Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059030.t1 | XP_013468403.1 | 96.2 | 368 | 13 | 1 | 1 | 367 | 1 | 368 | 1.80E-197 | 698.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059030.t1 | Q8R1Q9 | 25.8 | 365 | 205 | 9 | 11 | 365 | 15 | 323 | 8.5e-18 | 92.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059030.t1 | A0A072VWJ0 | 96.2 | 368 | 13 | 1 | 1 | 367 | 1 | 368 | 1.3e-197 | 698.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051568 | MS.gene059030 | 0.8222 | 2.69E-53 | -1.69E-46 |
| MS.gene052637 | MS.gene059030 | 0.821883 | 3.19E-53 | -1.69E-46 |
| MS.gene058650 | MS.gene059030 | 0.80675 | 7.07E-50 | -1.69E-46 |
| MS.gene059030 | MS.gene063696 | 0.802991 | 4.31E-49 | -1.69E-46 |
| MS.gene059030 | MS.gene24016 | 0.992422 | 3.41E-193 | -1.69E-46 |
| MS.gene059030 | MS.gene67306 | 0.808381 | 3.19E-50 | -1.69E-46 |
| MS.gene059030 | MS.gene94815 | 0.990492 | 6.81E-183 | -1.69E-46 |
| MS.gene059030 | MS.gene96454 | 0.829579 | 4.76E-55 | -1.69E-46 |
| MS.gene059030 | MS.gene97211 | 0.813144 | 2.97E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059030.t1 | MTR_1g069325 | 96.196 | 368 | 13 | 1 | 1 | 367 | 1 | 368 | 0.0 | 722 |
| MS.gene059030.t1 | MTR_1g069325 | 81.522 | 368 | 16 | 2 | 1 | 367 | 1 | 317 | 0.0 | 568 |
| MS.gene059030.t1 | MTR_7g099270 | 67.131 | 359 | 118 | 0 | 9 | 367 | 6 | 364 | 0.0 | 514 |
| MS.gene059030.t1 | MTR_7g099280 | 61.853 | 367 | 140 | 0 | 1 | 367 | 45 | 411 | 7.29e-171 | 482 |
| MS.gene059030.t1 | MTR_7g099280 | 61.853 | 367 | 140 | 0 | 1 | 367 | 43 | 409 | 7.34e-171 | 482 |
| MS.gene059030.t1 | MTR_1g069320 | 65.363 | 358 | 124 | 0 | 9 | 366 | 134 | 491 | 1.14e-170 | 485 |
| MS.gene059030.t1 | MTR_7g099280 | 59.939 | 327 | 131 | 0 | 1 | 327 | 43 | 369 | 4.09e-145 | 416 |
| MS.gene059030.t1 | MTR_7g099280 | 55.586 | 367 | 126 | 1 | 1 | 367 | 53 | 382 | 6.97e-145 | 415 |
| MS.gene059030.t1 | MTR_7g099280 | 58.696 | 276 | 114 | 0 | 1 | 276 | 43 | 318 | 3.71e-115 | 339 |
| MS.gene059030.t1 | MTR_7g099280 | 59.398 | 266 | 108 | 0 | 1 | 266 | 43 | 308 | 9.87e-112 | 328 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059030.t1 | AT4G28706 | 62.921 | 356 | 132 | 0 | 11 | 366 | 45 | 400 | 9.33e-170 | 479 |
| MS.gene059030.t1 | AT4G28706 | 62.921 | 356 | 132 | 0 | 11 | 366 | 47 | 402 | 1.40e-169 | 479 |
| MS.gene059030.t1 | AT4G28706 | 62.745 | 357 | 132 | 1 | 11 | 366 | 47 | 403 | 1.15e-167 | 474 |
| MS.gene059030.t1 | AT4G28706 | 62.570 | 358 | 133 | 1 | 11 | 367 | 47 | 404 | 2.46e-167 | 474 |
| MS.gene059030.t1 | AT5G43910 | 53.678 | 367 | 165 | 2 | 1 | 366 | 1 | 363 | 2.95e-137 | 395 |
| MS.gene059030.t1 | AT5G43910 | 52.615 | 325 | 149 | 2 | 1 | 324 | 1 | 321 | 2.26e-116 | 341 |
| MS.gene059030.t1 | AT5G43910 | 50.530 | 283 | 139 | 1 | 1 | 282 | 1 | 283 | 1.80e-97 | 292 |
| MS.gene059030.t1 | AT5G43910 | 50.178 | 281 | 139 | 1 | 1 | 280 | 1 | 281 | 4.26e-97 | 290 |
| MS.gene059030.t1 | AT5G43910 | 50.903 | 277 | 135 | 1 | 1 | 276 | 1 | 277 | 6.15e-97 | 290 |
Find 91 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTAAGATGGATATATTT+TGG | 0.178686 | 1.2:+52196345 | None:intergenic |
| CTATTCTTGGTGTCTGGTTT+TGG | 0.209515 | 1.2:+52199631 | None:intergenic |
| GAATTGAGTGGTTCTATTCT+TGG | 0.228607 | 1.2:+52199618 | None:intergenic |
| GTATGTGGGAGGTTATATTT+TGG | 0.242581 | 1.2:-52195226 | MS.gene059030:CDS |
| AAAACCTTAGAAATTATTCT+TGG | 0.273984 | 1.2:+52197572 | None:intergenic |
| TAAATTTGTGATTGCAACTT+TGG | 0.288479 | 1.2:-52196061 | MS.gene059030:CDS |
| AAAGCCAAGAATAATTTCTA+AGG | 0.303177 | 1.2:-52197576 | MS.gene059030:intron |
| GTTGACTTGTGCTGCTCGTT+TGG | 0.315907 | 1.2:-52197603 | MS.gene059030:CDS |
| CAGGTTGGGTTTGGTGGCGT+TGG | 0.319074 | 1.2:-52199685 | MS.gene059030:CDS |
| GGAAGGATTGAATGACCTTC+TGG | 0.319125 | 1.2:-52196306 | MS.gene059030:CDS |
| TTTGTGTGGCAGGTTGGGTT+TGG | 0.343196 | 1.2:-52199694 | MS.gene059030:intron |
| TTGACTTGTGCTGCTCGTTT+GGG | 0.347544 | 1.2:-52197602 | MS.gene059030:CDS |
| TTAATAAAGTATGCCAGGTT+TGG | 0.355803 | 1.2:+52194442 | None:intergenic |
| AGGCATCCTAACATCAAAAT+AGG | 0.360561 | 1.2:+52196659 | None:intergenic |
| TCAATAATAATGTAGCTAAA+TGG | 0.361983 | 1.2:+52197129 | None:intergenic |
| AGCACAAGTCAACGCATTTC+CGG | 0.383878 | 1.2:+52197613 | None:intergenic |
| GTGGTTCTATTCTTGGTGTC+TGG | 0.388614 | 1.2:+52199625 | None:intergenic |
| AAATTTGTGATTGCAACTTT+GGG | 0.399648 | 1.2:-52196060 | MS.gene059030:CDS |
| AGGTTTGGATCAGTGCGATA+TGG | 0.407682 | 1.2:+52194457 | None:intergenic |
| GCAATCACAAATTTAAGTCT+TGG | 0.419317 | 1.2:+52196069 | None:intergenic |
| GTGTGGCAGGTTGGGTTTGG+TGG | 0.423838 | 1.2:-52199691 | MS.gene059030:intron |
| TGTGGATACTTCTTCATTTG+TGG | 0.428757 | 1.2:-52197418 | MS.gene059030:intron |
| ATTGAATGACCTTCTGGACT+TGG | 0.430538 | 1.2:-52196300 | MS.gene059030:CDS |
| CCTTTCAGCATCAACTAAGA+TGG | 0.434238 | 1.2:+52196334 | None:intergenic |
| TTTGCACGCGAAAGATCTTC+CGG | 0.437545 | 1.2:+52196714 | None:intergenic |
| GGTGCTGGGGATGCATTTGT+TGG | 0.438231 | 1.2:-52195160 | MS.gene059030:CDS |
| GCAATGACAAGAGCAGTTGC+AGG | 0.440063 | 1.2:+52196639 | None:intergenic |
| AGAATTGAAACTAGTGCTCT+TGG | 0.449446 | 1.2:+52196102 | None:intergenic |
| GAATAGAACCACTCAATTCA+AGG | 0.452926 | 1.2:-52199614 | MS.gene059030:intron |
| GCTGCTCAATGTAGAGCTCT+TGG | 0.454335 | 1.2:-52194496 | MS.gene059030:CDS |
| CTTATTGATACAACTGGTGC+TGG | 0.460294 | 1.2:-52195175 | MS.gene059030:CDS |
| AGATCTTCCGGTACCATTGT+AGG | 0.463214 | 1.2:+52196726 | None:intergenic |
| TGCTCTTGTCATTGCTAAAG+AGG | 0.464049 | 1.2:-52196631 | MS.gene059030:intron |
| TCTAATTAATAAAGTATGCC+AGG | 0.474893 | 1.2:+52194437 | None:intergenic |
| TCGGAGCTTATTGATACAAC+TGG | 0.481009 | 1.2:-52195181 | MS.gene059030:CDS |
| CTAGGTTGCAAATGACGCTC+AGG | 0.489161 | 1.2:-52197475 | MS.gene059030:intron |
| AGGGAGAGGAAAAGCAGTGT+TGG | 0.491482 | 1.2:+52199811 | None:intergenic |
| AAATTGTTATCTGCATTGAA+TGG | 0.495412 | 1.2:-52196693 | MS.gene059030:CDS |
| GGAGCTAGAAGCTGAGGGTG+TGG | 0.495904 | 1.2:-52197436 | MS.gene059030:CDS |
| GAAATCTTTAACAATGAGAA+AGG | 0.497680 | 1.2:-52195850 | MS.gene059030:CDS |
| TGCAAATGACGCTCAGGGTA+GGG | 0.500517 | 1.2:-52197469 | MS.gene059030:CDS |
| GCAATATAGGTGCAAGGTGG+GGG | 0.509074 | 1.2:-52197641 | MS.gene059030:intron |
| GTTACAAAATTTAGAGCAGA+CGG | 0.513539 | 1.2:-52195259 | MS.gene059030:CDS |
| TGTTTCCAGGTCTCAAAGGA+AGG | 0.519022 | 1.2:-52197159 | MS.gene059030:intron |
| TGCAATATAGGTGCAAGGTG+GGG | 0.519555 | 1.2:-52197642 | MS.gene059030:intron |
| TTATTGATACAACTGGTGCT+GGG | 0.519824 | 1.2:-52195174 | MS.gene059030:CDS |
| CATGCCAACCTGCGTTGCCT+CGG | 0.527612 | 1.2:-52195814 | MS.gene059030:intron |
| GACGGGATAGGATCAGTATG+TGG | 0.528060 | 1.2:-52195241 | MS.gene059030:CDS |
| AAATTTAGAGCAGACGGGAT+AGG | 0.530754 | 1.2:-52195253 | MS.gene059030:CDS |
| CGAGGCAACGCAGGTTGGCA+TGG | 0.530850 | 1.2:+52195815 | None:intergenic |
| AGGTCATTCAATCCTTCCCT+TGG | 0.534609 | 1.2:+52196311 | None:intergenic |
| AAGAAGACACTCACAATGAC+AGG | 0.535206 | 1.2:+52199782 | None:intergenic |
| TAGTTGATGCTGAAAGGCCA+AGG | 0.535644 | 1.2:-52196328 | MS.gene059030:CDS |
| AATGTAGAGCTCTTGGAGCT+AGG | 0.538329 | 1.2:-52194489 | MS.gene059030:CDS |
| GGGTTCACACTTAGAAGAAG+TGG | 0.542271 | 1.2:-52195889 | MS.gene059030:CDS |
| GATAGAGGAGCTAGAAGCTG+AGG | 0.543786 | 1.2:-52197442 | MS.gene059030:CDS |
| TTGCAAATGACGCTCAGGGT+AGG | 0.550449 | 1.2:-52197470 | MS.gene059030:CDS |
| TTGCAATATAGGTGCAAGGT+GGG | 0.552594 | 1.2:-52197643 | MS.gene059030:intron |
| ATGCTCAGAAAAGTTTCCTA+AGG | 0.555246 | 1.2:-52196264 | MS.gene059030:intron |
| CCATCTTAGTTGATGCTGAA+AGG | 0.556239 | 1.2:-52196334 | MS.gene059030:CDS |
| AGGATCTCCTACAATGGTAC+CGG | 0.559044 | 1.2:-52196733 | MS.gene059030:CDS |
| CATTTGTTTCCAGGTCTCAA+AGG | 0.562119 | 1.2:-52197163 | MS.gene059030:intron |
| AGCTATTACCGAGGCAACGC+AGG | 0.562817 | 1.2:+52195806 | None:intergenic |
| TGCATTGAATGGAGCTAGAG+TGG | 0.563511 | 1.2:-52196682 | MS.gene059030:CDS |
| GCTTACCACATGAGAAGCAA+AGG | 0.564484 | 1.2:+52194812 | None:intergenic |
| GTTTCCAGGTCTCAAAGGAA+GGG | 0.571955 | 1.2:-52197158 | MS.gene059030:intron |
| ATATCGCACTGATCCAAACC+TGG | 0.578250 | 1.2:-52194455 | MS.gene059030:CDS |
| CACAGAAGGATCTCCTACAA+TGG | 0.585278 | 1.2:-52196739 | MS.gene059030:CDS |
| ACACTTAGAAGAAGTGGATG+TGG | 0.593132 | 1.2:-52195883 | MS.gene059030:CDS |
| CATAATCAGCCAAGTCCAGA+AGG | 0.594681 | 1.2:+52196291 | None:intergenic |
| ATGCTTCAGAAATGTGCAGA+TGG | 0.596169 | 1.2:-52196021 | MS.gene059030:intron |
| TTACAAAATTTAGAGCAGAC+GGG | 0.602375 | 1.2:-52195258 | MS.gene059030:CDS |
| GTTGTATCAATAAGCTCCGA+TGG | 0.602597 | 1.2:+52195184 | None:intergenic |
| ATTACCGAGGCAACGCAGGT+TGG | 0.609993 | 1.2:+52195810 | None:intergenic |
| GTTGCCCTTTGCTTCTCATG+TGG | 0.613678 | 1.2:-52194817 | MS.gene059030:intron |
| CTTACCACATGAGAAGCAAA+GGG | 0.616843 | 1.2:+52194813 | None:intergenic |
| CGAACATGTATATTCACAGA+AGG | 0.631793 | 1.2:-52196753 | MS.gene059030:CDS |
| ACGGGATAGGATCAGTATGT+GGG | 0.632094 | 1.2:-52195240 | MS.gene059030:CDS |
| TATTGATACAACTGGTGCTG+GGG | 0.632340 | 1.2:-52195173 | MS.gene059030:CDS |
| GATGCTGAAAGGCCAAGGGA+AGG | 0.639502 | 1.2:-52196323 | MS.gene059030:CDS |
| ATAGAGGAGCTAGAAGCTGA+GGG | 0.648546 | 1.2:-52197441 | MS.gene059030:CDS |
| ATTGCAACTTTGGGAAAAGA+CGG | 0.651143 | 1.2:-52196051 | MS.gene059030:CDS |
| AGGATGAACCTTGAATTGAG+TGG | 0.655549 | 1.2:+52199606 | None:intergenic |
| AGAGCTCTTGGAGCTAGGAG+TGG | 0.656252 | 1.2:-52194484 | MS.gene059030:CDS |
| TAGGTTGCAAATGACGCTCA+GGG | 0.659046 | 1.2:-52197474 | MS.gene059030:CDS |
| AGTTGATGCTGAAAGGCCAA+GGG | 0.668854 | 1.2:-52196327 | MS.gene059030:CDS |
| GTATCAATAAGCTCCGATGG+TGG | 0.679992 | 1.2:+52195187 | None:intergenic |
| GGATAGGATCAGTATGTGGG+AGG | 0.683588 | 1.2:-52195237 | MS.gene059030:CDS |
| TTTGCAATATAGGTGCAAGG+TGG | 0.684597 | 1.2:-52197644 | MS.gene059030:intron |
| CATTTCACAGACATGGACAG+AGG | 0.705633 | 1.2:-52196136 | MS.gene059030:intron |
| GTGTTTGCAATATAGGTGCA+AGG | 0.708600 | 1.2:-52197647 | MS.gene059030:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGTCAAAAAAATATAATTA+CGG | - | chr1.2:52194765-52194784 | MS.gene059030:intron | 10.0% |
| !!! | GCTAATTATATTTTAAATAT+TGG | - | chr1.2:52195722-52195741 | MS.gene059030:intron | 10.0% |
| !! | AAAAACAAATCTTATGTATA+AGG | - | chr1.2:52194870-52194889 | MS.gene059030:intron | 15.0% |
| !! | AAATTAGTAGTATTAATTAG+GGG | - | chr1.2:52196052-52196071 | MS.gene059030:CDS | 15.0% |
| !! | ACAAATTAGTAGTATTAATT+AGG | - | chr1.2:52196050-52196069 | MS.gene059030:CDS | 15.0% |
| !! | ATCATAATTCTAAATAGATT+CGG | - | chr1.2:52197687-52197706 | MS.gene059030:intron | 15.0% |
| !! | ATGTAAAATCATTTAAGTAA+TGG | + | chr1.2:52197171-52197190 | None:intergenic | 15.0% |
| !! | ATTGTAATAATAAAAACACA+AGG | + | chr1.2:52194687-52194706 | None:intergenic | 15.0% |
| !! | CAAATTAGTAGTATTAATTA+GGG | - | chr1.2:52196051-52196070 | MS.gene059030:CDS | 15.0% |
| !! | TAATAAAAACTGAGAATATA+GGG | - | chr1.2:52198613-52198632 | MS.gene059030:intron | 15.0% |
| !! | TATAAGTATATGAAAGTTAT+TGG | - | chr1.2:52197254-52197273 | MS.gene059030:intron | 15.0% |
| !! | TTAATAAAAACTGAGAATAT+AGG | - | chr1.2:52198612-52198631 | MS.gene059030:intron | 15.0% |
| !!! | GACATATTTTATTTTAGATA+TGG | + | chr1.2:52196970-52196989 | None:intergenic | 15.0% |
| !!! | TGAAAATTGAAGTAAATTTT+GGG | + | chr1.2:52196898-52196917 | None:intergenic | 15.0% |
| !!! | TTGAAAATTGAAGTAAATTT+TGG | + | chr1.2:52196899-52196918 | None:intergenic | 15.0% |
| !! | AAAACCTTAGAAATTATTCT+TGG | + | chr1.2:52196687-52196706 | None:intergenic | 20.0% |
| !! | AAAATATTACCCTATCTTAA+TGG | + | chr1.2:52195582-52195601 | None:intergenic | 20.0% |
| !! | AAAGTAATTGTAAGCATATA+TGG | - | chr1.2:52198585-52198604 | MS.gene059030:intron | 20.0% |
| !! | AAATGTGAAAAAAGTAAAGA+GGG | + | chr1.2:52195924-52195943 | None:intergenic | 20.0% |
| !! | AATAATGAATACTATAGACA+AGG | - | chr1.2:52194838-52194857 | MS.gene059030:CDS | 20.0% |
| !! | ACATACTTTACATTGAAAAT+CGG | - | chr1.2:52198651-52198670 | MS.gene059030:intron | 20.0% |
| !! | ATATAAACAAAACAGTTGTT+TGG | + | chr1.2:52199335-52199354 | None:intergenic | 20.0% |
| !! | CAAAAATAAAATCAAATGGA+TGG | - | chr1.2:52196137-52196156 | MS.gene059030:intron | 20.0% |
| !! | CTAATTAATTTCTAATGACT+AGG | - | chr1.2:52196763-52196782 | MS.gene059030:CDS | 20.0% |
| !! | TATATCATCTTATCACTATT+TGG | + | chr1.2:52199492-52199511 | None:intergenic | 20.0% |
| !! | TCAATAATAATGTAGCTAAA+TGG | + | chr1.2:52197130-52197149 | None:intergenic | 20.0% |
| !! | TCAATATTTCTTAATGATGT+TGG | - | chr1.2:52196248-52196267 | MS.gene059030:intron | 20.0% |
| !! | TGATTAGAAAGGAAAAAAAA+AGG | + | chr1.2:52198842-52198861 | None:intergenic | 20.0% |
| !! | TTAAGTTAAATTTAAGCACT+AGG | - | chr1.2:52197301-52197320 | MS.gene059030:intron | 20.0% |
| !!! | AAAGTCTTTTAAGATCTATT+GGG | - | chr1.2:52196331-52196350 | MS.gene059030:CDS | 20.0% |
| !!! | ACAAGAACATTAGTTAATTT+TGG | - | chr1.2:52198068-52198087 | MS.gene059030:intron | 20.0% |
| !!! | ACTTGATAATTATATGAGAA+GGG | + | chr1.2:52198493-52198512 | None:intergenic | 20.0% |
| !!! | CAAGAACATTAGTTAATTTT+GGG | - | chr1.2:52198069-52198088 | MS.gene059030:intron | 20.0% |
| !!! | CTTATATTAAACACATGTTT+TGG | + | chr1.2:52196474-52196493 | None:intergenic | 20.0% |
| !!! | TATATTAATGTGTTTGTTGT+TGG | - | chr1.2:52199716-52199735 | MS.gene059030:intron | 20.0% |
| !!! | TATGATAATGCACAATTATT+AGG | + | chr1.2:52198700-52198719 | None:intergenic | 20.0% |
| !!! | TCTAAATTTTGTAACATTCT+AGG | + | chr1.2:52198992-52199011 | None:intergenic | 20.0% |
| !!! | TGTATAATTTTAGTCAAAGT+GGG | - | chr1.2:52195665-52195684 | MS.gene059030:intron | 20.0% |
| !!! | TTATATTTTAAATATTGGCG+TGG | - | chr1.2:52195727-52195746 | MS.gene059030:intron | 20.0% |
| !!! | TTTTTTTCCTTTCTAATCAA+TGG | - | chr1.2:52198843-52198862 | MS.gene059030:intron | 20.0% |
| ! | AAAGCCAAGAATAATTTCTA+AGG | - | chr1.2:52196680-52196699 | MS.gene059030:CDS | 25.0% |
| ! | AAATAGCAAGTTTATGATGT+TGG | + | chr1.2:52197015-52197034 | None:intergenic | 25.0% |
| ! | AAATTGTTATCTGCATTGAA+TGG | - | chr1.2:52197563-52197582 | MS.gene059030:intron | 25.0% |
| ! | AAATTTGTGATTGCAACTTT+GGG | - | chr1.2:52198196-52198215 | MS.gene059030:intron | 25.0% |
| ! | AAGGAAAAAAAAAGGTTGTA+TGG | + | chr1.2:52198834-52198853 | None:intergenic | 25.0% |
| ! | AATAAAAACACAAGGAAAAG+AGG | + | chr1.2:52194679-52194698 | None:intergenic | 25.0% |
| ! | AATGAATGAAATTGTTTGTG+TGG | - | chr1.2:52194548-52194567 | MS.gene059030:intron | 25.0% |
| ! | AATGTGAAAAAAGTAAAGAG+GGG | + | chr1.2:52195923-52195942 | None:intergenic | 25.0% |
| ! | AATTAGATTTCTTAAGCATG+TGG | - | chr1.2:52197380-52197399 | MS.gene059030:intron | 25.0% |
| ! | AATTGTCCTTAAAAAATCCA+TGG | + | chr1.2:52195101-52195120 | None:intergenic | 25.0% |
| ! | ACAAATCTTATGTATAAGGA+CGG | - | chr1.2:52194874-52194893 | MS.gene059030:intron | 25.0% |
| ! | ATGCATCTAGTAATTTGAAA+AGG | - | chr1.2:52196098-52196117 | MS.gene059030:CDS | 25.0% |
| ! | ATTAATTAGCCACATTCATA+AGG | + | chr1.2:52196752-52196771 | None:intergenic | 25.0% |
| ! | ATTATTAATTGAAATCTCCG+TGG | - | chr1.2:52195046-52195065 | MS.gene059030:intron | 25.0% |
| ! | GAAATCTTTAACAATGAGAA+AGG | - | chr1.2:52198406-52198425 | MS.gene059030:intron | 25.0% |
| ! | GAAATGTGAAAAAAGTAAAG+AGG | + | chr1.2:52195925-52195944 | None:intergenic | 25.0% |
| ! | GAAGCAATTTAACTGAAATT+AGG | - | chr1.2:52199642-52199661 | MS.gene059030:CDS | 25.0% |
| ! | GATAGCTGCAAATAAAATAA+AGG | + | chr1.2:52199393-52199412 | None:intergenic | 25.0% |
| ! | GATTCATAGAGATAAATGAT+GGG | + | chr1.2:52196389-52196408 | None:intergenic | 25.0% |
| ! | GGGACAAAAATAAAATCAAA+TGG | - | chr1.2:52196133-52196152 | MS.gene059030:intron | 25.0% |
| ! | GTTGTAGCATAATGTAATAT+AGG | - | chr1.2:52197661-52197680 | MS.gene059030:intron | 25.0% |
| ! | TAAATTTGTGATTGCAACTT+TGG | - | chr1.2:52198195-52198214 | MS.gene059030:intron | 25.0% |
| ! | TAAGAATGTCTTAAGAGTTA+AGG | + | chr1.2:52194927-52194946 | None:intergenic | 25.0% |
| ! | TATATCTCTTGAACTTCATA+TGG | - | chr1.2:52195441-52195460 | MS.gene059030:intron | 25.0% |
| ! | TATTACAATGAAGTTCCATT+TGG | - | chr1.2:52194698-52194717 | MS.gene059030:intron | 25.0% |
| ! | TCTAAGTAAATTCTCATTGT+TGG | - | chr1.2:52197758-52197777 | MS.gene059030:intron | 25.0% |
| ! | TGAAAAGGTGATTACATTTA+GGG | - | chr1.2:52196113-52196132 | MS.gene059030:CDS | 25.0% |
| ! | TGATTCATAGAGATAAATGA+TGG | + | chr1.2:52196390-52196409 | None:intergenic | 25.0% |
| ! | TTAACACAATCCTATAAAAC+TGG | + | chr1.2:52196521-52196540 | None:intergenic | 25.0% |
| ! | TTAATTCATGGAATGTTAAG+AGG | + | chr1.2:52199146-52199165 | None:intergenic | 25.0% |
| ! | TTATTAATTGAAATCTCCGT+GGG | - | chr1.2:52195047-52195066 | MS.gene059030:intron | 25.0% |
| ! | TTGAAAAGGTGATTACATTT+AGG | - | chr1.2:52196112-52196131 | MS.gene059030:CDS | 25.0% |
| !! | AATTCAATTAGCTTGGTTTA+TGG | + | chr1.2:52197871-52197890 | None:intergenic | 25.0% |
| !! | CAACTAAGATGGATATATTT+TGG | + | chr1.2:52197914-52197933 | None:intergenic | 25.0% |
| !! | CACTTGATAATTATATGAGA+AGG | + | chr1.2:52198494-52198513 | None:intergenic | 25.0% |
| !! | CTTGATAATTATATGAGAAG+GGG | + | chr1.2:52198492-52198511 | None:intergenic | 25.0% |
| !! | TATTAATTAGGGGTATGTTT+AGG | - | chr1.2:52196062-52196081 | MS.gene059030:CDS | 25.0% |
| !! | TTGATAATTATATGAGAAGG+GGG | + | chr1.2:52198491-52198510 | None:intergenic | 25.0% |
| !! | TTTATCGTAAATTTGAGATC+AGG | + | chr1.2:52199198-52199217 | None:intergenic | 25.0% |
| !!! | CAAAGTCTTTTAAGATCTAT+TGG | - | chr1.2:52196330-52196349 | MS.gene059030:CDS | 25.0% |
| !!! | CACTAGTTTCAATTCTTTTA+AGG | - | chr1.2:52198161-52198180 | MS.gene059030:intron | 25.0% |
| !!! | CATTGTTTAACATTTGTTGT+TGG | - | chr1.2:52194970-52194989 | MS.gene059030:intron | 25.0% |
| !!! | CTGTATAATTTTAGTCAAAG+TGG | - | chr1.2:52195664-52195683 | MS.gene059030:intron | 25.0% |
| !!! | GAGGTATAACTAATTTTGAT+TGG | + | chr1.2:52194725-52194744 | None:intergenic | 25.0% |
| !!! | TTGATAGTGAGTACTATTAT+GGG | - | chr1.2:52195700-52195719 | MS.gene059030:intron | 25.0% |
| !!! | TTTGATAGTGAGTACTATTA+TGG | - | chr1.2:52195699-52195718 | MS.gene059030:intron | 25.0% |
| AAGTAAATTCTCATTGTTGG+AGG | - | chr1.2:52197761-52197780 | MS.gene059030:intron | 30.0% | |
| ACCATTGCTAATAGTTCTTT+AGG | + | chr1.2:52195539-52195558 | None:intergenic | 30.0% | |
| ACTCAAAAACCTTATGAATG+TGG | - | chr1.2:52196740-52196759 | MS.gene059030:CDS | 30.0% | |
| AGAAATTGTGTTAGAAATCG+TGG | + | chr1.2:52196550-52196569 | None:intergenic | 30.0% | |
| AGGTATTCCTTCACAATATT+TGG | + | chr1.2:52197807-52197826 | None:intergenic | 30.0% | |
| ATCTGAAAAAATTCCACCAT+CGG | - | chr1.2:52199056-52199075 | MS.gene059030:intron | 30.0% | |
| CAAATGGATGGTTACATTAA+GGG | - | chr1.2:52196149-52196168 | MS.gene059030:intron | 30.0% | |
| CAAGTGAAAAATTAGGAGAA+AGG | + | chr1.2:52197212-52197231 | None:intergenic | 30.0% | |
| CAATGTAGGTTACCAAAATA+GGG | + | chr1.2:52198787-52198806 | None:intergenic | 30.0% | |
| CTCACTAGACATTATGTTAT+TGG | + | chr1.2:52197345-52197364 | None:intergenic | 30.0% | |
| CTGAAATTAGGAGAAAATCA+AGG | - | chr1.2:52199654-52199673 | MS.gene059030:CDS | 30.0% | |
| GATGCATTCATATACAAGAA+TGG | - | chr1.2:52198300-52198319 | MS.gene059030:intron | 30.0% | |
| GCAATCACAAATTTAAGTCT+TGG | + | chr1.2:52198190-52198209 | None:intergenic | 30.0% | |
| TAATTGAATTTCGCTCTTAC+AGG | - | chr1.2:52197881-52197900 | MS.gene059030:intron | 30.0% | |
| TAGCAGTTAATAACAAACAC+AGG | + | chr1.2:52199696-52199715 | None:intergenic | 30.0% | |
| TATATGAATGCATCATGACA+AGG | + | chr1.2:52198294-52198313 | None:intergenic | 30.0% | |
| TCAAATGGATGGTTACATTA+AGG | - | chr1.2:52196148-52196167 | MS.gene059030:intron | 30.0% | |
| TCCTAAAGAACTATTAGCAA+TGG | - | chr1.2:52195535-52195554 | MS.gene059030:intron | 30.0% | |
| TCGTTAAAAGAGTTTCACAT+AGG | - | chr1.2:52196282-52196301 | MS.gene059030:CDS | 30.0% | |
| TGAATGTGTGTTTGCAATAT+AGG | - | chr1.2:52196602-52196621 | MS.gene059030:intron | 30.0% | |
| TGATAATTATATGAGAAGGG+GGG | + | chr1.2:52198490-52198509 | None:intergenic | 30.0% | |
| TTAATAAAGTATGCCAGGTT+TGG | + | chr1.2:52199817-52199836 | None:intergenic | 30.0% | |
| TTAGAAAGTTCACAACAATG+TGG | - | chr1.2:52195509-52195528 | MS.gene059030:intron | 30.0% | |
| TTTGCTCTACCATTAAGATA+GGG | - | chr1.2:52195570-52195589 | MS.gene059030:intron | 30.0% | |
| ! | AACGATCGATTTCAAATTGA+TGG | - | chr1.2:52199257-52199276 | MS.gene059030:intron | 30.0% |
| ! | ACTGTTATGTTTTCTCATTC+TGG | - | chr1.2:52194507-52194526 | MS.gene059030:intron | 30.0% |
| ! | CTATTAGTACTTTTCTCAAG+TGG | - | chr1.2:52197733-52197752 | MS.gene059030:intron | 30.0% |
| ! | GAATCAATATGTGTGCTTTT+TGG | - | chr1.2:52195009-52195028 | MS.gene059030:intron | 30.0% |
| ! | GTTACAAAATTTAGAGCAGA+CGG | - | chr1.2:52198997-52199016 | MS.gene059030:intron | 30.0% |
| ! | GTTATCTAGAGTTTGATTGA+AGG | - | chr1.2:52195215-52195234 | MS.gene059030:CDS | 30.0% |
| ! | TATAGCACCATTGATTAGAA+AGG | + | chr1.2:52198853-52198872 | None:intergenic | 30.0% |
| ! | TATGTGGGAGGTTATATTTT+GGG | - | chr1.2:52199031-52199050 | MS.gene059030:intron | 30.0% |
| ! | TCAATTTACTTTCTAGCAGA+GGG | - | chr1.2:52198347-52198366 | MS.gene059030:intron | 30.0% |
| ! | TCTCCTAATTTTTCACTTGT+GGG | - | chr1.2:52197213-52197232 | MS.gene059030:intron | 30.0% |
| ! | TTACAAAATTTAGAGCAGAC+GGG | - | chr1.2:52198998-52199017 | MS.gene059030:intron | 30.0% |
| ! | TTCAATTTACTTTCTAGCAG+AGG | - | chr1.2:52198346-52198365 | MS.gene059030:intron | 30.0% |
| ! | TTCTCCTAATTTTTCACTTG+TGG | - | chr1.2:52197212-52197231 | MS.gene059030:intron | 30.0% |
| ! | TTTTGCTCTACCATTAAGAT+AGG | - | chr1.2:52195569-52195588 | MS.gene059030:intron | 30.0% |
| !! | AAGCACTAGGAGTATTAAAA+AGG | - | chr1.2:52197314-52197333 | MS.gene059030:intron | 30.0% |
| !! | TTTGTTGGAGCAGTTTTATA+TGG | - | chr1.2:52199111-52199130 | MS.gene059030:intron | 30.0% |
| !!! | CTAATTTTGATTGGTCCAAA+TGG | + | chr1.2:52194716-52194735 | None:intergenic | 30.0% |
| !!! | TAGCTATTTCTTCCCTATTT+TGG | - | chr1.2:52198772-52198791 | MS.gene059030:intron | 30.0% |
| !!! | TGAGTTCATTGATTTTTGTG+AGG | + | chr1.2:52194744-52194763 | None:intergenic | 30.0% |
| !!! | TGGGTTGCATTTTTTAAGAA+AGG | + | chr1.2:52195757-52195776 | None:intergenic | 30.0% |
| AACAGTTCGTAAAGTGATCT+AGG | + | chr1.2:52199283-52199302 | None:intergenic | 35.0% | |
| AATGAAATTGTTTGTGTGGC+AGG | - | chr1.2:52194552-52194571 | MS.gene059030:intron | 35.0% | |
| AATGTCTTAAGAGTTAAGGC+TGG | + | chr1.2:52194923-52194942 | None:intergenic | 35.0% | |
| ACACAATAAAGGAAACCTGA+TGG | + | chr1.2:52196364-52196383 | None:intergenic | 35.0% | |
| AGAATTGAAACTAGTGCTCT+TGG | + | chr1.2:52198157-52198176 | None:intergenic | 35.0% | |
| AGAGCGAAATTCAATTAGCT+TGG | + | chr1.2:52197878-52197897 | None:intergenic | 35.0% | |
| AGGCATCCTAACATCAAAAT+AGG | + | chr1.2:52197600-52197619 | None:intergenic | 35.0% | |
| ATGACAAGGATCAAACAAAG+GGG | + | chr1.2:52198280-52198299 | None:intergenic | 35.0% | |
| ATGCTCAGAAAAGTTTCCTA+AGG | - | chr1.2:52197992-52198011 | MS.gene059030:intron | 35.0% | |
| ATTGTGTTAGAAATCGTGGT+TGG | + | chr1.2:52196546-52196565 | None:intergenic | 35.0% | |
| CAATCAAACTCTAGATAACC+AGG | + | chr1.2:52195214-52195233 | None:intergenic | 35.0% | |
| CATACAAACAAACGACAGTT+TGG | + | chr1.2:52196000-52196019 | None:intergenic | 35.0% | |
| CATGACAAGGATCAAACAAA+GGG | + | chr1.2:52198281-52198300 | None:intergenic | 35.0% | |
| CCATGTACCAAATATTGTGA+AGG | - | chr1.2:52197797-52197816 | MS.gene059030:intron | 35.0% | |
| CCTTCACAATATTTGGTACA+TGG | + | chr1.2:52197800-52197819 | None:intergenic | 35.0% | |
| CGAACATGTATATTCACAGA+AGG | - | chr1.2:52197503-52197522 | MS.gene059030:intron | 35.0% | |
| CTCACTATCAAACAAAAGCT+AGG | + | chr1.2:52195691-52195710 | None:intergenic | 35.0% | |
| GAATAGAACCACTCAATTCA+AGG | - | chr1.2:52194642-52194661 | MS.gene059030:intron | 35.0% | |
| GCAATGTAGGTTACCAAAAT+AGG | + | chr1.2:52198788-52198807 | None:intergenic | 35.0% | |
| GCAATTAGATGAACAGACAT+AGG | + | chr1.2:52197827-52197846 | None:intergenic | 35.0% | |
| TCATGACAAGGATCAAACAA+AGG | + | chr1.2:52198282-52198301 | None:intergenic | 35.0% | |
| TCCTATAAAACTGGTATGTG+AGG | + | chr1.2:52196512-52196531 | None:intergenic | 35.0% | |
| TGCTAATTTATCCTACAACG+TGG | - | chr1.2:52197464-52197483 | MS.gene059030:CDS | 35.0% | |
| TGTGGATACTTCTTCATTTG+TGG | - | chr1.2:52196838-52196857 | MS.gene059030:intron | 35.0% | |
| TTATTGATACAACTGGTGCT+GGG | - | chr1.2:52199082-52199101 | MS.gene059030:intron | 35.0% | |
| ! | ATCGTAAATTTGAGATCAGG+CGG | + | chr1.2:52199195-52199214 | None:intergenic | 35.0% |
| ! | ATTGCAACTTTGGGAAAAGA+CGG | - | chr1.2:52198205-52198224 | MS.gene059030:intron | 35.0% |
| ! | CTCCTAATTTTTCACTTGTG+GGG | - | chr1.2:52197214-52197233 | MS.gene059030:intron | 35.0% |
| ! | GAATTGAGTGGTTCTATTCT+TGG | + | chr1.2:52194641-52194660 | None:intergenic | 35.0% |
| ! | GTATGTGGGAGGTTATATTT+TGG | - | chr1.2:52199030-52199049 | MS.gene059030:intron | 35.0% |
| ! | GTTTTATGTAGCTATTACCG+AGG | + | chr1.2:52198462-52198481 | None:intergenic | 35.0% |
| ! | TCACAATGACAGGATTTTCA+GGG | + | chr1.2:52194467-52194486 | None:intergenic | 35.0% |
| ! | TGAGAGAGTGTAGTTAAAGT+GGG | + | chr1.2:52195398-52195417 | None:intergenic | 35.0% |
| ! | TGATTTGAGTAACTTGCCTT+AGG | + | chr1.2:52198011-52198030 | None:intergenic | 35.0% |
| ! | TTCCTTTTCCATTTGTTTCC+AGG | - | chr1.2:52197084-52197103 | MS.gene059030:intron | 35.0% |
| ! | TTTTTATTGCGTTAACCCTC+CGG | - | chr1.2:52195171-52195190 | MS.gene059030:CDS | 35.0% |
| !! | AATGATGGGTGACACAATAA+AGG | + | chr1.2:52196375-52196394 | None:intergenic | 35.0% |
| !! | ACCTCACATACCAGTTTTAT+AGG | - | chr1.2:52196508-52196527 | MS.gene059030:intron | 35.0% |
| !! | AGGTTGTATGGTGTTATTGA+TGG | + | chr1.2:52198822-52198841 | None:intergenic | 35.0% |
| !! | GGTTGTATGGTGTTATTGAT+GGG | + | chr1.2:52198821-52198840 | None:intergenic | 35.0% |
| AAATTGTTTGTGTGGCAGGT+TGG | - | chr1.2:52194556-52194575 | MS.gene059030:intron | 40.0% | |
| AACACAAGGAAAAGAGGAAG+AGG | + | chr1.2:52194673-52194692 | None:intergenic | 40.0% | |
| AAGAAGACACTCACAATGAC+AGG | + | chr1.2:52194477-52194496 | None:intergenic | 40.0% | |
| AATAAAGGAAACCTGATGGC+AGG | + | chr1.2:52196360-52196379 | None:intergenic | 40.0% | |
| AATTGTTTGTGTGGCAGGTT+GGG | - | chr1.2:52194557-52194576 | MS.gene059030:intron | 40.0% | |
| ACACTTAGAAGAAGTGGATG+TGG | - | chr1.2:52198373-52198392 | MS.gene059030:intron | 40.0% | |
| ACGCTCATGATCATCACTAT+TGG | + | chr1.2:52196416-52196435 | None:intergenic | 40.0% | |
| AGAGGGGTTACATTAAGAGA+CGG | + | chr1.2:52195907-52195926 | None:intergenic | 40.0% | |
| AGATGACGTGGGAAAGAAAA+TGG | + | chr1.2:52195777-52195796 | None:intergenic | 40.0% | |
| AGCCCCACAAGTGAAAAATT+AGG | + | chr1.2:52197219-52197238 | None:intergenic | 40.0% | |
| AGGATGAACCTTGAATTGAG+TGG | + | chr1.2:52194653-52194672 | None:intergenic | 40.0% | |
| AGTAATGGTGTACATACGTG+TGG | + | chr1.2:52197156-52197175 | None:intergenic | 40.0% | |
| ATGCTTCAGAAATGTGCAGA+TGG | - | chr1.2:52198235-52198254 | MS.gene059030:intron | 40.0% | |
| ATTGAATGACCTTCTGGACT+TGG | - | chr1.2:52197956-52197975 | MS.gene059030:intron | 40.0% | |
| ATTGGATGTGCAACTTCTGT+GGG | - | chr1.2:52195074-52195093 | MS.gene059030:intron | 40.0% | |
| CATTTGTTTCCAGGTCTCAA+AGG | - | chr1.2:52197093-52197112 | MS.gene059030:intron | 40.0% | |
| CCTTTCAGCATCAACTAAGA+TGG | + | chr1.2:52197925-52197944 | None:intergenic | 40.0% | |
| CGAGTCACGTTTATTGATCT+TGG | - | chr1.2:52199169-52199188 | MS.gene059030:intron | 40.0% | |
| CGCTCATGATCATCACTATT+GGG | + | chr1.2:52196415-52196434 | None:intergenic | 40.0% | |
| CGTGACTCGCATTTAATTCA+TGG | + | chr1.2:52199158-52199177 | None:intergenic | 40.0% | |
| CTTACCACATGAGAAGCAAA+GGG | + | chr1.2:52199446-52199465 | None:intergenic | 40.0% | |
| CTTATTGATACAACTGGTGC+TGG | - | chr1.2:52199081-52199100 | MS.gene059030:intron | 40.0% | |
| GACCTGGAAACAAATGGAAA+AGG | + | chr1.2:52197089-52197108 | None:intergenic | 40.0% | |
| GATGACGTGGGAAAGAAAAT+GGG | + | chr1.2:52195776-52195795 | None:intergenic | 40.0% | |
| GGATTTCTTTCTTCGAGAAC+CGG | + | chr1.2:52195193-52195212 | None:intergenic | 40.0% | |
| GTGTTTGCAATATAGGTGCA+AGG | - | chr1.2:52196609-52196628 | MS.gene059030:intron | 40.0% | |
| GTTATTGATGGGAGTCTTTG+TGG | + | chr1.2:52198810-52198829 | None:intergenic | 40.0% | |
| GTTCTCGAAGAAAGAAATCC+TGG | - | chr1.2:52195193-52195212 | MS.gene059030:CDS | 40.0% | |
| GTTGTATCAATAAGCTCCGA+TGG | + | chr1.2:52199075-52199094 | None:intergenic | 40.0% | |
| TCCATGTCTGTGAAATGTGT+CGG | + | chr1.2:52198117-52198136 | None:intergenic | 40.0% | |
| TCGGAGCTTATTGATACAAC+TGG | - | chr1.2:52199075-52199094 | MS.gene059030:intron | 40.0% | |
| TGCTCTTGTCATTGCTAAAG+AGG | - | chr1.2:52197625-52197644 | MS.gene059030:CDS | 40.0% | |
| TGGATGGTTACATTAAGGGA+CGG | - | chr1.2:52196153-52196172 | MS.gene059030:intron | 40.0% | |
| TGTTGGTGTACTCATCTCTT+TGG | - | chr1.2:52194987-52195006 | MS.gene059030:intron | 40.0% | |
| TTGCAATATAGGTGCAAGGT+GGG | - | chr1.2:52196613-52196632 | MS.gene059030:intron | 40.0% | |
| TTGGCATGTGATGGTATTAC+AGG | - | chr1.2:52199735-52199754 | MS.gene059030:intron | 40.0% | |
| TTTGCAATATAGGTGCAAGG+TGG | - | chr1.2:52196612-52196631 | MS.gene059030:intron | 40.0% | |
| ! | AAATTTAGAGCAGACGGGAT+AGG | - | chr1.2:52199003-52199022 | MS.gene059030:intron | 40.0% |
| ! | CATTTTCTCTGGTGAGAAGT+TGG | + | chr1.2:52199420-52199439 | None:intergenic | 40.0% |
| ! | CCATCTTAGTTGATGCTGAA+AGG | - | chr1.2:52197922-52197941 | MS.gene059030:intron | 40.0% |
| ! | CTCACAATGACAGGATTTTC+AGG | + | chr1.2:52194468-52194487 | None:intergenic | 40.0% |
| ! | GTGAGAGAGTGTAGTTAAAG+TGG | + | chr1.2:52195399-52195418 | None:intergenic | 40.0% |
| ! | TATTGATACAACTGGTGCTG+GGG | - | chr1.2:52199083-52199102 | MS.gene059030:intron | 40.0% |
| ! | TTTTCTTTCCCACGTCATCT+CGG | - | chr1.2:52195777-52195796 | MS.gene059030:intron | 40.0% |
| !! | CTTTGAGACCTGGAAACAAA+TGG | + | chr1.2:52197095-52197114 | None:intergenic | 40.0% |
| !! | TGTTTGTTGTTGGCATGTGA+TGG | - | chr1.2:52199726-52199745 | MS.gene059030:intron | 40.0% |
| !!! | CTATTCTTGGTGTCTGGTTT+TGG | + | chr1.2:52194628-52194647 | None:intergenic | 40.0% |
| !!! | GAGTGGCCTATTTTGATGTT+AGG | - | chr1.2:52197591-52197610 | MS.gene059030:CDS | 40.0% |
| !!! | GTGGGTCCATGGATTTTTTA+AGG | - | chr1.2:52195092-52195111 | MS.gene059030:intron | 40.0% |
| AAAGTAGACCGAGATGACGT+GGG | + | chr1.2:52195788-52195807 | None:intergenic | 45.0% | |
| AATGTAGAGCTCTTGGAGCT+AGG | - | chr1.2:52199767-52199786 | MS.gene059030:intron | 45.0% | |
| ACAAGGATCAAACAAAGGGG+TGG | + | chr1.2:52198277-52198296 | None:intergenic | 45.0% | |
| ACGGGATAGGATCAGTATGT+GGG | - | chr1.2:52199016-52199035 | MS.gene059030:intron | 45.0% | |
| AGATCTTCCGGTACCATTGT+AGG | + | chr1.2:52197533-52197552 | None:intergenic | 45.0% | |
| AGCACAAGTCAACGCATTTC+CGG | + | chr1.2:52196646-52196665 | None:intergenic | 45.0% | |
| AGGATCTCCTACAATGGTAC+CGG | - | chr1.2:52197523-52197542 | MS.gene059030:intron | 45.0% | |
| AGGTCATTCAATCCTTCCCT+TGG | + | chr1.2:52197948-52197967 | None:intergenic | 45.0% | |
| AGGTTTGGATCAGTGCGATA+TGG | + | chr1.2:52199802-52199821 | None:intergenic | 45.0% | |
| ATAGAGGAGCTAGAAGCTGA+GGG | - | chr1.2:52196815-52196834 | MS.gene059030:intron | 45.0% | |
| ATGGTTACATTAAGGGACGG+AGG | - | chr1.2:52196156-52196175 | MS.gene059030:intron | 45.0% | |
| CAAACAAAGGGGTGGAAAAG+AGG | + | chr1.2:52198269-52198288 | None:intergenic | 45.0% | |
| CACAGAAGGATCTCCTACAA+TGG | - | chr1.2:52197517-52197536 | MS.gene059030:intron | 45.0% | |
| CATAATCAGCCAAGTCCAGA+AGG | + | chr1.2:52197968-52197987 | None:intergenic | 45.0% | |
| CATTGGATGTGCAACTTCTG+TGG | - | chr1.2:52195073-52195092 | MS.gene059030:intron | 45.0% | |
| CATTTCACAGACATGGACAG+AGG | - | chr1.2:52198120-52198139 | MS.gene059030:intron | 45.0% | |
| GCTTACCACATGAGAAGCAA+AGG | + | chr1.2:52199447-52199466 | None:intergenic | 45.0% | |
| GGAAGGATTGAATGACCTTC+TGG | - | chr1.2:52197950-52197969 | MS.gene059030:intron | 45.0% | |
| GGGTTACATTAAGAGACGGA+GGG | + | chr1.2:52195903-52195922 | None:intergenic | 45.0% | |
| GGGTTCACACTTAGAAGAAG+TGG | - | chr1.2:52198367-52198386 | MS.gene059030:intron | 45.0% | |
| GTATCAATAAGCTCCGATGG+TGG | + | chr1.2:52199072-52199091 | None:intergenic | 45.0% | |
| GTTTCCAGGTCTCAAAGGAA+GGG | - | chr1.2:52197098-52197117 | MS.gene059030:intron | 45.0% | |
| TAACTACACTCTCTCACGCT+TGG | - | chr1.2:52195402-52195421 | MS.gene059030:intron | 45.0% | |
| TAGGTTGCAAATGACGCTCA+GGG | - | chr1.2:52196782-52196801 | MS.gene059030:intron | 45.0% | |
| TCCGACACATTTCACAGACA+TGG | - | chr1.2:52198113-52198132 | MS.gene059030:intron | 45.0% | |
| TCCTACAACGTGGAACATTC+AGG | - | chr1.2:52197474-52197493 | MS.gene059030:CDS | 45.0% | |
| TCCTGAATGTTCCACGTTGT+AGG | + | chr1.2:52197478-52197497 | None:intergenic | 45.0% | |
| TGCAATATAGGTGCAAGGTG+GGG | - | chr1.2:52196614-52196633 | MS.gene059030:intron | 45.0% | |
| TGCATTGAATGGAGCTAGAG+TGG | - | chr1.2:52197574-52197593 | MS.gene059030:intron | 45.0% | |
| TGGTTACATTAAGGGACGGA+GGG | - | chr1.2:52196157-52196176 | MS.gene059030:intron | 45.0% | |
| TGTTTCCAGGTCTCAAAGGA+AGG | - | chr1.2:52197097-52197116 | MS.gene059030:intron | 45.0% | |
| TTCTTTCTTCGAGAACCGGA+GGG | + | chr1.2:52195189-52195208 | None:intergenic | 45.0% | |
| TTTCTTTCTTCGAGAACCGG+AGG | + | chr1.2:52195190-52195209 | None:intergenic | 45.0% | |
| TTTGCACGCGAAAGATCTTC+CGG | + | chr1.2:52197545-52197564 | None:intergenic | 45.0% | |
| ! | AGTTGATGCTGAAAGGCCAA+GGG | - | chr1.2:52197929-52197948 | MS.gene059030:intron | 45.0% |
| ! | ATATCGCACTGATCCAAACC+TGG | - | chr1.2:52199801-52199820 | MS.gene059030:CDS | 45.0% |
| ! | GCAAAGGGCAACATTTTCTC+TGG | + | chr1.2:52199431-52199450 | None:intergenic | 45.0% |
| ! | TAGTTGATGCTGAAAGGCCA+AGG | - | chr1.2:52197928-52197947 | MS.gene059030:intron | 45.0% |
| !! | ATGACAGGATTTTCAGGGAG+AGG | + | chr1.2:52194462-52194481 | None:intergenic | 45.0% |
| !! | GTGGTTCTATTCTTGGTGTC+TGG | + | chr1.2:52194634-52194653 | None:intergenic | 45.0% |
| !! | TCAGGGTAGGGTTTTGATAG+AGG | - | chr1.2:52196799-52196818 | MS.gene059030:intron | 45.0% |
| !! | TTGACTTGTGCTGCTCGTTT+GGG | - | chr1.2:52196654-52196673 | MS.gene059030:CDS | 45.0% |
| !!! | TTTAACTTAATTATAATTTT+TGG | + | chr1.2:52197291-52197310 | None:intergenic | 5.0% |
| AAAGGAAACCTGATGGCAGG+TGG | + | chr1.2:52196357-52196376 | None:intergenic | 50.0% | |
| AGGGAGAGGAAAAGCAGTGT+TGG | + | chr1.2:52194448-52194467 | None:intergenic | 50.0% | |
| CAAAGTAGACCGAGATGACG+TGG | + | chr1.2:52195789-52195808 | None:intergenic | 50.0% | |
| CTAGGTTGCAAATGACGCTC+AGG | - | chr1.2:52196781-52196800 | MS.gene059030:intron | 50.0% | |
| GAAATCTCCGTGGGAGTCAT+TGG | - | chr1.2:52195056-52195075 | MS.gene059030:intron | 50.0% | |
| GACGGGATAGGATCAGTATG+TGG | - | chr1.2:52199015-52199034 | MS.gene059030:intron | 50.0% | |
| GATAGAGGAGCTAGAAGCTG+AGG | - | chr1.2:52196814-52196833 | MS.gene059030:intron | 50.0% | |
| GCAATATAGGTGCAAGGTGG+GGG | - | chr1.2:52196615-52196634 | MS.gene059030:intron | 50.0% | |
| GCAATGACAAGAGCAGTTGC+AGG | + | chr1.2:52197620-52197639 | None:intergenic | 50.0% | |
| GCTGCTCAATGTAGAGCTCT+TGG | - | chr1.2:52199760-52199779 | MS.gene059030:intron | 50.0% | |
| GGATAGGATCAGTATGTGGG+AGG | - | chr1.2:52199019-52199038 | MS.gene059030:intron | 50.0% | |
| GGGAGTCTTTGTGGCAATGT+AGG | + | chr1.2:52198801-52198820 | None:intergenic | 50.0% | |
| GGGGTTACATTAAGAGACGG+AGG | + | chr1.2:52195904-52195923 | None:intergenic | 50.0% | |
| GTTGCCCTTTGCTTCTCATG+TGG | - | chr1.2:52199439-52199458 | MS.gene059030:intron | 50.0% | |
| TGCAAATGACGCTCAGGGTA+GGG | - | chr1.2:52196787-52196806 | MS.gene059030:intron | 50.0% | |
| TGCACATCCAATGACTCCCA+CGG | + | chr1.2:52195066-52195085 | None:intergenic | 50.0% | |
| TTGCAAATGACGCTCAGGGT+AGG | - | chr1.2:52196786-52196805 | MS.gene059030:intron | 50.0% | |
| ! | TTTGTGTGGCAGGTTGGGTT+TGG | - | chr1.2:52194562-52194581 | MS.gene059030:intron | 50.0% |
| !! | GTTGACTTGTGCTGCTCGTT+TGG | - | chr1.2:52196653-52196672 | MS.gene059030:CDS | 50.0% |
| !! | TAGTCCCTTCCTTTGAGACC+TGG | + | chr1.2:52197105-52197124 | None:intergenic | 50.0% |
| AGAGCTCTTGGAGCTAGGAG+TGG | - | chr1.2:52199772-52199791 | MS.gene059030:intron | 55.0% | |
| AGCTATTACCGAGGCAACGC+AGG | + | chr1.2:52198453-52198472 | None:intergenic | 55.0% | |
| ATTACCGAGGCAACGCAGGT+TGG | + | chr1.2:52198449-52198468 | None:intergenic | 55.0% | |
| GATGCTGAAAGGCCAAGGGA+AGG | - | chr1.2:52197933-52197952 | MS.gene059030:intron | 55.0% | |
| GTGCAACTTCTGTGGGTCCA+TGG | - | chr1.2:52195081-52195100 | MS.gene059030:intron | 55.0% | |
| GTGCAAGGTGGGGGAAATAC+CGG | - | chr1.2:52196624-52196643 | MS.gene059030:intron | 55.0% | |
| ! | GGTGCTGGGGATGCATTTGT+TGG | - | chr1.2:52199096-52199115 | MS.gene059030:intron | 55.0% |
| CATGCCAACCTGCGTTGCCT+CGG | - | chr1.2:52198442-52198461 | MS.gene059030:intron | 60.0% | |
| CTATTGGGCCACCTGCCATC+AGG | - | chr1.2:52196346-52196365 | MS.gene059030:CDS | 60.0% | |
| GGAGCTAGAAGCTGAGGGTG+TGG | - | chr1.2:52196820-52196839 | MS.gene059030:intron | 60.0% | |
| ! | GTGTGGCAGGTTGGGTTTGG+TGG | - | chr1.2:52194565-52194584 | MS.gene059030:intron | 60.0% |
| !! | CAGGTTGGGTTTGGTGGCGT+TGG | - | chr1.2:52194571-52194590 | MS.gene059030:intron | 60.0% |
| ! | CGAGGCAACGCAGGTTGGCA+TGG | + | chr1.2:52198444-52198463 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 52194438 | 52199840 | 52194438 | ID=MS.gene059030 |
| chr1.2 | mRNA | 52194438 | 52199840 | 52194438 | ID=MS.gene059030.t1;Parent=MS.gene059030 |
| chr1.2 | exon | 52199796 | 52199840 | 52199796 | ID=MS.gene059030.t1.exon1;Parent=MS.gene059030.t1 |
| chr1.2 | CDS | 52199796 | 52199840 | 52199796 | ID=cds.MS.gene059030.t1;Parent=MS.gene059030.t1 |
| chr1.2 | exon | 52199615 | 52199704 | 52199615 | ID=MS.gene059030.t1.exon2;Parent=MS.gene059030.t1 |
| chr1.2 | CDS | 52199615 | 52199704 | 52199615 | ID=cds.MS.gene059030.t1;Parent=MS.gene059030.t1 |
| chr1.2 | exon | 52197577 | 52197654 | 52197577 | ID=MS.gene059030.t1.exon3;Parent=MS.gene059030.t1 |
| chr1.2 | CDS | 52197577 | 52197654 | 52197577 | ID=cds.MS.gene059030.t1;Parent=MS.gene059030.t1 |
| chr1.2 | exon | 52197419 | 52197493 | 52197419 | ID=MS.gene059030.t1.exon4;Parent=MS.gene059030.t1 |
| chr1.2 | CDS | 52197419 | 52197493 | 52197419 | ID=cds.MS.gene059030.t1;Parent=MS.gene059030.t1 |
| chr1.2 | exon | 52197120 | 52197172 | 52197120 | ID=MS.gene059030.t1.exon5;Parent=MS.gene059030.t1 |
| chr1.2 | CDS | 52197120 | 52197172 | 52197120 | ID=cds.MS.gene059030.t1;Parent=MS.gene059030.t1 |
| chr1.2 | exon | 52196632 | 52196782 | 52196632 | ID=MS.gene059030.t1.exon6;Parent=MS.gene059030.t1 |
| chr1.2 | CDS | 52196632 | 52196782 | 52196632 | ID=cds.MS.gene059030.t1;Parent=MS.gene059030.t1 |
| chr1.2 | exon | 52196265 | 52196375 | 52196265 | ID=MS.gene059030.t1.exon7;Parent=MS.gene059030.t1 |
| chr1.2 | CDS | 52196265 | 52196375 | 52196265 | ID=cds.MS.gene059030.t1;Parent=MS.gene059030.t1 |
| chr1.2 | exon | 52196022 | 52196148 | 52196022 | ID=MS.gene059030.t1.exon8;Parent=MS.gene059030.t1 |
| chr1.2 | CDS | 52196022 | 52196148 | 52196022 | ID=cds.MS.gene059030.t1;Parent=MS.gene059030.t1 |
| chr1.2 | exon | 52195815 | 52195912 | 52195815 | ID=MS.gene059030.t1.exon9;Parent=MS.gene059030.t1 |
| chr1.2 | CDS | 52195815 | 52195912 | 52195815 | ID=cds.MS.gene059030.t1;Parent=MS.gene059030.t1 |
| chr1.2 | exon | 52195146 | 52195284 | 52195146 | ID=MS.gene059030.t1.exon10;Parent=MS.gene059030.t1 |
| chr1.2 | CDS | 52195146 | 52195284 | 52195146 | ID=cds.MS.gene059030.t1;Parent=MS.gene059030.t1 |
| chr1.2 | exon | 52194818 | 52194870 | 52194818 | ID=MS.gene059030.t1.exon11;Parent=MS.gene059030.t1 |
| chr1.2 | CDS | 52194818 | 52194870 | 52194818 | ID=cds.MS.gene059030.t1;Parent=MS.gene059030.t1 |
| chr1.2 | exon | 52194438 | 52194521 | 52194438 | ID=MS.gene059030.t1.exon12;Parent=MS.gene059030.t1 |
| chr1.2 | CDS | 52194438 | 52194521 | 52194438 | ID=cds.MS.gene059030.t1;Parent=MS.gene059030.t1 |
| Gene Sequence |
| Protein sequence |
