Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52851.t1 | AES71222.2 | 95.9 | 441 | 18 | 0 | 33 | 473 | 38 | 478 | 1.40E-250 | 875.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52851.t1 | Q54ND5 | 24.5 | 457 | 277 | 9 | 51 | 458 | 102 | 539 | 1.9e-33 | 145.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52851.t1 | A0A072UZE6 | 95.9 | 441 | 18 | 0 | 33 | 473 | 38 | 478 | 1.0e-250 | 875.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene52851 | 0.82337 | 1.44E-53 | -1.69E-46 |
| MS.gene049501 | MS.gene52851 | 0.830084 | 3.58E-55 | -1.69E-46 |
| MS.gene050156 | MS.gene52851 | 0.829623 | 4.64E-55 | -1.69E-46 |
| MS.gene050226 | MS.gene52851 | 0.814523 | 1.48E-51 | -1.69E-46 |
| MS.gene050227 | MS.gene52851 | 0.837827 | 4.13E-57 | -1.69E-46 |
| MS.gene050228 | MS.gene52851 | 0.82565 | 4.18E-54 | -1.69E-46 |
| MS.gene050438 | MS.gene52851 | 0.808632 | 2.82E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene52851 | 0.834829 | 2.39E-56 | -1.69E-46 |
| MS.gene050558 | MS.gene52851 | 0.807342 | 5.30E-50 | -1.69E-46 |
| MS.gene050719 | MS.gene52851 | 0.845269 | 4.51E-59 | -1.69E-46 |
| MS.gene050721 | MS.gene52851 | 0.841743 | 3.95E-58 | -1.69E-46 |
| MS.gene050724 | MS.gene52851 | 0.841033 | 6.07E-58 | -1.69E-46 |
| MS.gene050787 | MS.gene52851 | 0.851513 | 8.45E-61 | -1.69E-46 |
| MS.gene050844 | MS.gene52851 | 0.816087 | 6.63E-52 | -1.69E-46 |
| MS.gene050959 | MS.gene52851 | 0.800027 | 1.75E-48 | -1.69E-46 |
| MS.gene051860 | MS.gene52851 | 0.848784 | 4.92E-60 | -1.69E-46 |
| MS.gene052042 | MS.gene52851 | 0.810244 | 1.27E-50 | -1.69E-46 |
| MS.gene052611 | MS.gene52851 | 0.803166 | 3.97E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene52851 | 0.819726 | 9.98E-53 | -1.69E-46 |
| MS.gene052896 | MS.gene52851 | 0.844293 | 8.27E-59 | -1.69E-46 |
| MS.gene053221 | MS.gene52851 | 0.804071 | 2.58E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene52851 | 0.808948 | 2.41E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene52851 | 0.834221 | 3.40E-56 | -1.69E-46 |
| MS.gene054468 | MS.gene52851 | 0.828399 | 9.19E-55 | -1.69E-46 |
| MS.gene054472 | MS.gene52851 | 0.823548 | 1.31E-53 | -1.69E-46 |
| MS.gene054473 | MS.gene52851 | 0.802959 | 4.38E-49 | -1.69E-46 |
| MS.gene05468 | MS.gene52851 | 0.807691 | 4.47E-50 | -1.69E-46 |
| MS.gene055356 | MS.gene52851 | 0.807245 | 5.55E-50 | -1.69E-46 |
| MS.gene055357 | MS.gene52851 | 0.80563 | 1.22E-49 | -1.69E-46 |
| MS.gene055363 | MS.gene52851 | 0.820953 | 5.22E-53 | -1.69E-46 |
| MS.gene055818 | MS.gene52851 | 0.820799 | 5.67E-53 | -1.69E-46 |
| MS.gene05604 | MS.gene52851 | 0.805757 | 1.14E-49 | -1.69E-46 |
| MS.gene056173 | MS.gene52851 | 0.80427 | 2.34E-49 | -1.69E-46 |
| MS.gene056875 | MS.gene52851 | 0.801573 | 8.45E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene52851 | 0.832419 | 9.55E-56 | -1.69E-46 |
| MS.gene057469 | MS.gene52851 | 0.804628 | 1.97E-49 | -1.69E-46 |
| MS.gene058139 | MS.gene52851 | 0.806864 | 6.69E-50 | -1.69E-46 |
| MS.gene058168 | MS.gene52851 | 0.80968 | 1.68E-50 | -1.69E-46 |
| MS.gene058636 | MS.gene52851 | 0.820492 | 6.66E-53 | -1.69E-46 |
| MS.gene058792 | MS.gene52851 | 0.968763 | 3.85E-129 | -1.69E-46 |
| MS.gene058793 | MS.gene52851 | 0.930043 | 2.90E-93 | -1.69E-46 |
| MS.gene059249 | MS.gene52851 | 0.811026 | 8.60E-51 | -1.69E-46 |
| MS.gene059789 | MS.gene52851 | 0.805102 | 1.57E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene52851 | 0.81806 | 2.39E-52 | -1.69E-46 |
| MS.gene060572 | MS.gene52851 | 0.836182 | 1.09E-56 | -1.69E-46 |
| MS.gene060683 | MS.gene52851 | 0.812544 | 4.02E-51 | -1.69E-46 |
| MS.gene060685 | MS.gene52851 | 0.810711 | 1.01E-50 | -1.69E-46 |
| MS.gene060781 | MS.gene52851 | 0.827324 | 1.67E-54 | -1.69E-46 |
| MS.gene060803 | MS.gene52851 | 0.810948 | 8.94E-51 | -1.69E-46 |
| MS.gene061040 | MS.gene52851 | -0.809871 | 1.53E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52851.t1 | MTR_3g071580 | 95.485 | 443 | 20 | 0 | 31 | 473 | 36 | 478 | 0.0 | 852 |
| MS.gene52851.t1 | MTR_3g071580 | 95.485 | 443 | 20 | 0 | 31 | 473 | 36 | 478 | 0.0 | 850 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52851.t1 | AT1G09870 | 66.071 | 448 | 145 | 2 | 28 | 470 | 29 | 474 | 0.0 | 635 |
Find 110 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTCCATTTGAAGTATTTA+AGG | 0.128114 | 3.3:-1506109 | MS.gene52851:intron |
| GCTCCAAAGGTTTCTCCTTC+TGG | 0.189619 | 3.3:+1506481 | None:intergenic |
| TCTGCATTAGTTGGGCGATA+TGG | 0.221007 | 3.3:-1508419 | MS.gene52851:CDS |
| GGAAAAGCCACTGAAATATT+TGG | 0.234303 | 3.3:+1505875 | None:intergenic |
| CCTTGGCAAGGAAGGCTTAA+AGG | 0.244002 | 3.3:-1509683 | MS.gene52851:CDS |
| AGAGTTCCGTCTTGGTTAAA+TGG | 0.267555 | 3.3:-1509716 | MS.gene52851:CDS |
| ACCACAAGGTTTAAATGAAT+TGG | 0.278023 | 3.3:+1510538 | None:intergenic |
| CTCACCTGAGTTGCCTTTAT+AGG | 0.288772 | 3.3:+1509554 | None:intergenic |
| GGTTACGATAGTAGGATTTC+AGG | 0.291373 | 3.3:-1508499 | MS.gene52851:intron |
| ATCCATGGAGCAAGCTATTA+AGG | 0.308600 | 3.3:-1507672 | MS.gene52851:CDS |
| TCCTTAAGTCTATCAACTTC+GGG | 0.308723 | 3.3:+1508464 | None:intergenic |
| AAAAGAGCGGAAATTGTCTT+TGG | 0.330350 | 3.3:-1509741 | MS.gene52851:CDS |
| GGATAATTTGTCAGCTCAAC+TGG | 0.331316 | 3.3:-1509783 | MS.gene52851:CDS |
| TCAGCTAGTGCTGTGGCATT+TGG | 0.337150 | 3.3:-1509254 | MS.gene52851:CDS |
| TAGACTTAAGGAACCTATCT+TGG | 0.351543 | 3.3:-1508453 | MS.gene52851:CDS |
| GCGTTTATTCTAAAGGGTTA+TGG | 0.369605 | 3.3:-1507746 | MS.gene52851:CDS |
| CTGCATTAGTTGGGCGATAT+GGG | 0.371019 | 3.3:-1508418 | MS.gene52851:CDS |
| GGTTTATTTCTTGAAGAGTC+TGG | 0.374217 | 3.3:-1506620 | MS.gene52851:intron |
| AGCCTCCACAGAAAAGAAAA+TGG | 0.377131 | 3.3:-1506449 | MS.gene52851:CDS |
| GTGTATATAGATTACATTGC+TGG | 0.383792 | 3.3:-1507789 | MS.gene52851:intron |
| AATTATACGAACTTGGAATC+AGG | 0.387815 | 3.3:-1509631 | MS.gene52851:CDS |
| TTCAGTGGCAATGGAACTCT+TGG | 0.391689 | 3.3:-1509221 | MS.gene52851:CDS |
| TCCAGACATATATCCTATAA+AGG | 0.391852 | 3.3:-1509567 | MS.gene52851:CDS |
| GAGATTACATCTGCATTAGT+TGG | 0.394671 | 3.3:-1508428 | MS.gene52851:CDS |
| AAATCACTAAATTATAGAAT+GGG | 0.395225 | 3.3:-1507722 | MS.gene52851:CDS |
| GACACCTTAAATACTTCAAA+TGG | 0.399416 | 3.3:+1506105 | None:intergenic |
| GTCCCATTCTCATGTCTGCT+TGG | 0.401122 | 3.3:-1506641 | MS.gene52851:CDS |
| AAGCTTACAGGCATTGGAAT+GGG | 0.405845 | 3.3:+1506312 | None:intergenic |
| TTGGAGGCGTTTATTCTAAA+GGG | 0.408639 | 3.3:-1507752 | MS.gene52851:CDS |
| CTTGGAGGCGTTTATTCTAA+AGG | 0.419192 | 3.3:-1507753 | MS.gene52851:CDS |
| AACATCTCTCCACCGTCTCC+AGG | 0.430519 | 3.3:-1510694 | MS.gene52851:CDS |
| TCTCTGGTTCTTATGTAAAC+AGG | 0.431034 | 3.3:-1508366 | MS.gene52851:intron |
| TTCCTTAAGTCTATCAACTT+CGG | 0.436190 | 3.3:+1508463 | None:intergenic |
| CTGTATAGTTGTCCTGCGTC+AGG | 0.438844 | 3.3:-1506381 | MS.gene52851:CDS |
| CTCAACTGGATGTTCTTGTA+AGG | 0.439096 | 3.3:-1509769 | MS.gene52851:CDS |
| GGCAATGGAACTCTTGGAAC+TGG | 0.447948 | 3.3:-1509215 | MS.gene52851:CDS |
| TAAATCACTAAATTATAGAA+TGG | 0.454360 | 3.3:-1507723 | MS.gene52851:CDS |
| CACAGCACTAGCTGATGCTC+GGG | 0.455439 | 3.3:+1509262 | None:intergenic |
| CTACAAAAGCTTACAGGCAT+TGG | 0.460567 | 3.3:+1506306 | None:intergenic |
| GGAAATCTCCTTGGCAAGGA+AGG | 0.464112 | 3.3:-1509691 | MS.gene52851:CDS |
| CTGACGCAGGACAACTATAC+AGG | 0.473699 | 3.3:+1506382 | None:intergenic |
| CTCCGACAAAGAAAAGGATA+AGG | 0.475675 | 3.3:-1509811 | MS.gene52851:CDS |
| AATCCAGAAGGAGAAACCTT+TGG | 0.476956 | 3.3:-1506484 | MS.gene52851:CDS |
| ATCATGCTCCGCGAGGGCTT+CGG | 0.477499 | 3.3:+1505901 | None:intergenic |
| ACCCGAAGTTGATAGACTTA+AGG | 0.479122 | 3.3:-1508465 | MS.gene52851:CDS |
| TTCCGTCTTGGTTAAATGGA+TGG | 0.483104 | 3.3:-1509712 | MS.gene52851:CDS |
| ATAACAGGAAGCATCCTTGT+TGG | 0.485453 | 3.3:-1508199 | MS.gene52851:intron |
| TTGGAATCAGGATTAGAGAA+AGG | 0.488890 | 3.3:-1509619 | MS.gene52851:CDS |
| TAGTGCTGTGGCATTTGGAA+TGG | 0.489961 | 3.3:-1509249 | MS.gene52851:CDS |
| GGCTTTGGAGGTAGCTCCAA+AGG | 0.490471 | 3.3:+1506468 | None:intergenic |
| AGTGCTGTGGCATTTGGAAT+GGG | 0.491271 | 3.3:-1509248 | MS.gene52851:CDS |
| CTCGTTCTCCGACAAAGAAA+AGG | 0.491299 | 3.3:-1509817 | MS.gene52851:CDS |
| CTTTGGAGAGAGTTCCGTCT+TGG | 0.491832 | 3.3:-1509724 | MS.gene52851:CDS |
| AAAGAAAAGGATAAGGGAGT+TGG | 0.492650 | 3.3:-1509804 | MS.gene52851:CDS |
| TATTCACTGCAGGGTTGTCA+TGG | 0.494935 | 3.3:-1506141 | MS.gene52851:intron |
| AGATTACATCTGCATTAGTT+GGG | 0.499233 | 3.3:-1508427 | MS.gene52851:CDS |
| TCCACAGAAAAGAAAATGGC+GGG | 0.499586 | 3.3:-1506445 | MS.gene52851:CDS |
| TCCAATTCATTTAAACCTTG+TGG | 0.499872 | 3.3:-1510539 | MS.gene52851:intron |
| GCCTTTATAGGATATATGTC+TGG | 0.504217 | 3.3:+1509566 | None:intergenic |
| AACCAAGCAGACATGAGAAT+GGG | 0.505960 | 3.3:+1506639 | None:intergenic |
| CAGTTTCTGCATGAGCAAAC+CGG | 0.507648 | 3.3:+1506666 | None:intergenic |
| GGCATATTACATCATCTCTC+TGG | 0.508982 | 3.3:-1508382 | MS.gene52851:CDS |
| TGAAGATGTTGTTCAATCCA+TGG | 0.509427 | 3.3:-1507687 | MS.gene52851:CDS |
| AGCATGTTGTTACCAGCAAA+AGG | 0.511702 | 3.3:+1506408 | None:intergenic |
| GATGTAATCTCATCCAAGAT+AGG | 0.518769 | 3.3:+1508440 | None:intergenic |
| AAACCAAGCAGACATGAGAA+TGG | 0.520129 | 3.3:+1506638 | None:intergenic |
| CCACAGCACTAGCTGATGCT+CGG | 0.526889 | 3.3:+1509261 | None:intergenic |
| GAGGAAGAATTATACGAACT+TGG | 0.526932 | 3.3:-1509638 | MS.gene52851:CDS |
| TGGAATATCATGCTCCGCGA+GGG | 0.537062 | 3.3:+1505895 | None:intergenic |
| GCAAAATTGTGATAGAATGT+TGG | 0.539085 | 3.3:+1510666 | None:intergenic |
| CAAGCTATTAAGGCTGAAGA+AGG | 0.544813 | 3.3:-1507662 | MS.gene52851:intron |
| TTCCATCCATTTAACCAAGA+CGG | 0.547637 | 3.3:+1509710 | None:intergenic |
| CCTTTAAGCCTTCCTTGCCA+AGG | 0.550309 | 3.3:+1509683 | None:intergenic |
| TGAACAACATCTTCAAGTAA+TGG | 0.551000 | 3.3:+1507695 | None:intergenic |
| AAATCTCAGCAAGATGTCAC+TGG | 0.554670 | 3.3:+1509154 | None:intergenic |
| TAAATGGATGGAAATCTCCT+TGG | 0.554988 | 3.3:-1509700 | MS.gene52851:CDS |
| ACTACAAAAGTACCTCCAAT+GGG | 0.557015 | 3.3:+1508145 | None:intergenic |
| AAAGCTTACAGGCATTGGAA+TGG | 0.558496 | 3.3:+1506311 | None:intergenic |
| TCCGACAAAGAAAAGGATAA+GGG | 0.559478 | 3.3:-1509810 | MS.gene52851:CDS |
| AGCCTTAATAGCTTGCTCCA+TGG | 0.564475 | 3.3:+1507670 | None:intergenic |
| ATATCCTATAAAGGCAACTC+AGG | 0.566710 | 3.3:-1509558 | MS.gene52851:intron |
| GACTACAAAAGTACCTCCAA+TGG | 0.570542 | 3.3:+1508144 | None:intergenic |
| GTTCCTTCTAAAATTCCTCA+AGG | 0.574019 | 3.3:-1510568 | MS.gene52851:CDS |
| TTACATTCCCAGGCAAGGCA+TGG | 0.576004 | 3.3:-1509842 | MS.gene52851:intron |
| TATAGATTACATTGCTGGAG+TGG | 0.578859 | 3.3:-1507784 | MS.gene52851:intron |
| GCTGGAGTGGACAGATGACT+TGG | 0.580590 | 3.3:-1507771 | MS.gene52851:CDS |
| TTATAGGATATATGTCTGGA+TGG | 0.582429 | 3.3:+1509570 | None:intergenic |
| TGATTGTTGTCATAACTACA+AGG | 0.582799 | 3.3:-1509129 | MS.gene52851:intron |
| GGCGGTGAGCTAATTAAACT+AGG | 0.601575 | 3.3:-1509662 | MS.gene52851:CDS |
| TCAACTGGATGTTCTTGTAA+GGG | 0.604338 | 3.3:-1509768 | MS.gene52851:CDS |
| GGATGGAAATCTCCTTGGCA+AGG | 0.610408 | 3.3:-1509695 | MS.gene52851:CDS |
| AATCACTAAATTATAGAATG+GGG | 0.619098 | 3.3:-1507721 | MS.gene52851:CDS |
| AGCAAGAGCCGAAGCCCTCG+CGG | 0.619488 | 3.3:-1505909 | MS.gene52851:CDS |
| GGAGTGGACAGATGACTTGG+AGG | 0.620597 | 3.3:-1507768 | MS.gene52851:CDS |
| AGCTTACAGGCATTGGAATG+GGG | 0.624158 | 3.3:+1506313 | None:intergenic |
| AGAGTTTGACAAAATCCAGA+AGG | 0.633058 | 3.3:-1506496 | MS.gene52851:CDS |
| CCGAGCATCAGCTAGTGCTG+TGG | 0.634420 | 3.3:-1509261 | MS.gene52851:CDS |
| TAATCCTCGTCAAACAAACT+CGG | 0.636648 | 3.3:+1509593 | None:intergenic |
| CTCCACAGAAAAGAAAATGG+CGG | 0.637496 | 3.3:-1506446 | MS.gene52851:CDS |
| TGAGCTAATTAAACTAGGAG+AGG | 0.639606 | 3.3:-1509657 | MS.gene52851:CDS |
| ACAGCACTAGCTGATGCTCG+GGG | 0.659608 | 3.3:+1509263 | None:intergenic |
| GTTTCCGAGTTTGTTTGACG+AGG | 0.659643 | 3.3:-1509597 | MS.gene52851:CDS |
| TGAATTGGAGTACATCCTTG+AGG | 0.660520 | 3.3:+1510553 | None:intergenic |
| TTGGAATATCATGCTCCGCG+AGG | 0.669168 | 3.3:+1505894 | None:intergenic |
| CCACAGAAAAGAAAATGGCG+GGG | 0.671932 | 3.3:-1506444 | MS.gene52851:CDS |
| TCATAGTCATGCTTCTGATG+AGG | 0.679963 | 3.3:+1505949 | None:intergenic |
| TTGTAAGGGATGTAAAAGAG+CGG | 0.687987 | 3.3:-1509754 | MS.gene52851:CDS |
| AAAATGGCGGGGTAGCAGTG+TGG | 0.701485 | 3.3:-1506433 | MS.gene52851:CDS |
| TTGATCAGTTATATCCAACA+AGG | 0.711218 | 3.3:+1508185 | None:intergenic |
| TGGCAAGGAAGGCTTAAAGG+CGG | 0.730530 | 3.3:-1509680 | MS.gene52851:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATATAACCATAAAAA+AGG | + | chr3.3:1508066-1508085 | None:intergenic | 10.0% |
| !! | AATAAAATTTAAAAAATGTC+AGG | - | chr3.3:1508521-1508540 | MS.gene52851:intron | 10.0% |
| !! | TAATTAATTATGAAATATGT+TGG | - | chr3.3:1506112-1506131 | MS.gene52851:CDS | 10.0% |
| !! | TATTTAAATAATATTTACAG+AGG | + | chr3.3:1508505-1508524 | None:intergenic | 10.0% |
| !! | AAAGAAACTAAATTAGTAAA+AGG | - | chr3.3:1508614-1508633 | MS.gene52851:intron | 15.0% |
| !! | AAAGAAGATTAAAATCAATA+TGG | + | chr3.3:1509468-1509487 | None:intergenic | 15.0% |
| !! | AAATCACTAAATTATAGAAT+GGG | - | chr3.3:1508867-1508886 | MS.gene52851:intron | 15.0% |
| !! | AACATACATAAAATATAAGT+GGG | + | chr3.3:1506582-1506601 | None:intergenic | 15.0% |
| !! | AAGAAACTAAATTAGTAAAA+GGG | - | chr3.3:1508615-1508634 | MS.gene52851:intron | 15.0% |
| !! | GCAAATATGTATATAAATAT+AGG | + | chr3.3:1508995-1509014 | None:intergenic | 15.0% |
| !! | TAAATCACTAAATTATAGAA+TGG | - | chr3.3:1508866-1508885 | MS.gene52851:intron | 15.0% |
| !! | TAATCTATATACACATAATT+TGG | + | chr3.3:1508794-1508813 | None:intergenic | 15.0% |
| !! | TTATGGTTATATAATTTCTT+TGG | - | chr3.3:1508069-1508088 | MS.gene52851:intron | 15.0% |
| !!! | ATGTTGGTTATATATATAAT+AGG | - | chr3.3:1506128-1506147 | MS.gene52851:CDS | 15.0% |
| !!! | TATTGATAGTTTAAACTATT+GGG | - | chr3.3:1506669-1506688 | MS.gene52851:CDS | 15.0% |
| !!! | TATTTTATTTGTATTCCTTT+TGG | - | chr3.3:1509533-1509552 | MS.gene52851:intron | 15.0% |
| !!! | TTATTGATAGTTTAAACTAT+TGG | - | chr3.3:1506668-1506687 | MS.gene52851:CDS | 15.0% |
| !!! | TTCTCATTGTTTTAATTTAA+TGG | - | chr3.3:1509686-1509705 | MS.gene52851:CDS | 15.0% |
| !!! | TTTAGCATTTTTTAATATTG+AGG | - | chr3.3:1508953-1508972 | MS.gene52851:intron | 15.0% |
| !! | AACAATAACTTATATGCATT+TGG | + | chr3.3:1508658-1508677 | None:intergenic | 20.0% |
| !! | AACTATCAATAATAACAAGT+TGG | + | chr3.3:1506660-1506679 | None:intergenic | 20.0% |
| !! | AATCACTAAATTATAGAATG+GGG | - | chr3.3:1508868-1508887 | MS.gene52851:intron | 20.0% |
| !! | AATTCCAGTTAGTATATAAT+TGG | - | chr3.3:1509662-1509681 | MS.gene52851:CDS | 20.0% |
| !! | AATTTGTGATGATTTATAAC+AGG | - | chr3.3:1508375-1508394 | MS.gene52851:CDS | 20.0% |
| !! | AGAAACTAAATTAGTAAAAG+GGG | - | chr3.3:1508616-1508635 | MS.gene52851:intron | 20.0% |
| !! | ATATAATCATTTCAAAGTGT+TGG | + | chr3.3:1506222-1506241 | None:intergenic | 20.0% |
| !! | CAACATACATAAAATATAAG+TGG | + | chr3.3:1506583-1506602 | None:intergenic | 20.0% |
| !! | GAATAAAATTTATCACTGAA+AGG | + | chr3.3:1507718-1507737 | None:intergenic | 20.0% |
| !! | GACACTAATATTTATGAAAT+TGG | + | chr3.3:1507583-1507602 | None:intergenic | 20.0% |
| !! | GTAATATTAATTCTCCATAA+CGG | + | chr3.3:1509771-1509790 | None:intergenic | 20.0% |
| !! | TAAGTTTCAGAAATATCAAA+CGG | + | chr3.3:1507278-1507297 | None:intergenic | 20.0% |
| !! | TAATATTAATTCTCCATAAC+GGG | + | chr3.3:1509770-1509789 | None:intergenic | 20.0% |
| !! | TGTTATAAATCATCACAAAT+TGG | + | chr3.3:1508376-1508395 | None:intergenic | 20.0% |
| !! | TTTCATGCTTTATAAGAAAA+TGG | - | chr3.3:1509441-1509460 | MS.gene52851:intron | 20.0% |
| !!! | AACTATGCATTTTTTAATAG+CGG | - | chr3.3:1509576-1509595 | MS.gene52851:CDS | 20.0% |
| !!! | TATATTTTATGTATGTTGCT+TGG | - | chr3.3:1506585-1506604 | MS.gene52851:intron | 20.0% |
| !!! | TTAAGAAGCATATTTACAAA+TGG | + | chr3.3:1507605-1507624 | None:intergenic | 20.0% |
| ! | AATATGAAGTGTGTTTAAAG+AGG | - | chr3.3:1507934-1507953 | MS.gene52851:intron | 25.0% |
| ! | ACAACCTTTATTGATGTTTA+TGG | - | chr3.3:1509736-1509755 | MS.gene52851:CDS | 25.0% |
| ! | ATAAAAACCTGTCATGTATT+AGG | + | chr3.3:1506483-1506502 | None:intergenic | 25.0% |
| ! | CAACCTTTATTGATGTTTAT+GGG | - | chr3.3:1509737-1509756 | MS.gene52851:CDS | 25.0% |
| ! | CATTACATTAGTGACAAATA+TGG | + | chr3.3:1507823-1507842 | None:intergenic | 25.0% |
| ! | TAAAAGAAGAAAAGAACACA+GGG | + | chr3.3:1508286-1508305 | None:intergenic | 25.0% |
| ! | TACATCTATGTTCTAACTAT+TGG | + | chr3.3:1506416-1506435 | None:intergenic | 25.0% |
| ! | TATATACATATTTGCTCTTC+AGG | - | chr3.3:1509000-1509019 | MS.gene52851:intron | 25.0% |
| ! | TATGTTAAATCTCCATCAAA+CGG | + | chr3.3:1507786-1507805 | None:intergenic | 25.0% |
| ! | TATTTGTCACTAATGTAATG+AGG | - | chr3.3:1507823-1507842 | MS.gene52851:intron | 25.0% |
| ! | TGCATAGTTCAAGAAAATAT+AGG | + | chr3.3:1509565-1509584 | None:intergenic | 25.0% |
| ! | TGTAATCAGTTATCATATCA+AGG | + | chr3.3:1508595-1508614 | None:intergenic | 25.0% |
| ! | TTAAAAGAAGAAAAGAACAC+AGG | + | chr3.3:1508287-1508306 | None:intergenic | 25.0% |
| ! | TTACTAACTACTAACTTTAG+AGG | + | chr3.3:1509081-1509100 | None:intergenic | 25.0% |
| ! | TTATTGTGAATAGCTGAATT+TGG | - | chr3.3:1510348-1510367 | MS.gene52851:intron | 25.0% |
| !! | AAAGACTATTTTCACAAAGT+GGG | + | chr3.3:1506532-1506551 | None:intergenic | 25.0% |
| !! | ATTTTATGCAGTTGAAATGA+AGG | - | chr3.3:1506614-1506633 | MS.gene52851:intron | 25.0% |
| !! | GTAATTTTCTCAACAATTGA+AGG | - | chr3.3:1506072-1506091 | MS.gene52851:intron | 25.0% |
| !! | TAATACATGACAGGTTTTTA+TGG | - | chr3.3:1506482-1506501 | MS.gene52851:CDS | 25.0% |
| !! | TGATTGTTAATTTTCTTCGT+AGG | - | chr3.3:1505962-1505981 | MS.gene52851:CDS | 25.0% |
| !! | TTTTATGCAGTTGAAATGAA+GGG | - | chr3.3:1506615-1506634 | MS.gene52851:intron | 25.0% |
| !! | TTTTATTCCATTTTGCTAGA+AGG | - | chr3.3:1507730-1507749 | MS.gene52851:CDS | 25.0% |
| !!! | ACTAATATTTTTTGAGGAGT+CGG | - | chr3.3:1507132-1507151 | MS.gene52851:intron | 25.0% |
| !!! | ATTATTTTGTGCAAAAGAGT+GGG | + | chr3.3:1510518-1510537 | None:intergenic | 25.0% |
| !!! | ATTGGCACTAATATTTTTTG+AGG | - | chr3.3:1507126-1507145 | MS.gene52851:intron | 25.0% |
| !!! | GATTTGCTCTTTTGAATTTT+TGG | - | chr3.3:1507085-1507104 | MS.gene52851:intron | 25.0% |
| !!! | TTATTTCTGGACCTTTTTTA+TGG | - | chr3.3:1508052-1508071 | MS.gene52851:intron | 25.0% |
| AAAAAATGGAAATGAGCCAA+AGG | + | chr3.3:1509852-1509871 | None:intergenic | 30.0% | |
| AAGTGAATTACTCACTTTAG+AGG | - | chr3.3:1509215-1509234 | MS.gene52851:CDS | 30.0% | |
| AATTATACGAACTTGGAATC+AGG | - | chr3.3:1506958-1506977 | MS.gene52851:intron | 30.0% | |
| AATTATCATACTCTTCCGTT+TGG | + | chr3.3:1506715-1506734 | None:intergenic | 30.0% | |
| ACCACAAGGTTTAAATGAAT+TGG | + | chr3.3:1506054-1506073 | None:intergenic | 30.0% | |
| ACTTCATATTCAACCAATGA+AGG | + | chr3.3:1507924-1507943 | None:intergenic | 30.0% | |
| AGATTACATCTGCATTAGTT+GGG | - | chr3.3:1508162-1508181 | MS.gene52851:CDS | 30.0% | |
| ATAATCAATTACTAGTGTCG+TGG | - | chr3.3:1508315-1508334 | MS.gene52851:intron | 30.0% | |
| ATCATCACAAATTGGACAAT+TGG | + | chr3.3:1508368-1508387 | None:intergenic | 30.0% | |
| ATCATTGTGCAGGATTAATT+TGG | - | chr3.3:1510552-1510571 | MS.gene52851:CDS | 30.0% | |
| ATTTCTTTGGTTACGATAGT+AGG | - | chr3.3:1508082-1508101 | MS.gene52851:intron | 30.0% | |
| CAACCCATAAACATCAATAA+AGG | + | chr3.3:1509743-1509762 | None:intergenic | 30.0% | |
| CAGTTTGATCAAACTAGTAA+AGG | + | chr3.3:1509318-1509337 | None:intergenic | 30.0% | |
| CCAAAGATAAACCATAAAAC+TGG | + | chr3.3:1506459-1506478 | None:intergenic | 30.0% | |
| CTACAGGAGCAATAAAAAAA+TGG | + | chr3.3:1509866-1509885 | None:intergenic | 30.0% | |
| CTAGAAGGAAAAAATGAAGA+TGG | + | chr3.3:1507062-1507081 | None:intergenic | 30.0% | |
| GAACATGACGACTTTAATAT+AGG | + | chr3.3:1509032-1509051 | None:intergenic | 30.0% | |
| GAAGCCAATTATATACTAAC+TGG | + | chr3.3:1509669-1509688 | None:intergenic | 30.0% | |
| GACACCTTAAATACTTCAAA+TGG | + | chr3.3:1510487-1510506 | None:intergenic | 30.0% | |
| GCAAAATTGTGATAGAATGT+TGG | + | chr3.3:1505926-1505945 | None:intergenic | 30.0% | |
| GCTATTCACAATAAAACCAT+TGG | + | chr3.3:1510342-1510361 | None:intergenic | 30.0% | |
| GTGTATATAGATTACATTGC+TGG | - | chr3.3:1508800-1508819 | MS.gene52851:intron | 30.0% | |
| TAATGTTGTAGAGACATTGT+TGG | - | chr3.3:1507483-1507502 | MS.gene52851:intron | 30.0% | |
| TAGTGTCTGTAGTTTATTTC+TGG | - | chr3.3:1508039-1508058 | MS.gene52851:intron | 30.0% | |
| TATATGACAATGTGAACCTT+TGG | - | chr3.3:1509833-1509852 | MS.gene52851:CDS | 30.0% | |
| TCCAATTCATTTAAACCTTG+TGG | - | chr3.3:1506050-1506069 | MS.gene52851:intron | 30.0% | |
| TCCAGACATATATCCTATAA+AGG | - | chr3.3:1507022-1507041 | MS.gene52851:intron | 30.0% | |
| TCTTGAGTTACTTACTTGTT+TGG | - | chr3.3:1506242-1506261 | MS.gene52851:intron | 30.0% | |
| TGAACAACATCTTCAAGTAA+TGG | + | chr3.3:1508897-1508916 | None:intergenic | 30.0% | |
| TGATGTGATATGTGATCAAA+TGG | - | chr3.3:1508469-1508488 | MS.gene52851:CDS | 30.0% | |
| TGATTGTTGTCATAACTACA+AGG | - | chr3.3:1507460-1507479 | MS.gene52851:intron | 30.0% | |
| TTATAGGATATATGTCTGGA+TGG | + | chr3.3:1507022-1507041 | None:intergenic | 30.0% | |
| TTATCTTGATGCATGTCAAT+TGG | - | chr3.3:1507108-1507127 | MS.gene52851:intron | 30.0% | |
| TTCCTTAAGTCTATCAACTT+CGG | + | chr3.3:1508129-1508148 | None:intergenic | 30.0% | |
| TTGATCAGTTATATCCAACA+AGG | + | chr3.3:1508407-1508426 | None:intergenic | 30.0% | |
| TTGTTGAGAAAATTACCACA+AGG | + | chr3.3:1506068-1506087 | None:intergenic | 30.0% | |
| TTTATCACTGAAAGGAACAT+AGG | + | chr3.3:1507710-1507729 | None:intergenic | 30.0% | |
| ! | AAATATAGGCTTTAGCCAAA+AGG | + | chr3.3:1509551-1509570 | None:intergenic | 30.0% |
| ! | ATTGGACATTTTGTGATCTT+CGG | - | chr3.3:1508004-1508023 | MS.gene52851:intron | 30.0% |
| ! | CAAAGACTATTTTCACAAAG+TGG | + | chr3.3:1506533-1506552 | None:intergenic | 30.0% |
| ! | CTGTCCATTTGAAGTATTTA+AGG | - | chr3.3:1510480-1510499 | MS.gene52851:intron | 30.0% |
| ! | GTTAATTTTCTTCGTAGGTA+CGG | - | chr3.3:1505967-1505986 | MS.gene52851:CDS | 30.0% |
| ! | TCATTTTCTGCTTACAGTTT+AGG | + | chr3.3:1506281-1506300 | None:intergenic | 30.0% |
| !! | ATGTCAGAGTTATTTTCCAA+TGG | - | chr3.3:1510323-1510342 | MS.gene52851:intron | 30.0% |
| !! | CCAGTTTTATGGTTTATCTT+TGG | - | chr3.3:1506456-1506475 | MS.gene52851:CDS | 30.0% |
| !! | GATATGGGTTGAATTTTACA+AGG | - | chr3.3:1508186-1508205 | MS.gene52851:CDS | 30.0% |
| !! | GATTATTTTGTGCAAAAGAG+TGG | + | chr3.3:1510519-1510538 | None:intergenic | 30.0% |
| !! | TTAGCTCTATTGATGTGAAT+TGG | - | chr3.3:1507986-1508005 | MS.gene52851:intron | 30.0% |
| !! | TTATTTTGTGCAAAAGAGTG+GGG | + | chr3.3:1510517-1510536 | None:intergenic | 30.0% |
| !!! | CATCTTCATTTTTTCCTTCT+AGG | - | chr3.3:1507060-1507079 | MS.gene52851:intron | 30.0% |
| !!! | CTAATATTTTTTGAGGAGTC+GGG | - | chr3.3:1507133-1507152 | MS.gene52851:intron | 30.0% |
| !!! | CTAATGATTTGTTCTCCTTT+TGG | - | chr3.3:1509795-1509814 | MS.gene52851:CDS | 30.0% |
| !!! | TGGTTTTATTGCAAAGTAGT+GGG | - | chr3.3:1510040-1510059 | MS.gene52851:intron | 30.0% |
| !!! | TTGGTTTTATTGCAAAGTAG+TGG | - | chr3.3:1510039-1510058 | MS.gene52851:intron | 30.0% |
| AAAAGAGCGGAAATTGTCTT+TGG | - | chr3.3:1506848-1506867 | MS.gene52851:intron | 35.0% | |
| AAAGAAAAGGATAAGGGAGT+TGG | - | chr3.3:1506785-1506804 | MS.gene52851:intron | 35.0% | |
| AAAGAGCAAATCTACCTAGA+AGG | + | chr3.3:1507077-1507096 | None:intergenic | 35.0% | |
| ACTTATGCATCTCTCTTATC+TGG | - | chr3.3:1507293-1507312 | MS.gene52851:intron | 35.0% | |
| AGAACACAGGGAAAATCAAA+AGG | + | chr3.3:1508274-1508293 | None:intergenic | 35.0% | |
| AGAGTTTGACAAAATCCAGA+AGG | - | chr3.3:1510093-1510112 | MS.gene52851:intron | 35.0% | |
| ATATCCTATAAAGGCAACTC+AGG | - | chr3.3:1507031-1507050 | MS.gene52851:intron | 35.0% | |
| ATCTCTCTTATCTGGCAAAT+AGG | - | chr3.3:1507301-1507320 | MS.gene52851:intron | 35.0% | |
| CAAGAACTACAAAAGCTTAC+AGG | + | chr3.3:1510292-1510311 | None:intergenic | 35.0% | |
| CATGCATAACAACTCATTAG+TGG | + | chr3.3:1509133-1509152 | None:intergenic | 35.0% | |
| CTTGTGTTAATAGAGGATGT+CGG | - | chr3.3:1506355-1506374 | MS.gene52851:CDS | 35.0% | |
| GAGATTACATCTGCATTAGT+TGG | - | chr3.3:1508161-1508180 | MS.gene52851:CDS | 35.0% | |
| GAGGAAGAATTATACGAACT+TGG | - | chr3.3:1506951-1506970 | MS.gene52851:intron | 35.0% | |
| GATAGAATGTTGGAAAAACC+TGG | + | chr3.3:1505916-1505935 | None:intergenic | 35.0% | |
| GATGTAATCTCATCCAAGAT+AGG | + | chr3.3:1508152-1508171 | None:intergenic | 35.0% | |
| GATGTAGAGCAAGATTAAGA+AGG | - | chr3.3:1506430-1506449 | MS.gene52851:CDS | 35.0% | |
| GCACAAAATAATCATTGTGC+AGG | - | chr3.3:1510526-1510545 | MS.gene52851:intron | 35.0% | |
| GCCTTTATAGGATATATGTC+TGG | + | chr3.3:1507026-1507045 | None:intergenic | 35.0% | |
| GTAGGATTTCAGGAAAAAGA+AGG | - | chr3.3:1508100-1508119 | MS.gene52851:intron | 35.0% | |
| GTGATCTTCGGTATTCTTAT+AGG | - | chr3.3:1508016-1508035 | MS.gene52851:intron | 35.0% | |
| GTTTGCATTGCTAATGCAAA+TGG | - | chr3.3:1506183-1506202 | MS.gene52851:intron | 35.0% | |
| TAAATGGATGGAAATCTCCT+TGG | - | chr3.3:1506889-1506908 | MS.gene52851:intron | 35.0% | |
| TAATCCTCGTCAAACAAACT+CGG | + | chr3.3:1506999-1507018 | None:intergenic | 35.0% | |
| TAATGTAATGAGGCCTTCAT+TGG | - | chr3.3:1507833-1507852 | MS.gene52851:intron | 35.0% | |
| TAGACTTAAGGAACCTATCT+TGG | - | chr3.3:1508136-1508155 | MS.gene52851:intron | 35.0% | |
| TAGCTCTCTCACATATAAAC+AGG | - | chr3.3:1508703-1508722 | MS.gene52851:intron | 35.0% | |
| TATAGATTACATTGCTGGAG+TGG | - | chr3.3:1508805-1508824 | MS.gene52851:intron | 35.0% | |
| TATCAGAAATCCTCTTGTCT+GGG | + | chr3.3:1507512-1507531 | None:intergenic | 35.0% | |
| TCAACTGGATGTTCTTGTAA+GGG | - | chr3.3:1506821-1506840 | MS.gene52851:intron | 35.0% | |
| TCCGACAAAGAAAAGGATAA+GGG | - | chr3.3:1506779-1506798 | MS.gene52851:intron | 35.0% | |
| TCCTTAAGTCTATCAACTTC+GGG | + | chr3.3:1508128-1508147 | None:intergenic | 35.0% | |
| TGAAGATGTTGTTCAATCCA+TGG | - | chr3.3:1508902-1508921 | MS.gene52851:intron | 35.0% | |
| TGAGCTAATTAAACTAGGAG+AGG | - | chr3.3:1506932-1506951 | MS.gene52851:intron | 35.0% | |
| TGTTGTGATATGCTAACTGT+TGG | - | chr3.3:1509504-1509523 | MS.gene52851:intron | 35.0% | |
| TTCCATCCATTTAACCAAGA+CGG | + | chr3.3:1506882-1506901 | None:intergenic | 35.0% | |
| TTGGAATCAGGATTAGAGAA+AGG | - | chr3.3:1506970-1506989 | MS.gene52851:intron | 35.0% | |
| TTGTAAGGGATGTAAAAGAG+CGG | - | chr3.3:1506835-1506854 | MS.gene52851:intron | 35.0% | |
| TTGTGTTAATAGAGGATGTC+GGG | - | chr3.3:1506356-1506375 | MS.gene52851:CDS | 35.0% | |
| ! | CAATATTTTCCCAGCAGAAA+AGG | + | chr3.3:1507675-1507694 | None:intergenic | 35.0% |
| ! | CATCCTTGAGGAATTTTAGA+AGG | + | chr3.3:1506027-1506046 | None:intergenic | 35.0% |
| ! | GCGTTTATTCTAAAGGGTTA+TGG | - | chr3.3:1508843-1508862 | MS.gene52851:intron | 35.0% |
| ! | GGTTTATTTCTTGAAGAGTC+TGG | - | chr3.3:1509969-1509988 | MS.gene52851:intron | 35.0% |
| ! | TAAGAAGGATGCCAGTTTTA+TGG | - | chr3.3:1506445-1506464 | MS.gene52851:CDS | 35.0% |
| ! | TCCCTTATCCTTTTCTTTGT+CGG | + | chr3.3:1506783-1506802 | None:intergenic | 35.0% |
| ! | TTCATGTCTCAATTTTGCAG+CGG | + | chr3.3:1507251-1507270 | None:intergenic | 35.0% |
| ! | TTTCTGTGATTTTTCTCCAC+AGG | - | chr3.3:1510603-1510622 | MS.gene52851:CDS | 35.0% |
| !! | ACTACAAAAGTACCTCCAAT+GGG | + | chr3.3:1508447-1508466 | None:intergenic | 35.0% |
| !! | GTTCCTTCTAAAATTCCTCA+AGG | - | chr3.3:1506021-1506040 | MS.gene52851:intron | 35.0% |
| !! | TCTCTGGTTCTTATGTAAAC+AGG | - | chr3.3:1508223-1508242 | MS.gene52851:intron | 35.0% |
| !! | TTGGAGGCGTTTATTCTAAA+GGG | - | chr3.3:1508837-1508856 | MS.gene52851:intron | 35.0% |
| !!! | ATGATTTGTTCTCCTTTTGG+AGG | - | chr3.3:1509798-1509817 | MS.gene52851:CDS | 35.0% |
| AAACCAAGCAGACATGAGAA+TGG | + | chr3.3:1509954-1509973 | None:intergenic | 40.0% | |
| AAATCTCAGCAAGATGTCAC+TGG | + | chr3.3:1507438-1507457 | None:intergenic | 40.0% | |
| AACCAAGCAGACATGAGAAT+GGG | + | chr3.3:1509953-1509972 | None:intergenic | 40.0% | |
| AATCCAGAAGGAGAAACCTT+TGG | - | chr3.3:1510105-1510124 | MS.gene52851:intron | 40.0% | |
| AGAGTTCCGTCTTGGTTAAA+TGG | - | chr3.3:1506873-1506892 | MS.gene52851:intron | 40.0% | |
| AGCATGTTGTTACCAGCAAA+AGG | + | chr3.3:1510184-1510203 | None:intergenic | 40.0% | |
| AGCCTCCACAGAAAAGAAAA+TGG | - | chr3.3:1510140-1510159 | MS.gene52851:intron | 40.0% | |
| AGGGAAAATCAAAAGGAGCT+GGG | + | chr3.3:1508267-1508286 | None:intergenic | 40.0% | |
| ATCCATGGAGCAAGCTATTA+AGG | - | chr3.3:1508917-1508936 | MS.gene52851:intron | 40.0% | |
| ATGTTGGAAAAACCTGGAGA+CGG | + | chr3.3:1505910-1505929 | None:intergenic | 40.0% | |
| ATTTCTTGAAGAGTCTGGTG+AGG | - | chr3.3:1509974-1509993 | MS.gene52851:intron | 40.0% | |
| CAAGCTATTAAGGCTGAAGA+AGG | - | chr3.3:1508927-1508946 | MS.gene52851:intron | 40.0% | |
| CAGCACCATGCATATTTCAA+GGG | + | chr3.3:1509251-1509270 | None:intergenic | 40.0% | |
| CAGGTTCTGTGTTGAACTTA+TGG | - | chr3.3:1508722-1508741 | MS.gene52851:intron | 40.0% | |
| CATCACAACTCAACCAATGA+AGG | + | chr3.3:1507849-1507868 | None:intergenic | 40.0% | |
| CTACAAAAGCTTACAGGCAT+TGG | + | chr3.3:1510286-1510305 | None:intergenic | 40.0% | |
| CTCAACTGGATGTTCTTGTA+AGG | - | chr3.3:1506820-1506839 | MS.gene52851:intron | 40.0% | |
| CTCCACAGAAAAGAAAATGG+CGG | - | chr3.3:1510143-1510162 | MS.gene52851:intron | 40.0% | |
| CTCCGACAAAGAAAAGGATA+AGG | - | chr3.3:1506778-1506797 | MS.gene52851:intron | 40.0% | |
| CTTGTCCCTTGAAATATGCA+TGG | - | chr3.3:1509243-1509262 | MS.gene52851:CDS | 40.0% | |
| CTTTGGACCTAATACATGAC+AGG | - | chr3.3:1506473-1506492 | MS.gene52851:CDS | 40.0% | |
| GCGGCACTTCAATTTAATCA+TGG | + | chr3.3:1507232-1507251 | None:intergenic | 40.0% | |
| GGCATATTACATCATCTCTC+TGG | - | chr3.3:1508207-1508226 | MS.gene52851:intron | 40.0% | |
| GGGAAAATATTGAAGACCGT+GGG | - | chr3.3:1507683-1507702 | MS.gene52851:CDS | 40.0% | |
| GGTTACGATAGTAGGATTTC+AGG | - | chr3.3:1508090-1508109 | MS.gene52851:intron | 40.0% | |
| GTATCAGAAATCCTCTTGTC+TGG | + | chr3.3:1507513-1507532 | None:intergenic | 40.0% | |
| TAGTGCTATGTTACATTCCC+AGG | - | chr3.3:1506737-1506756 | MS.gene52851:intron | 40.0% | |
| TCATAGTCATGCTTCTGATG+AGG | + | chr3.3:1510643-1510662 | None:intergenic | 40.0% | |
| TCCACAGAAAAGAAAATGGC+GGG | - | chr3.3:1510144-1510163 | MS.gene52851:intron | 40.0% | |
| TCTATTAACACAAGTCAGCG+AGG | + | chr3.3:1506349-1506368 | None:intergenic | 40.0% | |
| TGAATTGGAGTACATCCTTG+AGG | + | chr3.3:1506039-1506058 | None:intergenic | 40.0% | |
| TGCAAGATACAACCTCCAAA+AGG | + | chr3.3:1509813-1509832 | None:intergenic | 40.0% | |
| TGGGAAAATATTGAAGACCG+TGG | - | chr3.3:1507682-1507701 | MS.gene52851:CDS | 40.0% | |
| TTAATAGAGGATGTCGGGTT+TGG | - | chr3.3:1506361-1506380 | MS.gene52851:CDS | 40.0% | |
| TTCCGTCTTGGTTAAATGGA+TGG | - | chr3.3:1506877-1506896 | MS.gene52851:intron | 40.0% | |
| ! | CTTCATTGGTTGAGTTGTGA+TGG | - | chr3.3:1507847-1507866 | MS.gene52851:intron | 40.0% |
| ! | GGATAATTTGTCAGCTCAAC+TGG | - | chr3.3:1506806-1506825 | MS.gene52851:intron | 40.0% |
| ! | TATGGGTTGAAATCCCGTTA+TGG | - | chr3.3:1509754-1509773 | MS.gene52851:CDS | 40.0% |
| ! | TATTTTCCCAGCAGAAAAGG+TGG | + | chr3.3:1507672-1507691 | None:intergenic | 40.0% |
| ! | TCGTTGTGTTATTCACTGCA+GGG | - | chr3.3:1510439-1510458 | MS.gene52851:intron | 40.0% |
| ! | TTCGTTGTGTTATTCACTGC+AGG | - | chr3.3:1510438-1510457 | MS.gene52851:intron | 40.0% |
| ! | TTTCTTTTCTGTGGAGGCTT+TGG | + | chr3.3:1510139-1510158 | None:intergenic | 40.0% |
| !! | AAAGCTTACAGGCATTGGAA+TGG | + | chr3.3:1510281-1510300 | None:intergenic | 40.0% |
| !! | AAGCTTACAGGCATTGGAAT+GGG | + | chr3.3:1510280-1510299 | None:intergenic | 40.0% |
| !! | ACCCGAAGTTGATAGACTTA+AGG | - | chr3.3:1508124-1508143 | MS.gene52851:intron | 40.0% |
| !! | ATAACAGGAAGCATCCTTGT+TGG | - | chr3.3:1508390-1508409 | MS.gene52851:CDS | 40.0% |
| !! | CTTGGAGGCGTTTATTCTAA+AGG | - | chr3.3:1508836-1508855 | MS.gene52851:intron | 40.0% |
| !! | GAAAGCACCTTCTAGCAAAA+TGG | + | chr3.3:1507740-1507759 | None:intergenic | 40.0% |
| !! | GACTACAAAAGTACCTCCAA+TGG | + | chr3.3:1508448-1508467 | None:intergenic | 40.0% |
| !! | GCTTTGAAAAAGCAAGACTC+CGG | - | chr3.3:1509904-1509923 | MS.gene52851:intron | 40.0% |
| !! | TCGCTGACTTGTGTTAATAG+AGG | - | chr3.3:1506348-1506367 | MS.gene52851:CDS | 40.0% |
| !! | TGGCATTGATTGATCAATGC+AGG | - | chr3.3:1506502-1506521 | MS.gene52851:intron | 40.0% |
| !! | TTTGGAATGGGTCTTTTCAG+TGG | - | chr3.3:1507353-1507372 | MS.gene52851:intron | 40.0% |
| !!! | GGTGCAACTATTTTTTCCTG+TGG | + | chr3.3:1510622-1510641 | None:intergenic | 40.0% |
| CAGGGAAAATCAAAAGGAGC+TGG | + | chr3.3:1508268-1508287 | None:intergenic | 45.0% | |
| CAGTTTCTGCATGAGCAAAC+CGG | + | chr3.3:1509926-1509945 | None:intergenic | 45.0% | |
| CCACAGAAAAGAAAATGGCG+GGG | - | chr3.3:1510145-1510164 | MS.gene52851:intron | 45.0% | |
| CCAGCACCATGCATATTTCA+AGG | + | chr3.3:1509252-1509271 | None:intergenic | 45.0% | |
| CCTTGAAATATGCATGGTGC+TGG | - | chr3.3:1509249-1509268 | MS.gene52851:CDS | 45.0% | |
| CTATGTTACATTCCCAGGCA+AGG | - | chr3.3:1506742-1506761 | MS.gene52851:intron | 45.0% | |
| CTCACCTGAGTTGCCTTTAT+AGG | + | chr3.3:1507038-1507057 | None:intergenic | 45.0% | |
| CTCGTTCTCCGACAAAGAAA+AGG | - | chr3.3:1506772-1506791 | MS.gene52851:intron | 45.0% | |
| CTGCATTAGTTGGGCGATAT+GGG | - | chr3.3:1508171-1508190 | MS.gene52851:CDS | 45.0% | |
| GAGGAGTCAAGTTCGTCTTA+AGG | + | chr3.3:1509062-1509081 | None:intergenic | 45.0% | |
| GGCGGTGAGCTAATTAAACT+AGG | - | chr3.3:1506927-1506946 | MS.gene52851:intron | 45.0% | |
| GTGCAGGATAATCATTGTGC+AGG | - | chr3.3:1510542-1510561 | MS.gene52851:CDS | 45.0% | |
| TAGTGCTGTGGCATTTGGAA+TGG | - | chr3.3:1507340-1507359 | MS.gene52851:intron | 45.0% | |
| TATTCACTGCAGGGTTGTCA+TGG | - | chr3.3:1510448-1510467 | MS.gene52851:intron | 45.0% | |
| TCTGCATTAGTTGGGCGATA+TGG | - | chr3.3:1508170-1508189 | MS.gene52851:CDS | 45.0% | |
| TGAAAGGAACATAGGACCCA+CGG | + | chr3.3:1507702-1507721 | None:intergenic | 45.0% | |
| TTCAGTGGCAATGGAACTCT+TGG | - | chr3.3:1507368-1507387 | MS.gene52851:intron | 45.0% | |
| ! | AGTGCTGTGGCATTTGGAAT+GGG | - | chr3.3:1507341-1507360 | MS.gene52851:intron | 45.0% |
| ! | ATGGGTCTTTTCAGTGGCAA+TGG | - | chr3.3:1507359-1507378 | MS.gene52851:intron | 45.0% |
| ! | CGAGCATGTTTTATCCCCTT+TGG | + | chr3.3:1507177-1507196 | None:intergenic | 45.0% |
| ! | GTGTAGTCTTTTCAGCCCAT+TGG | - | chr3.3:1508429-1508448 | MS.gene52851:CDS | 45.0% |
| ! | GTTTCCGAGTTTGTTTGACG+AGG | - | chr3.3:1506992-1507011 | MS.gene52851:intron | 45.0% |
| ! | GTTTTATCCCCTTTGGACCT+GGG | + | chr3.3:1507170-1507189 | None:intergenic | 45.0% |
| ! | TAGTCTTTTCAGCCCATTGG+AGG | - | chr3.3:1508432-1508451 | MS.gene52851:CDS | 45.0% |
| ! | TGTTTTATCCCCTTTGGACC+TGG | + | chr3.3:1507171-1507190 | None:intergenic | 45.0% |
| ! | TTGTCTGTCATGCCGTTTGA+TGG | - | chr3.3:1507771-1507790 | MS.gene52851:CDS | 45.0% |
| !! | AGCCTTAATAGCTTGCTCCA+TGG | + | chr3.3:1508922-1508941 | None:intergenic | 45.0% |
| !! | AGCTTACAGGCATTGGAATG+GGG | + | chr3.3:1510279-1510298 | None:intergenic | 45.0% |
| !! | CGCCATTTTCTTTTCTGTGG+AGG | + | chr3.3:1510145-1510164 | None:intergenic | 45.0% |
| !! | TTGTTGGTTTCCCAGACAAG+AGG | - | chr3.3:1507499-1507518 | MS.gene52851:intron | 45.0% |
| !!! | CTTGCTTTTTCAAAGCTGCC+AGG | + | chr3.3:1509900-1509919 | None:intergenic | 45.0% |
| !!! | AATTTTATAAATTTCAATTT+TGG | - | chr3.3:1510020-1510039 | MS.gene52851:intron | 5.0% |
| CCTTGGCAAGGAAGGCTTAA+AGG | - | chr3.3:1506906-1506925 | MS.gene52851:intron | 50.0% | |
| CCTTTAAGCCTTCCTTGCCA+AGG | + | chr3.3:1506909-1506928 | None:intergenic | 50.0% | |
| CTAACCGCTTCTTGGCCAAA+CGG | - | chr3.3:1506697-1506716 | MS.gene52851:CDS | 50.0% | |
| CTGACGCAGGACAACTATAC+AGG | + | chr3.3:1510210-1510229 | None:intergenic | 50.0% | |
| CTGTATAGTTGTCCTGCGTC+AGG | - | chr3.3:1510208-1510227 | MS.gene52851:intron | 50.0% | |
| GCTCCAAAGGTTTCTCCTTC+TGG | + | chr3.3:1510111-1510130 | None:intergenic | 50.0% | |
| GGAAATCTCCTTGGCAAGGA+AGG | - | chr3.3:1506898-1506917 | MS.gene52851:intron | 50.0% | |
| GGATGGAAATCTCCTTGGCA+AGG | - | chr3.3:1506894-1506913 | MS.gene52851:intron | 50.0% | |
| GGCAATGGAACTCTTGGAAC+TGG | - | chr3.3:1507374-1507393 | MS.gene52851:intron | 50.0% | |
| GTCCCATTCTCATGTCTGCT+TGG | - | chr3.3:1509948-1509967 | MS.gene52851:intron | 50.0% | |
| TCAGCTAGTGCTGTGGCATT+TGG | - | chr3.3:1507335-1507354 | MS.gene52851:intron | 50.0% | |
| TCTTCCGTTTGGCCAAGAAG+CGG | + | chr3.3:1506704-1506723 | None:intergenic | 50.0% | |
| TGGAATATCATGCTCCGCGA+GGG | + | chr3.3:1510697-1510716 | None:intergenic | 50.0% | |
| TGGCAAGGAAGGCTTAAAGG+CGG | - | chr3.3:1506909-1506928 | MS.gene52851:intron | 50.0% | |
| TTACATTCCCAGGCAAGGCA+TGG | - | chr3.3:1506747-1506766 | MS.gene52851:intron | 50.0% | |
| TTGGAAAAACCTGGAGACGG+TGG | + | chr3.3:1505907-1505926 | None:intergenic | 50.0% | |
| TTGGAATATCATGCTCCGCG+AGG | + | chr3.3:1510698-1510717 | None:intergenic | 50.0% | |
| TTTGAGGAGTCGGGAAACAC+TGG | - | chr3.3:1507142-1507161 | MS.gene52851:intron | 50.0% | |
| TTTGGCCAAGAAGCGGTTAG+TGG | + | chr3.3:1506697-1506716 | None:intergenic | 50.0% | |
| ! | AGAGGATGTCGGGTTTGGTA+AGG | - | chr3.3:1506366-1506385 | MS.gene52851:CDS | 50.0% |
| ! | CACATGCCACCTTTTCTGCT+GGG | - | chr3.3:1507663-1507682 | MS.gene52851:CDS | 50.0% |
| ! | CTTTGGAGAGAGTTCCGTCT+TGG | - | chr3.3:1506865-1506884 | MS.gene52851:intron | 50.0% |
| ! | GATGTCGGGTTTGGTAAGGA+GGG | - | chr3.3:1506370-1506389 | MS.gene52851:CDS | 50.0% |
| !! | CCCCGCCATTTTCTTTTCTG+TGG | + | chr3.3:1510148-1510167 | None:intergenic | 50.0% |
| !! | CTTTTCTGTGGAGGCTTTGG+AGG | + | chr3.3:1510136-1510155 | None:intergenic | 50.0% |
| !!! | CTTTTAGCTTTGCCTGACGC+AGG | + | chr3.3:1510223-1510242 | None:intergenic | 50.0% |
| AACATCTCTCCACCGTCTCC+AGG | - | chr3.3:1505895-1505914 | MS.gene52851:CDS | 55.0% | |
| AACGAGTTCCATGCCTTGCC+TGG | + | chr3.3:1506758-1506777 | None:intergenic | 55.0% | |
| ACAGCACTAGCTGATGCTCG+GGG | + | chr3.3:1507329-1507348 | None:intergenic | 55.0% | |
| ACGAGTTCCATGCCTTGCCT+GGG | + | chr3.3:1506757-1506776 | None:intergenic | 55.0% | |
| CACAGCACTAGCTGATGCTC+GGG | + | chr3.3:1507330-1507349 | None:intergenic | 55.0% | |
| CCACAGCACTAGCTGATGCT+CGG | + | chr3.3:1507331-1507350 | None:intergenic | 55.0% | |
| CCAGCAGAAAAGGTGGCATG+TGG | + | chr3.3:1507665-1507684 | None:intergenic | 55.0% | |
| GCTGGAGTGGACAGATGACT+TGG | - | chr3.3:1508818-1508837 | MS.gene52851:intron | 55.0% | |
| GGTGGCATGTGGAGATTGTG+TGG | + | chr3.3:1507654-1507673 | None:intergenic | 55.0% | |
| ! | AAAATGGCGGGGTAGCAGTG+TGG | - | chr3.3:1510156-1510175 | MS.gene52851:intron | 55.0% |
| ! | ACTGGTTCCCAGGTCCAAAG+GGG | - | chr3.3:1507160-1507179 | MS.gene52851:intron | 55.0% |
| ! | AGCAGTGTGGCTCCTTTTGC+TGG | - | chr3.3:1510169-1510188 | MS.gene52851:intron | 55.0% |
| ! | CCACATGCCACCTTTTCTGC+TGG | - | chr3.3:1507662-1507681 | MS.gene52851:intron | 55.0% |
| ! | GGAGTGGACAGATGACTTGG+AGG | - | chr3.3:1508821-1508840 | MS.gene52851:intron | 55.0% |
| ! | GGATGTCGGGTTTGGTAAGG+AGG | - | chr3.3:1506369-1506388 | MS.gene52851:CDS | 55.0% |
| !! | ACACTGGTTCCCAGGTCCAA+AGG | - | chr3.3:1507158-1507177 | MS.gene52851:intron | 55.0% |
| !! | CACTGGTTCCCAGGTCCAAA+GGG | - | chr3.3:1507159-1507178 | MS.gene52851:intron | 55.0% |
| !! | GGCTTTGGAGGTAGCTCCAA+AGG | + | chr3.3:1510124-1510143 | None:intergenic | 55.0% |
| ATCATGCTCCGCGAGGGCTT+CGG | + | chr3.3:1510691-1510710 | None:intergenic | 60.0% | |
| CCGAGCATCAGCTAGTGCTG+TGG | - | chr3.3:1507328-1507347 | MS.gene52851:intron | 60.0% | |
| !! | GTCGGGAAACACTGGTTCCC+AGG | - | chr3.3:1507150-1507169 | MS.gene52851:intron | 60.0% |
| AGCAAGAGCCGAAGCCCTCG+CGG | - | chr3.3:1510680-1510699 | MS.gene52851:CDS | 65.0% | |
| GGGCGCCACTAACCGCTTCT+TGG | - | chr3.3:1506689-1506708 | MS.gene52851:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 1505886 | 1510725 | 1505886 | ID=MS.gene52851 |
| chr3.3 | mRNA | 1505886 | 1510725 | 1505886 | ID=MS.gene52851.t1;Parent=MS.gene52851 |
| chr3.3 | exon | 1510540 | 1510725 | 1510540 | ID=MS.gene52851.t1.exon1;Parent=MS.gene52851.t1 |
| chr3.3 | CDS | 1510540 | 1510725 | 1510540 | ID=cds.MS.gene52851.t1;Parent=MS.gene52851.t1 |
| chr3.3 | exon | 1509559 | 1509852 | 1509559 | ID=MS.gene52851.t1.exon2;Parent=MS.gene52851.t1 |
| chr3.3 | CDS | 1509559 | 1509852 | 1509559 | ID=cds.MS.gene52851.t1;Parent=MS.gene52851.t1 |
| chr3.3 | exon | 1509130 | 1509288 | 1509130 | ID=MS.gene52851.t1.exon3;Parent=MS.gene52851.t1 |
| chr3.3 | CDS | 1509130 | 1509288 | 1509130 | ID=cds.MS.gene52851.t1;Parent=MS.gene52851.t1 |
| chr3.3 | exon | 1508367 | 1508507 | 1508367 | ID=MS.gene52851.t1.exon4;Parent=MS.gene52851.t1 |
| chr3.3 | CDS | 1508367 | 1508507 | 1508367 | ID=cds.MS.gene52851.t1;Parent=MS.gene52851.t1 |
| chr3.3 | exon | 1508158 | 1508214 | 1508158 | ID=MS.gene52851.t1.exon5;Parent=MS.gene52851.t1 |
| chr3.3 | CDS | 1508158 | 1508214 | 1508158 | ID=cds.MS.gene52851.t1;Parent=MS.gene52851.t1 |
| chr3.3 | exon | 1507663 | 1507801 | 1507663 | ID=MS.gene52851.t1.exon6;Parent=MS.gene52851.t1 |
| chr3.3 | CDS | 1507663 | 1507801 | 1507663 | ID=cds.MS.gene52851.t1;Parent=MS.gene52851.t1 |
| chr3.3 | exon | 1506621 | 1506725 | 1506621 | ID=MS.gene52851.t1.exon7;Parent=MS.gene52851.t1 |
| chr3.3 | CDS | 1506621 | 1506725 | 1506621 | ID=cds.MS.gene52851.t1;Parent=MS.gene52851.t1 |
| chr3.3 | exon | 1506320 | 1506516 | 1506320 | ID=MS.gene52851.t1.exon8;Parent=MS.gene52851.t1 |
| chr3.3 | CDS | 1506320 | 1506516 | 1506320 | ID=cds.MS.gene52851.t1;Parent=MS.gene52851.t1 |
| chr3.3 | exon | 1506110 | 1506151 | 1506110 | ID=MS.gene52851.t1.exon9;Parent=MS.gene52851.t1 |
| chr3.3 | CDS | 1506110 | 1506151 | 1506110 | ID=cds.MS.gene52851.t1;Parent=MS.gene52851.t1 |
| chr3.3 | exon | 1505886 | 1505986 | 1505886 | ID=MS.gene52851.t1.exon10;Parent=MS.gene52851.t1 |
| chr3.3 | CDS | 1505886 | 1505986 | 1505886 | ID=cds.MS.gene52851.t1;Parent=MS.gene52851.t1 |
| Gene Sequence |
| Protein sequence |
