AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058206

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058206.t1 MTR_2g034680 98.193 166 3 0 1 166 1 166 1.17e-120 344
MS.gene058206.t1 MTR_2g034680 100.000 32 0 0 166 197 287 318 7.67e-13 66.2
MS.gene058206.t1 MTR_7g021640 72.500 160 42 1 7 166 13 170 2.43e-82 247
MS.gene058206.t1 MTR_1g105535 69.811 159 48 0 8 166 15 173 2.10e-80 242
MS.gene058206.t1 MTR_5g064330 59.211 76 30 1 45 120 16 90 4.12e-26 97.1
MS.gene058206.t1 MTR_8g074350 38.525 122 70 2 56 177 80 196 2.52e-20 87.0
MS.gene058206.t1 MTR_7g110780 34.426 122 77 2 56 177 36 154 1.86e-17 78.6
MS.gene058206.t1 MTR_3g118390 31.858 113 73 2 65 177 135 243 3.97e-13 67.4
MS.gene058206.t1 MTR_8g074330 34.513 113 69 2 65 177 89 196 2.12e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058206.t1 AT3G16920 83.673 147 24 0 21 167 57 203 1.42e-89 267
MS.gene058206.t1 AT3G16920 83.673 147 24 0 21 167 33 179 1.63e-89 266
MS.gene058206.t1 AT1G05850 68.125 160 50 1 7 166 12 170 3.05e-78 237
MS.gene058206.t1 AT1G05850 68.125 160 50 1 7 166 12 170 3.05e-78 237
MS.gene058206.t1 AT3G12500 36.885 122 73 2 56 177 86 203 5.15e-19 83.6
MS.gene058206.t1 AT1G02360 33.628 113 72 2 65 177 85 194 8.06e-16 74.7
MS.gene058206.t1 AT1G02360 33.628 113 72 2 65 177 91 200 8.61e-16 74.3
MS.gene058206.t1 AT1G02360 33.628 113 72 2 65 177 39 148 9.43e-16 73.9
MS.gene058206.t1 AT4G01700 33.628 113 72 2 65 177 47 156 1.24e-15 73.6

Find 49 sgRNAs with CRISPR-Local

Find 134 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGCACATGCTTCTGGATTT+TGG 0.066004 2.2:-54421057 MS.gene058206:CDS
GGTGGTTATGGGGTGGCTAC+TGG 0.204419 2.2:-54420078 MS.gene058206:CDS
CCTCTTGGATTTGGTACTTC+TGG 0.205257 2.2:-54420995 MS.gene058206:CDS
TCGAGAACAAATTCTCAAAT+TGG 0.234101 2.2:+54421095 None:intergenic
AATATTGTTTCAGGTGGTTA+TGG 0.269978 2.2:-54420090 MS.gene058206:intron
GATCCAACGGCACATGCTTC+TGG 0.270290 2.2:-54421064 MS.gene058206:CDS
CTTTATGAGCCTCTTGGATT+TGG 0.284586 2.2:-54421004 MS.gene058206:CDS
GTGGTTATGGGGTGGCTACT+GGG 0.358281 2.2:-54420077 MS.gene058206:CDS
TGGTTATGGGGTGGCTACTG+GGG 0.370044 2.2:-54420076 MS.gene058206:CDS
GCTGCACTTTATGAGCCTCT+TGG 0.400754 2.2:-54421010 MS.gene058206:CDS
ATGGGGCTTATGCTACAATA+AGG 0.414258 2.2:-54420043 MS.gene058206:CDS
GGTTATGGGGTGGCTACTGG+GGG 0.424621 2.2:-54420075 MS.gene058206:CDS
CTTGGATTTGGTACTTCTGG+TGG 0.426651 2.2:-54420992 MS.gene058206:CDS
GCACAAGAGAGAATTTCATT+AGG 0.427545 2.2:+54419415 None:intergenic
ATATTGTTTCAGGTGGTTAT+GGG 0.429063 2.2:-54420089 MS.gene058206:intron
AAAGAGGTTGCTGCTTTCCT+TGG 0.429315 2.2:-54420953 MS.gene058206:CDS
ATTGCAACAATATTAGTGAT+AGG 0.439273 2.2:-54421250 MS.gene058206:CDS
CTTCAAGTTGTTGAAGAAGA+AGG 0.457398 2.2:+54419361 None:intergenic
TTGAGAATTTGTTCTCGAAA+CGG 0.470513 2.2:-54421090 MS.gene058206:CDS
CCATTGGTGAAAACAGTAAA+GGG 0.473968 2.2:-54421205 MS.gene058206:CDS
GCTGCTTTCCTTGGTCATGT+TGG 0.489882 2.2:-54420944 MS.gene058206:CDS
TCATCACAATAGAATTGATC+AGG 0.492401 2.2:+54420012 None:intergenic
GCCATTGGTGAAAACAGTAA+AGG 0.508561 2.2:-54421206 MS.gene058206:CDS
TAGCATAAGCCCCATGCAAA+GGG 0.509206 2.2:+54420051 None:intergenic
TATCACTAATATTGTTGCAA+TGG 0.516493 2.2:+54421252 None:intergenic
TATTGTTTCAGGTGGTTATG+GGG 0.516864 2.2:-54420088 MS.gene058206:intron
TTAACCTATCCATGTAGTCC+TGG 0.535696 2.2:-54419979 MS.gene058206:intron
ATTAGGAGTTGGTAGAGAAG+AGG 0.537611 2.2:-54419443 MS.gene058206:intron
TATGCTGCACCAGGACTACA+TGG 0.539685 2.2:+54419970 None:intergenic
TGTTTCAGGTGGTTATGGGG+TGG 0.542192 2.2:-54420085 MS.gene058206:intron
GGAGTTGGTAGAGAAGAGGC+AGG 0.547951 2.2:-54419439 MS.gene058206:CDS
GGAAAGAAACTATGTGACAA+AGG 0.557916 2.2:-54421184 MS.gene058206:CDS
AGAAACTATGTGACAAAGGG+TGG 0.568667 2.2:-54421180 MS.gene058206:CDS
GAAAGAAACTATGTGACAAA+GGG 0.573194 2.2:-54421183 MS.gene058206:CDS
GGTACTTCTGGTGGAAAGCA+TGG 0.578987 2.2:-54420983 MS.gene058206:CDS
AATCCAGAAGCATGTGCCGT+TGG 0.586749 2.2:+54421061 None:intergenic
GTAGCATAAGCCCCATGCAA+AGG 0.591881 2.2:+54420050 None:intergenic
AAAGCATGGTGGTCAGAAAG+AGG 0.601879 2.2:-54420969 MS.gene058206:CDS
GAAACTATGTGACAAAGGGT+GGG 0.610521 2.2:-54421179 MS.gene058206:CDS
GAAGAAGAAGGTGAGCCAGT+TGG 0.610682 2.2:+54419373 None:intergenic
ACAAACATCAGTGAAGCCAT+TGG 0.621601 2.2:-54421221 MS.gene058206:CDS
AAGGGTGGGAATGTAAAGGT+TGG 0.625286 2.2:-54421165 MS.gene058206:CDS
CTCGAAACGGAATGATCCAA+CGG 0.641016 2.2:-54421077 MS.gene058206:CDS
GAGTTGGTAGAGAAGAGGCA+GGG 0.664610 2.2:-54419438 MS.gene058206:CDS
GACAAAGGGTGGGAATGTAA+AGG 0.668253 2.2:-54421169 MS.gene058206:CDS
TCTTGCTTCCAACATGACCA+AGG 0.673449 2.2:+54420936 None:intergenic
TGCACCAGGACTACATGGAT+AGG 0.675927 2.2:+54419975 None:intergenic
CCAGAAGTACCAAATCCAAG+AGG 0.703394 2.2:+54420995 None:intergenic
ACTTCTGGTGGAAAGCATGG+TGG 0.730500 2.2:-54420980 MS.gene058206:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GGAAAAATAATGAATTATAT+AGG - chr2.2:54420460-54420479 MS.gene058206:intron 15.0%
!!! TTATGTTTTTTAGTTCATTA+TGG - chr2.2:54419895-54419914 MS.gene058206:intron 15.0%
!!! TTTAAGATGATAAAATTGTA+AGG - chr2.2:54420526-54420545 MS.gene058206:intron 15.0%
!! AAATGTGAATACCAATAAAT+AGG + chr2.2:54420721-54420740 None:intergenic 20.0%
!! AAGATGTTATATTATTAGAG+TGG - chr2.2:54420491-54420510 MS.gene058206:intron 20.0%
!! AATTACAACTATGGAAAAAT+TGG - chr2.2:54420886-54420905 MS.gene058206:intron 20.0%
!! ACCATATAAAACATTTATTG+TGG + chr2.2:54421106-54421125 None:intergenic 20.0%
!! ATAAAATGATCAATTCATGT+GGG - chr2.2:54419791-54419810 MS.gene058206:intron 20.0%
!! ATTACAACTATGGAAAAATT+GGG - chr2.2:54420887-54420906 MS.gene058206:intron 20.0%
!! CTTTATTACCTTGATTTATT+AGG - chr2.2:54421186-54421205 MS.gene058206:CDS 20.0%
!! TAATAGAAAAAATGTCCATT+TGG + chr2.2:54419373-54419392 None:intergenic 20.0%
!! TATAAAATGATCAATTCATG+TGG - chr2.2:54419790-54419809 MS.gene058206:intron 20.0%
!!! ACACACACAATTTTTTTTTT+CGG - chr2.2:54420170-54420189 MS.gene058206:intron 20.0%
! AATAACAGGAATTACAACTA+TGG - chr2.2:54420877-54420896 MS.gene058206:intron 25.0%
! ATTGCAACAATATTAGTGAT+AGG - chr2.2:54419396-54419415 MS.gene058206:CDS 25.0%
! GTTGTAATTCCTGTTATTAA+AGG + chr2.2:54420875-54420894 None:intergenic 25.0%
! TAAAATGATCAATTCATGTG+GGG - chr2.2:54419792-54419811 MS.gene058206:intron 25.0%
! TATCACTAATATTGTTGCAA+TGG + chr2.2:54419397-54419416 None:intergenic 25.0%
! TGAATACCAATAAATAGGTA+TGG + chr2.2:54420716-54420735 None:intergenic 25.0%
! TGTTATATTATTAGAGTGGT+TGG - chr2.2:54420495-54420514 MS.gene058206:intron 25.0%
! TTACAACTATGGAAAAATTG+GGG - chr2.2:54420888-54420907 MS.gene058206:intron 25.0%
!! AACTCATGGTAAAAAAGTAT+AGG + chr2.2:54420285-54420304 None:intergenic 25.0%
!! ACCAAACAACTTCAAATTTT+TGG - chr2.2:54420398-54420417 MS.gene058206:intron 25.0%
!! ACTCATGGTAAAAAAGTATA+GGG + chr2.2:54420284-54420303 None:intergenic 25.0%
!! CATTTGATGATTCATAGATT+TGG - chr2.2:54420000-54420019 MS.gene058206:CDS 25.0%
!! GCCACAATAAATGTTTTATA+TGG - chr2.2:54421102-54421121 MS.gene058206:CDS 25.0%
!! TCCAAAAATTTGAAGTTGTT+TGG + chr2.2:54420402-54420421 None:intergenic 25.0%
!!! ATGATGTTTTTGTTGGAAAT+TGG - chr2.2:54421031-54421050 MS.gene058206:CDS 25.0%
!!! TTTTTTACCATGAGTTGTAT+AGG - chr2.2:54420289-54420308 MS.gene058206:intron 25.0%
AAAATGACACATTGTCCAAA+AGG - chr2.2:54421064-54421083 MS.gene058206:CDS 30.0%
AAAATGATCAATTCATGTGG+GGG - chr2.2:54419793-54419812 MS.gene058206:intron 30.0%
AAATGACACATTGTCCAAAA+GGG - chr2.2:54421065-54421084 MS.gene058206:CDS 30.0%
AACGTGATCAATTCATTTAG+GGG - chr2.2:54419850-54419869 MS.gene058206:intron 30.0%
AGAACGTGATCAATTCATTT+AGG - chr2.2:54419848-54419867 MS.gene058206:intron 30.0%
ATTGAATTGTGACTTACAAG+AGG + chr2.2:54419736-54419755 None:intergenic 30.0%
CATAGAACAAAATGCAACAT+TGG - chr2.2:54420948-54420967 MS.gene058206:CDS 30.0%
GAAAGAAACTATGTGACAAA+GGG - chr2.2:54419463-54419482 MS.gene058206:intron 30.0%
GAACGTGATCAATTCATTTA+GGG - chr2.2:54419849-54419868 MS.gene058206:intron 30.0%
GGTTCTTGAAATATTGTTTC+AGG - chr2.2:54420547-54420566 MS.gene058206:intron 30.0%
GTCAAATATCATGCAATTGA+GGG + chr2.2:54419921-54419940 None:intergenic 30.0%
GTTTAATAGATCCACTTTCA+AGG + chr2.2:54420917-54420936 None:intergenic 30.0%
TACCAACTCCTAATAAATCA+AGG + chr2.2:54421197-54421216 None:intergenic 30.0%
TACCTTGATTTATTAGGAGT+TGG - chr2.2:54421192-54421211 MS.gene058206:CDS 30.0%
TCATCACAATAGAATTGATC+AGG + chr2.2:54420637-54420656 None:intergenic 30.0%
TCCTATACAAAAACCAAGTT+TGG + chr2.2:54420443-54420462 None:intergenic 30.0%
TCGAGAACAAATTCTCAAAT+TGG + chr2.2:54419554-54419573 None:intergenic 30.0%
TCTTGAAATATTGTTTCAGG+TGG - chr2.2:54420550-54420569 MS.gene058206:intron 30.0%
TGTCAAATATCATGCAATTG+AGG + chr2.2:54419922-54419941 None:intergenic 30.0%
TTCTTGATGCCTTTAATAAC+AGG - chr2.2:54420863-54420882 MS.gene058206:intron 30.0%
TTTCCAACAAAAACATCATG+TGG + chr2.2:54421030-54421049 None:intergenic 30.0%
TTTGTTCTATGTATTCTGGA+TGG + chr2.2:54420939-54420958 None:intergenic 30.0%
! AATATTGTTTCAGGTGGTTA+TGG - chr2.2:54420556-54420575 MS.gene058206:intron 30.0%
! ATATTGTTTCAGGTGGTTAT+GGG - chr2.2:54420557-54420576 MS.gene058206:intron 30.0%
! GCATTTTGTTCTATGTATTC+TGG + chr2.2:54420943-54420962 None:intergenic 30.0%
! GTAAAAAAGTATAGGGACAT+TGG + chr2.2:54420277-54420296 None:intergenic 30.0%
! TTGAGAATTTGTTCTCGAAA+CGG - chr2.2:54419556-54419575 MS.gene058206:intron 30.0%
!! ACCAAACTTGGTTTTTGTAT+AGG - chr2.2:54420439-54420458 MS.gene058206:intron 30.0%
!!! GACAATGTGTCATTTTTTGT+TGG + chr2.2:54421060-54421079 None:intergenic 30.0%
AAACAAGTAATGAGTCTCAG+TGG + chr2.2:54420794-54420813 None:intergenic 35.0%
ACAAAAACATCATGTGGTGA+AGG + chr2.2:54421024-54421043 None:intergenic 35.0%
ATTGTGTGTGTGTTGAGATA+TGG + chr2.2:54420161-54420180 None:intergenic 35.0%
CCATTGGTGAAAACAGTAAA+GGG - chr2.2:54419441-54419460 MS.gene058206:CDS 35.0%
GCACAAGAGAGAATTTCATT+AGG + chr2.2:54421234-54421253 None:intergenic 35.0%
GGAAAGAAACTATGTGACAA+AGG - chr2.2:54419462-54419481 MS.gene058206:intron 35.0%
GTCAGGACATCGATAATTAT+TGG + chr2.2:54420104-54420123 None:intergenic 35.0%
GTTGAGATATGGATCATTTG+TGG + chr2.2:54420150-54420169 None:intergenic 35.0%
TTGCTTCATTATCAGAACCT+TGG + chr2.2:54421143-54421162 None:intergenic 35.0%
! GTTTTGTCCTATACAACTCA+TGG + chr2.2:54420299-54420318 None:intergenic 35.0%
! TATTGTTTCAGGTGGTTATG+GGG - chr2.2:54420558-54420577 MS.gene058206:intron 35.0%
!! TCACCACATGATGTTTTTGT+TGG - chr2.2:54421024-54421043 MS.gene058206:CDS 35.0%
AATAAATAGGTATGGCGCCA+CGG + chr2.2:54420708-54420727 None:intergenic 40.0%
ACAAACATCAGTGAAGCCAT+TGG - chr2.2:54419425-54419444 MS.gene058206:CDS 40.0%
AGAAACTATGTGACAAAGGG+TGG - chr2.2:54419466-54419485 MS.gene058206:intron 40.0%
ATGGGGCTTATGCTACAATA+AGG - chr2.2:54420603-54420622 MS.gene058206:intron 40.0%
CTTTATGAGCCTCTTGGATT+TGG - chr2.2:54419642-54419661 MS.gene058206:intron 40.0%
GAAACTATGTGACAAAGGGT+GGG - chr2.2:54419467-54419486 MS.gene058206:intron 40.0%
GCATCAAGAAAGACAACGTA+AGG + chr2.2:54420853-54420872 None:intergenic 40.0%
GCCATTGGTGAAAACAGTAA+AGG - chr2.2:54419440-54419459 MS.gene058206:CDS 40.0%
TAGCGCTTATACACCAAACT+TGG - chr2.2:54420427-54420446 MS.gene058206:intron 40.0%
TTAACCTATCCATGTAGTCC+TGG - chr2.2:54420667-54420686 MS.gene058206:intron 40.0%
TTTATTGTGGCACCAAATCC+AGG + chr2.2:54421093-54421112 None:intergenic 40.0%
TTTCAGTCATTCACGTAGTC+AGG + chr2.2:54420121-54420140 None:intergenic 40.0%
! CCCTTTACTGTTTTCACCAA+TGG + chr2.2:54419444-54419463 None:intergenic 40.0%
!! ATTAGGAGTTGGTAGAGAAG+AGG - chr2.2:54421203-54421222 MS.gene058206:CDS 40.0%
!! GAAGGTATGTGTTTTTCTGG+TGG + chr2.2:54421006-54421025 None:intergenic 40.0%
!! GGTGAAGGTATGTGTTTTTC+TGG + chr2.2:54421009-54421028 None:intergenic 40.0%
!! TTCGGTTCTAAAGAGTCAAG+CGG - chr2.2:54420188-54420207 MS.gene058206:intron 40.0%
!!! CAAGCTGCTTTTAAACCAAC+TGG - chr2.2:54421258-54421277 MS.gene058206:CDS 40.0%
AAAGCATGGTGGTCAGAAAG+AGG - chr2.2:54419677-54419696 MS.gene058206:intron 45.0%
AAGGGTGGGAATGTAAAGGT+TGG - chr2.2:54419481-54419500 MS.gene058206:intron 45.0%
AATTGGGGAAGCCTTGAAAG+TGG - chr2.2:54420903-54420922 MS.gene058206:intron 45.0%
CTCGAAACGGAATGATCCAA+CGG - chr2.2:54419569-54419588 MS.gene058206:intron 45.0%
GACAAAGGGTGGGAATGTAA+AGG - chr2.2:54419477-54419496 MS.gene058206:intron 45.0%
GGTGATCAAGTTTGTGACCA+AGG - chr2.2:54421123-54421142 MS.gene058206:CDS 45.0%
GTGGCGCCATACCTATTTAT+TGG - chr2.2:54420707-54420726 MS.gene058206:intron 45.0%
TAATGAGTCTCAGTGGAACG+TGG + chr2.2:54420787-54420806 None:intergenic 45.0%
TAGCATAAGCCCCATGCAAA+GGG + chr2.2:54420598-54420617 None:intergenic 45.0%
TCCAAGCAGCACTATGGAAA+TGG - chr2.2:54420974-54420993 MS.gene058206:CDS 45.0%
TCTTGCTTCCAACATGACCA+AGG + chr2.2:54419713-54419732 None:intergenic 45.0%
! ACCAAATCCAGGTACCCTTT+TGG + chr2.2:54421082-54421101 None:intergenic 45.0%
! CCTCTTGGATTTGGTACTTC+TGG - chr2.2:54419651-54419670 MS.gene058206:intron 45.0%
! CTTGGATTTGGTACTTCTGG+TGG - chr2.2:54419654-54419673 MS.gene058206:intron 45.0%
! GGCACATGCTTCTGGATTTT+GGG - chr2.2:54419590-54419609 MS.gene058206:intron 45.0%
! TCCATTTCCATAGTGCTGCT+TGG + chr2.2:54420978-54420997 None:intergenic 45.0%
!! AAAGAGGTTGCTGCTTTCCT+TGG - chr2.2:54419693-54419712 MS.gene058206:intron 45.0%
!! ACATTGTCCAAAAGGGTACC+TGG - chr2.2:54421072-54421091 MS.gene058206:CDS 45.0%
!! CCAGAAGTACCAAATCCAAG+AGG + chr2.2:54419654-54419673 None:intergenic 45.0%
!! TCCAAAAGGGTACCTGGATT+TGG - chr2.2:54421078-54421097 MS.gene058206:CDS 45.0%
!! TTTCCATAGTGCTGCTTGGA+AGG + chr2.2:54420974-54420993 None:intergenic 45.0%
AGTCCTGGTGCAGCATACTA+TGG - chr2.2:54420682-54420701 MS.gene058206:intron 50.0%
GAAGAAGAAGGTGAGCCAGT+TGG + chr2.2:54421276-54421295 None:intergenic 50.0%
GCTGCACTTTATGAGCCTCT+TGG - chr2.2:54419636-54419655 MS.gene058206:intron 50.0%
GGTACTTCTGGTGGAAAGCA+TGG - chr2.2:54419663-54419682 MS.gene058206:intron 50.0%
GTAGCATAAGCCCCATGCAA+AGG + chr2.2:54420599-54420618 None:intergenic 50.0%
TATGCTGCACCAGGACTACA+TGG + chr2.2:54420679-54420698 None:intergenic 50.0%
TGCACCAGGACTACATGGAT+AGG + chr2.2:54420674-54420693 None:intergenic 50.0%
! AATCCAGAAGCATGTGCCGT+TGG + chr2.2:54419588-54419607 None:intergenic 50.0%
! ACTTCTGGTGGAAAGCATGG+TGG - chr2.2:54419666-54419685 MS.gene058206:intron 50.0%
! CGGCACATGCTTCTGGATTT+TGG - chr2.2:54419589-54419608 MS.gene058206:intron 50.0%
! GCTGCTTTCCTTGGTCATGT+TGG - chr2.2:54419702-54419721 MS.gene058206:intron 50.0%
! TGTTTCAGGTGGTTATGGGG+TGG - chr2.2:54420561-54420580 MS.gene058206:intron 50.0%
!! GAGTTGGTAGAGAAGAGGCA+GGG - chr2.2:54421208-54421227 MS.gene058206:CDS 50.0%
GATCCAACGGCACATGCTTC+TGG - chr2.2:54419582-54419601 MS.gene058206:intron 55.0%
GTGGTTATGGGGTGGCTACT+GGG - chr2.2:54420569-54420588 MS.gene058206:intron 55.0%
TACTGGGGGACCCTTTGCAT+GGG - chr2.2:54420585-54420604 MS.gene058206:intron 55.0%
TGGCCTTCCAAGCAGCACTA+TGG - chr2.2:54420968-54420987 MS.gene058206:CDS 55.0%
TGGTTATGGGGTGGCTACTG+GGG - chr2.2:54420570-54420589 MS.gene058206:intron 55.0%
!! GGAGTTGGTAGAGAAGAGGC+AGG - chr2.2:54421207-54421226 MS.gene058206:CDS 55.0%
ACTGGGGGACCCTTTGCATG+GGG - chr2.2:54420586-54420605 MS.gene058206:intron 60.0%
CGGCCATAGTATGCTGCACC+AGG + chr2.2:54420688-54420707 None:intergenic 60.0%
CTACTGGGGGACCCTTTGCA+TGG - chr2.2:54420584-54420603 MS.gene058206:intron 60.0%
GGTGCAGCATACTATGGCCG+TGG - chr2.2:54420688-54420707 MS.gene058206:intron 60.0%
GGTGGTTATGGGGTGGCTAC+TGG - chr2.2:54420568-54420587 MS.gene058206:intron 60.0%
GGTTATGGGGTGGCTACTGG+GGG - chr2.2:54420571-54420590 MS.gene058206:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 54419363 54421305 54419363 ID=MS.gene058206
chr2.2 mRNA 54419363 54421305 54419363 ID=MS.gene058206.t1;Parent=MS.gene058206
chr2.2 exon 54420930 54421305 54420930 ID=MS.gene058206.t1.exon1;Parent=MS.gene058206.t1
chr2.2 CDS 54420930 54421305 54420930 ID=cds.MS.gene058206.t1;Parent=MS.gene058206.t1
chr2.2 exon 54419980 54420099 54419980 ID=MS.gene058206.t1.exon2;Parent=MS.gene058206.t1
chr2.2 CDS 54419980 54420099 54419980 ID=cds.MS.gene058206.t1;Parent=MS.gene058206.t1
chr2.2 exon 54419363 54419460 54419363 ID=MS.gene058206.t1.exon3;Parent=MS.gene058206.t1
chr2.2 CDS 54419363 54419460 54419363 ID=cds.MS.gene058206.t1;Parent=MS.gene058206.t1
Gene Sequence

>MS.gene058206

ATGAATTCCAAATGGACATTTTTTCTATTAGCCATTGCAACAATATTAGTGATAGGAAATGCACAAACATCAGTGAAGCCATTGGTGAAAACAGTAAAGGGAAAGAAACTATGTGACAAAGGGTGGGAATGTAAAGGTTGGTCAGTGTATTGTTGCAATGAGACTATATCTGATTATTTTCATACATACCAATTTGAGAATTTGTTCTCGAAACGGAATGATCCAACGGCACATGCTTCTGGATTTTGGGACTATCGTTCTTTTATTACTGCTGCTGCACTTTATGAGCCTCTTGGATTTGGTACTTCTGGTGGAAAGCATGGTGGTCAGAAAGAGGTTGCTGCTTTCCTTGGTCATGTTGGAAGCAAGACCTCTTGTAAGTCACAATTCAATGTTTTTGTTTATTTATGTTATGAAATAGTTTTTTTATAAAATGATCAATTCATGTGGGGGACAAAATTAAATTTTTATTGATCTTATGTTTTAGAACGTGATCAATTCATTTAGGGGACAAGTTAACTCTTTCTTGATCTTATGTTTTTTAGTTCATTATGGCCCTCAATTGCATGATATTTGACATTTTAAGTAAGATATAGTTAGATTTGTTGATTAATTTGTTTTATACATATCTTTGAATCATTTGATGATTCATAGATTTGGATTTCATATACAGTAAAATTTCAAACTCAGAATTTTAGAGTTAAAAAGAAACAAAACACGATTGTTTTCAAACTCGATCCAATAATTATCGATGTCCTGACTACGTGAATGACTGAAATTGTAACCACAAATGATCCATATCTCAACACACACACAATTTTTTTTTTCGGTTCTAAAGAGTCAAGCGGCGTCTCACACACTAAGTGCTGAAAAGTAGAGAATTGCATATTAAAATCTACGTCACATCATATCCAATGTCCCTATACTTTTTTACCATGAGTTGTATAGGACAAAACAAATCAACTTAGTTTACATTAAGATTTCAAAAATCTCAATATTAAAATATATCATATACTATTCATTATCTAAATATTGACCAAACAACTTCAAATTTTTGGATCTGTTAGCGCTTATACACCAAACTTGGTTTTTGTATAGGAAAAATAATGAATTATATAGGTGAAATTAAAGATGTTATATTATTAGAGTGGTTGGATATTTATTTTAAGATGATAAAATTGTAAGGTTCTTGAAATATTGTTTCAGGTGGTTATGGGGTGGCTACTGGGGGACCCTTTGCATGGGGCTTATGCTACAATAAGGAATTGAGTCCTGATCAATTCTATTGTGATGACTACTACAAATTAACCTATCCATGTAGTCCTGGTGCAGCATACTATGGCCGTGGCGCCATACCTATTTATTGGTATTCACATTTTGATTTTTTCTTGAAATATTTCATATTTTACGTGATCTTGCTGCCACGTTCCACTGAGACTCATTACTTGTTTCGAATCGTCTATAAAAGAAGTATTTATGACAAAAATCCTTACGTTGTCTTTCTTGATGCCTTTAATAACAGGAATTACAACTATGGAAAAATTGGGGAAGCCTTGAAAGTGGATCTATTAAACCATCCAGAATACATAGAACAAAATGCAACATTGGCCTTCCAAGCAGCACTATGGAAATGGATGACACCACCAGAAAAACACATACCTTCACCACATGATGTTTTTGTTGGAAATTGGAAACCAACAAAAAATGACACATTGTCCAAAAGGGTACCTGGATTTGGTGCCACAATAAATGTTTTATATGGTGATCAAGTTTGTGACCAAGGTTCTGATAATGAAGCAATGAGCAACATAATTTCTCATTATCTTTATTACCTTGATTTATTAGGAGTTGGTAGAGAAGAGGCAGGGCCTAATGAAATTCTCTCTTGTGCTGAACAAGCTGCTTTTAAACCAACTGGCTCACCTTCTTCTTCAACAACTTGA
Protein sequence

>MS.gene058206.t1

MNSKWTFFLLAIATILVIGNAQTSVKPLVKTVKGKKLCDKGWECKGWSVYCCNETISDYFHTYQFENLFSKRNDPTAHASGFWDYRSFITAAALYEPLGFGTSGGKHGGQKEVAAFLGHVGSKTSCGYGVATGGPFAWGLCYNKELSPDQFYCDDYYKLTYPCSPGVGREEAGPNEILSCAEQAAFKPTGSPSSSTT