Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061590.t1 | AES70865.2 | 90.8 | 791 | 65 | 4 | 1 | 785 | 1 | 789 | 0.00E+00 | 1424.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061590.t1 | Q9FT92 | 35.9 | 596 | 311 | 15 | 208 | 782 | 7 | 552 | 5.9e-85 | 317.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061590.t1 | G7J7X1 | 90.8 | 791 | 65 | 4 | 1 | 785 | 1 | 789 | 0.0e+00 | 1424.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene061590.t1 | TR | SWI/SNF-BAF60b |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene061590 | 0.817485 | 3.22E-52 | -1.69E-46 |
| MS.gene049672 | MS.gene061590 | 0.933023 | 3.52E-95 | -1.69E-46 |
| MS.gene049711 | MS.gene061590 | 0.81465 | 1.38E-51 | -1.69E-46 |
| MS.gene049850 | MS.gene061590 | 0.800896 | 1.16E-48 | -1.69E-46 |
| MS.gene05045 | MS.gene061590 | 0.86945 | 3.07E-66 | -1.69E-46 |
| MS.gene051247 | MS.gene061590 | 0.809375 | 1.95E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene061590 | 0.809642 | 1.71E-50 | -1.69E-46 |
| MS.gene051720 | MS.gene061590 | 0.820282 | 7.45E-53 | -1.69E-46 |
| MS.gene051744 | MS.gene061590 | 0.833502 | 5.14E-56 | -1.69E-46 |
| MS.gene051957 | MS.gene061590 | 0.836996 | 6.74E-57 | -1.69E-46 |
| MS.gene052519 | MS.gene061590 | 0.805606 | 1.23E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene061590 | 0.8529 | 3.41E-61 | -1.69E-46 |
| MS.gene053998 | MS.gene061590 | 0.81945 | 1.15E-52 | -1.69E-46 |
| MS.gene055778 | MS.gene061590 | 0.804365 | 2.24E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene061590 | 0.801714 | 7.90E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene061590 | 0.807808 | 4.22E-50 | -1.69E-46 |
| MS.gene059625 | MS.gene061590 | 0.817723 | 2.84E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061590.t1 | MTR_3g064270 | 90.771 | 791 | 65 | 4 | 1 | 785 | 1 | 789 | 0.0 | 1448 |
| MS.gene061590.t1 | MTR_3g064280 | 80.556 | 792 | 118 | 8 | 13 | 785 | 13 | 787 | 0.0 | 1255 |
| MS.gene061590.t1 | MTR_3g064260 | 77.222 | 799 | 162 | 8 | 1 | 785 | 1 | 793 | 0.0 | 1194 |
| MS.gene061590.t1 | MTR_3g064250 | 73.308 | 798 | 193 | 10 | 1 | 785 | 1 | 791 | 0.0 | 1129 |
| MS.gene061590.t1 | MTR_3g064290 | 64.912 | 399 | 92 | 6 | 403 | 785 | 37 | 403 | 4.98e-164 | 481 |
| MS.gene061590.t1 | MTR_3g064300 | 50.204 | 245 | 63 | 4 | 1 | 245 | 1 | 186 | 4.58e-67 | 224 |
| MS.gene061590.t1 | MTR_3g064300 | 69.892 | 93 | 28 | 0 | 308 | 400 | 186 | 278 | 9.23e-33 | 128 |
| MS.gene061590.t1 | MTR_5g021500 | 28.793 | 580 | 362 | 14 | 9 | 559 | 93 | 650 | 2.08e-60 | 222 |
| MS.gene061590.t1 | MTR_3g117490 | 28.596 | 584 | 354 | 14 | 10 | 559 | 223 | 777 | 1.26e-53 | 202 |
| MS.gene061590.t1 | MTR_5g021450 | 33.758 | 157 | 99 | 3 | 9 | 163 | 63 | 216 | 1.06e-22 | 103 |
| MS.gene061590.t1 | MTR_5g021450 | 33.758 | 157 | 99 | 3 | 9 | 163 | 63 | 216 | 1.26e-22 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061590.t1 | AT5G63700 | 37.367 | 562 | 312 | 8 | 18 | 542 | 25 | 583 | 2.15e-117 | 367 |
| MS.gene061590.t1 | AT5G08430 | 35.823 | 589 | 303 | 16 | 217 | 782 | 16 | 552 | 3.57e-98 | 315 |
| MS.gene061590.t1 | AT5G08430 | 47.239 | 326 | 159 | 4 | 217 | 539 | 16 | 331 | 2.68e-92 | 296 |
| MS.gene061590.t1 | AT5G63700 | 34.765 | 489 | 279 | 8 | 18 | 469 | 25 | 510 | 6.16e-84 | 277 |
| MS.gene061590.t1 | AT3G51120 | 29.983 | 577 | 360 | 13 | 18 | 567 | 113 | 672 | 2.52e-62 | 228 |
| MS.gene061590.t1 | AT5G23480 | 37.952 | 332 | 179 | 7 | 217 | 537 | 11 | 326 | 6.24e-61 | 213 |
| MS.gene061590.t1 | AT5G23480 | 37.952 | 332 | 179 | 7 | 217 | 537 | 11 | 326 | 6.24e-61 | 213 |
| MS.gene061590.t1 | AT5G23480 | 37.952 | 332 | 179 | 7 | 217 | 537 | 11 | 326 | 6.24e-61 | 213 |
| MS.gene061590.t1 | AT5G23480 | 37.952 | 332 | 179 | 7 | 217 | 537 | 11 | 326 | 6.24e-61 | 213 |
| MS.gene061590.t1 | AT5G23480 | 37.952 | 332 | 179 | 7 | 217 | 537 | 11 | 326 | 6.24e-61 | 213 |
| MS.gene061590.t1 | AT2G16485 | 27.562 | 566 | 346 | 14 | 15 | 536 | 599 | 1144 | 6.99e-55 | 206 |
| MS.gene061590.t1 | AT2G16485 | 27.949 | 551 | 348 | 13 | 15 | 536 | 599 | 1129 | 2.48e-54 | 204 |
| MS.gene061590.t1 | AT5G23480 | 32.530 | 332 | 166 | 8 | 217 | 537 | 11 | 295 | 5.21e-41 | 156 |
| MS.gene061590.t1 | AT2G18090 | 28.662 | 314 | 198 | 5 | 8 | 309 | 73 | 372 | 5.50e-37 | 149 |
| MS.gene061590.t1 | AT2G18090 | 28.662 | 314 | 198 | 5 | 8 | 309 | 73 | 372 | 7.89e-37 | 149 |
Find 129 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATTCTTCTTTCTCTTTAC+TGG | 0.133411 | 3.2:+59754703 | None:intergenic |
| AATTAGAGTTTGATTCTTTA+AGG | 0.138820 | 3.2:+59750497 | None:intergenic |
| ATCATTGACGATCGCCTTAA+TGG | 0.232256 | 3.2:+59750327 | None:intergenic |
| TCTGATGCAAGTGACTTTAT+AGG | 0.239586 | 3.2:-59754766 | MS.gene061590:CDS |
| AAAAGTCAACATCAGAAATT+TGG | 0.254676 | 3.2:+59753690 | None:intergenic |
| ACCAGTTCAGGAATTACTTT+TGG | 0.265948 | 3.2:+59751312 | None:intergenic |
| TACTGTTTCGGATCCCATTA+AGG | 0.282683 | 3.2:-59750341 | MS.gene061590:CDS |
| AAAGCTGCAGCAGAATTTCT+TGG | 0.306900 | 3.2:+59753741 | None:intergenic |
| AAGGCGAAGCGTTACTGTTT+CGG | 0.311093 | 3.2:-59750353 | MS.gene061590:CDS |
| TTGGCTGATAGATACATCTT+TGG | 0.313065 | 3.2:+59753709 | None:intergenic |
| CTTCCAGACCTTGAAGTCTA+AGG | 0.315086 | 3.2:+59750117 | None:intergenic |
| AAGTAAGTTTCAACTGTATC+TGG | 0.315565 | 3.2:+59754934 | None:intergenic |
| CCTATTGTCATTCGTCAAAA+AGG | 0.318120 | 3.2:+59755652 | None:intergenic |
| ATAAGCTTAAATCAATAAAT+AGG | 0.318864 | 3.2:-59754684 | MS.gene061590:CDS |
| ACTTTGCCATCAGAGGTTTC+TGG | 0.328845 | 3.2:+59754178 | None:intergenic |
| GATATCTTTATGCAGAGTTC+TGG | 0.336097 | 3.2:+59752085 | None:intergenic |
| AAAGTCATTTGGGTCGGATT+TGG | 0.336197 | 3.2:+59754135 | None:intergenic |
| AGTAACAAAAGATAAGAAAA+AGG | 0.340891 | 3.2:-59754659 | MS.gene061590:CDS |
| AAATGAGGGTTTGTGATTCT+AGG | 0.372377 | 3.2:-59765132 | MS.gene061590:intron |
| AATATTAAAGTCACTTCATC+TGG | 0.378745 | 3.2:-59750268 | MS.gene061590:CDS |
| TACAGCAAACTTACTATAGT+TGG | 0.379596 | 3.2:+59753248 | None:intergenic |
| TGTTGCTTTGTTTGCAAAGA+TGG | 0.383873 | 3.2:-59765160 | MS.gene061590:CDS |
| TCCAAAAGTAATTCCTGAAC+TGG | 0.386561 | 3.2:-59751313 | MS.gene061590:CDS |
| GCGGTAGAGCATCAAAGTTT+AGG | 0.390494 | 3.2:-59755204 | MS.gene061590:CDS |
| ACTCAAACACTGGAGTGAAT+TGG | 0.397301 | 3.2:-59750155 | MS.gene061590:CDS |
| CAGTACCAAATAGGAATATC+AGG | 0.398660 | 3.2:+59750226 | None:intergenic |
| TGGCTGATAGATACATCTTT+GGG | 0.400432 | 3.2:+59753710 | None:intergenic |
| ATATGCTCCCTTAGACTTCA+AGG | 0.405205 | 3.2:-59750125 | MS.gene061590:CDS |
| AGGGTCCTGATATTCCTATT+TGG | 0.407134 | 3.2:-59750231 | MS.gene061590:CDS |
| ACCTCTGATGGCAAAGTGTT+GGG | 0.407457 | 3.2:-59754172 | MS.gene061590:CDS |
| GATCGAAGCAACATCAATTT+CGG | 0.409248 | 3.2:+59754561 | None:intergenic |
| ACTTAATAAACGTGATTGTT+CGG | 0.410195 | 3.2:+59751341 | None:intergenic |
| TTTCACGCATTCCGCATGAT+AGG | 0.426940 | 3.2:+59755685 | None:intergenic |
| GGACAGTACTCCACATATAA+TGG | 0.429312 | 3.2:-59751192 | MS.gene061590:CDS |
| ATACCCGAGCAGTACCAAAT+AGG | 0.431291 | 3.2:+59750217 | None:intergenic |
| ATCTTGTCAGAATGTACGTT+TGG | 0.435727 | 3.2:-59754293 | MS.gene061590:CDS |
| TCATTGACGATCGCCTTAAT+GGG | 0.439449 | 3.2:+59750328 | None:intergenic |
| GCATTGCCTACAAAATCCTT+TGG | 0.444718 | 3.2:+59755111 | None:intergenic |
| AAAGGAAGGGTGGAATTCTC+AGG | 0.452189 | 3.2:-59754884 | MS.gene061590:CDS |
| TATTGATCGGGCCAATGAAA+AGG | 0.452894 | 3.2:-59751547 | MS.gene061590:CDS |
| GCAAACAAAGCAACAACCTT+CGG | 0.454642 | 3.2:+59765168 | None:intergenic |
| GACTTCAAGGTCTGGAAGAC+GGG | 0.455856 | 3.2:-59750112 | MS.gene061590:CDS |
| GATAAGAGAACAGATGTTGT+AGG | 0.457555 | 3.2:-59751153 | MS.gene061590:intron |
| CTCCCTTAGACTTCAAGGTC+TGG | 0.458388 | 3.2:-59750120 | MS.gene061590:CDS |
| GGTGAAGGGGAAGATGATAC+TGG | 0.459371 | 3.2:-59754793 | MS.gene061590:CDS |
| CAGTGTTTGAGTACAGTCAT+TGG | 0.459578 | 3.2:+59750166 | None:intergenic |
| TGTTGCCCAATAGCTGTTTG+TGG | 0.459843 | 3.2:-59755175 | MS.gene061590:CDS |
| TATTCCTATTTGGTACTGCT+CGG | 0.461241 | 3.2:-59750221 | MS.gene061590:CDS |
| GGAATCTTCTAGTGACAGAT+TGG | 0.473314 | 3.2:+59751284 | None:intergenic |
| ATATCAGTAGTTCAGAAGAA+AGG | 0.473583 | 3.2:-59754372 | MS.gene061590:CDS |
| TCCCCTTCACCTCTTTCATA+CGG | 0.477662 | 3.2:+59754805 | None:intergenic |
| GCAAAGATGGTGGTCAAATG+AGG | 0.486139 | 3.2:-59765147 | MS.gene061590:CDS |
| TTTGATTCTTTAAGGAGTGC+AGG | 0.487505 | 3.2:+59750505 | None:intergenic |
| AACCTCTGATGGCAAAGTGT+TGG | 0.488623 | 3.2:-59754173 | MS.gene061590:CDS |
| AAAGAATAACAAAAGAAAGA+AGG | 0.490327 | 3.2:-59765200 | MS.gene061590:CDS |
| TTGAGTACAGTCATTGGAAA+AGG | 0.490512 | 3.2:+59750172 | None:intergenic |
| TGGTACTGCTCGGGTATTCG+TGG | 0.491416 | 3.2:-59750211 | MS.gene061590:CDS |
| ATTCCTATTTGGTACTGCTC+GGG | 0.492363 | 3.2:-59750220 | MS.gene061590:CDS |
| GATATAGTGTTACTTGATTG+AGG | 0.493104 | 3.2:+59750442 | None:intergenic |
| GTTACGAAATCGTATTGATC+GGG | 0.495111 | 3.2:-59751559 | MS.gene061590:CDS |
| TGCTCGGGTATTCGTGGCTG+TGG | 0.499899 | 3.2:-59750205 | MS.gene061590:CDS |
| TATCAGTAGTTCAGAAGAAA+GGG | 0.502446 | 3.2:-59754371 | MS.gene061590:CDS |
| TCAACAGTGGCAGGAAAGGC+TGG | 0.504019 | 3.2:+59750574 | None:intergenic |
| AGATTGGTATCAACCAGTTC+AGG | 0.507246 | 3.2:+59751300 | None:intergenic |
| CTTGAAGAGGAGCTTAATTG+AGG | 0.511756 | 3.2:-59754215 | MS.gene061590:CDS |
| GTTGAGCAATTATCTACCCT+TGG | 0.513815 | 3.2:-59750556 | MS.gene061590:CDS |
| CAAAGATGGTGGTCAAATGA+GGG | 0.517178 | 3.2:-59765146 | MS.gene061590:CDS |
| CAATGACTGTACTCAAACAC+TGG | 0.517637 | 3.2:-59750165 | MS.gene061590:CDS |
| CAGGAAAGGCTGGATCATCT+TGG | 0.518951 | 3.2:+59750584 | None:intergenic |
| ATTTAATAACTTTGCTGAGG+CGG | 0.519206 | 3.2:-59754471 | MS.gene061590:CDS |
| TGGAAACATTAAGCGTGACT+TGG | 0.519914 | 3.2:-59754830 | MS.gene061590:CDS |
| TAAAACTTGTCTACTTGAAG+AGG | 0.523715 | 3.2:-59754228 | MS.gene061590:CDS |
| GATAATTGCTCAACAGTGGC+AGG | 0.525195 | 3.2:+59750565 | None:intergenic |
| ATTGATCGGGCCAATGAAAA+GGG | 0.526066 | 3.2:-59751546 | MS.gene061590:CDS |
| TTGCTCAACAGTGGCAGGAA+AGG | 0.527595 | 3.2:+59750570 | None:intergenic |
| TGACTTAGGTCCGAAATCTC+CGG | 0.537439 | 3.2:-59750617 | MS.gene061590:intron |
| GAAGTCTAAGGGAGCATATG+TGG | 0.537531 | 3.2:+59750129 | None:intergenic |
| TTGAGCAAAACCATTATATG+TGG | 0.543150 | 3.2:+59751182 | None:intergenic |
| TCCCAACACTTTGCCATCAG+AGG | 0.549632 | 3.2:+59754171 | None:intergenic |
| TTACATGGCAGTGGATCTCA+AGG | 0.551102 | 3.2:-59751593 | MS.gene061590:intron |
| GCATTCAAATTTCGAAAGCA+CGG | 0.552990 | 3.2:-59754337 | MS.gene061590:CDS |
| TGTTACGAAATCGTATTGAT+CGG | 0.553902 | 3.2:-59751560 | MS.gene061590:CDS |
| TTCCAGACCTTGAAGTCTAA+GGG | 0.554594 | 3.2:+59750118 | None:intergenic |
| AGAAGAAAGGGATGATAATG+AGG | 0.557090 | 3.2:-59754359 | MS.gene061590:CDS |
| GGATGTCAATCATACAGTAA+AGG | 0.558250 | 3.2:-59750377 | MS.gene061590:CDS |
| AGGTTCCGACTCTGACGACT+TGG | 0.559965 | 3.2:-59754746 | MS.gene061590:CDS |
| CAGAAATCTGAGTATTAACA+TGG | 0.561025 | 3.2:-59750398 | MS.gene061590:CDS |
| AGACTTCAAGGTCTGGAAGA+CGG | 0.561223 | 3.2:-59750113 | MS.gene061590:CDS |
| AGAGTTACAATTCTCTCCAA+TGG | 0.561579 | 3.2:+59751218 | None:intergenic |
| GACGGGCGAGAGTGAAAGAG+AGG | 0.564639 | 3.2:-59750095 | MS.gene061590:CDS |
| ATTGGAGAGAATTGTAACTC+TGG | 0.565994 | 3.2:-59751216 | MS.gene061590:CDS |
| ATCGGGCCAATGAAAAGGGA+TGG | 0.569521 | 3.2:-59751542 | MS.gene061590:CDS |
| CAAATTTAATAACTTTGCTG+AGG | 0.569873 | 3.2:-59754474 | MS.gene061590:CDS |
| ATGCTGACGTTGATTCTGAT+GGG | 0.577383 | 3.2:-59755060 | MS.gene061590:CDS |
| GATCCGTATGAAAGAGGTGA+AGG | 0.578007 | 3.2:-59754808 | MS.gene061590:CDS |
| GACTTGGATCCGTATGAAAG+AGG | 0.580416 | 3.2:-59754814 | MS.gene061590:CDS |
| ATTATAGCTGCAAATCCACT+TGG | 0.581121 | 3.2:+59754262 | None:intergenic |
| GCTACTGTCAAAACAACCAA+AGG | 0.582398 | 3.2:-59755127 | MS.gene061590:CDS |
| AATGCTGACGTTGATTCTGA+TGG | 0.584439 | 3.2:-59755061 | MS.gene061590:CDS |
| TTTGTCTTCAGAAGCACCAA+GGG | 0.586501 | 3.2:+59750540 | None:intergenic |
| GAATTGCAAGAAGTAGCCAT+TGG | 0.586633 | 3.2:-59751234 | MS.gene061590:CDS |
| TGCTTTGTTTGCAAAGATGG+TGG | 0.589994 | 3.2:-59765157 | MS.gene061590:CDS |
| TTTAAGTGACAGTGATGAAG+AGG | 0.590984 | 3.2:-59750296 | MS.gene061590:CDS |
| CGACTTGGATGGCACGTCAA+GGG | 0.592789 | 3.2:-59754731 | MS.gene061590:CDS |
| TCAATCATACAGTAAAGGAA+AGG | 0.592932 | 3.2:-59750372 | MS.gene061590:CDS |
| ATTCGTGGCTGTGGAACAAG+AGG | 0.594921 | 3.2:-59750196 | MS.gene061590:CDS |
| ACGACTTGGATGGCACGTCA+AGG | 0.595753 | 3.2:-59754732 | MS.gene061590:CDS |
| TCCGTATGAAAGAGGTGAAG+GGG | 0.605656 | 3.2:-59754806 | MS.gene061590:CDS |
| TCCGACTCTGACGACTTGGA+TGG | 0.607631 | 3.2:-59754742 | MS.gene061590:CDS |
| TCTGGAAGAAAGAGAGTGGA+GGG | 0.610620 | 3.2:-59750250 | MS.gene061590:CDS |
| TTCATCTGGAAGAAAGAGAG+TGG | 0.613592 | 3.2:-59750254 | MS.gene061590:CDS |
| GCCATCCAAGTCGTCAGAGT+CGG | 0.617397 | 3.2:+59754741 | None:intergenic |
| ATCTGGAAGAAAGAGAGTGG+AGG | 0.617982 | 3.2:-59750251 | MS.gene061590:CDS |
| CTTTGTCTTCAGAAGCACCA+AGG | 0.618281 | 3.2:+59750539 | None:intergenic |
| ATCCGTATGAAAGAGGTGAA+GGG | 0.624920 | 3.2:-59754807 | MS.gene061590:CDS |
| GCTTCTGAAGACAAAGATGA+TGG | 0.629492 | 3.2:-59750532 | MS.gene061590:CDS |
| AAGAAGGAAGAGATTGCCGA+AGG | 0.632247 | 3.2:-59765184 | MS.gene061590:CDS |
| AAGCAACCAGAAACCTCTGA+TGG | 0.633349 | 3.2:-59754184 | MS.gene061590:CDS |
| GGAGAGAATTGTAACTCTGG+AGG | 0.648805 | 3.2:-59751213 | MS.gene061590:CDS |
| AATGACAATAGGTGGTGTTG+CGG | 0.650740 | 3.2:-59755641 | MS.gene061590:intron |
| ACTTTGATGCTCTACCGCAA+AGG | 0.655269 | 3.2:+59755209 | None:intergenic |
| GGGCCAATGAAAAGGGATGG+AGG | 0.657726 | 3.2:-59751539 | MS.gene061590:CDS |
| CTGTATCAGAGAATGACAGA+TGG | 0.657969 | 3.2:-59753284 | MS.gene061590:CDS |
| CGTTTGGAAGAGCTGCCAAG+TGG | 0.667248 | 3.2:-59754277 | MS.gene061590:CDS |
| TTGCTTTAAAGCCTATCATG+CGG | 0.669138 | 3.2:-59755696 | MS.gene061590:CDS |
| GGTAGATAATTGCTCAACAG+TGG | 0.676348 | 3.2:+59750561 | None:intergenic |
| TGCTGACGTTGATTCTGATG+GGG | 0.694280 | 3.2:-59755059 | MS.gene061590:intron |
| TACATGGCAGTGGATCTCAA+GGG | 0.715769 | 3.2:-59751592 | MS.gene061590:intron |
| TTCGTGGCTGTGGAACAAGA+GGG | 0.724248 | 3.2:-59750195 | MS.gene061590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 59750054 | 59765230 | 59750054 | ID=MS.gene061590 |
| chr3.2 | mRNA | 59750054 | 59765230 | 59750054 | ID=MS.gene061590.t1;Parent=MS.gene061590 |
| chr3.2 | exon | 59765133 | 59765230 | 59765133 | ID=MS.gene061590.t1.exon1;Parent=MS.gene061590.t1 |
| chr3.2 | CDS | 59765133 | 59765230 | 59765133 | ID=cds.MS.gene061590.t1;Parent=MS.gene061590.t1 |
| chr3.2 | exon | 59755642 | 59755721 | 59755642 | ID=MS.gene061590.t1.exon2;Parent=MS.gene061590.t1 |
| chr3.2 | CDS | 59755642 | 59755721 | 59755642 | ID=cds.MS.gene061590.t1;Parent=MS.gene061590.t1 |
| chr3.2 | exon | 59755060 | 59755247 | 59755060 | ID=MS.gene061590.t1.exon3;Parent=MS.gene061590.t1 |
| chr3.2 | CDS | 59755060 | 59755247 | 59755060 | ID=cds.MS.gene061590.t1;Parent=MS.gene061590.t1 |
| chr3.2 | exon | 59754098 | 59754977 | 59754098 | ID=MS.gene061590.t1.exon4;Parent=MS.gene061590.t1 |
| chr3.2 | CDS | 59754098 | 59754977 | 59754098 | ID=cds.MS.gene061590.t1;Parent=MS.gene061590.t1 |
| chr3.2 | exon | 59753685 | 59753782 | 59753685 | ID=MS.gene061590.t1.exon5;Parent=MS.gene061590.t1 |
| chr3.2 | CDS | 59753685 | 59753782 | 59753685 | ID=cds.MS.gene061590.t1;Parent=MS.gene061590.t1 |
| chr3.2 | exon | 59753262 | 59753321 | 59753262 | ID=MS.gene061590.t1.exon6;Parent=MS.gene061590.t1 |
| chr3.2 | CDS | 59753262 | 59753321 | 59753262 | ID=cds.MS.gene061590.t1;Parent=MS.gene061590.t1 |
| chr3.2 | exon | 59752076 | 59752126 | 59752076 | ID=MS.gene061590.t1.exon7;Parent=MS.gene061590.t1 |
| chr3.2 | CDS | 59752076 | 59752126 | 59752076 | ID=cds.MS.gene061590.t1;Parent=MS.gene061590.t1 |
| chr3.2 | exon | 59751524 | 59751604 | 59751524 | ID=MS.gene061590.t1.exon8;Parent=MS.gene061590.t1 |
| chr3.2 | CDS | 59751524 | 59751604 | 59751524 | ID=cds.MS.gene061590.t1;Parent=MS.gene061590.t1 |
| chr3.2 | exon | 59751154 | 59751397 | 59751154 | ID=MS.gene061590.t1.exon9;Parent=MS.gene061590.t1 |
| chr3.2 | CDS | 59751154 | 59751397 | 59751154 | ID=cds.MS.gene061590.t1;Parent=MS.gene061590.t1 |
| chr3.2 | exon | 59750054 | 59750631 | 59750054 | ID=MS.gene061590.t1.exon10;Parent=MS.gene061590.t1 |
| chr3.2 | CDS | 59750054 | 59750631 | 59750054 | ID=cds.MS.gene061590.t1;Parent=MS.gene061590.t1 |
| Gene Sequence |
| Protein sequence |
