Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058792.t1 | XP_013460772.1 | 94.8 | 496 | 24 | 2 | 1 | 496 | 1 | 494 | 1.70E-275 | 958 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058792.t1 | Q54ND5 | 24.5 | 457 | 277 | 9 | 58 | 465 | 102 | 539 | 1.9e-33 | 145.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058792.t1 | A0A072UZE6 | 94.8 | 496 | 24 | 2 | 1 | 496 | 1 | 494 | 1.2e-275 | 958.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050719 | MS.gene058792 | 0.817322 | 3.50E-52 | -1.69E-46 |
| MS.gene050721 | MS.gene058792 | 0.81885 | 1.58E-52 | -1.69E-46 |
| MS.gene050724 | MS.gene058792 | 0.815863 | 7.43E-52 | -1.69E-46 |
| MS.gene050787 | MS.gene058792 | 0.821041 | 4.99E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene058792 | 0.818062 | 2.38E-52 | -1.69E-46 |
| MS.gene052896 | MS.gene058792 | 0.813856 | 2.07E-51 | -1.69E-46 |
| MS.gene058792 | MS.gene058793 | 0.974743 | 1.07E-138 | -1.69E-46 |
| MS.gene058792 | MS.gene060572 | 0.805883 | 1.08E-49 | -1.69E-46 |
| MS.gene058792 | MS.gene060781 | 0.803273 | 3.77E-49 | -1.69E-46 |
| MS.gene058792 | MS.gene066974 | 0.819737 | 9.92E-53 | -1.69E-46 |
| MS.gene058792 | MS.gene06705 | 0.808243 | 3.41E-50 | -1.69E-46 |
| MS.gene058792 | MS.gene06922 | 0.806389 | 8.42E-50 | -1.69E-46 |
| MS.gene058792 | MS.gene07115 | 0.832242 | 1.06E-55 | -1.69E-46 |
| MS.gene058792 | MS.gene072584 | 0.818446 | 1.95E-52 | -1.69E-46 |
| MS.gene058792 | MS.gene072624 | 0.802487 | 5.48E-49 | -1.69E-46 |
| MS.gene058792 | MS.gene072627 | 0.802659 | 5.05E-49 | -1.69E-46 |
| MS.gene058792 | MS.gene072630 | 0.8036 | 3.23E-49 | -1.69E-46 |
| MS.gene058792 | MS.gene09740 | 0.808736 | 2.67E-50 | -1.69E-46 |
| MS.gene058792 | MS.gene21881 | 0.817432 | 3.31E-52 | -1.69E-46 |
| MS.gene058792 | MS.gene24319 | 0.806569 | 7.72E-50 | -1.69E-46 |
| MS.gene058792 | MS.gene24908 | 0.809538 | 1.80E-50 | -1.69E-46 |
| MS.gene058792 | MS.gene28322 | 0.805405 | 1.36E-49 | -1.69E-46 |
| MS.gene058792 | MS.gene28638 | 0.820041 | 8.46E-53 | -1.69E-46 |
| MS.gene058792 | MS.gene33527 | 0.822512 | 2.28E-53 | -1.69E-46 |
| MS.gene058792 | MS.gene36677 | 0.806943 | 6.43E-50 | -1.69E-46 |
| MS.gene058792 | MS.gene36899 | 0.807236 | 5.58E-50 | -1.69E-46 |
| MS.gene058792 | MS.gene38494 | 0.807944 | 3.95E-50 | -1.69E-46 |
| MS.gene058792 | MS.gene48577 | 0.802078 | 6.65E-49 | -1.69E-46 |
| MS.gene058792 | MS.gene49003 | 0.800753 | 1.24E-48 | -1.69E-46 |
| MS.gene058792 | MS.gene52851 | 0.968763 | 3.85E-129 | -1.69E-46 |
| MS.gene058792 | MS.gene52855 | 0.954522 | 2.45E-112 | -1.69E-46 |
| MS.gene058792 | MS.gene52856 | 0.97951 | 3.97E-148 | -1.69E-46 |
| MS.gene058792 | MS.gene55219 | -0.800685 | 1.28E-48 | -1.69E-46 |
| MS.gene058792 | MS.gene57565 | 0.815602 | 8.50E-52 | -1.69E-46 |
| MS.gene058792 | MS.gene57566 | 0.815323 | 9.81E-52 | -1.69E-46 |
| MS.gene058792 | MS.gene73273 | 0.833339 | 5.64E-56 | -1.69E-46 |
| MS.gene058792 | MS.gene76403 | 0.808002 | 3.84E-50 | -1.69E-46 |
| MS.gene058792 | MS.gene84326 | 0.805083 | 1.58E-49 | -1.69E-46 |
| MS.gene058792 | MS.gene87771 | 0.808287 | 3.33E-50 | -1.69E-46 |
| MS.gene058792 | MS.gene90917 | 0.808033 | 3.78E-50 | -1.69E-46 |
| MS.gene058792 | MS.gene99462 | 0.825667 | 4.14E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058792.t1 | MTR_3g071580 | 94.758 | 496 | 24 | 2 | 1 | 496 | 1 | 494 | 0.0 | 938 |
| MS.gene058792.t1 | MTR_3g071580 | 94.501 | 491 | 25 | 2 | 1 | 491 | 1 | 489 | 0.0 | 925 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058792.t1 | AT1G09870 | 64.549 | 488 | 157 | 4 | 2 | 484 | 3 | 479 | 0.0 | 665 |
Find 114 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTCCATTTGAAGTATTTA+AGG | 0.128114 | 3.3:-1379899 | MS.gene058792:intron |
| GCTCCAAAGGTTTCTCCTTC+TGG | 0.189619 | 3.3:+1380271 | None:intergenic |
| TCTGCATTAGTTGGGCGATA+TGG | 0.221007 | 3.3:-1382209 | MS.gene058792:CDS |
| AACAAACTAAAATTCATCTT+TGG | 0.224993 | 3.3:+1379621 | None:intergenic |
| CCTTGGCAAGGAAGGCTTAA+AGG | 0.244002 | 3.3:-1383473 | MS.gene058792:CDS |
| AGAGTTCCGTCTTGGTTAAA+TGG | 0.267555 | 3.3:-1383506 | MS.gene058792:CDS |
| ACCACAAGGTTTAAATGAAT+TGG | 0.278023 | 3.3:+1384328 | None:intergenic |
| CTCACCTGAGTTGCCTTTAT+AGG | 0.288772 | 3.3:+1383344 | None:intergenic |
| GGTTACGATAGTAGGATTTC+AGG | 0.291373 | 3.3:-1382289 | MS.gene058792:intron |
| ACAAACTAAAATTCATCTTT+GGG | 0.293290 | 3.3:+1379622 | None:intergenic |
| ATCCATGGAGCAAGCTATTA+AGG | 0.308600 | 3.3:-1381462 | MS.gene058792:CDS |
| TCCTTAAGTCTATCAACTTC+GGG | 0.308723 | 3.3:+1382254 | None:intergenic |
| AAAAGAGCGGAAATTGTCTT+TGG | 0.330350 | 3.3:-1383531 | MS.gene058792:CDS |
| GGATAATTTGTCAGCTCAAC+TGG | 0.331316 | 3.3:-1383573 | MS.gene058792:CDS |
| TCAGCTAGTGCTGTGGCATT+TGG | 0.337150 | 3.3:-1383044 | MS.gene058792:CDS |
| TAGACTTAAGGAACCTATCT+TGG | 0.351543 | 3.3:-1382243 | MS.gene058792:CDS |
| GCGTTTATTCTAAAGGGTTA+TGG | 0.369605 | 3.3:-1381536 | MS.gene058792:CDS |
| CTGCATTAGTTGGGCGATAT+GGG | 0.371019 | 3.3:-1382208 | MS.gene058792:CDS |
| GGTTTATTTCTTGAAGAGTC+TGG | 0.374217 | 3.3:-1380410 | MS.gene058792:intron |
| AGCCTCCACAGAAAAGAAAA+TGG | 0.377131 | 3.3:-1380239 | MS.gene058792:CDS |
| GTGTATATAGATTACATTGC+TGG | 0.383792 | 3.3:-1381579 | MS.gene058792:intron |
| AATTATACGAACTTGGAATC+AGG | 0.387815 | 3.3:-1383421 | MS.gene058792:CDS |
| TTCAGTGGCAATGGAACTCT+TGG | 0.391689 | 3.3:-1383011 | MS.gene058792:CDS |
| TCCAGACATATATCCTATAA+AGG | 0.391852 | 3.3:-1383357 | MS.gene058792:CDS |
| GAGATTACATCTGCATTAGT+TGG | 0.394671 | 3.3:-1382218 | MS.gene058792:CDS |
| AAATCACTAAATTATAGAAT+GGG | 0.395225 | 3.3:-1381512 | MS.gene058792:CDS |
| GACACCTTAAATACTTCAAA+TGG | 0.399416 | 3.3:+1379895 | None:intergenic |
| GTCCCATTCTCATGTCTGCT+TGG | 0.401122 | 3.3:-1380431 | MS.gene058792:CDS |
| AAGCTTACAGGCATTGGAAT+GGG | 0.405845 | 3.3:+1380102 | None:intergenic |
| TTGGAGGCGTTTATTCTAAA+GGG | 0.408639 | 3.3:-1381542 | MS.gene058792:CDS |
| CTTGGAGGCGTTTATTCTAA+AGG | 0.419192 | 3.3:-1381543 | MS.gene058792:CDS |
| AACATCTCTCCACCGTCTCC+AGG | 0.430519 | 3.3:-1384484 | MS.gene058792:intron |
| TCTCTGGTTCTTATGTAAAC+AGG | 0.431034 | 3.3:-1382156 | MS.gene058792:intron |
| TTCCTTAAGTCTATCAACTT+CGG | 0.436190 | 3.3:+1382253 | None:intergenic |
| CTGTATAGTTGTCCTGCGTC+AGG | 0.438844 | 3.3:-1380171 | MS.gene058792:CDS |
| CTCAACTGGATGTTCTTGTA+AGG | 0.439096 | 3.3:-1383559 | MS.gene058792:CDS |
| GGCAATGGAACTCTTGGAAC+TGG | 0.447948 | 3.3:-1383005 | MS.gene058792:CDS |
| TAAATCACTAAATTATAGAA+TGG | 0.454360 | 3.3:-1381513 | MS.gene058792:CDS |
| CACAGCACTAGCTGATGCTC+GGG | 0.455439 | 3.3:+1383052 | None:intergenic |
| CTACAAAAGCTTACAGGCAT+TGG | 0.460567 | 3.3:+1380096 | None:intergenic |
| GGAAATCTCCTTGGCAAGGA+AGG | 0.464112 | 3.3:-1383481 | MS.gene058792:CDS |
| CTGACGCAGGACAACTATAC+AGG | 0.473699 | 3.3:+1380172 | None:intergenic |
| CTCCGACAAAGAAAAGGATA+AGG | 0.475675 | 3.3:-1383601 | MS.gene058792:CDS |
| AATCCAGAAGGAGAAACCTT+TGG | 0.476956 | 3.3:-1380274 | MS.gene058792:CDS |
| ATCATGCTCCGCGAGGGCTT+CGG | 0.477499 | 3.3:+1379691 | None:intergenic |
| ACCCGAAGTTGATAGACTTA+AGG | 0.479122 | 3.3:-1382255 | MS.gene058792:CDS |
| TTCCGTCTTGGTTAAATGGA+TGG | 0.483104 | 3.3:-1383502 | MS.gene058792:CDS |
| ATAACAGGAAGCATCCTTGT+TGG | 0.485453 | 3.3:-1381989 | MS.gene058792:intron |
| TTGGAATCAGGATTAGAGAA+AGG | 0.488890 | 3.3:-1383409 | MS.gene058792:CDS |
| TAGTGCTGTGGCATTTGGAA+TGG | 0.489961 | 3.3:-1383039 | MS.gene058792:CDS |
| GGCTTTGGAGGTAGCTCCAA+AGG | 0.490471 | 3.3:+1380258 | None:intergenic |
| AGTGCTGTGGCATTTGGAAT+GGG | 0.491271 | 3.3:-1383038 | MS.gene058792:CDS |
| CTCGTTCTCCGACAAAGAAA+AGG | 0.491299 | 3.3:-1383607 | MS.gene058792:CDS |
| CTTTGGAGAGAGTTCCGTCT+TGG | 0.491832 | 3.3:-1383514 | MS.gene058792:CDS |
| AAAGAAAAGGATAAGGGAGT+TGG | 0.492650 | 3.3:-1383594 | MS.gene058792:CDS |
| TATTCACTGCAGGGTTGTCA+TGG | 0.494935 | 3.3:-1379931 | MS.gene058792:intron |
| AGATTACATCTGCATTAGTT+GGG | 0.499233 | 3.3:-1382217 | MS.gene058792:CDS |
| TCCACAGAAAAGAAAATGGC+GGG | 0.499586 | 3.3:-1380235 | MS.gene058792:CDS |
| TCCAATTCATTTAAACCTTG+TGG | 0.499872 | 3.3:-1384329 | MS.gene058792:intron |
| GCCTTTATAGGATATATGTC+TGG | 0.504217 | 3.3:+1383356 | None:intergenic |
| AACCAAGCAGACATGAGAAT+GGG | 0.505960 | 3.3:+1380429 | None:intergenic |
| CAGTTTCTGCATGAGCAAAC+CGG | 0.507648 | 3.3:+1380456 | None:intergenic |
| GGCATATTACATCATCTCTC+TGG | 0.508982 | 3.3:-1382172 | MS.gene058792:CDS |
| TGAAGATGTTGTTCAATCCA+TGG | 0.509427 | 3.3:-1381477 | MS.gene058792:CDS |
| AGCATGTTGTTACCAGCAAA+AGG | 0.511702 | 3.3:+1380198 | None:intergenic |
| GATGTAATCTCATCCAAGAT+AGG | 0.518769 | 3.3:+1382230 | None:intergenic |
| AAACCAAGCAGACATGAGAA+TGG | 0.520129 | 3.3:+1380428 | None:intergenic |
| CCACAGCACTAGCTGATGCT+CGG | 0.526889 | 3.3:+1383051 | None:intergenic |
| GAGGAAGAATTATACGAACT+TGG | 0.526932 | 3.3:-1383428 | MS.gene058792:CDS |
| GGGTTGTCACCTTTCCCTAG+TGG | 0.528747 | 3.3:+1379643 | None:intergenic |
| TGGAATATCATGCTCCGCGA+GGG | 0.537062 | 3.3:+1379685 | None:intergenic |
| CAAGCTATTAAGGCTGAAGA+AGG | 0.544813 | 3.3:-1381452 | MS.gene058792:intron |
| TTCCATCCATTTAACCAAGA+CGG | 0.547637 | 3.3:+1383500 | None:intergenic |
| CCTTTAAGCCTTCCTTGCCA+AGG | 0.550309 | 3.3:+1383473 | None:intergenic |
| TGAACAACATCTTCAAGTAA+TGG | 0.551000 | 3.3:+1381485 | None:intergenic |
| AAATCTCAGCAAGATGTCAC+TGG | 0.554670 | 3.3:+1382944 | None:intergenic |
| TAAATGGATGGAAATCTCCT+TGG | 0.554988 | 3.3:-1383490 | MS.gene058792:CDS |
| ACTACAAAAGTACCTCCAAT+GGG | 0.557015 | 3.3:+1381935 | None:intergenic |
| AAAGCTTACAGGCATTGGAA+TGG | 0.558496 | 3.3:+1380101 | None:intergenic |
| TCCGACAAAGAAAAGGATAA+GGG | 0.559478 | 3.3:-1383600 | MS.gene058792:CDS |
| AGCCTTAATAGCTTGCTCCA+TGG | 0.564475 | 3.3:+1381460 | None:intergenic |
| ATATCCTATAAAGGCAACTC+AGG | 0.566710 | 3.3:-1383348 | MS.gene058792:intron |
| TTGAGAAATGTAAAATCGAA+AGG | 0.568997 | 3.3:+1384540 | None:intergenic |
| GACTACAAAAGTACCTCCAA+TGG | 0.570542 | 3.3:+1381934 | None:intergenic |
| GTTCCTTCTAAAATTCCTCA+AGG | 0.574019 | 3.3:-1384358 | MS.gene058792:CDS |
| TTACATTCCCAGGCAAGGCA+TGG | 0.576004 | 3.3:-1383632 | MS.gene058792:intron |
| TATAGATTACATTGCTGGAG+TGG | 0.578859 | 3.3:-1381574 | MS.gene058792:intron |
| GCTGGAGTGGACAGATGACT+TGG | 0.580590 | 3.3:-1381561 | MS.gene058792:CDS |
| TTATAGGATATATGTCTGGA+TGG | 0.582429 | 3.3:+1383360 | None:intergenic |
| TGATTGTTGTCATAACTACA+AGG | 0.582799 | 3.3:-1382919 | MS.gene058792:intron |
| CAAACTAAAATTCATCTTTG+GGG | 0.598005 | 3.3:+1379623 | None:intergenic |
| GGCGGTGAGCTAATTAAACT+AGG | 0.601575 | 3.3:-1383452 | MS.gene058792:CDS |
| TCAACTGGATGTTCTTGTAA+GGG | 0.604338 | 3.3:-1383558 | MS.gene058792:CDS |
| TGATATTCCAAATATTTCAG+TGG | 0.604907 | 3.3:-1379672 | MS.gene058792:CDS |
| GGATGGAAATCTCCTTGGCA+AGG | 0.610408 | 3.3:-1383485 | MS.gene058792:CDS |
| AATCACTAAATTATAGAATG+GGG | 0.619098 | 3.3:-1381511 | MS.gene058792:CDS |
| AGCAAGAGCCGAAGCCCTCG+CGG | 0.619488 | 3.3:-1379699 | MS.gene058792:CDS |
| GGAGTGGACAGATGACTTGG+AGG | 0.620597 | 3.3:-1381558 | MS.gene058792:CDS |
| AGCTTACAGGCATTGGAATG+GGG | 0.624158 | 3.3:+1380103 | None:intergenic |
| AGAGTTTGACAAAATCCAGA+AGG | 0.633058 | 3.3:-1380286 | MS.gene058792:CDS |
| CCGAGCATCAGCTAGTGCTG+TGG | 0.634420 | 3.3:-1383051 | MS.gene058792:CDS |
| TAATCCTCGTCAAACAAACT+CGG | 0.636648 | 3.3:+1383383 | None:intergenic |
| CTCCACAGAAAAGAAAATGG+CGG | 0.637496 | 3.3:-1380236 | MS.gene058792:CDS |
| TGAGCTAATTAAACTAGGAG+AGG | 0.639606 | 3.3:-1383447 | MS.gene058792:CDS |
| ACAGCACTAGCTGATGCTCG+GGG | 0.659608 | 3.3:+1383053 | None:intergenic |
| GTTTCCGAGTTTGTTTGACG+AGG | 0.659643 | 3.3:-1383387 | MS.gene058792:CDS |
| TGAATTGGAGTACATCCTTG+AGG | 0.660520 | 3.3:+1384343 | None:intergenic |
| TTGGAATATCATGCTCCGCG+AGG | 0.669168 | 3.3:+1379684 | None:intergenic |
| CCACAGAAAAGAAAATGGCG+GGG | 0.671932 | 3.3:-1380234 | MS.gene058792:CDS |
| TCATAGTCATGCTTCTGATG+AGG | 0.679963 | 3.3:+1379739 | None:intergenic |
| TTGTAAGGGATGTAAAAGAG+CGG | 0.687987 | 3.3:-1383544 | MS.gene058792:CDS |
| AAAATGGCGGGGTAGCAGTG+TGG | 0.701485 | 3.3:-1380223 | MS.gene058792:CDS |
| TTGATCAGTTATATCCAACA+AGG | 0.711218 | 3.3:+1381975 | None:intergenic |
| TGGCAAGGAAGGCTTAAAGG+CGG | 0.730530 | 3.3:-1383470 | MS.gene058792:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATATAACCATAAAAA+AGG | + | chr3.3:1381895-1381914 | None:intergenic | 10.0% |
| !! | AATAAAATTTAAAAAATGTC+AGG | - | chr3.3:1382350-1382369 | MS.gene058792:intron | 10.0% |
| !! | TAATTAATTATGAAATATGT+TGG | - | chr3.3:1379941-1379960 | MS.gene058792:intron | 10.0% |
| !! | TATTTAAATAATATTTACAG+AGG | + | chr3.3:1382334-1382353 | None:intergenic | 10.0% |
| !! | AAAGAAACTAAATTAGTAAA+AGG | - | chr3.3:1382443-1382462 | MS.gene058792:intron | 15.0% |
| !! | AAAGAAGATTAAAATCAATA+TGG | + | chr3.3:1383297-1383316 | None:intergenic | 15.0% |
| !! | AAATCACTAAATTATAGAAT+GGG | - | chr3.3:1382696-1382715 | MS.gene058792:intron | 15.0% |
| !! | AACATACATAAAATATAAGT+GGG | + | chr3.3:1380411-1380430 | None:intergenic | 15.0% |
| !! | AAGAAACTAAATTAGTAAAA+GGG | - | chr3.3:1382444-1382463 | MS.gene058792:intron | 15.0% |
| !! | GCAAATATGTATATAAATAT+AGG | + | chr3.3:1382824-1382843 | None:intergenic | 15.0% |
| !! | TAAATCACTAAATTATAGAA+TGG | - | chr3.3:1382695-1382714 | MS.gene058792:intron | 15.0% |
| !! | TAATCTATATACACATAATT+TGG | + | chr3.3:1382623-1382642 | None:intergenic | 15.0% |
| !! | TTATGGTTATATAATTTCTT+TGG | - | chr3.3:1381898-1381917 | MS.gene058792:intron | 15.0% |
| !!! | ATGTTGGTTATATATATAAT+AGG | - | chr3.3:1379957-1379976 | MS.gene058792:intron | 15.0% |
| !!! | TATTGATAGTTTAAACTATT+GGG | - | chr3.3:1380498-1380517 | MS.gene058792:intron | 15.0% |
| !!! | TATTTTATTTGTATTCCTTT+TGG | - | chr3.3:1383362-1383381 | MS.gene058792:CDS | 15.0% |
| !!! | TTATTGATAGTTTAAACTAT+TGG | - | chr3.3:1380497-1380516 | MS.gene058792:intron | 15.0% |
| !!! | TTCTCATTGTTTTAATTTAA+TGG | - | chr3.3:1383515-1383534 | MS.gene058792:CDS | 15.0% |
| !!! | TTTAGCATTTTTTAATATTG+AGG | - | chr3.3:1382782-1382801 | MS.gene058792:intron | 15.0% |
| !! | AACAATAACTTATATGCATT+TGG | + | chr3.3:1382487-1382506 | None:intergenic | 20.0% |
| !! | AACTATCAATAATAACAAGT+TGG | + | chr3.3:1380489-1380508 | None:intergenic | 20.0% |
| !! | AATCACTAAATTATAGAATG+GGG | - | chr3.3:1382697-1382716 | MS.gene058792:intron | 20.0% |
| !! | AATTCCAGTTAGTATATAAT+TGG | - | chr3.3:1383491-1383510 | MS.gene058792:CDS | 20.0% |
| !! | AATTTGTGATGATTTATAAC+AGG | - | chr3.3:1382204-1382223 | MS.gene058792:CDS | 20.0% |
| !! | AGAAACTAAATTAGTAAAAG+GGG | - | chr3.3:1382445-1382464 | MS.gene058792:intron | 20.0% |
| !! | ATATAATCATTTCAAAGTGT+TGG | + | chr3.3:1380051-1380070 | None:intergenic | 20.0% |
| !! | CAACATACATAAAATATAAG+TGG | + | chr3.3:1380412-1380431 | None:intergenic | 20.0% |
| !! | GAATAAAATTTATCACTGAA+AGG | + | chr3.3:1381547-1381566 | None:intergenic | 20.0% |
| !! | GACACTAATATTTATGAAAT+TGG | + | chr3.3:1381412-1381431 | None:intergenic | 20.0% |
| !! | GTAATATTAATTCTCCATAA+CGG | + | chr3.3:1383600-1383619 | None:intergenic | 20.0% |
| !! | TAAGTTTCAGAAATATCAAA+CGG | + | chr3.3:1381107-1381126 | None:intergenic | 20.0% |
| !! | TAATATTAATTCTCCATAAC+GGG | + | chr3.3:1383599-1383618 | None:intergenic | 20.0% |
| !! | TGTTATAAATCATCACAAAT+TGG | + | chr3.3:1382205-1382224 | None:intergenic | 20.0% |
| !! | TTTCATGCTTTATAAGAAAA+TGG | - | chr3.3:1383270-1383289 | MS.gene058792:intron | 20.0% |
| !!! | AACTATGCATTTTTTAATAG+CGG | - | chr3.3:1383405-1383424 | MS.gene058792:CDS | 20.0% |
| !!! | TATATTTTATGTATGTTGCT+TGG | - | chr3.3:1380414-1380433 | MS.gene058792:CDS | 20.0% |
| !!! | TTAAGAAGCATATTTACAAA+TGG | + | chr3.3:1381434-1381453 | None:intergenic | 20.0% |
| ! | AATATGAAGTGTGTTTAAAG+AGG | - | chr3.3:1381763-1381782 | MS.gene058792:intron | 25.0% |
| ! | ACAACCTTTATTGATGTTTA+TGG | - | chr3.3:1383565-1383584 | MS.gene058792:CDS | 25.0% |
| ! | ATAAAAACCTGTCATGTATT+AGG | + | chr3.3:1380312-1380331 | None:intergenic | 25.0% |
| ! | CAACCTTTATTGATGTTTAT+GGG | - | chr3.3:1383566-1383585 | MS.gene058792:CDS | 25.0% |
| ! | CATTACATTAGTGACAAATA+TGG | + | chr3.3:1381652-1381671 | None:intergenic | 25.0% |
| ! | TAAAAGAAGAAAAGAACACA+GGG | + | chr3.3:1382115-1382134 | None:intergenic | 25.0% |
| ! | TACATCTATGTTCTAACTAT+TGG | + | chr3.3:1380245-1380264 | None:intergenic | 25.0% |
| ! | TATATACATATTTGCTCTTC+AGG | - | chr3.3:1382829-1382848 | MS.gene058792:intron | 25.0% |
| ! | TATGTTAAATCTCCATCAAA+CGG | + | chr3.3:1381615-1381634 | None:intergenic | 25.0% |
| ! | TATTTGTCACTAATGTAATG+AGG | - | chr3.3:1381652-1381671 | MS.gene058792:intron | 25.0% |
| ! | TGATATTCCAAATATTTCAG+TGG | - | chr3.3:1384536-1384555 | MS.gene058792:CDS | 25.0% |
| ! | TGCATAGTTCAAGAAAATAT+AGG | + | chr3.3:1383394-1383413 | None:intergenic | 25.0% |
| ! | TGTAATCAGTTATCATATCA+AGG | + | chr3.3:1382424-1382443 | None:intergenic | 25.0% |
| ! | TTAAAAGAAGAAAAGAACAC+AGG | + | chr3.3:1382116-1382135 | None:intergenic | 25.0% |
| ! | TTACTAACTACTAACTTTAG+AGG | + | chr3.3:1382910-1382929 | None:intergenic | 25.0% |
| ! | TTATTGTGAATAGCTGAATT+TGG | - | chr3.3:1384177-1384196 | MS.gene058792:intron | 25.0% |
| ! | TTGAGAAATGTAAAATCGAA+AGG | + | chr3.3:1379671-1379690 | None:intergenic | 25.0% |
| !! | AAAGACTATTTTCACAAAGT+GGG | + | chr3.3:1380361-1380380 | None:intergenic | 25.0% |
| !! | ATTTTATGCAGTTGAAATGA+AGG | - | chr3.3:1380443-1380462 | MS.gene058792:CDS | 25.0% |
| !! | GTAATTTTCTCAACAATTGA+AGG | - | chr3.3:1379901-1379920 | MS.gene058792:CDS | 25.0% |
| !! | TAATACATGACAGGTTTTTA+TGG | - | chr3.3:1380311-1380330 | MS.gene058792:intron | 25.0% |
| !! | TGATTGTTAATTTTCTTCGT+AGG | - | chr3.3:1379791-1379810 | MS.gene058792:intron | 25.0% |
| !! | TTTTATGCAGTTGAAATGAA+GGG | - | chr3.3:1380444-1380463 | MS.gene058792:CDS | 25.0% |
| !! | TTTTATTCCATTTTGCTAGA+AGG | - | chr3.3:1381559-1381578 | MS.gene058792:CDS | 25.0% |
| !!! | ACTAATATTTTTTGAGGAGT+CGG | - | chr3.3:1380961-1380980 | MS.gene058792:intron | 25.0% |
| !!! | ATTATTTTGTGCAAAAGAGT+GGG | + | chr3.3:1384347-1384366 | None:intergenic | 25.0% |
| !!! | ATTGGCACTAATATTTTTTG+AGG | - | chr3.3:1380955-1380974 | MS.gene058792:intron | 25.0% |
| !!! | GATTTGCTCTTTTGAATTTT+TGG | - | chr3.3:1380914-1380933 | MS.gene058792:intron | 25.0% |
| !!! | TTATTTCTGGACCTTTTTTA+TGG | - | chr3.3:1381881-1381900 | MS.gene058792:intron | 25.0% |
| AAAAAATGGAAATGAGCCAA+AGG | + | chr3.3:1383681-1383700 | None:intergenic | 30.0% | |
| AAGTGAATTACTCACTTTAG+AGG | - | chr3.3:1383044-1383063 | MS.gene058792:CDS | 30.0% | |
| AATTATACGAACTTGGAATC+AGG | - | chr3.3:1380787-1380806 | MS.gene058792:intron | 30.0% | |
| AATTATCATACTCTTCCGTT+TGG | + | chr3.3:1380544-1380563 | None:intergenic | 30.0% | |
| ACCACAAGGTTTAAATGAAT+TGG | + | chr3.3:1379883-1379902 | None:intergenic | 30.0% | |
| ACTTCATATTCAACCAATGA+AGG | + | chr3.3:1381753-1381772 | None:intergenic | 30.0% | |
| AGATTACATCTGCATTAGTT+GGG | - | chr3.3:1381991-1382010 | MS.gene058792:intron | 30.0% | |
| ATAATCAATTACTAGTGTCG+TGG | - | chr3.3:1382144-1382163 | MS.gene058792:intron | 30.0% | |
| ATCATCACAAATTGGACAAT+TGG | + | chr3.3:1382197-1382216 | None:intergenic | 30.0% | |
| ATCATTGTGCAGGATTAATT+TGG | - | chr3.3:1384381-1384400 | MS.gene058792:CDS | 30.0% | |
| ATTTCTTTGGTTACGATAGT+AGG | - | chr3.3:1381911-1381930 | MS.gene058792:intron | 30.0% | |
| CAACCCATAAACATCAATAA+AGG | + | chr3.3:1383572-1383591 | None:intergenic | 30.0% | |
| CAGTTTGATCAAACTAGTAA+AGG | + | chr3.3:1383147-1383166 | None:intergenic | 30.0% | |
| CCAAAGATAAACCATAAAAC+TGG | + | chr3.3:1380288-1380307 | None:intergenic | 30.0% | |
| CTACAGGAGCAATAAAAAAA+TGG | + | chr3.3:1383695-1383714 | None:intergenic | 30.0% | |
| CTAGAAGGAAAAAATGAAGA+TGG | + | chr3.3:1380891-1380910 | None:intergenic | 30.0% | |
| GAAAAAGCCACTGAAATATT+TGG | + | chr3.3:1384546-1384565 | None:intergenic | 30.0% | |
| GAACATGACGACTTTAATAT+AGG | + | chr3.3:1382861-1382880 | None:intergenic | 30.0% | |
| GAAGCCAATTATATACTAAC+TGG | + | chr3.3:1383498-1383517 | None:intergenic | 30.0% | |
| GACACCTTAAATACTTCAAA+TGG | + | chr3.3:1384316-1384335 | None:intergenic | 30.0% | |
| GCAAAATTGTGATAGAATGT+TGG | + | chr3.3:1379755-1379774 | None:intergenic | 30.0% | |
| GCTATTCACAATAAAACCAT+TGG | + | chr3.3:1384171-1384190 | None:intergenic | 30.0% | |
| GTGTATATAGATTACATTGC+TGG | - | chr3.3:1382629-1382648 | MS.gene058792:intron | 30.0% | |
| TAATGTTGTAGAGACATTGT+TGG | - | chr3.3:1381312-1381331 | MS.gene058792:intron | 30.0% | |
| TAGTGTCTGTAGTTTATTTC+TGG | - | chr3.3:1381868-1381887 | MS.gene058792:intron | 30.0% | |
| TATATGACAATGTGAACCTT+TGG | - | chr3.3:1383662-1383681 | MS.gene058792:intron | 30.0% | |
| TCCAATTCATTTAAACCTTG+TGG | - | chr3.3:1379879-1379898 | MS.gene058792:intron | 30.0% | |
| TCCAGACATATATCCTATAA+AGG | - | chr3.3:1380851-1380870 | MS.gene058792:intron | 30.0% | |
| TCTTGAGTTACTTACTTGTT+TGG | - | chr3.3:1380071-1380090 | MS.gene058792:intron | 30.0% | |
| TGAACAACATCTTCAAGTAA+TGG | + | chr3.3:1382726-1382745 | None:intergenic | 30.0% | |
| TGATGTGATATGTGATCAAA+TGG | - | chr3.3:1382298-1382317 | MS.gene058792:intron | 30.0% | |
| TGATTGTTGTCATAACTACA+AGG | - | chr3.3:1381289-1381308 | MS.gene058792:intron | 30.0% | |
| TTATAGGATATATGTCTGGA+TGG | + | chr3.3:1380851-1380870 | None:intergenic | 30.0% | |
| TTATCTTGATGCATGTCAAT+TGG | - | chr3.3:1380937-1380956 | MS.gene058792:intron | 30.0% | |
| TTCCTTAAGTCTATCAACTT+CGG | + | chr3.3:1381958-1381977 | None:intergenic | 30.0% | |
| TTGATCAGTTATATCCAACA+AGG | + | chr3.3:1382236-1382255 | None:intergenic | 30.0% | |
| TTGTTGAGAAAATTACCACA+AGG | + | chr3.3:1379897-1379916 | None:intergenic | 30.0% | |
| TTTATCACTGAAAGGAACAT+AGG | + | chr3.3:1381539-1381558 | None:intergenic | 30.0% | |
| ! | AAATATAGGCTTTAGCCAAA+AGG | + | chr3.3:1383380-1383399 | None:intergenic | 30.0% |
| ! | ATTGGACATTTTGTGATCTT+CGG | - | chr3.3:1381833-1381852 | MS.gene058792:intron | 30.0% |
| ! | CAAAGACTATTTTCACAAAG+TGG | + | chr3.3:1380362-1380381 | None:intergenic | 30.0% |
| ! | CTGTCCATTTGAAGTATTTA+AGG | - | chr3.3:1384309-1384328 | MS.gene058792:intron | 30.0% |
| ! | GTTAATTTTCTTCGTAGGTA+CGG | - | chr3.3:1379796-1379815 | MS.gene058792:intron | 30.0% |
| ! | TCATTTTCTGCTTACAGTTT+AGG | + | chr3.3:1380110-1380129 | None:intergenic | 30.0% |
| !! | ATGTCAGAGTTATTTTCCAA+TGG | - | chr3.3:1384152-1384171 | MS.gene058792:intron | 30.0% |
| !! | CCAGTTTTATGGTTTATCTT+TGG | - | chr3.3:1380285-1380304 | MS.gene058792:CDS | 30.0% |
| !! | GATATGGGTTGAATTTTACA+AGG | - | chr3.3:1382015-1382034 | MS.gene058792:intron | 30.0% |
| !! | GATTATTTTGTGCAAAAGAG+TGG | + | chr3.3:1384348-1384367 | None:intergenic | 30.0% |
| !! | TTAGCTCTATTGATGTGAAT+TGG | - | chr3.3:1381815-1381834 | MS.gene058792:intron | 30.0% |
| !! | TTATTTTGTGCAAAAGAGTG+GGG | + | chr3.3:1384346-1384365 | None:intergenic | 30.0% |
| !!! | CATCTTCATTTTTTCCTTCT+AGG | - | chr3.3:1380889-1380908 | MS.gene058792:intron | 30.0% |
| !!! | CTAATATTTTTTGAGGAGTC+GGG | - | chr3.3:1380962-1380981 | MS.gene058792:intron | 30.0% |
| !!! | TGGTTTTATTGCAAAGTAGT+GGG | - | chr3.3:1383869-1383888 | MS.gene058792:intron | 30.0% |
| !!! | TTGGTTTTATTGCAAAGTAG+TGG | - | chr3.3:1383868-1383887 | MS.gene058792:intron | 30.0% |
| AAAAGAGCGGAAATTGTCTT+TGG | - | chr3.3:1380677-1380696 | MS.gene058792:intron | 35.0% | |
| AAAGAAAAGGATAAGGGAGT+TGG | - | chr3.3:1380614-1380633 | MS.gene058792:intron | 35.0% | |
| AAAGAGCAAATCTACCTAGA+AGG | + | chr3.3:1380906-1380925 | None:intergenic | 35.0% | |
| ACTTATGCATCTCTCTTATC+TGG | - | chr3.3:1381122-1381141 | MS.gene058792:intron | 35.0% | |
| AGAACACAGGGAAAATCAAA+AGG | + | chr3.3:1382103-1382122 | None:intergenic | 35.0% | |
| AGAGTTTGACAAAATCCAGA+AGG | - | chr3.3:1383922-1383941 | MS.gene058792:intron | 35.0% | |
| ATATCCTATAAAGGCAACTC+AGG | - | chr3.3:1380860-1380879 | MS.gene058792:intron | 35.0% | |
| ATCTCTCTTATCTGGCAAAT+AGG | - | chr3.3:1381130-1381149 | MS.gene058792:intron | 35.0% | |
| CAAGAACTACAAAAGCTTAC+AGG | + | chr3.3:1384121-1384140 | None:intergenic | 35.0% | |
| CATGCATAACAACTCATTAG+TGG | + | chr3.3:1382962-1382981 | None:intergenic | 35.0% | |
| CTTGTGTTAATAGAGGATGT+CGG | - | chr3.3:1380184-1380203 | MS.gene058792:CDS | 35.0% | |
| GAGATTACATCTGCATTAGT+TGG | - | chr3.3:1381990-1382009 | MS.gene058792:intron | 35.0% | |
| GAGGAAGAATTATACGAACT+TGG | - | chr3.3:1380780-1380799 | MS.gene058792:intron | 35.0% | |
| GATAGAATGTTGGAAAAACC+TGG | + | chr3.3:1379745-1379764 | None:intergenic | 35.0% | |
| GATGTAATCTCATCCAAGAT+AGG | + | chr3.3:1381981-1382000 | None:intergenic | 35.0% | |
| GATGTAGAGCAAGATTAAGA+AGG | - | chr3.3:1380259-1380278 | MS.gene058792:CDS | 35.0% | |
| GCACAAAATAATCATTGTGC+AGG | - | chr3.3:1384355-1384374 | MS.gene058792:CDS | 35.0% | |
| GCCTTTATAGGATATATGTC+TGG | + | chr3.3:1380855-1380874 | None:intergenic | 35.0% | |
| GTAGGATTTCAGGAAAAAGA+AGG | - | chr3.3:1381929-1381948 | MS.gene058792:intron | 35.0% | |
| GTGATCTTCGGTATTCTTAT+AGG | - | chr3.3:1381845-1381864 | MS.gene058792:intron | 35.0% | |
| GTTTGCATTGCTAATGCAAA+TGG | - | chr3.3:1380012-1380031 | MS.gene058792:intron | 35.0% | |
| TAAATGGATGGAAATCTCCT+TGG | - | chr3.3:1380718-1380737 | MS.gene058792:intron | 35.0% | |
| TAATCCTCGTCAAACAAACT+CGG | + | chr3.3:1380828-1380847 | None:intergenic | 35.0% | |
| TAATGTAATGAGGCCTTCAT+TGG | - | chr3.3:1381662-1381681 | MS.gene058792:intron | 35.0% | |
| TAGACTTAAGGAACCTATCT+TGG | - | chr3.3:1381965-1381984 | MS.gene058792:CDS | 35.0% | |
| TAGCTCTCTCACATATAAAC+AGG | - | chr3.3:1382532-1382551 | MS.gene058792:intron | 35.0% | |
| TATAGATTACATTGCTGGAG+TGG | - | chr3.3:1382634-1382653 | MS.gene058792:intron | 35.0% | |
| TATCAGAAATCCTCTTGTCT+GGG | + | chr3.3:1381341-1381360 | None:intergenic | 35.0% | |
| TCAACTGGATGTTCTTGTAA+GGG | - | chr3.3:1380650-1380669 | MS.gene058792:intron | 35.0% | |
| TCCGACAAAGAAAAGGATAA+GGG | - | chr3.3:1380608-1380627 | MS.gene058792:intron | 35.0% | |
| TCCTTAAGTCTATCAACTTC+GGG | + | chr3.3:1381957-1381976 | None:intergenic | 35.0% | |
| TGAAGATGTTGTTCAATCCA+TGG | - | chr3.3:1382731-1382750 | MS.gene058792:intron | 35.0% | |
| TGAGCTAATTAAACTAGGAG+AGG | - | chr3.3:1380761-1380780 | MS.gene058792:intron | 35.0% | |
| TGTTGTGATATGCTAACTGT+TGG | - | chr3.3:1383333-1383352 | MS.gene058792:intron | 35.0% | |
| TTCCATCCATTTAACCAAGA+CGG | + | chr3.3:1380711-1380730 | None:intergenic | 35.0% | |
| TTGGAATCAGGATTAGAGAA+AGG | - | chr3.3:1380799-1380818 | MS.gene058792:intron | 35.0% | |
| TTGTAAGGGATGTAAAAGAG+CGG | - | chr3.3:1380664-1380683 | MS.gene058792:intron | 35.0% | |
| TTGTGTTAATAGAGGATGTC+GGG | - | chr3.3:1380185-1380204 | MS.gene058792:CDS | 35.0% | |
| ! | CAATATTTTCCCAGCAGAAA+AGG | + | chr3.3:1381504-1381523 | None:intergenic | 35.0% |
| ! | CATCCTTGAGGAATTTTAGA+AGG | + | chr3.3:1379856-1379875 | None:intergenic | 35.0% |
| ! | GCGTTTATTCTAAAGGGTTA+TGG | - | chr3.3:1382672-1382691 | MS.gene058792:intron | 35.0% |
| ! | GGTTTATTTCTTGAAGAGTC+TGG | - | chr3.3:1383798-1383817 | MS.gene058792:intron | 35.0% |
| ! | TAAGAAGGATGCCAGTTTTA+TGG | - | chr3.3:1380274-1380293 | MS.gene058792:CDS | 35.0% |
| ! | TCCCTTATCCTTTTCTTTGT+CGG | + | chr3.3:1380612-1380631 | None:intergenic | 35.0% |
| ! | TTCATGTCTCAATTTTGCAG+CGG | + | chr3.3:1381080-1381099 | None:intergenic | 35.0% |
| ! | TTTCTGTGATTTTTCTCCAC+AGG | - | chr3.3:1384432-1384451 | MS.gene058792:intron | 35.0% |
| !! | ACTACAAAAGTACCTCCAAT+GGG | + | chr3.3:1382276-1382295 | None:intergenic | 35.0% |
| !! | GTTCCTTCTAAAATTCCTCA+AGG | - | chr3.3:1379850-1379869 | MS.gene058792:intron | 35.0% |
| !! | TCTCTGGTTCTTATGTAAAC+AGG | - | chr3.3:1382052-1382071 | MS.gene058792:intron | 35.0% |
| !! | TTGGAGGCGTTTATTCTAAA+GGG | - | chr3.3:1382666-1382685 | MS.gene058792:intron | 35.0% |
| !!! | ATGATTTGTTCTCCTTTTGG+AGG | - | chr3.3:1383627-1383646 | MS.gene058792:intron | 35.0% |
| AAACCAAGCAGACATGAGAA+TGG | + | chr3.3:1383783-1383802 | None:intergenic | 40.0% | |
| AAATCTCAGCAAGATGTCAC+TGG | + | chr3.3:1381267-1381286 | None:intergenic | 40.0% | |
| AACCAAGCAGACATGAGAAT+GGG | + | chr3.3:1383782-1383801 | None:intergenic | 40.0% | |
| AATCCAGAAGGAGAAACCTT+TGG | - | chr3.3:1383934-1383953 | MS.gene058792:intron | 40.0% | |
| AGAGTTCCGTCTTGGTTAAA+TGG | - | chr3.3:1380702-1380721 | MS.gene058792:intron | 40.0% | |
| AGCATGTTGTTACCAGCAAA+AGG | + | chr3.3:1384013-1384032 | None:intergenic | 40.0% | |
| AGCCTCCACAGAAAAGAAAA+TGG | - | chr3.3:1383969-1383988 | MS.gene058792:intron | 40.0% | |
| AGGGAAAATCAAAAGGAGCT+GGG | + | chr3.3:1382096-1382115 | None:intergenic | 40.0% | |
| ATCCATGGAGCAAGCTATTA+AGG | - | chr3.3:1382746-1382765 | MS.gene058792:intron | 40.0% | |
| ATGTTGGAAAAACCTGGAGA+CGG | + | chr3.3:1379739-1379758 | None:intergenic | 40.0% | |
| ATTTCTTGAAGAGTCTGGTG+AGG | - | chr3.3:1383803-1383822 | MS.gene058792:intron | 40.0% | |
| CAAGCTATTAAGGCTGAAGA+AGG | - | chr3.3:1382756-1382775 | MS.gene058792:intron | 40.0% | |
| CAGCACCATGCATATTTCAA+GGG | + | chr3.3:1383080-1383099 | None:intergenic | 40.0% | |
| CAGGTTCTGTGTTGAACTTA+TGG | - | chr3.3:1382551-1382570 | MS.gene058792:intron | 40.0% | |
| CATCACAACTCAACCAATGA+AGG | + | chr3.3:1381678-1381697 | None:intergenic | 40.0% | |
| CCTGTAGAAAAACATGTTCC+TGG | - | chr3.3:1383708-1383727 | MS.gene058792:intron | 40.0% | |
| CTACAAAAGCTTACAGGCAT+TGG | + | chr3.3:1384115-1384134 | None:intergenic | 40.0% | |
| CTCAACTGGATGTTCTTGTA+AGG | - | chr3.3:1380649-1380668 | MS.gene058792:intron | 40.0% | |
| CTCCACAGAAAAGAAAATGG+CGG | - | chr3.3:1383972-1383991 | MS.gene058792:intron | 40.0% | |
| CTCCGACAAAGAAAAGGATA+AGG | - | chr3.3:1380607-1380626 | MS.gene058792:intron | 40.0% | |
| CTTGTCCCTTGAAATATGCA+TGG | - | chr3.3:1383072-1383091 | MS.gene058792:intron | 40.0% | |
| CTTTGGACCTAATACATGAC+AGG | - | chr3.3:1380302-1380321 | MS.gene058792:intron | 40.0% | |
| GCGGCACTTCAATTTAATCA+TGG | + | chr3.3:1381061-1381080 | None:intergenic | 40.0% | |
| GGCATATTACATCATCTCTC+TGG | - | chr3.3:1382036-1382055 | MS.gene058792:intron | 40.0% | |
| GGGAAAATATTGAAGACCGT+GGG | - | chr3.3:1381512-1381531 | MS.gene058792:CDS | 40.0% | |
| GGTTACGATAGTAGGATTTC+AGG | - | chr3.3:1381919-1381938 | MS.gene058792:intron | 40.0% | |
| GTATCAGAAATCCTCTTGTC+TGG | + | chr3.3:1381342-1381361 | None:intergenic | 40.0% | |
| TAGTGCTATGTTACATTCCC+AGG | - | chr3.3:1380566-1380585 | MS.gene058792:intron | 40.0% | |
| TCATAGTCATGCTTCTGATG+AGG | + | chr3.3:1384472-1384491 | None:intergenic | 40.0% | |
| TCCACAGAAAAGAAAATGGC+GGG | - | chr3.3:1383973-1383992 | MS.gene058792:intron | 40.0% | |
| TCTATTAACACAAGTCAGCG+AGG | + | chr3.3:1380178-1380197 | None:intergenic | 40.0% | |
| TGAATTGGAGTACATCCTTG+AGG | + | chr3.3:1379868-1379887 | None:intergenic | 40.0% | |
| TGCAAGATACAACCTCCAAA+AGG | + | chr3.3:1383642-1383661 | None:intergenic | 40.0% | |
| TGGGAAAATATTGAAGACCG+TGG | - | chr3.3:1381511-1381530 | MS.gene058792:CDS | 40.0% | |
| TTAATAGAGGATGTCGGGTT+TGG | - | chr3.3:1380190-1380209 | MS.gene058792:CDS | 40.0% | |
| TTCCGTCTTGGTTAAATGGA+TGG | - | chr3.3:1380706-1380725 | MS.gene058792:intron | 40.0% | |
| ! | CCAGGAACATGTTTTTCTAC+AGG | + | chr3.3:1383711-1383730 | None:intergenic | 40.0% |
| ! | CTTCATTGGTTGAGTTGTGA+TGG | - | chr3.3:1381676-1381695 | MS.gene058792:intron | 40.0% |
| ! | GGATAATTTGTCAGCTCAAC+TGG | - | chr3.3:1380635-1380654 | MS.gene058792:intron | 40.0% |
| ! | TATGGGTTGAAATCCCGTTA+TGG | - | chr3.3:1383583-1383602 | MS.gene058792:CDS | 40.0% |
| ! | TATTTTCCCAGCAGAAAAGG+TGG | + | chr3.3:1381501-1381520 | None:intergenic | 40.0% |
| ! | TCGTTGTGTTATTCACTGCA+GGG | - | chr3.3:1384268-1384287 | MS.gene058792:intron | 40.0% |
| ! | TTCGTTGTGTTATTCACTGC+AGG | - | chr3.3:1384267-1384286 | MS.gene058792:intron | 40.0% |
| ! | TTTCTTTTCTGTGGAGGCTT+TGG | + | chr3.3:1383968-1383987 | None:intergenic | 40.0% |
| !! | AAAGCTTACAGGCATTGGAA+TGG | + | chr3.3:1384110-1384129 | None:intergenic | 40.0% |
| !! | AAGCTTACAGGCATTGGAAT+GGG | + | chr3.3:1384109-1384128 | None:intergenic | 40.0% |
| !! | ACCCGAAGTTGATAGACTTA+AGG | - | chr3.3:1381953-1381972 | MS.gene058792:CDS | 40.0% |
| !! | ATAACAGGAAGCATCCTTGT+TGG | - | chr3.3:1382219-1382238 | MS.gene058792:CDS | 40.0% |
| !! | CTTGGAGGCGTTTATTCTAA+AGG | - | chr3.3:1382665-1382684 | MS.gene058792:intron | 40.0% |
| !! | GAAAGCACCTTCTAGCAAAA+TGG | + | chr3.3:1381569-1381588 | None:intergenic | 40.0% |
| !! | GACTACAAAAGTACCTCCAA+TGG | + | chr3.3:1382277-1382296 | None:intergenic | 40.0% |
| !! | GCTTTGAAAAAGCAAGACTC+CGG | - | chr3.3:1383733-1383752 | MS.gene058792:intron | 40.0% |
| !! | TCGCTGACTTGTGTTAATAG+AGG | - | chr3.3:1380177-1380196 | MS.gene058792:CDS | 40.0% |
| !! | TGGCATTGATTGATCAATGC+AGG | - | chr3.3:1380331-1380350 | MS.gene058792:intron | 40.0% |
| !! | TTCAGTGGCTTTTTCCACTA+GGG | - | chr3.3:1384551-1384570 | MS.gene058792:CDS | 40.0% |
| !! | TTTCAGTGGCTTTTTCCACT+AGG | - | chr3.3:1384550-1384569 | MS.gene058792:CDS | 40.0% |
| !! | TTTGGAATGGGTCTTTTCAG+TGG | - | chr3.3:1381182-1381201 | MS.gene058792:intron | 40.0% |
| !!! | GGTGCAACTATTTTTTCCTG+TGG | + | chr3.3:1384451-1384470 | None:intergenic | 40.0% |
| CAGGGAAAATCAAAAGGAGC+TGG | + | chr3.3:1382097-1382116 | None:intergenic | 45.0% | |
| CAGTTTCTGCATGAGCAAAC+CGG | + | chr3.3:1383755-1383774 | None:intergenic | 45.0% | |
| CCACAGAAAAGAAAATGGCG+GGG | - | chr3.3:1383974-1383993 | MS.gene058792:intron | 45.0% | |
| CCAGCACCATGCATATTTCA+AGG | + | chr3.3:1383081-1383100 | None:intergenic | 45.0% | |
| CCTTGAAATATGCATGGTGC+TGG | - | chr3.3:1383078-1383097 | MS.gene058792:intron | 45.0% | |
| CTATGTTACATTCCCAGGCA+AGG | - | chr3.3:1380571-1380590 | MS.gene058792:intron | 45.0% | |
| CTCACCTGAGTTGCCTTTAT+AGG | + | chr3.3:1380867-1380886 | None:intergenic | 45.0% | |
| CTCGTTCTCCGACAAAGAAA+AGG | - | chr3.3:1380601-1380620 | MS.gene058792:intron | 45.0% | |
| CTGCATTAGTTGGGCGATAT+GGG | - | chr3.3:1382000-1382019 | MS.gene058792:intron | 45.0% | |
| GAGGAGTCAAGTTCGTCTTA+AGG | + | chr3.3:1382891-1382910 | None:intergenic | 45.0% | |
| GGCGGTGAGCTAATTAAACT+AGG | - | chr3.3:1380756-1380775 | MS.gene058792:intron | 45.0% | |
| GTGCAGGATAATCATTGTGC+AGG | - | chr3.3:1384371-1384390 | MS.gene058792:CDS | 45.0% | |
| TAGTGCTGTGGCATTTGGAA+TGG | - | chr3.3:1381169-1381188 | MS.gene058792:intron | 45.0% | |
| TATTCACTGCAGGGTTGTCA+TGG | - | chr3.3:1384277-1384296 | MS.gene058792:intron | 45.0% | |
| TCTGCATTAGTTGGGCGATA+TGG | - | chr3.3:1381999-1382018 | MS.gene058792:intron | 45.0% | |
| TGAAAGGAACATAGGACCCA+CGG | + | chr3.3:1381531-1381550 | None:intergenic | 45.0% | |
| TTCAGTGGCAATGGAACTCT+TGG | - | chr3.3:1381197-1381216 | MS.gene058792:intron | 45.0% | |
| ! | AGTGCTGTGGCATTTGGAAT+GGG | - | chr3.3:1381170-1381189 | MS.gene058792:intron | 45.0% |
| ! | ATGGGTCTTTTCAGTGGCAA+TGG | - | chr3.3:1381188-1381207 | MS.gene058792:intron | 45.0% |
| ! | CGAGCATGTTTTATCCCCTT+TGG | + | chr3.3:1381006-1381025 | None:intergenic | 45.0% |
| ! | GTGTAGTCTTTTCAGCCCAT+TGG | - | chr3.3:1382258-1382277 | MS.gene058792:CDS | 45.0% |
| ! | GTTTCCGAGTTTGTTTGACG+AGG | - | chr3.3:1380821-1380840 | MS.gene058792:intron | 45.0% |
| ! | GTTTTATCCCCTTTGGACCT+GGG | + | chr3.3:1380999-1381018 | None:intergenic | 45.0% |
| ! | TAGTCTTTTCAGCCCATTGG+AGG | - | chr3.3:1382261-1382280 | MS.gene058792:CDS | 45.0% |
| ! | TGTTTTATCCCCTTTGGACC+TGG | + | chr3.3:1381000-1381019 | None:intergenic | 45.0% |
| ! | TTGTCTGTCATGCCGTTTGA+TGG | - | chr3.3:1381600-1381619 | MS.gene058792:intron | 45.0% |
| !! | AGCCTTAATAGCTTGCTCCA+TGG | + | chr3.3:1382751-1382770 | None:intergenic | 45.0% |
| !! | AGCTTACAGGCATTGGAATG+GGG | + | chr3.3:1384108-1384127 | None:intergenic | 45.0% |
| !! | CGCCATTTTCTTTTCTGTGG+AGG | + | chr3.3:1383974-1383993 | None:intergenic | 45.0% |
| !! | TGGCTTTTTCCACTAGGGAA+AGG | - | chr3.3:1384556-1384575 | MS.gene058792:CDS | 45.0% |
| !! | TTGTTGGTTTCCCAGACAAG+AGG | - | chr3.3:1381328-1381347 | MS.gene058792:intron | 45.0% |
| !!! | CTTGCTTTTTCAAAGCTGCC+AGG | + | chr3.3:1383729-1383748 | None:intergenic | 45.0% |
| !!! | AATTTTATAAATTTCAATTT+TGG | - | chr3.3:1383849-1383868 | MS.gene058792:intron | 5.0% |
| CCTTGGCAAGGAAGGCTTAA+AGG | - | chr3.3:1380735-1380754 | MS.gene058792:intron | 50.0% | |
| CCTTTAAGCCTTCCTTGCCA+AGG | + | chr3.3:1380738-1380757 | None:intergenic | 50.0% | |
| CTAACCGCTTCTTGGCCAAA+CGG | - | chr3.3:1380526-1380545 | MS.gene058792:intron | 50.0% | |
| CTGACGCAGGACAACTATAC+AGG | + | chr3.3:1384039-1384058 | None:intergenic | 50.0% | |
| CTGTATAGTTGTCCTGCGTC+AGG | - | chr3.3:1384037-1384056 | MS.gene058792:intron | 50.0% | |
| GCTCCAAAGGTTTCTCCTTC+TGG | + | chr3.3:1383940-1383959 | None:intergenic | 50.0% | |
| GGAAATCTCCTTGGCAAGGA+AGG | - | chr3.3:1380727-1380746 | MS.gene058792:intron | 50.0% | |
| GGATGGAAATCTCCTTGGCA+AGG | - | chr3.3:1380723-1380742 | MS.gene058792:intron | 50.0% | |
| GGCAATGGAACTCTTGGAAC+TGG | - | chr3.3:1381203-1381222 | MS.gene058792:intron | 50.0% | |
| GTCCCATTCTCATGTCTGCT+TGG | - | chr3.3:1383777-1383796 | MS.gene058792:intron | 50.0% | |
| TCAGCTAGTGCTGTGGCATT+TGG | - | chr3.3:1381164-1381183 | MS.gene058792:intron | 50.0% | |
| TCTTCCGTTTGGCCAAGAAG+CGG | + | chr3.3:1380533-1380552 | None:intergenic | 50.0% | |
| TGGAATATCATGCTCCGCGA+GGG | + | chr3.3:1384526-1384545 | None:intergenic | 50.0% | |
| TGGCAAGGAAGGCTTAAAGG+CGG | - | chr3.3:1380738-1380757 | MS.gene058792:intron | 50.0% | |
| TTACATTCCCAGGCAAGGCA+TGG | - | chr3.3:1380576-1380595 | MS.gene058792:intron | 50.0% | |
| TTGGAAAAACCTGGAGACGG+TGG | + | chr3.3:1379736-1379755 | None:intergenic | 50.0% | |
| TTGGAATATCATGCTCCGCG+AGG | + | chr3.3:1384527-1384546 | None:intergenic | 50.0% | |
| TTTGAGGAGTCGGGAAACAC+TGG | - | chr3.3:1380971-1380990 | MS.gene058792:intron | 50.0% | |
| TTTGGCCAAGAAGCGGTTAG+TGG | + | chr3.3:1380526-1380545 | None:intergenic | 50.0% | |
| ! | AGAGGATGTCGGGTTTGGTA+AGG | - | chr3.3:1380195-1380214 | MS.gene058792:CDS | 50.0% |
| ! | CACATGCCACCTTTTCTGCT+GGG | - | chr3.3:1381492-1381511 | MS.gene058792:CDS | 50.0% |
| ! | CTTTGGAGAGAGTTCCGTCT+TGG | - | chr3.3:1380694-1380713 | MS.gene058792:intron | 50.0% |
| ! | GATGTCGGGTTTGGTAAGGA+GGG | - | chr3.3:1380199-1380218 | MS.gene058792:CDS | 50.0% |
| !! | CCCCGCCATTTTCTTTTCTG+TGG | + | chr3.3:1383977-1383996 | None:intergenic | 50.0% |
| !! | CTTTTCTGTGGAGGCTTTGG+AGG | + | chr3.3:1383965-1383984 | None:intergenic | 50.0% |
| !!! | CTTTTAGCTTTGCCTGACGC+AGG | + | chr3.3:1384052-1384071 | None:intergenic | 50.0% |
| AACATCTCTCCACCGTCTCC+AGG | - | chr3.3:1379724-1379743 | MS.gene058792:CDS | 55.0% | |
| AACGAGTTCCATGCCTTGCC+TGG | + | chr3.3:1380587-1380606 | None:intergenic | 55.0% | |
| ACAGCACTAGCTGATGCTCG+GGG | + | chr3.3:1381158-1381177 | None:intergenic | 55.0% | |
| ACGAGTTCCATGCCTTGCCT+GGG | + | chr3.3:1380586-1380605 | None:intergenic | 55.0% | |
| CACAGCACTAGCTGATGCTC+GGG | + | chr3.3:1381159-1381178 | None:intergenic | 55.0% | |
| CCACAGCACTAGCTGATGCT+CGG | + | chr3.3:1381160-1381179 | None:intergenic | 55.0% | |
| CCAGCAGAAAAGGTGGCATG+TGG | + | chr3.3:1381494-1381513 | None:intergenic | 55.0% | |
| GCTGGAGTGGACAGATGACT+TGG | - | chr3.3:1382647-1382666 | MS.gene058792:intron | 55.0% | |
| GGGTTGTCACCTTTCCCTAG+TGG | + | chr3.3:1384568-1384587 | None:intergenic | 55.0% | |
| GGTGGCATGTGGAGATTGTG+TGG | + | chr3.3:1381483-1381502 | None:intergenic | 55.0% | |
| ! | AAAATGGCGGGGTAGCAGTG+TGG | - | chr3.3:1383985-1384004 | MS.gene058792:intron | 55.0% |
| ! | ACTGGTTCCCAGGTCCAAAG+GGG | - | chr3.3:1380989-1381008 | MS.gene058792:intron | 55.0% |
| ! | AGCAGTGTGGCTCCTTTTGC+TGG | - | chr3.3:1383998-1384017 | MS.gene058792:intron | 55.0% |
| ! | CCACATGCCACCTTTTCTGC+TGG | - | chr3.3:1381491-1381510 | MS.gene058792:CDS | 55.0% |
| ! | GGAGTGGACAGATGACTTGG+AGG | - | chr3.3:1382650-1382669 | MS.gene058792:intron | 55.0% |
| ! | GGATGTCGGGTTTGGTAAGG+AGG | - | chr3.3:1380198-1380217 | MS.gene058792:CDS | 55.0% |
| !! | ACACTGGTTCCCAGGTCCAA+AGG | - | chr3.3:1380987-1381006 | MS.gene058792:intron | 55.0% |
| !! | CACTGGTTCCCAGGTCCAAA+GGG | - | chr3.3:1380988-1381007 | MS.gene058792:intron | 55.0% |
| !! | GGCTTTGGAGGTAGCTCCAA+AGG | + | chr3.3:1383953-1383972 | None:intergenic | 55.0% |
| ATCATGCTCCGCGAGGGCTT+CGG | + | chr3.3:1384520-1384539 | None:intergenic | 60.0% | |
| CCGAGCATCAGCTAGTGCTG+TGG | - | chr3.3:1381157-1381176 | MS.gene058792:intron | 60.0% | |
| !! | GTCGGGAAACACTGGTTCCC+AGG | - | chr3.3:1380979-1380998 | MS.gene058792:intron | 60.0% |
| AGCAAGAGCCGAAGCCCTCG+CGG | - | chr3.3:1384509-1384528 | MS.gene058792:CDS | 65.0% | |
| GGGCGCCACTAACCGCTTCT+TGG | - | chr3.3:1380518-1380537 | MS.gene058792:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 1379627 | 1384603 | 1379627 | ID=MS.gene058792 |
| chr3.3 | mRNA | 1379627 | 1384603 | 1379627 | ID=MS.gene058792.t1;Parent=MS.gene058792 |
| chr3.3 | exon | 1384485 | 1384603 | 1384485 | ID=MS.gene058792.t1.exon1;Parent=MS.gene058792.t1 |
| chr3.3 | CDS | 1384485 | 1384603 | 1384485 | ID=cds.MS.gene058792.t1;Parent=MS.gene058792.t1 |
| chr3.3 | exon | 1384330 | 1384417 | 1384330 | ID=MS.gene058792.t1.exon2;Parent=MS.gene058792.t1 |
| chr3.3 | CDS | 1384330 | 1384417 | 1384330 | ID=cds.MS.gene058792.t1;Parent=MS.gene058792.t1 |
| chr3.3 | exon | 1383349 | 1383642 | 1383349 | ID=MS.gene058792.t1.exon3;Parent=MS.gene058792.t1 |
| chr3.3 | CDS | 1383349 | 1383642 | 1383349 | ID=cds.MS.gene058792.t1;Parent=MS.gene058792.t1 |
| chr3.3 | exon | 1382920 | 1383078 | 1382920 | ID=MS.gene058792.t1.exon4;Parent=MS.gene058792.t1 |
| chr3.3 | CDS | 1382920 | 1383078 | 1382920 | ID=cds.MS.gene058792.t1;Parent=MS.gene058792.t1 |
| chr3.3 | exon | 1382157 | 1382297 | 1382157 | ID=MS.gene058792.t1.exon5;Parent=MS.gene058792.t1 |
| chr3.3 | CDS | 1382157 | 1382297 | 1382157 | ID=cds.MS.gene058792.t1;Parent=MS.gene058792.t1 |
| chr3.3 | exon | 1381948 | 1382004 | 1381948 | ID=MS.gene058792.t1.exon6;Parent=MS.gene058792.t1 |
| chr3.3 | CDS | 1381948 | 1382004 | 1381948 | ID=cds.MS.gene058792.t1;Parent=MS.gene058792.t1 |
| chr3.3 | exon | 1381453 | 1381591 | 1381453 | ID=MS.gene058792.t1.exon7;Parent=MS.gene058792.t1 |
| chr3.3 | CDS | 1381453 | 1381591 | 1381453 | ID=cds.MS.gene058792.t1;Parent=MS.gene058792.t1 |
| chr3.3 | exon | 1380411 | 1380515 | 1380411 | ID=MS.gene058792.t1.exon8;Parent=MS.gene058792.t1 |
| chr3.3 | CDS | 1380411 | 1380515 | 1380411 | ID=cds.MS.gene058792.t1;Parent=MS.gene058792.t1 |
| chr3.3 | exon | 1380110 | 1380306 | 1380110 | ID=MS.gene058792.t1.exon9;Parent=MS.gene058792.t1 |
| chr3.3 | CDS | 1380110 | 1380306 | 1380110 | ID=cds.MS.gene058792.t1;Parent=MS.gene058792.t1 |
| chr3.3 | exon | 1379900 | 1379941 | 1379900 | ID=MS.gene058792.t1.exon10;Parent=MS.gene058792.t1 |
| chr3.3 | CDS | 1379900 | 1379941 | 1379900 | ID=cds.MS.gene058792.t1;Parent=MS.gene058792.t1 |
| chr3.3 | exon | 1379627 | 1379776 | 1379627 | ID=MS.gene058792.t1.exon11;Parent=MS.gene058792.t1 |
| chr3.3 | CDS | 1379627 | 1379776 | 1379627 | ID=cds.MS.gene058792.t1;Parent=MS.gene058792.t1 |
| Gene Sequence |
| Protein sequence |
