| chr3.3 | CDS | 1473115 | 1473219 | 1473115 | ID=cds.MS.gene058793.t1;Parent=MS.gene058793.t1 |
| chr3.3 | exon | 1472814 | 1473010 | 1472814 | ID=MS.gene058793.t1.exon9;Parent=MS.gene058793.t1 |
| chr3.3 | CDS | 1472814 | 1473010 | 1472814 | ID=cds.MS.gene058793.t1;Parent=MS.gene058793.t1 |
| chr3.3 | exon | 1472604 | 1472645 | 1472604 | ID=MS.gene058793.t1.exon10;Parent=MS.gene058793.t1 |
| chr3.3 | CDS | 1472604 | 1472645 | 1472604 | ID=cds.MS.gene058793.t1;Parent=MS.gene058793.t1 |
| chr3.3 | exon | 1472331 | 1472480 | 1472331 | ID=MS.gene058793.t1.exon11;Parent=MS.gene058793.t1 |
| chr3.3 | CDS | 1472331 | 1472480 | 1472331 | ID=cds.MS.gene058793.t1;Parent=MS.gene058793.t1 |
| Gene Sequence |
| Protein sequence |
