Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059739.t1 | XP_013464605.1 | 95.4 | 263 | 6 | 2 | 1 | 257 | 6 | 268 | 4.00E-134 | 487.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059739.t1 | Q9SF32 | 35.1 | 168 | 100 | 2 | 65 | 227 | 110 | 273 | 3.7e-19 | 97.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059739.t1 | A0A072VKF6 | 95.4 | 263 | 6 | 2 | 1 | 257 | 6 | 268 | 2.9e-134 | 487.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058206 | MS.gene059739 | 0.819829 | 9.46E-53 | -1.69E-46 |
| MS.gene058848 | MS.gene059739 | 0.817101 | 3.93E-52 | -1.69E-46 |
| MS.gene059739 | MS.gene060652 | 0.883762 | 3.41E-71 | -1.69E-46 |
| MS.gene059739 | MS.gene062598 | 0.82265 | 2.11E-53 | -1.69E-46 |
| MS.gene059739 | MS.gene58395 | 0.929116 | 1.10E-92 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059739.t1 | MTR_2g078210 | 93.891 | 311 | 9 | 3 | 1 | 301 | 6 | 316 | 0.0 | 592 |
| MS.gene059739.t1 | MTR_2g078210 | 95.312 | 256 | 8 | 1 | 50 | 301 | 1 | 256 | 0.0 | 504 |
| MS.gene059739.t1 | MTR_2g015370 | 49.071 | 269 | 117 | 5 | 1 | 261 | 1 | 257 | 1.37e-80 | 246 |
| MS.gene059739.t1 | MTR_4g050480 | 43.636 | 165 | 93 | 0 | 65 | 229 | 98 | 262 | 2.70e-34 | 129 |
| MS.gene059739.t1 | MTR_4g050480 | 43.636 | 165 | 93 | 0 | 65 | 229 | 99 | 263 | 2.71e-34 | 129 |
| MS.gene059739.t1 | MTR_1g095740 | 37.427 | 171 | 97 | 4 | 64 | 227 | 142 | 309 | 8.11e-30 | 118 |
| MS.gene059739.t1 | MTR_6g033415 | 36.517 | 178 | 102 | 4 | 57 | 227 | 101 | 274 | 1.01e-28 | 114 |
| MS.gene059739.t1 | MTR_1g066800 | 35.758 | 165 | 96 | 3 | 64 | 223 | 122 | 281 | 1.11e-26 | 109 |
| MS.gene059739.t1 | MTR_1g066800 | 35.260 | 173 | 102 | 3 | 56 | 223 | 109 | 276 | 1.20e-26 | 108 |
| MS.gene059739.t1 | MTR_7g100790 | 35.754 | 179 | 110 | 2 | 64 | 241 | 109 | 283 | 3.42e-25 | 105 |
| MS.gene059739.t1 | MTR_3g104570 | 36.872 | 179 | 103 | 5 | 65 | 234 | 93 | 270 | 1.18e-23 | 100 |
| MS.gene059739.t1 | MTR_4g087420 | 31.892 | 185 | 106 | 5 | 54 | 223 | 137 | 316 | 3.63e-20 | 90.9 |
| MS.gene059739.t1 | MTR_8g024540 | 31.183 | 186 | 102 | 8 | 63 | 229 | 127 | 305 | 8.47e-16 | 77.8 |
| MS.gene059739.t1 | MTR_8g017570 | 30.570 | 193 | 126 | 3 | 65 | 249 | 92 | 284 | 1.03e-14 | 74.3 |
| MS.gene059739.t1 | MTR_2g099780 | 32.370 | 173 | 107 | 3 | 65 | 227 | 80 | 252 | 6.47e-12 | 65.9 |
| MS.gene059739.t1 | MTR_1g007920 | 28.205 | 195 | 113 | 5 | 65 | 232 | 99 | 293 | 3.70e-11 | 63.9 |
| MS.gene059739.t1 | MTR_1g007920 | 28.205 | 195 | 113 | 5 | 65 | 232 | 124 | 318 | 5.38e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059739.t1 | AT3G15050 | 54.741 | 232 | 92 | 3 | 1 | 232 | 1 | 219 | 7.74e-82 | 248 |
| MS.gene059739.t1 | AT2G33990 | 49.500 | 200 | 96 | 3 | 65 | 261 | 49 | 246 | 3.46e-64 | 203 |
| MS.gene059739.t1 | AT3G22190 | 36.199 | 221 | 138 | 2 | 63 | 281 | 88 | 307 | 1.75e-32 | 124 |
| MS.gene059739.t1 | AT3G22190 | 36.199 | 221 | 138 | 2 | 63 | 281 | 88 | 307 | 1.75e-32 | 124 |
| MS.gene059739.t1 | AT3G22190 | 36.199 | 221 | 138 | 2 | 63 | 281 | 88 | 307 | 1.75e-32 | 124 |
| MS.gene059739.t1 | AT3G22190 | 36.199 | 221 | 138 | 2 | 63 | 281 | 88 | 307 | 1.75e-32 | 124 |
| MS.gene059739.t1 | AT2G26180 | 40.805 | 174 | 95 | 3 | 65 | 230 | 86 | 259 | 4.23e-31 | 120 |
| MS.gene059739.t1 | AT2G26410 | 35.882 | 170 | 100 | 4 | 65 | 228 | 150 | 316 | 6.69e-28 | 113 |
| MS.gene059739.t1 | AT2G26410 | 35.882 | 170 | 100 | 4 | 65 | 228 | 150 | 316 | 6.69e-28 | 113 |
| MS.gene059739.t1 | AT3G52290 | 35.057 | 174 | 108 | 3 | 56 | 227 | 101 | 271 | 1.57e-27 | 111 |
| MS.gene059739.t1 | AT5G03040 | 31.140 | 228 | 137 | 6 | 9 | 227 | 64 | 280 | 8.03e-27 | 109 |
| MS.gene059739.t1 | AT5G03040 | 31.140 | 228 | 137 | 6 | 9 | 227 | 64 | 280 | 8.03e-27 | 109 |
| MS.gene059739.t1 | AT5G03040 | 31.140 | 228 | 137 | 6 | 9 | 227 | 64 | 280 | 8.03e-27 | 109 |
| MS.gene059739.t1 | AT1G72670 | 30.952 | 210 | 133 | 4 | 31 | 230 | 57 | 264 | 4.82e-26 | 107 |
| MS.gene059739.t1 | AT3G09710 | 35.119 | 168 | 100 | 2 | 65 | 227 | 110 | 273 | 1.49e-25 | 105 |
| MS.gene059739.t1 | AT3G09710 | 33.516 | 182 | 98 | 4 | 65 | 227 | 110 | 287 | 6.45e-25 | 104 |
| MS.gene059739.t1 | AT3G59690 | 33.140 | 172 | 102 | 7 | 51 | 219 | 157 | 318 | 2.21e-23 | 100 |
| MS.gene059739.t1 | AT3G59690 | 33.140 | 172 | 102 | 7 | 51 | 219 | 157 | 318 | 2.21e-23 | 100 |
| MS.gene059739.t1 | AT1G17480 | 31.429 | 175 | 98 | 4 | 46 | 218 | 85 | 239 | 6.31e-22 | 94.7 |
| MS.gene059739.t1 | AT2G43680 | 32.044 | 181 | 91 | 8 | 51 | 219 | 310 | 470 | 2.60e-17 | 82.8 |
| MS.gene059739.t1 | AT2G43680 | 32.044 | 181 | 91 | 8 | 51 | 219 | 310 | 470 | 2.60e-17 | 82.8 |
| MS.gene059739.t1 | AT2G43680 | 32.044 | 181 | 91 | 8 | 51 | 219 | 310 | 470 | 2.60e-17 | 82.8 |
| MS.gene059739.t1 | AT2G43680 | 32.044 | 181 | 91 | 8 | 51 | 219 | 310 | 470 | 2.60e-17 | 82.8 |
| MS.gene059739.t1 | AT2G43680 | 32.044 | 181 | 91 | 8 | 51 | 219 | 311 | 471 | 2.70e-17 | 82.4 |
| MS.gene059739.t1 | AT3G49260 | 25.888 | 197 | 120 | 4 | 65 | 241 | 122 | 312 | 3.75e-17 | 82.0 |
| MS.gene059739.t1 | AT3G49260 | 25.888 | 197 | 120 | 4 | 65 | 241 | 122 | 312 | 3.75e-17 | 82.0 |
| MS.gene059739.t1 | AT3G49260 | 25.888 | 197 | 120 | 4 | 65 | 241 | 122 | 312 | 3.75e-17 | 82.0 |
| MS.gene059739.t1 | AT3G49260 | 26.263 | 198 | 119 | 4 | 65 | 241 | 122 | 313 | 5.02e-17 | 81.6 |
| MS.gene059739.t1 | AT4G00820 | 27.014 | 211 | 125 | 6 | 38 | 230 | 112 | 311 | 1.01e-15 | 77.8 |
| MS.gene059739.t1 | AT1G01110 | 24.775 | 222 | 144 | 7 | 28 | 230 | 86 | 303 | 1.35e-12 | 68.2 |
| MS.gene059739.t1 | AT4G10640 | 29.016 | 193 | 98 | 6 | 65 | 227 | 102 | 285 | 8.53e-11 | 62.8 |
Find 75 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGCATTTCGTTCATTTA+TGG | 0.156996 | 2.4:+20306794 | MS.gene059739:CDS |
| GCCGTTGAGTTTCTTTGTTT+TGG | 0.177224 | 2.4:-20309433 | None:intergenic |
| GTGGTTCATCTTATCTAATT+TGG | 0.248605 | 2.4:-20309469 | None:intergenic |
| GAAGAACATTTCAACATCTA+AGG | 0.257374 | 2.4:+20308785 | MS.gene059739:CDS |
| CCAAACTGTAACCAGTATTT+TGG | 0.272065 | 2.4:+20309309 | MS.gene059739:CDS |
| CAGCGCGTCCTTGGGAGGTT+CGG | 0.294645 | 2.4:+20309394 | MS.gene059739:CDS |
| GTTGGGTTGCAGCGCGTCCT+TGG | 0.318135 | 2.4:+20309385 | MS.gene059739:CDS |
| CTCCATCATCAAACCTTCAT+TGG | 0.319760 | 2.4:-20306721 | None:intergenic |
| CTAATTTGGTCTTCTGCTGC+TGG | 0.344502 | 2.4:-20309455 | None:intergenic |
| TGTTGTTCCTGTTTGGTCTC+TGG | 0.347194 | 2.4:-20308848 | None:intergenic |
| TGGAGAGGACAGTTCCTTCC+AGG | 0.372133 | 2.4:+20306739 | MS.gene059739:CDS |
| TTGGAGCTGGATGGAGCGTT+GGG | 0.373478 | 2.4:+20309368 | MS.gene059739:CDS |
| CCAAAATACTGGTTACAGTT+TGG | 0.386021 | 2.4:-20309309 | None:intergenic |
| GTTGGAGCTGGATGGAGCGT+TGG | 0.388313 | 2.4:+20309367 | MS.gene059739:CDS |
| CACTTAACTACATACATTCA+TGG | 0.393069 | 2.4:+20308869 | MS.gene059739:CDS |
| GGCATATGCTTTCTCTCATC+AGG | 0.394693 | 2.4:+20309205 | MS.gene059739:CDS |
| ACTAAAGCTGCCATGTCAAA+TGG | 0.395308 | 2.4:+20309525 | MS.gene059739:CDS |
| TTGGGTTGCAGCGCGTCCTT+GGG | 0.397902 | 2.4:+20309386 | MS.gene059739:CDS |
| GGTCAGGCTTCTTATAGCCT+TGG | 0.403857 | 2.4:+20309330 | MS.gene059739:CDS |
| AAGAAGCCTGACCAAAATAC+TGG | 0.421606 | 2.4:-20309320 | None:intergenic |
| AGTTAAGTGTTGTTCCTGTT+TGG | 0.425963 | 2.4:-20308855 | None:intergenic |
| CAAGAATGGGTCCAAAGAAA+TGG | 0.430866 | 2.4:+20306074 | None:intergenic |
| TTGATTCTTCATGAGGGCTA+TGG | 0.431764 | 2.4:-20306689 | None:intergenic |
| AGCGCGTCCTTGGGAGGTTC+GGG | 0.435357 | 2.4:+20309395 | MS.gene059739:CDS |
| AGGGCTATGGTTCCCATTGG+AGG | 0.450209 | 2.4:-20306676 | None:intergenic |
| TCCATCATCAAACCTTCATT+GGG | 0.455643 | 2.4:-20306720 | None:intergenic |
| GACATGGCAGCTTTAGTCAA+TGG | 0.463459 | 2.4:-20309519 | None:intergenic |
| AAGAAAGCTGGGGTTGGAGC+TGG | 0.466713 | 2.4:+20309355 | MS.gene059739:CDS |
| TTCTTCTCGCTGATGTATCC+TGG | 0.469935 | 2.4:-20309156 | None:intergenic |
| CAGGATTAAGCAAAAGAGAT+TGG | 0.472339 | 2.4:+20308945 | MS.gene059739:CDS |
| CTAAAGCTGCCATGTCAAAT+GGG | 0.486923 | 2.4:+20309526 | MS.gene059739:CDS |
| ATAGCCTTGGTAAAGAAAGC+TGG | 0.489924 | 2.4:+20309343 | MS.gene059739:CDS |
| ATGAGGGCTATGGTTCCCAT+TGG | 0.494385 | 2.4:-20306679 | None:intergenic |
| AAGAACATTTCAACATCTAA+GGG | 0.495562 | 2.4:+20308786 | MS.gene059739:CDS |
| GTGTTACTTGATTCTTCATG+AGG | 0.498076 | 2.4:-20306696 | None:intergenic |
| TAGCCTTGGTAAAGAAAGCT+GGG | 0.502264 | 2.4:+20309344 | MS.gene059739:CDS |
| TTCACAATATTGCTGCTACT+CGG | 0.514388 | 2.4:+20306766 | MS.gene059739:CDS |
| TTGGTAAAGAAAGCTGGGGT+TGG | 0.518496 | 2.4:+20309349 | MS.gene059739:CDS |
| AGATAAATCAAACCAAGAAA+AGG | 0.519572 | 2.4:+20306132 | MS.gene059739:CDS |
| AGTCTCCTTCGCATTTGACA+TGG | 0.526433 | 2.4:-20309586 | None:intergenic |
| TTATAATCAGAAGGAAGAAA+CGG | 0.527194 | 2.4:+20306104 | MS.gene059739:CDS |
| GGGCTATGGTTCCCATTGGA+GGG | 0.533590 | 2.4:-20306675 | None:intergenic |
| TCAAGTAACACTCCCAATGA+AGG | 0.535092 | 2.4:+20306708 | MS.gene059739:CDS |
| TCCCAATGAAGGTTTGATGA+TGG | 0.538229 | 2.4:+20306719 | MS.gene059739:CDS |
| CAATCTACTGAACCCTCCAA+TGG | 0.545908 | 2.4:+20306663 | MS.gene059739:CDS |
| GTGCAGCGGTTCTGAAACAA+TGG | 0.546419 | 2.4:+20309121 | MS.gene059739:CDS |
| AATCTACTGAACCCTCCAAT+GGG | 0.550183 | 2.4:+20306664 | MS.gene059739:CDS |
| GACATGGAAGCTTTAGCCAA+TGG | 0.551945 | 2.4:-20309570 | None:intergenic |
| GGTTGCAGCGCGTCCTTGGG+AGG | 0.553914 | 2.4:+20309389 | MS.gene059739:CDS |
| CACATGGCCAGAGACCAAAC+AGG | 0.554081 | 2.4:+20308841 | MS.gene059739:CDS |
| AATGCGAAGGAGACTGAGAA+AGG | 0.557321 | 2.4:+20309594 | MS.gene059739:CDS |
| GGTTTAAAATTATAATCAGA+AGG | 0.564252 | 2.4:+20306095 | MS.gene059739:CDS |
| ACTCTCCTTCCCATTTGACA+TGG | 0.564367 | 2.4:-20309535 | None:intergenic |
| AGCTTCCATGTCAAATGCGA+AGG | 0.566653 | 2.4:+20309581 | MS.gene059739:CDS |
| CAATGGAAGAGATACTATCC+AGG | 0.570614 | 2.4:+20309138 | MS.gene059739:CDS |
| CTGTTTGGTCTCTGGCCATG+TGG | 0.581097 | 2.4:-20308840 | None:intergenic |
| AGCTGCCATGTCAAATGGGA+AGG | 0.581376 | 2.4:+20309530 | MS.gene059739:CDS |
| TGTGTATGATAACAGCAGCC+AGG | 0.581859 | 2.4:+20308926 | MS.gene059739:CDS |
| AACCCCAGCTTTCTTTACCA+AGG | 0.586825 | 2.4:-20309347 | None:intergenic |
| ACTTGAACCCGAACCTCCCA+AGG | 0.587510 | 2.4:-20309402 | None:intergenic |
| AGCAATATTGTGAATCAACC+TGG | 0.594625 | 2.4:-20306757 | None:intergenic |
| TGAATGTATCCCAGGTGGAA+TGG | 0.600817 | 2.4:+20309099 | MS.gene059739:intron |
| GAGTGAAACAAAATCGCCAT+TGG | 0.608889 | 2.4:+20309554 | MS.gene059739:CDS |
| AGCTTTAATTCAAGACCACA+TGG | 0.613946 | 2.4:+20308825 | MS.gene059739:CDS |
| TGTTACTTGATTCTTCATGA+GGG | 0.616361 | 2.4:-20306695 | None:intergenic |
| ATGAAGGTTTGATGATGGAG+AGG | 0.619518 | 2.4:+20306724 | MS.gene059739:CDS |
| TCCCAGGTGGAATGGTGCAG+CGG | 0.626788 | 2.4:+20309107 | MS.gene059739:intron |
| AAGCTGGGGTTGGAGCTGGA+TGG | 0.631067 | 2.4:+20309359 | MS.gene059739:CDS |
| CCCAAAACAAAGAAACTCAA+CGG | 0.631804 | 2.4:+20309432 | MS.gene059739:CDS |
| ATGAGAGAAAGCATATGCCA+TGG | 0.645984 | 2.4:-20309201 | None:intergenic |
| GGCTAAGATTAATGAGCTCG+AGG | 0.646302 | 2.4:+20308987 | MS.gene059739:CDS |
| AATCAAACGAGAGCGAGCCA+TGG | 0.651456 | 2.4:+20309184 | MS.gene059739:CDS |
| ATATTGTGAATCAACCTGGA+AGG | 0.653405 | 2.4:-20306753 | None:intergenic |
| AGAACATTTCAACATCTAAG+GGG | 0.685065 | 2.4:+20308787 | MS.gene059739:CDS |
| AGCCTTGGTAAAGAAAGCTG+GGG | 0.695007 | 2.4:+20309345 | MS.gene059739:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAATCATTTGAATTAAG+AGG | - | chr2.4:20307818-20307837 | None:intergenic | 15.0% |
| !! | TATAATCATTTGAATTAAGA+GGG | - | chr2.4:20307817-20307836 | None:intergenic | 15.0% |
| !! | TGCATTAAATCAAATTTAAA+TGG | + | chr2.4:20308275-20308294 | MS.gene059739:intron | 15.0% |
| !!! | AACAAGTTATTTTAAATCAA+TGG | - | chr2.4:20307781-20307800 | None:intergenic | 15.0% |
| !!! | ATAATTTTAAACCATTTCTT+TGG | - | chr2.4:20306088-20306107 | None:intergenic | 15.0% |
| !! | AAAATTATCTGCCATATTAT+GGG | - | chr2.4:20308642-20308661 | None:intergenic | 20.0% |
| !! | AAAATTCTATTTCCTTTAAG+TGG | + | chr2.4:20307227-20307246 | MS.gene059739:intron | 20.0% |
| !! | AAAGTCATTATCAAAGTAAA+TGG | - | chr2.4:20308339-20308358 | None:intergenic | 20.0% |
| !! | AAATAAAGACATCATATCAA+AGG | - | chr2.4:20308198-20308217 | None:intergenic | 20.0% |
| !! | AATAAAGACATCATATCAAA+GGG | - | chr2.4:20308197-20308216 | None:intergenic | 20.0% |
| !! | AATAGAGATAACACTTTAAA+AGG | - | chr2.4:20309045-20309064 | None:intergenic | 20.0% |
| !! | ATAAAGTTCTATACTATCAA+AGG | + | chr2.4:20307365-20307384 | MS.gene059739:intron | 20.0% |
| !! | ATGAATGAAATACTTTGATA+TGG | + | chr2.4:20307416-20307435 | MS.gene059739:intron | 20.0% |
| !! | TAAAATTATCTGCCATATTA+TGG | - | chr2.4:20308643-20308662 | None:intergenic | 20.0% |
| !! | TGTGAAAATTGTAGTAAAAA+TGG | - | chr2.4:20306854-20306873 | None:intergenic | 20.0% |
| !! | TTTCAAACAGTTATAAAAGA+GGG | - | chr2.4:20308543-20308562 | None:intergenic | 20.0% |
| !!! | CAAACTTAGTATTTTCATAA+GGG | - | chr2.4:20307178-20307197 | None:intergenic | 20.0% |
| !!! | CTTAAAGTTTTTATTACTAC+TGG | + | chr2.4:20308414-20308433 | MS.gene059739:intron | 20.0% |
| !!! | GATTTAAAATAACTTGTTCA+AGG | + | chr2.4:20307783-20307802 | MS.gene059739:intron | 20.0% |
| !!! | GGTTTAAAATTATAATCAGA+AGG | + | chr2.4:20306095-20306114 | MS.gene059739:CDS | 20.0% |
| !!! | GTTTTAAATATCCCATAATA+TGG | + | chr2.4:20308628-20308647 | MS.gene059739:intron | 20.0% |
| !!! | TCAAATTTTGTTTTCAAGAA+AGG | - | chr2.4:20309257-20309276 | None:intergenic | 20.0% |
| !!! | TTCACTTTTTTTATTACTAC+TGG | + | chr2.4:20308380-20308399 | MS.gene059739:intron | 20.0% |
| !!! | TTTGCAAATTTTAAAGTTAG+AGG | - | chr2.4:20306184-20306203 | None:intergenic | 20.0% |
| ! | AAATGCATTTCGTTCATTTA+TGG | + | chr2.4:20306794-20306813 | MS.gene059739:CDS | 25.0% |
| ! | AAATTTGACTACTAATGTCA+AGG | + | chr2.4:20309269-20309288 | MS.gene059739:intron | 25.0% |
| ! | AACTTAAAGCAATTATGTTC+AGG | + | chr2.4:20308446-20308465 | MS.gene059739:intron | 25.0% |
| ! | AAGAACATTTCAACATCTAA+GGG | + | chr2.4:20308786-20308805 | MS.gene059739:CDS | 25.0% |
| ! | AAGTATAGAAAAACAGATGA+GGG | - | chr2.4:20308576-20308595 | None:intergenic | 25.0% |
| ! | ACTTGTGTAAAATCAATTGA+AGG | + | chr2.4:20307874-20307893 | MS.gene059739:intron | 25.0% |
| ! | AGATAAATCAAACCAAGAAA+AGG | + | chr2.4:20306132-20306151 | MS.gene059739:CDS | 25.0% |
| ! | CAAGCATTAATTTAATCCAA+CGG | - | chr2.4:20308122-20308141 | None:intergenic | 25.0% |
| ! | CCTGAAAGAAAATCTAAATT+AGG | - | chr2.4:20306239-20306258 | None:intergenic | 25.0% |
| ! | CTTTCAAACAGTTATAAAAG+AGG | - | chr2.4:20308544-20308563 | None:intergenic | 25.0% |
| ! | TAAGTATAGAAAAACAGATG+AGG | - | chr2.4:20308577-20308596 | None:intergenic | 25.0% |
| ! | TAGTTCAAAAAACCAAAGTT+AGG | - | chr2.4:20307009-20307028 | None:intergenic | 25.0% |
| ! | TTATAATCAGAAGGAAGAAA+CGG | + | chr2.4:20306104-20306123 | MS.gene059739:CDS | 25.0% |
| !! | AAATCGACATTTCTAAAGAT+AGG | - | chr2.4:20308674-20308693 | None:intergenic | 25.0% |
| !! | AACGAAAAGTACAAATTTGA+AGG | + | chr2.4:20306535-20306554 | MS.gene059739:intron | 25.0% |
| !! | AATCGACATTTCTAAAGATA+GGG | - | chr2.4:20308673-20308692 | None:intergenic | 25.0% |
| !! | ACGAAAAGTACAAATTTGAA+GGG | + | chr2.4:20306536-20306555 | MS.gene059739:intron | 25.0% |
| !! | AGATGAGCTTTTTAATCTTA+CGG | - | chr2.4:20306986-20307005 | None:intergenic | 25.0% |
| !! | ATAGTCATGTGTTTGTATTT+TGG | - | chr2.4:20307737-20307756 | None:intergenic | 25.0% |
| !! | CCTAATTTAGATTTTCTTTC+AGG | + | chr2.4:20306236-20306255 | MS.gene059739:intron | 25.0% |
| !! | GAATATTTTGTATTTCCTCA+AGG | + | chr2.4:20308311-20308330 | MS.gene059739:intron | 25.0% |
| !! | GCAAACTTAGTATTTTCATA+AGG | - | chr2.4:20307179-20307198 | None:intergenic | 25.0% |
| !! | TAGTCATGTGTTTGTATTTT+GGG | - | chr2.4:20307736-20307755 | None:intergenic | 25.0% |
| !! | TTAGTCAATGGTGATTTTAA+TGG | - | chr2.4:20309510-20309529 | None:intergenic | 25.0% |
| !!! | TAAGCATTGGATTAATCTAA+TGG | + | chr2.4:20307493-20307512 | MS.gene059739:intron | 25.0% |
| !!! | TAATTAACTTGTTGTCAAGA+AGG | - | chr2.4:20308600-20308619 | None:intergenic | 25.0% |
| !!! | TTAGGGTTTTAATATGTTCT+TGG | + | chr2.4:20306316-20306335 | MS.gene059739:intron | 25.0% |
| !!! | TTGATAATGACTTTAGAACA+TGG | + | chr2.4:20308345-20308364 | MS.gene059739:intron | 25.0% |
| !!! | TTTCTGTTTTAGTTGCATTA+GGG | + | chr2.4:20306299-20306318 | MS.gene059739:intron | 25.0% |
| !!! | TTTTCTGTTTTAGTTGCATT+AGG | + | chr2.4:20306298-20306317 | MS.gene059739:intron | 25.0% |
| AAAAAAAGTGAAGACACTAG+TGG | - | chr2.4:20308372-20308391 | None:intergenic | 30.0% | |
| AAATACTTTGATATGGCACA+CGG | + | chr2.4:20307423-20307442 | MS.gene059739:intron | 30.0% | |
| AACTAGACTATCACTAAAGA+AGG | - | chr2.4:20308253-20308272 | None:intergenic | 30.0% | |
| AGAACATTTCAACATCTAAG+GGG | + | chr2.4:20308787-20308806 | MS.gene059739:CDS | 30.0% | |
| ATATCTGCAAATCCAAATTG+CGG | - | chr2.4:20307919-20307938 | None:intergenic | 30.0% | |
| CACTTAACTACATACATTCA+TGG | + | chr2.4:20308869-20308888 | MS.gene059739:CDS | 30.0% | |
| CATGATTCCTTAACTACATA+GGG | + | chr2.4:20307099-20307118 | MS.gene059739:intron | 30.0% | |
| CGTTGGATTAAATTAATGCT+TGG | + | chr2.4:20308120-20308139 | MS.gene059739:intron | 30.0% | |
| GAAGAACATTTCAACATCTA+AGG | + | chr2.4:20308785-20308804 | MS.gene059739:CDS | 30.0% | |
| GGAAAGTCAGTTAAAAATTG+AGG | + | chr2.4:20308966-20308985 | MS.gene059739:CDS | 30.0% | |
| GTATATGTCATGAATATCGT+TGG | + | chr2.4:20307668-20307687 | MS.gene059739:intron | 30.0% | |
| GTGGTTCATCTTATCTAATT+TGG | - | chr2.4:20309472-20309491 | None:intergenic | 30.0% | |
| TAAAAATCGCGAAATGCATA+AGG | - | chr2.4:20306925-20306944 | None:intergenic | 30.0% | |
| TAGTTGACTAATGAGGATTT+GGG | + | chr2.4:20306261-20306280 | MS.gene059739:intron | 30.0% | |
| TCAAGAAAGGATAAATCAAG+TGG | - | chr2.4:20309244-20309263 | None:intergenic | 30.0% | |
| TGAATATCGTTGGAAACAAA+AGG | + | chr2.4:20307678-20307697 | MS.gene059739:intron | 30.0% | |
| TGGATTAATCTAATGGTTGA+TGG | + | chr2.4:20307500-20307519 | MS.gene059739:intron | 30.0% | |
| TGTGTAAAATCAATTGAAGG+AGG | + | chr2.4:20307877-20307896 | MS.gene059739:intron | 30.0% | |
| TTAGTGTAAACTTGATCCAA+CGG | + | chr2.4:20307050-20307069 | MS.gene059739:intron | 30.0% | |
| TTAGTTGACTAATGAGGATT+TGG | + | chr2.4:20306260-20306279 | MS.gene059739:intron | 30.0% | |
| ! | AAGACATTTTTACCTTGCTT+TGG | + | chr2.4:20306593-20306612 | MS.gene059739:intron | 30.0% |
| ! | AAGTTTTTCACCACTACTTT+TGG | - | chr2.4:20306474-20306493 | None:intergenic | 30.0% |
| ! | AATCTGAATTTGAGACCAAA+TGG | - | chr2.4:20307618-20307637 | None:intergenic | 30.0% |
| ! | AGACGAGTCATATATGTTTT+TGG | - | chr2.4:20306563-20306582 | None:intergenic | 30.0% |
| ! | ATCGACATTTCTAAAGATAG+GGG | - | chr2.4:20308672-20308691 | None:intergenic | 30.0% |
| ! | ATTTTTGCTTTAGTAGACGA+AGG | - | chr2.4:20307212-20307231 | None:intergenic | 30.0% |
| ! | CATGAGTTGACTAAAAAGTA+TGG | + | chr2.4:20306447-20306466 | MS.gene059739:intron | 30.0% |
| ! | GAAAGGAAAAAACCTTTTCT+TGG | - | chr2.4:20306147-20306166 | None:intergenic | 30.0% |
| ! | TAGTGGTGAAAAACTTTTGA+GGG | + | chr2.4:20306478-20306497 | MS.gene059739:intron | 30.0% |
| ! | TCTTTCAATTTTTCATCCGT+TGG | + | chr2.4:20308103-20308122 | MS.gene059739:intron | 30.0% |
| ! | TGTTACTTGATTCTTCATGA+GGG | - | chr2.4:20306698-20306717 | None:intergenic | 30.0% |
| ! | TTATGCATTTCGCGATTTTT+AGG | + | chr2.4:20306924-20306943 | MS.gene059739:intron | 30.0% |
| ! | TTTTCATAAGGGTTAAGCAT+AGG | - | chr2.4:20307167-20307186 | None:intergenic | 30.0% |
| !! | ATGGAGATTTTGTTTCATTG+TGG | - | chr2.4:20309491-20309510 | None:intergenic | 30.0% |
| !! | TAGGGTTGTTTTCTATTTTG+TGG | + | chr2.4:20308055-20308074 | MS.gene059739:intron | 30.0% |
| AAAAGCTCATCTCCTAACTT+TGG | + | chr2.4:20306994-20307013 | MS.gene059739:intron | 35.0% | |
| AAAGTATGGACCAAAAGTAG+TGG | + | chr2.4:20306461-20306480 | MS.gene059739:intron | 35.0% | |
| AAGAGAACAAGAAACAACAC+TGG | - | chr2.4:20306624-20306643 | None:intergenic | 35.0% | |
| AGAGTTGTTATGTCTTCTTC+CGG | - | chr2.4:20307945-20307964 | None:intergenic | 35.0% | |
| AGCAATATTGTGAATCAACC+TGG | - | chr2.4:20306760-20306779 | None:intergenic | 35.0% | |
| ATATTGTGAATCAACCTGGA+AGG | - | chr2.4:20306756-20306775 | None:intergenic | 35.0% | |
| ATGTCAAGGTAATATTGCAG+TGG | + | chr2.4:20309283-20309302 | MS.gene059739:intron | 35.0% | |
| CAACTTAACAAAGTGACATG+AGG | + | chr2.4:20307317-20307336 | MS.gene059739:intron | 35.0% | |
| CAATGGTTATCTTGATCACA+GGG | - | chr2.4:20307764-20307783 | None:intergenic | 35.0% | |
| CAGGATTAAGCAAAAGAGAT+TGG | + | chr2.4:20308945-20308964 | MS.gene059739:CDS | 35.0% | |
| CCATGATTCCTTAACTACAT+AGG | + | chr2.4:20307098-20307117 | MS.gene059739:intron | 35.0% | |
| CCCAAAACAAAGAAACTCAA+CGG | + | chr2.4:20309432-20309451 | MS.gene059739:CDS | 35.0% | |
| CCTATGTAGTTAAGGAATCA+TGG | - | chr2.4:20307101-20307120 | None:intergenic | 35.0% | |
| CTAGATTCCCTATGTAGTTA+AGG | - | chr2.4:20307109-20307128 | None:intergenic | 35.0% | |
| CTTAACTACATAGGGAATCT+AGG | + | chr2.4:20307107-20307126 | MS.gene059739:intron | 35.0% | |
| TCAAAGTAAATGGTACCTTG+AGG | - | chr2.4:20308329-20308348 | None:intergenic | 35.0% | |
| TCAATGGTTATCTTGATCAC+AGG | - | chr2.4:20307765-20307784 | None:intergenic | 35.0% | |
| TCCATCATCAAACCTTCATT+GGG | - | chr2.4:20306723-20306742 | None:intergenic | 35.0% | |
| TCTATGAGCTGTTAGTGTTA+GGG | + | chr2.4:20308037-20308056 | MS.gene059739:intron | 35.0% | |
| TGATTGCAAGGAAAGTTAGA+AGG | - | chr2.4:20307255-20307274 | None:intergenic | 35.0% | |
| TTCACAATATTGCTGCTACT+CGG | + | chr2.4:20306766-20306785 | MS.gene059739:CDS | 35.0% | |
| TTCTATGAGCTGTTAGTGTT+AGG | + | chr2.4:20308036-20308055 | MS.gene059739:intron | 35.0% | |
| TTGCAAACATGATGAGAGTT+TGG | + | chr2.4:20306197-20306216 | MS.gene059739:intron | 35.0% | |
| TTGGATTTGCAGATATGTAC+CGG | + | chr2.4:20307923-20307942 | MS.gene059739:intron | 35.0% | |
| TTTCCTTGCAATCATAGACA+TGG | + | chr2.4:20307261-20307280 | MS.gene059739:intron | 35.0% | |
| TTTGATGCAATCATACGATC+TGG | - | chr2.4:20307077-20307096 | None:intergenic | 35.0% | |
| ! | AGCTTTAATTCAAGACCACA+TGG | + | chr2.4:20308825-20308844 | MS.gene059739:CDS | 35.0% |
| ! | AGTTAAGTGTTGTTCCTGTT+TGG | - | chr2.4:20308858-20308877 | None:intergenic | 35.0% |
| ! | CAATCTCTTTTGCTTAATCC+TGG | - | chr2.4:20308947-20308966 | None:intergenic | 35.0% |
| ! | CCAAAATACTGGTTACAGTT+TGG | - | chr2.4:20309312-20309331 | None:intergenic | 35.0% |
| ! | CCAAACTGTAACCAGTATTT+TGG | + | chr2.4:20309309-20309328 | MS.gene059739:CDS | 35.0% |
| ! | GCTTGGATTTTATTGTTGAG+AGG | + | chr2.4:20308137-20308156 | MS.gene059739:intron | 35.0% |
| ! | GGATTTTATTGTTGAGAGGA+TGG | + | chr2.4:20308141-20308160 | MS.gene059739:intron | 35.0% |
| ! | GTAGTGGTGAAAAACTTTTG+AGG | + | chr2.4:20306477-20306496 | MS.gene059739:intron | 35.0% |
| !! | AGTTAGAAGGTACCACTTAA+AGG | - | chr2.4:20307242-20307261 | None:intergenic | 35.0% |
| !! | GTGTTACTTGATTCTTCATG+AGG | - | chr2.4:20306699-20306718 | None:intergenic | 35.0% |
| !! | TCAGGATTAGTTGACTAATG+AGG | + | chr2.4:20306254-20306273 | MS.gene059739:intron | 35.0% |
| !! | TTGTATTTTGGGTGCAGATA+GGG | - | chr2.4:20307725-20307744 | None:intergenic | 35.0% |
| !! | TTTGTATTTTGGGTGCAGAT+AGG | - | chr2.4:20307726-20307745 | None:intergenic | 35.0% |
| !!! | CCGTTGAGTTTCTTTGTTTT+GGG | - | chr2.4:20309435-20309454 | None:intergenic | 35.0% |
| !!! | CGTTGAGTTTCTTTGTTTTG+GGG | - | chr2.4:20309434-20309453 | None:intergenic | 35.0% |
| !!! | GTTGAGTTTCTTTGTTTTGG+GGG | - | chr2.4:20309433-20309452 | None:intergenic | 35.0% |
| AAAGACAGATTGAGAGGATC+CGG | + | chr2.4:20308169-20308188 | MS.gene059739:intron | 40.0% | |
| AAGAAGCCTGACCAAAATAC+TGG | - | chr2.4:20309323-20309342 | None:intergenic | 40.0% | |
| AATCTACTGAACCCTCCAAT+GGG | + | chr2.4:20306664-20306683 | MS.gene059739:CDS | 40.0% | |
| ACTAAAGCTGCCATGTCAAA+TGG | + | chr2.4:20309525-20309544 | MS.gene059739:CDS | 40.0% | |
| AGAACAAGAAACAACACTGG+AGG | - | chr2.4:20306621-20306640 | None:intergenic | 40.0% | |
| AGGACTGAAAAGAGAGAGAA+AGG | - | chr2.4:20306164-20306183 | None:intergenic | 40.0% | |
| CAATGGAAGAGATACTATCC+AGG | + | chr2.4:20309138-20309157 | MS.gene059739:CDS | 40.0% | |
| CCAATGCTTATGAATAGTGC+AGG | - | chr2.4:20307483-20307502 | None:intergenic | 40.0% | |
| CCTGCACTATTCATAAGCAT+TGG | + | chr2.4:20307480-20307499 | MS.gene059739:intron | 40.0% | |
| CTAAAGCTGCCATGTCAAAT+GGG | + | chr2.4:20309526-20309545 | MS.gene059739:CDS | 40.0% | |
| CTCCATCATCAAACCTTCAT+TGG | - | chr2.4:20306724-20306743 | None:intergenic | 40.0% | |
| GACATCATATCAAAGGGATC+CGG | - | chr2.4:20308191-20308210 | None:intergenic | 40.0% | |
| GAGAGAAAAGACAGATTGAG+AGG | + | chr2.4:20308163-20308182 | MS.gene059739:intron | 40.0% | |
| GAGTGAAACAAAATCGCCAT+TGG | + | chr2.4:20309554-20309573 | MS.gene059739:CDS | 40.0% | |
| TAAGATTAATGAGCTCGAGG+TGG | + | chr2.4:20308990-20309009 | MS.gene059739:intron | 40.0% | |
| TCAAGGTAATATTGCAGTGG+AGG | + | chr2.4:20309286-20309305 | MS.gene059739:intron | 40.0% | |
| TCAAGTAACACTCCCAATGA+AGG | + | chr2.4:20306708-20306727 | MS.gene059739:CDS | 40.0% | |
| TCCCAATGAAGGTTTGATGA+TGG | + | chr2.4:20306719-20306738 | MS.gene059739:CDS | 40.0% | |
| TCTAGACGTGTCTTCTTCTT+TGG | - | chr2.4:20308005-20308024 | None:intergenic | 40.0% | |
| TCTCTTAGCACTCTTTGAAC+AGG | + | chr2.4:20306638-20306657 | MS.gene059739:intron | 40.0% | |
| TGGAAGGGGAATTAAGTCAT+GGG | + | chr2.4:20308485-20308504 | MS.gene059739:intron | 40.0% | |
| TTCTTCTTGCCTGCATACAT+AGG | - | chr2.4:20308771-20308790 | None:intergenic | 40.0% | |
| TTGATTCTTCATGAGGGCTA+TGG | - | chr2.4:20306692-20306711 | None:intergenic | 40.0% | |
| TTGCCTGCATACATAGGTAT+GGG | - | chr2.4:20308765-20308784 | None:intergenic | 40.0% | |
| TTGGAAGGGGAATTAAGTCA+TGG | + | chr2.4:20308484-20308503 | MS.gene059739:intron | 40.0% | |
| ! | ACGTTTTGTGAATGTATCCC+AGG | + | chr2.4:20309091-20309110 | MS.gene059739:intron | 40.0% |
| ! | ATAGCCTTGGTAAAGAAAGC+TGG | + | chr2.4:20309343-20309362 | MS.gene059739:CDS | 40.0% |
| ! | ATGAGAGAAAGCATATGCCA+TGG | - | chr2.4:20309204-20309223 | None:intergenic | 40.0% |
| ! | GAATTTGAGACCAAATGGAG+CGG | - | chr2.4:20307613-20307632 | None:intergenic | 40.0% |
| ! | TAGCCTTGGTAAAGAAAGCT+GGG | + | chr2.4:20309344-20309363 | MS.gene059739:CDS | 40.0% |
| ! | TCATTGACTGCATGATTGCA+TGG | - | chr2.4:20306957-20306976 | None:intergenic | 40.0% |
| ! | TTTTGTGAATGTATCCCAGG+TGG | + | chr2.4:20309094-20309113 | MS.gene059739:intron | 40.0% |
| !! | ACAGCTCTCTGATTTTGGAA+GGG | + | chr2.4:20308470-20308489 | MS.gene059739:intron | 40.0% |
| !! | ATGAAGGTTTGATGATGGAG+AGG | + | chr2.4:20306724-20306743 | MS.gene059739:CDS | 40.0% |
| !! | GCCGTTGAGTTTCTTTGTTT+TGG | - | chr2.4:20309436-20309455 | None:intergenic | 40.0% |
| !!! | CTGTAACCAGTATTTTGGTC+AGG | + | chr2.4:20309314-20309333 | MS.gene059739:CDS | 40.0% |
| AACCCCAGCTTTCTTTACCA+AGG | - | chr2.4:20309350-20309369 | None:intergenic | 45.0% | |
| AATAGTGCAGGAGAGAGTGA+AGG | - | chr2.4:20307471-20307490 | None:intergenic | 45.0% | |
| AATCATACGATCTGGACCGT+TGG | - | chr2.4:20307069-20307088 | None:intergenic | 45.0% | |
| AATGCGAAGGAGACTGAGAA+AGG | + | chr2.4:20309594-20309613 | MS.gene059739:CDS | 45.0% | |
| ACTCTCCTTCCCATTTGACA+TGG | - | chr2.4:20309538-20309557 | None:intergenic | 45.0% | |
| AGAAGAAGACACGTCTAGAG+CGG | + | chr2.4:20308006-20308025 | MS.gene059739:intron | 45.0% | |
| AGCCTTGGTAAAGAAAGCTG+GGG | + | chr2.4:20309345-20309364 | MS.gene059739:CDS | 45.0% | |
| AGCTTCCATGTCAAATGCGA+AGG | + | chr2.4:20309581-20309600 | MS.gene059739:CDS | 45.0% | |
| AGTCTCCTTCGCATTTGACA+TGG | - | chr2.4:20309589-20309608 | None:intergenic | 45.0% | |
| AGTGAAGGAGAGAACACTGA+TGG | - | chr2.4:20307456-20307475 | None:intergenic | 45.0% | |
| CAATCTACTGAACCCTCCAA+TGG | + | chr2.4:20306663-20306682 | MS.gene059739:CDS | 45.0% | |
| CAGCCATGTCTATGATTGCA+AGG | - | chr2.4:20307267-20307286 | None:intergenic | 45.0% | |
| CTTGCCTGCATACATAGGTA+TGG | - | chr2.4:20308766-20308785 | None:intergenic | 45.0% | |
| GGCATATGCTTTCTCTCATC+AGG | + | chr2.4:20309205-20309224 | MS.gene059739:CDS | 45.0% | |
| GGCTAAGATTAATGAGCTCG+AGG | + | chr2.4:20308987-20309006 | MS.gene059739:CDS | 45.0% | |
| TGAATGTATCCCAGGTGGAA+TGG | + | chr2.4:20309099-20309118 | MS.gene059739:intron | 45.0% | |
| TGCCTGCATACATAGGTATG+GGG | - | chr2.4:20308764-20308783 | None:intergenic | 45.0% | |
| TGTGTATGATAACAGCAGCC+AGG | + | chr2.4:20308926-20308945 | MS.gene059739:CDS | 45.0% | |
| TGTTGTTCCTGTTTGGTCTC+TGG | - | chr2.4:20308851-20308870 | None:intergenic | 45.0% | |
| TTCTTCTCGCTGATGTATCC+TGG | - | chr2.4:20309159-20309178 | None:intergenic | 45.0% | |
| TTGAAGGAGGAACTGCTTTG+TGG | + | chr2.4:20307890-20307909 | MS.gene059739:intron | 45.0% | |
| TTGGTAAAGAAAGCTGGGGT+TGG | + | chr2.4:20309349-20309368 | MS.gene059739:CDS | 45.0% | |
| ! | CACAGCTCTCTGATTTTGGA+AGG | + | chr2.4:20308469-20308488 | MS.gene059739:intron | 45.0% |
| ! | CTAATTTGGTCTTCTGCTGC+TGG | - | chr2.4:20309458-20309477 | None:intergenic | 45.0% |
| ! | GACATGGAAGCTTTAGCCAA+TGG | - | chr2.4:20309573-20309592 | None:intergenic | 45.0% |
| ! | GACATGGCAGCTTTAGTCAA+TGG | - | chr2.4:20309522-20309541 | None:intergenic | 45.0% |
| !! | CAGCTCTCTGATTTTGGAAG+GGG | + | chr2.4:20308471-20308490 | MS.gene059739:intron | 45.0% |
| !! | TAATATACAAAAATAAAAAA+TGG | + | chr2.4:20307027-20307046 | MS.gene059739:intron | 5.0% |
| !!! | TTAAAAGATTATAATATTTT+GGG | + | chr2.4:20306369-20306388 | MS.gene059739:intron | 5.0% |
| !!! | TTTAAAAGATTATAATATTT+TGG | + | chr2.4:20306368-20306387 | MS.gene059739:intron | 5.0% |
| AATCAAACGAGAGCGAGCCA+TGG | + | chr2.4:20309184-20309203 | MS.gene059739:CDS | 50.0% | |
| AGCTGCCATGTCAAATGGGA+AGG | + | chr2.4:20309530-20309549 | MS.gene059739:CDS | 50.0% | |
| AGGAGAGAACACTGATGGAG+AGG | - | chr2.4:20307451-20307470 | None:intergenic | 50.0% | |
| ATGAGGGCTATGGTTCCCAT+TGG | - | chr2.4:20306682-20306701 | None:intergenic | 50.0% | |
| CGGTCATGTAGCAGAAGCTA+CGG | - | chr2.4:20307593-20307612 | None:intergenic | 50.0% | |
| GCCTGCATACATAGGTATGG+GGG | - | chr2.4:20308763-20308782 | None:intergenic | 50.0% | |
| GCTTTGTGGTCACCGCAATT+TGG | + | chr2.4:20307904-20307923 | MS.gene059739:intron | 50.0% | |
| GGTCAGGCTTCTTATAGCCT+TGG | + | chr2.4:20309330-20309349 | MS.gene059739:CDS | 50.0% | |
| TGCTACATGACCGCTCCATT+TGG | + | chr2.4:20307600-20307619 | MS.gene059739:intron | 50.0% | |
| ! | CAGGCACAGCTCTCTGATTT+TGG | + | chr2.4:20308465-20308484 | MS.gene059739:intron | 50.0% |
| !! | GTGCAGCGGTTCTGAAACAA+TGG | + | chr2.4:20309121-20309140 | MS.gene059739:CDS | 50.0% |
| AAGAAAGCTGGGGTTGGAGC+TGG | + | chr2.4:20309355-20309374 | MS.gene059739:CDS | 55.0% | |
| ACTTGAACCCGAACCTCCCA+AGG | - | chr2.4:20309405-20309424 | None:intergenic | 55.0% | |
| AGGGCTATGGTTCCCATTGG+AGG | - | chr2.4:20306679-20306698 | None:intergenic | 55.0% | |
| CACATGGCCAGAGACCAAAC+AGG | + | chr2.4:20308841-20308860 | MS.gene059739:CDS | 55.0% | |
| CTGTTTGGTCTCTGGCCATG+TGG | - | chr2.4:20308843-20308862 | None:intergenic | 55.0% | |
| GCCCCCATACCTATGTATGC+AGG | + | chr2.4:20308759-20308778 | MS.gene059739:intron | 55.0% | |
| GGGCTATGGTTCCCATTGGA+GGG | - | chr2.4:20306678-20306697 | None:intergenic | 55.0% | |
| TGGAGAGGACAGTTCCTTCC+AGG | + | chr2.4:20306739-20306758 | MS.gene059739:CDS | 55.0% | |
| ! | TTGGAGCTGGATGGAGCGTT+GGG | + | chr2.4:20309368-20309387 | MS.gene059739:CDS | 55.0% |
| !! | ACACTGGAGGTGCCAAAGCA+AGG | - | chr2.4:20306608-20306627 | None:intergenic | 55.0% |
| AACCGCTGCACCATTCCACC+TGG | - | chr2.4:20309112-20309131 | None:intergenic | 60.0% | |
| AAGCTGGGGTTGGAGCTGGA+TGG | + | chr2.4:20309359-20309378 | MS.gene059739:CDS | 60.0% | |
| ACCGCTGCACCATTCCACCT+GGG | - | chr2.4:20309111-20309130 | None:intergenic | 60.0% | |
| GTTGGAGCTGGATGGAGCGT+TGG | + | chr2.4:20309367-20309386 | MS.gene059739:CDS | 60.0% | |
| TCCCAGGTGGAATGGTGCAG+CGG | + | chr2.4:20309107-20309126 | MS.gene059739:intron | 60.0% | |
| ! | TTGGGTTGCAGCGCGTCCTT+GGG | + | chr2.4:20309386-20309405 | MS.gene059739:CDS | 60.0% |
| AGCGCGTCCTTGGGAGGTTC+GGG | + | chr2.4:20309395-20309414 | MS.gene059739:CDS | 65.0% | |
| CAGCGCGTCCTTGGGAGGTT+CGG | + | chr2.4:20309394-20309413 | MS.gene059739:CDS | 65.0% | |
| ! | GTTGGGTTGCAGCGCGTCCT+TGG | + | chr2.4:20309385-20309404 | MS.gene059739:CDS | 65.0% |
| GGTTGCAGCGCGTCCTTGGG+AGG | + | chr2.4:20309389-20309408 | MS.gene059739:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 20306079 | 20309635 | 20306079 | ID=MS.gene059739 |
| chr2.4 | mRNA | 20306079 | 20309635 | 20306079 | ID=MS.gene059739.t1;Parent=MS.gene059739 |
| chr2.4 | exon | 20306079 | 20306153 | 20306079 | ID=MS.gene059739.t1.exon1;Parent=MS.gene059739.t1 |
| chr2.4 | CDS | 20306079 | 20306153 | 20306079 | ID=cds.MS.gene059739.t1;Parent=MS.gene059739.t1 |
| chr2.4 | exon | 20306660 | 20306815 | 20306660 | ID=MS.gene059739.t1.exon2;Parent=MS.gene059739.t1 |
| chr2.4 | CDS | 20306660 | 20306815 | 20306660 | ID=cds.MS.gene059739.t1;Parent=MS.gene059739.t1 |
| chr2.4 | exon | 20308781 | 20309008 | 20308781 | ID=MS.gene059739.t1.exon3;Parent=MS.gene059739.t1 |
| chr2.4 | CDS | 20308781 | 20309008 | 20308781 | ID=cds.MS.gene059739.t1;Parent=MS.gene059739.t1 |
| chr2.4 | exon | 20309113 | 20309226 | 20309113 | ID=MS.gene059739.t1.exon4;Parent=MS.gene059739.t1 |
| chr2.4 | CDS | 20309113 | 20309226 | 20309113 | ID=cds.MS.gene059739.t1;Parent=MS.gene059739.t1 |
| chr2.4 | exon | 20309303 | 20309635 | 20309303 | ID=MS.gene059739.t1.exon5;Parent=MS.gene059739.t1 |
| chr2.4 | CDS | 20309303 | 20309635 | 20309303 | ID=cds.MS.gene059739.t1;Parent=MS.gene059739.t1 |
| Gene Sequence |
| Protein sequence |
