Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049672.t1 | AES70865.2 | 90.9 | 791 | 64 | 4 | 1 | 785 | 1 | 789 | 0.00E+00 | 1425.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049672.t1 | Q9FT92 | 35.6 | 596 | 313 | 15 | 208 | 782 | 7 | 552 | 5.0e-84 | 313.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049672.t1 | G7J7X1 | 90.9 | 791 | 64 | 4 | 1 | 785 | 1 | 789 | 0.0e+00 | 1425.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene049672.t1 | TR | SWI/SNF-BAF60b |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene049672 | 0.819144 | 1.36E-52 | -1.69E-46 |
| MS.gene049672 | MS.gene049711 | 0.807794 | 4.25E-50 | -1.69E-46 |
| MS.gene049672 | MS.gene049850 | 0.802587 | 5.23E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene05045 | 0.856886 | 2.38E-62 | -1.69E-46 |
| MS.gene049672 | MS.gene051719 | 0.805924 | 1.06E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene051720 | 0.815823 | 7.59E-52 | -1.69E-46 |
| MS.gene049672 | MS.gene051744 | 0.817481 | 3.22E-52 | -1.69E-46 |
| MS.gene049672 | MS.gene053226 | 0.844452 | 7.50E-59 | -1.69E-46 |
| MS.gene049672 | MS.gene053998 | 0.803388 | 3.57E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene057915 | 0.802725 | 4.89E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene06133 | 0.814957 | 1.18E-51 | -1.69E-46 |
| MS.gene049672 | MS.gene061590 | 0.933023 | 3.52E-95 | -1.69E-46 |
| MS.gene049672 | MS.gene061872 | 0.801072 | 1.07E-48 | -1.69E-46 |
| MS.gene049672 | MS.gene061877 | 0.837617 | 4.68E-57 | -1.69E-46 |
| MS.gene049672 | MS.gene062821 | 0.800989 | 1.11E-48 | -1.69E-46 |
| MS.gene049672 | MS.gene065667 | 0.835317 | 1.80E-56 | -1.69E-46 |
| MS.gene049672 | MS.gene065979 | 0.800103 | 1.69E-48 | -1.69E-46 |
| MS.gene049672 | MS.gene066105 | 0.803526 | 3.34E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene06672 | 0.801515 | 8.68E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene066782 | 0.812325 | 4.49E-51 | -1.69E-46 |
| MS.gene049672 | MS.gene066784 | 0.818847 | 1.58E-52 | -1.69E-46 |
| MS.gene049672 | MS.gene06723 | 0.816286 | 5.98E-52 | -1.69E-46 |
| MS.gene049672 | MS.gene06890 | 0.809096 | 2.24E-50 | -1.69E-46 |
| MS.gene049672 | MS.gene068992 | 0.804645 | 1.96E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene06940 | 0.818429 | 1.97E-52 | -1.69E-46 |
| MS.gene049672 | MS.gene070787 | 0.806069 | 9.84E-50 | -1.69E-46 |
| MS.gene049672 | MS.gene071315 | 0.801472 | 8.86E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene071316 | 0.801058 | 1.08E-48 | -1.69E-46 |
| MS.gene049672 | MS.gene07294 | 0.801072 | 1.07E-48 | -1.69E-46 |
| MS.gene049672 | MS.gene08396 | 0.809132 | 2.20E-50 | -1.69E-46 |
| MS.gene049672 | MS.gene09873 | 0.803998 | 2.67E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene20903 | 0.809694 | 1.67E-50 | -1.69E-46 |
| MS.gene049672 | MS.gene21536 | 0.814169 | 1.77E-51 | -1.69E-46 |
| MS.gene049672 | MS.gene21551 | 0.81527 | 1.01E-51 | -1.69E-46 |
| MS.gene049672 | MS.gene21613 | 0.812485 | 4.14E-51 | -1.69E-46 |
| MS.gene049672 | MS.gene22243 | 0.803311 | 3.70E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene23030 | 0.810338 | 1.21E-50 | -1.69E-46 |
| MS.gene049672 | MS.gene23571 | 0.800723 | 1.26E-48 | -1.69E-46 |
| MS.gene049672 | MS.gene23918 | 0.800716 | 1.26E-48 | -1.69E-46 |
| MS.gene049672 | MS.gene24623 | 0.822769 | 1.98E-53 | -1.69E-46 |
| MS.gene049672 | MS.gene24626 | 0.836012 | 1.20E-56 | -1.69E-46 |
| MS.gene049672 | MS.gene24628 | 0.826488 | 2.64E-54 | -1.69E-46 |
| MS.gene049672 | MS.gene25673 | 0.802747 | 4.85E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene26380 | 0.804926 | 1.71E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene26659 | 0.807197 | 5.69E-50 | -1.69E-46 |
| MS.gene049672 | MS.gene29022 | 0.804548 | 2.05E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene29807 | 0.800277 | 1.55E-48 | -1.69E-46 |
| MS.gene049672 | MS.gene30739 | 0.812368 | 4.39E-51 | -1.69E-46 |
| MS.gene049672 | MS.gene31349 | 0.80448 | 2.12E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene31445 | 0.806557 | 7.77E-50 | -1.69E-46 |
| MS.gene049672 | MS.gene35218 | 0.811047 | 8.51E-51 | -1.69E-46 |
| MS.gene049672 | MS.gene35575 | 0.800702 | 1.27E-48 | -1.69E-46 |
| MS.gene049672 | MS.gene38844 | 0.812671 | 3.77E-51 | -1.69E-46 |
| MS.gene049672 | MS.gene39882 | 0.810838 | 9.45E-51 | -1.69E-46 |
| MS.gene049672 | MS.gene44437 | 0.826479 | 2.65E-54 | -1.69E-46 |
| MS.gene049672 | MS.gene44510 | 0.808932 | 2.43E-50 | -1.69E-46 |
| MS.gene049672 | MS.gene45425 | 0.80225 | 6.13E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene45613 | 0.809972 | 1.45E-50 | -1.69E-46 |
| MS.gene049672 | MS.gene48346 | 0.812447 | 4.22E-51 | -1.69E-46 |
| MS.gene049672 | MS.gene48519 | 0.822373 | 2.45E-53 | -1.69E-46 |
| MS.gene049672 | MS.gene48840 | 0.805285 | 1.44E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene50564 | 0.804774 | 1.84E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene51788 | 0.809102 | 2.23E-50 | -1.69E-46 |
| MS.gene049672 | MS.gene51877 | 0.83186 | 1.31E-55 | -1.69E-46 |
| MS.gene049672 | MS.gene53586 | 0.80537 | 1.38E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene54936 | 0.801798 | 7.60E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene54967 | 0.808963 | 2.39E-50 | -1.69E-46 |
| MS.gene049672 | MS.gene55101 | 0.803859 | 2.85E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene56067 | 0.811322 | 7.42E-51 | -1.69E-46 |
| MS.gene049672 | MS.gene56414 | 0.830572 | 2.72E-55 | -1.69E-46 |
| MS.gene049672 | MS.gene60174 | 0.834962 | 2.21E-56 | -1.69E-46 |
| MS.gene049672 | MS.gene62491 | 0.819729 | 9.96E-53 | -1.69E-46 |
| MS.gene049672 | MS.gene65271 | 0.822276 | 2.58E-53 | -1.69E-46 |
| MS.gene049672 | MS.gene65276 | 0.802039 | 6.78E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene68442 | 0.801778 | 7.67E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene69459 | 0.804568 | 2.03E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene69778 | 0.802163 | 6.39E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene71704 | 0.827331 | 1.66E-54 | -1.69E-46 |
| MS.gene049672 | MS.gene71718 | 0.811964 | 5.38E-51 | -1.69E-46 |
| MS.gene049672 | MS.gene72347 | 0.806322 | 8.70E-50 | -1.69E-46 |
| MS.gene049672 | MS.gene75670 | 0.808971 | 2.38E-50 | -1.69E-46 |
| MS.gene049672 | MS.gene76549 | 0.803127 | 4.04E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene81900 | 0.815567 | 8.65E-52 | -1.69E-46 |
| MS.gene049672 | MS.gene83055 | 0.816606 | 5.07E-52 | -1.69E-46 |
| MS.gene049672 | MS.gene83227 | 0.807024 | 6.18E-50 | -1.69E-46 |
| MS.gene049672 | MS.gene84426 | 0.813904 | 2.02E-51 | -1.69E-46 |
| MS.gene049672 | MS.gene84454 | 0.807263 | 5.50E-50 | -1.69E-46 |
| MS.gene049672 | MS.gene85164 | 0.802019 | 6.84E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene86086 | 0.801357 | 9.35E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene88171 | 0.803579 | 3.26E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene90649 | 0.808952 | 2.40E-50 | -1.69E-46 |
| MS.gene049672 | MS.gene90880 | 0.810275 | 1.25E-50 | -1.69E-46 |
| MS.gene049672 | MS.gene92982 | 0.811673 | 6.22E-51 | -1.69E-46 |
| MS.gene049672 | MS.gene93311 | 0.815256 | 1.01E-51 | -1.69E-46 |
| MS.gene049672 | MS.gene97762 | 0.803575 | 3.26E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene99547 | 0.816209 | 6.22E-52 | -1.69E-46 |
| MS.gene049672 | MS.gene99595 | 0.838354 | 3.02E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049672.t1 | MTR_3g064270 | 90.898 | 791 | 64 | 4 | 1 | 785 | 1 | 789 | 0.0 | 1449 |
| MS.gene049672.t1 | MTR_3g064280 | 80.556 | 792 | 118 | 8 | 13 | 785 | 13 | 787 | 0.0 | 1254 |
| MS.gene049672.t1 | MTR_3g064260 | 77.096 | 799 | 163 | 8 | 1 | 785 | 1 | 793 | 0.0 | 1192 |
| MS.gene049672.t1 | MTR_3g064250 | 73.308 | 798 | 193 | 10 | 1 | 785 | 1 | 791 | 0.0 | 1129 |
| MS.gene049672.t1 | MTR_3g064290 | 65.163 | 399 | 91 | 6 | 403 | 785 | 37 | 403 | 6.95e-165 | 483 |
| MS.gene049672.t1 | MTR_3g064300 | 50.204 | 245 | 63 | 4 | 1 | 245 | 1 | 186 | 4.77e-67 | 224 |
| MS.gene049672.t1 | MTR_3g064300 | 69.892 | 93 | 28 | 0 | 308 | 400 | 186 | 278 | 9.23e-33 | 128 |
| MS.gene049672.t1 | MTR_5g021500 | 28.497 | 579 | 365 | 14 | 9 | 559 | 93 | 650 | 2.67e-59 | 219 |
| MS.gene049672.t1 | MTR_3g117490 | 28.253 | 584 | 356 | 14 | 10 | 559 | 223 | 777 | 1.61e-52 | 198 |
| MS.gene049672.t1 | MTR_5g021450 | 33.758 | 157 | 99 | 3 | 9 | 163 | 63 | 216 | 1.02e-22 | 103 |
| MS.gene049672.t1 | MTR_5g021450 | 33.758 | 157 | 99 | 3 | 9 | 163 | 63 | 216 | 1.29e-22 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049672.t1 | AT5G63700 | 37.367 | 562 | 312 | 8 | 18 | 542 | 25 | 583 | 2.80e-117 | 367 |
| MS.gene049672.t1 | AT5G08430 | 35.484 | 589 | 305 | 16 | 217 | 782 | 16 | 552 | 5.74e-97 | 312 |
| MS.gene049672.t1 | AT5G08430 | 46.626 | 326 | 161 | 4 | 217 | 539 | 16 | 331 | 5.01e-91 | 293 |
| MS.gene049672.t1 | AT5G63700 | 34.560 | 489 | 280 | 8 | 18 | 469 | 25 | 510 | 3.09e-83 | 275 |
| MS.gene049672.t1 | AT5G23480 | 37.952 | 332 | 179 | 7 | 217 | 537 | 11 | 326 | 1.26e-61 | 214 |
| MS.gene049672.t1 | AT5G23480 | 37.952 | 332 | 179 | 7 | 217 | 537 | 11 | 326 | 1.26e-61 | 214 |
| MS.gene049672.t1 | AT5G23480 | 37.952 | 332 | 179 | 7 | 217 | 537 | 11 | 326 | 1.26e-61 | 214 |
| MS.gene049672.t1 | AT5G23480 | 37.952 | 332 | 179 | 7 | 217 | 537 | 11 | 326 | 1.26e-61 | 214 |
| MS.gene049672.t1 | AT5G23480 | 37.952 | 332 | 179 | 7 | 217 | 537 | 11 | 326 | 1.26e-61 | 214 |
| MS.gene049672.t1 | AT3G51120 | 29.636 | 577 | 362 | 13 | 18 | 567 | 113 | 672 | 2.84e-61 | 225 |
| MS.gene049672.t1 | AT2G16485 | 27.208 | 566 | 348 | 14 | 15 | 536 | 599 | 1144 | 8.33e-54 | 202 |
| MS.gene049672.t1 | AT2G16485 | 27.586 | 551 | 350 | 13 | 15 | 536 | 599 | 1129 | 2.87e-53 | 201 |
| MS.gene049672.t1 | AT5G23480 | 32.530 | 332 | 166 | 8 | 217 | 537 | 11 | 295 | 1.01e-41 | 158 |
| MS.gene049672.t1 | AT2G18090 | 28.662 | 314 | 198 | 5 | 8 | 309 | 73 | 372 | 4.36e-37 | 149 |
| MS.gene049672.t1 | AT2G18090 | 28.662 | 314 | 198 | 5 | 8 | 309 | 73 | 372 | 6.60e-37 | 149 |
Find 127 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATTCTTCTTTCTCTTTAC+TGG | 0.133411 | 3.3:+57848667 | None:intergenic |
| AATTAGAGTTTGATTCTTTA+AGG | 0.138820 | 3.3:+57844522 | None:intergenic |
| ATCATTGACGATCGCCTTAA+TGG | 0.232256 | 3.3:+57844352 | None:intergenic |
| TCTGATGCAAGTGACTTTAT+AGG | 0.239586 | 3.3:-57848730 | MS.gene049672:CDS |
| AAAAGTCAACATCAGAAATT+TGG | 0.254676 | 3.3:+57847715 | None:intergenic |
| ACCAGTTCAGGAATTACTTT+TGG | 0.265948 | 3.3:+57845337 | None:intergenic |
| TACTGTTTCGGATCCCATTA+AGG | 0.282683 | 3.3:-57844366 | MS.gene049672:CDS |
| AAAGCTGCAGCAGAATTTCT+TGG | 0.306900 | 3.3:+57847766 | None:intergenic |
| AAGGCGAAGCGTTACTGTTT+CGG | 0.311093 | 3.3:-57844378 | MS.gene049672:CDS |
| TTGGCTGATAGATACATCTT+TGG | 0.313065 | 3.3:+57847734 | None:intergenic |
| CTTCCAGACCTTGAAGTCTA+AGG | 0.315086 | 3.3:+57844142 | None:intergenic |
| AAGTAAGTTTCAACTGTATC+TGG | 0.315565 | 3.3:+57848898 | None:intergenic |
| ATAAGCTTAAATCAATAAAT+AGG | 0.318864 | 3.3:-57848648 | MS.gene049672:CDS |
| CCGATTGTCATTCGTCAAAA+AGG | 0.325425 | 3.3:+57849381 | None:intergenic |
| ACTTTGCCATCAGAGGTTTC+TGG | 0.328845 | 3.3:+57848142 | None:intergenic |
| GATATCTTTATGCAGAGTTC+TGG | 0.336097 | 3.3:+57846110 | None:intergenic |
| AAAGTCATTTGGGTCGGATT+TGG | 0.336197 | 3.3:+57848099 | None:intergenic |
| AGTAACAAAAGATAAGAAAA+AGG | 0.340891 | 3.3:-57848623 | MS.gene049672:CDS |
| AAATGAGGGTCTGTGATTCT+AGG | 0.359421 | 3.3:-57849962 | MS.gene049672:intron |
| AATATTAAAGTCACTTCATC+TGG | 0.378745 | 3.3:-57844293 | MS.gene049672:CDS |
| TACAGCAAACTTACTATAGT+TGG | 0.379596 | 3.3:+57847273 | None:intergenic |
| TGTTGCTTTGTTTGCAAAGA+TGG | 0.383873 | 3.3:-57849990 | MS.gene049672:CDS |
| TCCAAAAGTAATTCCTGAAC+TGG | 0.386561 | 3.3:-57845338 | MS.gene049672:CDS |
| GCGGTAGAGCATCAAAGTTT+AGG | 0.390494 | 3.3:-57849168 | MS.gene049672:CDS |
| ACTCAAACACTGGAGTGAAT+TGG | 0.397301 | 3.3:-57844180 | MS.gene049672:CDS |
| CAGTACCAAATAGGAATATC+AGG | 0.398660 | 3.3:+57844251 | None:intergenic |
| TGGCTGATAGATACATCTTT+GGG | 0.400432 | 3.3:+57847735 | None:intergenic |
| ATATGCTCCCTTAGACTTCA+AGG | 0.405205 | 3.3:-57844150 | MS.gene049672:CDS |
| AGGGTCCTGATATTCCTATT+TGG | 0.407134 | 3.3:-57844256 | MS.gene049672:CDS |
| ACCTCTGATGGCAAAGTGTT+GGG | 0.407457 | 3.3:-57848136 | MS.gene049672:CDS |
| GATCGAAGCAACATCAATTT+CGG | 0.409248 | 3.3:+57848525 | None:intergenic |
| ACTTAATAAACGTGATTGTT+CGG | 0.410195 | 3.3:+57845366 | None:intergenic |
| TTTCACGCATTCCGCATGAT+AGG | 0.426940 | 3.3:+57849414 | None:intergenic |
| GGACAGTACTCCACATATAA+TGG | 0.429312 | 3.3:-57845217 | MS.gene049672:CDS |
| ATACCCGAGCAGTACCAAAT+AGG | 0.431291 | 3.3:+57844242 | None:intergenic |
| ATCTTGTCAGAATGTACGTT+TGG | 0.435727 | 3.3:-57848257 | MS.gene049672:CDS |
| TCATTGACGATCGCCTTAAT+GGG | 0.439449 | 3.3:+57844353 | None:intergenic |
| GCATTGCCTACAAAATCCTT+TGG | 0.444718 | 3.3:+57849075 | None:intergenic |
| AAAGGAAGGGTGGAATTCTC+AGG | 0.452189 | 3.3:-57848848 | MS.gene049672:CDS |
| TATTGATCGGGCCAATGAAA+AGG | 0.452894 | 3.3:-57845572 | MS.gene049672:CDS |
| GACTTCAAGGTCTGGAAGAC+GGG | 0.455856 | 3.3:-57844137 | MS.gene049672:CDS |
| GATAAGAGAACAGATGTTGT+AGG | 0.457555 | 3.3:-57845178 | MS.gene049672:intron |
| CTCCCTTAGACTTCAAGGTC+TGG | 0.458388 | 3.3:-57844145 | MS.gene049672:CDS |
| GGTGAAGGGGAAGATGATAC+TGG | 0.459371 | 3.3:-57848757 | MS.gene049672:CDS |
| CAGTGTTTGAGTACAGTCAT+TGG | 0.459578 | 3.3:+57844191 | None:intergenic |
| TGTTGCCCAATAGCTGTTTG+TGG | 0.459843 | 3.3:-57849139 | MS.gene049672:CDS |
| TATTCCTATTTGGTACTGCT+CGG | 0.461241 | 3.3:-57844246 | MS.gene049672:CDS |
| GGAATCTTCTAGTGACAGAT+TGG | 0.473314 | 3.3:+57845309 | None:intergenic |
| ATATCAGTAGTTCAGAAGAA+AGG | 0.473583 | 3.3:-57848336 | MS.gene049672:CDS |
| TCCCCTTCACCTCTTTCATA+CGG | 0.477662 | 3.3:+57848769 | None:intergenic |
| TTTGATTCTTTAAGGAGTGC+AGG | 0.487505 | 3.3:+57844530 | None:intergenic |
| AACCTCTGATGGCAAAGTGT+TGG | 0.488623 | 3.3:-57848137 | MS.gene049672:CDS |
| AAAGAATAACAAAAGAAAGA+AGG | 0.490327 | 3.3:-57850030 | MS.gene049672:CDS |
| TTGAGTACAGTCATTGGAAA+AGG | 0.490512 | 3.3:+57844197 | None:intergenic |
| TGGTACTGCTCGGGTATTCG+TGG | 0.491416 | 3.3:-57844236 | MS.gene049672:CDS |
| ATTCCTATTTGGTACTGCTC+GGG | 0.492363 | 3.3:-57844245 | MS.gene049672:CDS |
| GATATAGTGTTACTTGATTG+AGG | 0.493104 | 3.3:+57844467 | None:intergenic |
| GTTACGAAATCGTATTGATC+GGG | 0.495111 | 3.3:-57845584 | MS.gene049672:CDS |
| TGCTCGGGTATTCGTGGCTG+TGG | 0.499899 | 3.3:-57844230 | MS.gene049672:CDS |
| TATCAGTAGTTCAGAAGAAA+GGG | 0.502446 | 3.3:-57848335 | MS.gene049672:CDS |
| TCAACAGTGGCAGGAAAGGC+TGG | 0.504019 | 3.3:+57844599 | None:intergenic |
| AGATTGGTATCAACCAGTTC+AGG | 0.507246 | 3.3:+57845325 | None:intergenic |
| CTTGAAGAGGAGCTTAATTG+AGG | 0.511756 | 3.3:-57848179 | MS.gene049672:CDS |
| GTTGAGCAATTATCTACCCT+TGG | 0.513815 | 3.3:-57844581 | MS.gene049672:CDS |
| CAATGACTGTACTCAAACAC+TGG | 0.517637 | 3.3:-57844190 | MS.gene049672:CDS |
| GCAAAGATGGTGGTCAAATG+AGG | 0.518113 | 3.3:-57849977 | MS.gene049672:CDS |
| CAGGAAAGGCTGGATCATCT+TGG | 0.518951 | 3.3:+57844609 | None:intergenic |
| ATTTAATAACTTTGCTGAGG+CGG | 0.519206 | 3.3:-57848435 | MS.gene049672:CDS |
| TGGAAACATTAAGCGTGACT+TGG | 0.519914 | 3.3:-57848794 | MS.gene049672:CDS |
| TAAAACTTGTCTACTTGAAG+AGG | 0.523715 | 3.3:-57848192 | MS.gene049672:CDS |
| GATAATTGCTCAACAGTGGC+AGG | 0.525195 | 3.3:+57844590 | None:intergenic |
| ATTGATCGGGCCAATGAAAA+GGG | 0.526066 | 3.3:-57845571 | MS.gene049672:CDS |
| TTGCTCAACAGTGGCAGGAA+AGG | 0.527595 | 3.3:+57844595 | None:intergenic |
| TGACTTAGGTCCGAAATCTC+CGG | 0.537439 | 3.3:-57844642 | MS.gene049672:intron |
| GAAGTCTAAGGGAGCATATG+TGG | 0.537531 | 3.3:+57844154 | None:intergenic |
| TTGAGCAAAACCATTATATG+TGG | 0.543150 | 3.3:+57845207 | None:intergenic |
| TCCCAACACTTTGCCATCAG+AGG | 0.549632 | 3.3:+57848135 | None:intergenic |
| TTACATGGCAGTGGATCTCA+AGG | 0.551102 | 3.3:-57845618 | MS.gene049672:intron |
| AGGTTCTGACTCTGACGACT+TGG | 0.551629 | 3.3:-57848710 | MS.gene049672:CDS |
| GCATTCAAATTTCGAAAGCA+CGG | 0.552990 | 3.3:-57848301 | MS.gene049672:CDS |
| TGTTACGAAATCGTATTGAT+CGG | 0.553902 | 3.3:-57845585 | MS.gene049672:CDS |
| TTCCAGACCTTGAAGTCTAA+GGG | 0.554594 | 3.3:+57844143 | None:intergenic |
| AGAAGAAAGGGATGATAATG+AGG | 0.557090 | 3.3:-57848323 | MS.gene049672:CDS |
| GGATGTCAATCATACAGTAA+AGG | 0.558250 | 3.3:-57844402 | MS.gene049672:CDS |
| CAGAAATCTGAGTATTAACA+TGG | 0.561025 | 3.3:-57844423 | MS.gene049672:CDS |
| AGACTTCAAGGTCTGGAAGA+CGG | 0.561223 | 3.3:-57844138 | MS.gene049672:CDS |
| AGAGTTACAATTCTCTCCAA+TGG | 0.561579 | 3.3:+57845243 | None:intergenic |
| GACGGGCGAGAGTGAAAGAG+AGG | 0.564639 | 3.3:-57844120 | MS.gene049672:CDS |
| ATTGGAGAGAATTGTAACTC+TGG | 0.565994 | 3.3:-57845241 | MS.gene049672:CDS |
| ATCGGGCCAATGAAAAGGGA+TGG | 0.569521 | 3.3:-57845567 | MS.gene049672:CDS |
| CAAATTTAATAACTTTGCTG+AGG | 0.569873 | 3.3:-57848438 | MS.gene049672:CDS |
| ATGCTGACGTTGATTCTGAT+GGG | 0.577383 | 3.3:-57849024 | MS.gene049672:CDS |
| GATCCGTATGAAAGAGGTGA+AGG | 0.578007 | 3.3:-57848772 | MS.gene049672:CDS |
| GACTTGGATCCGTATGAAAG+AGG | 0.580416 | 3.3:-57848778 | MS.gene049672:CDS |
| ATTATAGCTGCAAATCCACT+TGG | 0.581121 | 3.3:+57848226 | None:intergenic |
| GCTACTGTCAAAACAACCAA+AGG | 0.582398 | 3.3:-57849091 | MS.gene049672:CDS |
| AATGCTGACGTTGATTCTGA+TGG | 0.584439 | 3.3:-57849025 | MS.gene049672:CDS |
| TTTGTCTTCAGAAGCACCAA+GGG | 0.586501 | 3.3:+57844565 | None:intergenic |
| GAATTGCAAGAAGTAGCCAT+TGG | 0.586633 | 3.3:-57845259 | MS.gene049672:CDS |
| CAAAGATGGTGGTCAAATGA+GGG | 0.588098 | 3.3:-57849976 | MS.gene049672:CDS |
| TGCTTTGTTTGCAAAGATGG+TGG | 0.589994 | 3.3:-57849987 | MS.gene049672:CDS |
| TTTAAGTGACAGTGATGAAG+AGG | 0.590984 | 3.3:-57844321 | MS.gene049672:CDS |
| CGACTTGGATGGCACGTCAA+GGG | 0.592789 | 3.3:-57848695 | MS.gene049672:CDS |
| TCAATCATACAGTAAAGGAA+AGG | 0.592932 | 3.3:-57844397 | MS.gene049672:CDS |
| ATTCGTGGCTGTGGAACAAG+AGG | 0.594921 | 3.3:-57844221 | MS.gene049672:CDS |
| ACGACTTGGATGGCACGTCA+AGG | 0.595753 | 3.3:-57848696 | MS.gene049672:CDS |
| AATGACAATCGGTGGTGTTG+TGG | 0.596468 | 3.3:-57849370 | MS.gene049672:intron |
| TCTGACTCTGACGACTTGGA+TGG | 0.604386 | 3.3:-57848706 | MS.gene049672:CDS |
| TCCGTATGAAAGAGGTGAAG+GGG | 0.605656 | 3.3:-57848770 | MS.gene049672:CDS |
| TCTGGAAGAAAGAGAGTGGA+GGG | 0.610620 | 3.3:-57844275 | MS.gene049672:CDS |
| TTCATCTGGAAGAAAGAGAG+TGG | 0.613592 | 3.3:-57844279 | MS.gene049672:CDS |
| ATCTGGAAGAAAGAGAGTGG+AGG | 0.617982 | 3.3:-57844276 | MS.gene049672:CDS |
| CTTTGTCTTCAGAAGCACCA+AGG | 0.618281 | 3.3:+57844564 | None:intergenic |
| AAGAAGGAAGAGATCGCTGA+AGG | 0.618717 | 3.3:-57850014 | MS.gene049672:CDS |
| ATCCGTATGAAAGAGGTGAA+GGG | 0.624920 | 3.3:-57848771 | MS.gene049672:CDS |
| GCTTCTGAAGACAAAGATGA+TGG | 0.629492 | 3.3:-57844557 | MS.gene049672:CDS |
| AAGCAACCAGAAACCTCTGA+TGG | 0.633349 | 3.3:-57848148 | MS.gene049672:CDS |
| GGAGAGAATTGTAACTCTGG+AGG | 0.648805 | 3.3:-57845238 | MS.gene049672:CDS |
| ACTTTGATGCTCTACCGCAA+AGG | 0.655269 | 3.3:+57849173 | None:intergenic |
| GGGCCAATGAAAAGGGATGG+AGG | 0.657726 | 3.3:-57845564 | MS.gene049672:CDS |
| CTGTATCAGAGAATGACAGA+TGG | 0.657969 | 3.3:-57847309 | MS.gene049672:CDS |
| CGTTTGGAAGAGCTGCCAAG+TGG | 0.667248 | 3.3:-57848241 | MS.gene049672:CDS |
| TTGCTTTAAAGCCTATCATG+CGG | 0.669138 | 3.3:-57849425 | MS.gene049672:CDS |
| GGTAGATAATTGCTCAACAG+TGG | 0.676348 | 3.3:+57844586 | None:intergenic |
| TGCTGACGTTGATTCTGATG+GGG | 0.694280 | 3.3:-57849023 | MS.gene049672:intron |
| TACATGGCAGTGGATCTCAA+GGG | 0.715769 | 3.3:-57845617 | MS.gene049672:intron |
| TTCGTGGCTGTGGAACAAGA+GGG | 0.724248 | 3.3:-57844220 | MS.gene049672:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATAATTAAAATATATTT+TGG | + | chr3.3:57844876-57844895 | None:intergenic | 0.0% |
| !!! | ATAATAAGTTTTTTATATGT+TGG | + | chr3.3:57848237-57848256 | None:intergenic | 10.0% |
| !! | AACATTATTAAGAATTGTTT+AGG | - | chr3.3:57847801-57847820 | MS.gene049672:intron | 15.0% |
| !! | ATAAGCTTAAATCAATAAAT+AGG | - | chr3.3:57845469-57845488 | MS.gene049672:intron | 15.0% |
| !! | ATAATAAAGGCAAAAATAAA+CGG | + | chr3.3:57844785-57844804 | None:intergenic | 15.0% |
| !! | ATTAATAAAAACATCACAAA+AGG | + | chr3.3:57848588-57848607 | None:intergenic | 15.0% |
| !! | CTATCTTTACAATATAAAAA+GGG | + | chr3.3:57848116-57848135 | None:intergenic | 15.0% |
| !! | TATAATTAGGAATTAATCTA+TGG | + | chr3.3:57846757-57846776 | None:intergenic | 15.0% |
| !! | TCACATAATTATAAAACATA+TGG | + | chr3.3:57845165-57845184 | None:intergenic | 15.0% |
| !! | TCTATCTTTACAATATAAAA+AGG | + | chr3.3:57848117-57848136 | None:intergenic | 15.0% |
| !! | TGAGAATAATAAAACATTAA+AGG | + | chr3.3:57849276-57849295 | None:intergenic | 15.0% |
| !! | TTATCAAGTTATCAAAAAAA+AGG | - | chr3.3:57845251-57845270 | MS.gene049672:CDS | 15.0% |
| !! | TTATTAAGAAATGTTACATT+GGG | + | chr3.3:57847452-57847471 | None:intergenic | 15.0% |
| !!! | ACTTTTAATAAAAAGTTGTA+TGG | + | chr3.3:57846126-57846145 | None:intergenic | 15.0% |
| !!! | AGTAAGAATTTATTATTTTG+TGG | - | chr3.3:57846961-57846980 | MS.gene049672:intron | 15.0% |
| !!! | GTAGATTTTCTTAAAAATAT+TGG | - | chr3.3:57845546-57845565 | MS.gene049672:intron | 15.0% |
| !!! | TACTTACTGATATTTTAATT+AGG | - | chr3.3:57844324-57844343 | MS.gene049672:CDS | 15.0% |
| !!! | TTATTTTTGCCTTTATTATA+GGG | - | chr3.3:57844786-57844805 | MS.gene049672:intron | 15.0% |
| !!! | TTTATTTTTGCCTTTATTAT+AGG | - | chr3.3:57844785-57844804 | MS.gene049672:intron | 15.0% |
| !!! | TTTTACTTTTTTGAAGATTA+TGG | + | chr3.3:57846672-57846691 | None:intergenic | 15.0% |
| !! | AAAAAAGTAAAAATATGCCT+AGG | - | chr3.3:57846680-57846699 | MS.gene049672:intron | 20.0% |
| !! | AAAAACTTAAATGAAACTAG+TGG | + | chr3.3:57849407-57849426 | None:intergenic | 20.0% |
| !! | AAAGAATAACAAAAGAAAGA+AGG | - | chr3.3:57844087-57844106 | MS.gene049672:CDS | 20.0% |
| !! | AAATTGTCAGCATTAAATTA+AGG | + | chr3.3:57848664-57848683 | None:intergenic | 20.0% |
| !! | AAGTGAATAGCATTAATTTA+AGG | + | chr3.3:57847209-57847228 | None:intergenic | 20.0% |
| !! | AAGTTATCAAAAAAAAGGAA+GGG | - | chr3.3:57845256-57845275 | MS.gene049672:CDS | 20.0% |
| !! | AATAGATATATGAAAGAAGA+GGG | + | chr3.3:57848990-57849009 | None:intergenic | 20.0% |
| !! | AATTAGAGTTTGATTCTTTA+AGG | + | chr3.3:57849598-57849617 | None:intergenic | 20.0% |
| !! | AGGATATATTATATTGAACT+CGG | + | chr3.3:57849256-57849275 | None:intergenic | 20.0% |
| !! | AGTAACAAAAGATAAGAAAA+AGG | - | chr3.3:57845494-57845513 | MS.gene049672:intron | 20.0% |
| !! | ATATCAATATTATTGTGTTG+TGG | - | chr3.3:57848048-57848067 | MS.gene049672:intron | 20.0% |
| !! | ATATGTTGGAAAATAGTAAA+GGG | + | chr3.3:57848223-57848242 | None:intergenic | 20.0% |
| !! | CAGATATAATGCTTATAATT+AGG | + | chr3.3:57846770-57846789 | None:intergenic | 20.0% |
| !! | CTAATATTCATTATTTCGTT+TGG | - | chr3.3:57847298-57847317 | MS.gene049672:CDS | 20.0% |
| !! | CTTATTAAGAAATGTTACAT+TGG | + | chr3.3:57847453-57847472 | None:intergenic | 20.0% |
| !! | TAAAATCTGAAAAGATTTAC+AGG | + | chr3.3:57846939-57846958 | None:intergenic | 20.0% |
| !! | TATATGTTGGAAAATAGTAA+AGG | + | chr3.3:57848224-57848243 | None:intergenic | 20.0% |
| !! | TATATTTGATTCACTAATTG+AGG | - | chr3.3:57849354-57849373 | MS.gene049672:intron | 20.0% |
| !! | TCAATTAGTGAATCAAATAT+AGG | + | chr3.3:57849355-57849374 | None:intergenic | 20.0% |
| !! | TCTTAAACACATAAATATGT+AGG | + | chr3.3:57844846-57844865 | None:intergenic | 20.0% |
| !! | TGGAAATAAACAACATTAAA+AGG | + | chr3.3:57849203-57849222 | None:intergenic | 20.0% |
| !!! | AAAAGTATTCAAAAGTCATT+CGG | + | chr3.3:57844903-57844922 | None:intergenic | 20.0% |
| !!! | AATGTTTTATTATTCTCAAG+CGG | - | chr3.3:57849278-57849297 | MS.gene049672:intron | 20.0% |
| !!! | AATTTGTTTCATATTAACCA+AGG | + | chr3.3:57844400-57844419 | None:intergenic | 20.0% |
| !!! | GACTTTTGAATACTTTTTAT+AGG | - | chr3.3:57844906-57844925 | MS.gene049672:intron | 20.0% |
| !!! | GTTTGTGATTTTCTTTTTTA+TGG | - | chr3.3:57844656-57844675 | MS.gene049672:intron | 20.0% |
| !!! | TATGTTCTTTTATACTCTAA+AGG | + | chr3.3:57848436-57848455 | None:intergenic | 20.0% |
| ! | AAAAGTCAACATCAGAAATT+TGG | + | chr3.3:57846405-57846424 | None:intergenic | 25.0% |
| ! | AAATTAGGTTTCAGAATTGT+GGG | + | chr3.3:57846472-57846491 | None:intergenic | 25.0% |
| ! | AATATTAAAGTCACTTCATC+TGG | - | chr3.3:57849824-57849843 | MS.gene049672:intron | 25.0% |
| ! | AATGGAAAAATGTTGTGAAT+TGG | - | chr3.3:57848629-57848648 | MS.gene049672:CDS | 25.0% |
| ! | AATTGAATGCCCTATAATAA+AGG | + | chr3.3:57844798-57844817 | None:intergenic | 25.0% |
| ! | ACCTCATATTAAAAGCTAAA+TGG | - | chr3.3:57848611-57848630 | MS.gene049672:CDS | 25.0% |
| ! | ACTTAATAAACGTGATTGTT+CGG | + | chr3.3:57848754-57848773 | None:intergenic | 25.0% |
| ! | ACTTTCTATAATTTCTGCAA+TGG | + | chr3.3:57847386-57847405 | None:intergenic | 25.0% |
| ! | AGAAAATCACAAACAAACTT+TGG | + | chr3.3:57844650-57844669 | None:intergenic | 25.0% |
| ! | AGTGTATGGAAATATAGTTA+AGG | + | chr3.3:57848690-57848709 | None:intergenic | 25.0% |
| ! | AGTTTCAGTTATAAAAGAGA+GGG | - | chr3.3:57847753-57847772 | MS.gene049672:CDS | 25.0% |
| ! | AGTTTCAGTTATTAAAGAGA+GGG | - | chr3.3:57847701-57847720 | MS.gene049672:intron | 25.0% |
| ! | ATCTGTTGCATTTATATTTC+AGG | + | chr3.3:57847250-57847269 | None:intergenic | 25.0% |
| ! | ATTATAAGCATTATATCTGC+AGG | - | chr3.3:57846771-57846790 | MS.gene049672:intron | 25.0% |
| ! | CAAATTTAATAACTTTGCTG+AGG | - | chr3.3:57845679-57845698 | MS.gene049672:intron | 25.0% |
| ! | CAAGTTATCAAAAAAAAGGA+AGG | - | chr3.3:57845255-57845274 | MS.gene049672:CDS | 25.0% |
| ! | CAATAGATATATGAAAGAAG+AGG | + | chr3.3:57848991-57849010 | None:intergenic | 25.0% |
| ! | CATCTGATCATTTATGAATT+AGG | - | chr3.3:57846911-57846930 | MS.gene049672:intron | 25.0% |
| ! | GAAATATCTCAGAAAAGTAA+GGG | - | chr3.3:57847008-57847027 | MS.gene049672:intron | 25.0% |
| ! | TAAGTCATGAAAATTAACAC+AGG | + | chr3.3:57849462-57849481 | None:intergenic | 25.0% |
| ! | TAAGTCTCAAACTTTATCTA+TGG | + | chr3.3:57847118-57847137 | None:intergenic | 25.0% |
| ! | TATGGATACACAAATCATAT+CGG | + | chr3.3:57846654-57846673 | None:intergenic | 25.0% |
| ! | TCTTCTGTAAAAAGTCATTT+GGG | + | chr3.3:57846031-57846050 | None:intergenic | 25.0% |
| ! | TGAAATATCTCAGAAAAGTA+AGG | - | chr3.3:57847007-57847026 | MS.gene049672:intron | 25.0% |
| ! | TTATTCTTCTTTCTCTTTAC+TGG | + | chr3.3:57845453-57845472 | None:intergenic | 25.0% |
| ! | TTCTTCTGTAAAAAGTCATT+TGG | + | chr3.3:57846032-57846051 | None:intergenic | 25.0% |
| !! | AGATACATTTTACACATACT+TGG | + | chr3.3:57849431-57849450 | None:intergenic | 25.0% |
| !! | ATCAATTTCGGAAAAAGTTT+TGG | + | chr3.3:57845583-57845602 | None:intergenic | 25.0% |
| !! | ATTATGTGATTTTCATTTGC+AGG | - | chr3.3:57845176-57845195 | MS.gene049672:intron | 25.0% |
| !! | ATTTTATCAAGCATGTGTTA+AGG | + | chr3.3:57847278-57847297 | None:intergenic | 25.0% |
| !! | GATAAGAAAAAGGATTTTGT+TGG | - | chr3.3:57845504-57845523 | MS.gene049672:intron | 25.0% |
| !! | TGTGTTAATTTTCATGACTT+AGG | - | chr3.3:57849461-57849480 | MS.gene049672:intron | 25.0% |
| !! | TTTTGATACAATGTATGACT+TGG | + | chr3.3:57846237-57846256 | None:intergenic | 25.0% |
| !!! | AATGAGTTTCGATTTTAACT+TGG | + | chr3.3:57846513-57846532 | None:intergenic | 25.0% |
| !!! | ATTTTAGACGACATTGATTT+TGG | - | chr3.3:57847861-57847880 | MS.gene049672:intron | 25.0% |
| !!! | CTTTTTTATGGTTGATTACA+GGG | - | chr3.3:57844668-57844687 | MS.gene049672:intron | 25.0% |
| !!! | TAACCAAGGTTTAAGATTTT+GGG | + | chr3.3:57844386-57844405 | None:intergenic | 25.0% |
| !!! | TACATTTCCTTTACTTTTGT+TGG | - | chr3.3:57844817-57844836 | MS.gene049672:intron | 25.0% |
| !!! | TCATTGGTATGTTTTAATGT+TGG | - | chr3.3:57844621-57844640 | MS.gene049672:CDS | 25.0% |
| !!! | TCCATTTAGCTTTTAATATG+AGG | + | chr3.3:57848615-57848634 | None:intergenic | 25.0% |
| !!! | TCTTTTTTATGGTTGATTAC+AGG | - | chr3.3:57844667-57844686 | MS.gene049672:intron | 25.0% |
| !!! | TTAACCAAGGTTTAAGATTT+TGG | + | chr3.3:57844387-57844406 | None:intergenic | 25.0% |
| !!! | TTCCATTTTTAATGATGTCA+CGG | + | chr3.3:57845308-57845327 | None:intergenic | 25.0% |
| !!! | TTTTAGACGACATTGATTTT+GGG | - | chr3.3:57847862-57847881 | MS.gene049672:intron | 25.0% |
| AAGAAACACAATTTCACACA+AGG | + | chr3.3:57847893-57847912 | None:intergenic | 30.0% | |
| AAGTAAGTTTCAACTGTATC+TGG | + | chr3.3:57845222-57845241 | None:intergenic | 30.0% | |
| AATTCGCAATGTAATTCACA+TGG | - | chr3.3:57847569-57847588 | MS.gene049672:intron | 30.0% | |
| AGAAACACAATTTCACACAA+GGG | + | chr3.3:57847892-57847911 | None:intergenic | 30.0% | |
| AGTATGCTTATGTTTCTCAA+TGG | + | chr3.3:57847627-57847646 | None:intergenic | 30.0% | |
| ATAACACCAGCCAATATATT+TGG | + | chr3.3:57849147-57849166 | None:intergenic | 30.0% | |
| ATATCAGTAGTTCAGAAGAA+AGG | - | chr3.3:57845781-57845800 | MS.gene049672:intron | 30.0% | |
| ATATCTCCACATGGTTATTA+GGG | - | chr3.3:57847407-57847426 | MS.gene049672:intron | 30.0% | |
| ATCTTCTTATTCCTGTGATA+TGG | + | chr3.3:57846324-57846343 | None:intergenic | 30.0% | |
| ATTTAATAACTTTGCTGAGG+CGG | - | chr3.3:57845682-57845701 | MS.gene049672:intron | 30.0% | |
| CAGAAATCTGAGTATTAACA+TGG | - | chr3.3:57849694-57849713 | MS.gene049672:intron | 30.0% | |
| CATATATGTATCCATATCAC+AGG | - | chr3.3:57846310-57846329 | MS.gene049672:intron | 30.0% | |
| CATTAGAAAATGAACAATCG+GGG | + | chr3.3:57848383-57848402 | None:intergenic | 30.0% | |
| CCACTACTTTGATTGAAATT+AGG | + | chr3.3:57846487-57846506 | None:intergenic | 30.0% | |
| CCATTAGAAAATGAACAATC+GGG | + | chr3.3:57848384-57848403 | None:intergenic | 30.0% | |
| CCTAATTTCAATCAAAGTAG+TGG | - | chr3.3:57846484-57846503 | MS.gene049672:intron | 30.0% | |
| CGATGAAAAAAACTTATGCT+TGG | - | chr3.3:57846887-57846906 | MS.gene049672:intron | 30.0% | |
| GAAATTAGGTTTCAGAATTG+TGG | + | chr3.3:57846473-57846492 | None:intergenic | 30.0% | |
| GACTTAGAAGCCAAATATAT+TGG | - | chr3.3:57849134-57849153 | MS.gene049672:CDS | 30.0% | |
| GAGTAAAACATGTATTCTAG+AGG | + | chr3.3:57844265-57844284 | None:intergenic | 30.0% | |
| GAGTTTCAGTTATAAAAGAG+AGG | - | chr3.3:57847752-57847771 | MS.gene049672:CDS | 30.0% | |
| GAGTTTCAGTTATTAAAGAG+AGG | - | chr3.3:57847700-57847719 | MS.gene049672:intron | 30.0% | |
| GCATTAGTTGCAACATTTAT+TGG | - | chr3.3:57847667-57847686 | MS.gene049672:intron | 30.0% | |
| GCCATTAGAAAATGAACAAT+CGG | + | chr3.3:57848385-57848404 | None:intergenic | 30.0% | |
| GGAATATACATGAACAACTA+GGG | + | chr3.3:57846736-57846755 | None:intergenic | 30.0% | |
| GGTATTCGCTTAAAACTTAA+TGG | - | chr3.3:57846086-57846105 | MS.gene049672:intron | 30.0% | |
| GTAAAAATATGCCTAGGTTA+TGG | - | chr3.3:57846686-57846705 | MS.gene049672:intron | 30.0% | |
| GTATGCTTATGTTTCTCAAT+GGG | + | chr3.3:57847626-57847645 | None:intergenic | 30.0% | |
| GTATGTTAGCTAGTAAAAGA+AGG | + | chr3.3:57846274-57846293 | None:intergenic | 30.0% | |
| TAAAACTTGTCTACTTGAAG+AGG | - | chr3.3:57845925-57845944 | MS.gene049672:intron | 30.0% | |
| TACAGCAAACTTACTATAGT+TGG | + | chr3.3:57846847-57846866 | None:intergenic | 30.0% | |
| TAGAAAGTTATATCTCCACA+TGG | - | chr3.3:57847398-57847417 | MS.gene049672:intron | 30.0% | |
| TATATCTCCACATGGTTATT+AGG | - | chr3.3:57847406-57847425 | MS.gene049672:intron | 30.0% | |
| TATCAGTAGTTCAGAAGAAA+GGG | - | chr3.3:57845782-57845801 | MS.gene049672:intron | 30.0% | |
| TCAATCATACAGTAAAGGAA+AGG | - | chr3.3:57849720-57849739 | MS.gene049672:intron | 30.0% | |
| TGGAATATACATGAACAACT+AGG | + | chr3.3:57846737-57846756 | None:intergenic | 30.0% | |
| TGTTGCAACTAATGCATATT+TGG | + | chr3.3:57847662-57847681 | None:intergenic | 30.0% | |
| TTATCAAAAAAAAGGAAGGG+TGG | - | chr3.3:57845259-57845278 | MS.gene049672:CDS | 30.0% | |
| TTGAAGCTAATATGTGTCAA+TGG | - | chr3.3:57847486-57847505 | MS.gene049672:intron | 30.0% | |
| TTGAGCAAAACCATTATATG+TGG | + | chr3.3:57848913-57848932 | None:intergenic | 30.0% | |
| ! | AAAAAGGATTTTGTTGGATG+GGG | - | chr3.3:57845510-57845529 | MS.gene049672:intron | 30.0% |
| ! | AAACAACCAAAGGATTTTGT+AGG | - | chr3.3:57845036-57845055 | MS.gene049672:intron | 30.0% |
| ! | ACAGATTACCATCTTTTTCT+TGG | + | chr3.3:57845655-57845674 | None:intergenic | 30.0% |
| ! | AGAAAAAGGATTTTGTTGGA+TGG | - | chr3.3:57845508-57845527 | MS.gene049672:intron | 30.0% |
| ! | ATTTTCCACAAACAGCTATT+GGG | + | chr3.3:57844986-57845005 | None:intergenic | 30.0% |
| ! | CAGATTACCATCTTTTTCTT+GGG | + | chr3.3:57845654-57845673 | None:intergenic | 30.0% |
| ! | GAAAAAGGATTTTGTTGGAT+GGG | - | chr3.3:57845509-57845528 | MS.gene049672:intron | 30.0% |
| ! | TGTTACGAAATCGTATTGAT+CGG | - | chr3.3:57848532-57848551 | MS.gene049672:CDS | 30.0% |
| ! | TTTTGATCCCAAGAAAAAGA+TGG | - | chr3.3:57845644-57845663 | MS.gene049672:intron | 30.0% |
| !! | GATATAGTGTTACTTGATTG+AGG | + | chr3.3:57849653-57849672 | None:intergenic | 30.0% |
| !! | TCCATTTTTAATGATGTCAC+GGG | + | chr3.3:57845307-57845326 | None:intergenic | 30.0% |
| !! | TTATTTTTCACCGGAGATTT+CGG | + | chr3.3:57849488-57849507 | None:intergenic | 30.0% |
| !!! | AGTAAAGGGAGTTTTTTGTA+TGG | + | chr3.3:57848209-57848228 | None:intergenic | 30.0% |
| !!! | TCATCTTGGTTATTTTTCAC+CGG | + | chr3.3:57849497-57849516 | None:intergenic | 30.0% |
| !!! | TTTTCTGAGGTATCATTACT+TGG | - | chr3.3:57846421-57846440 | MS.gene049672:intron | 30.0% |
| AATTTACTTGAGCATGTGTC+AGG | - | chr3.3:57848290-57848309 | MS.gene049672:CDS | 35.0% | |
| ACACAAAGGTGGTTATCATT+TGG | + | chr3.3:57847961-57847980 | None:intergenic | 35.0% | |
| ACCTTAAACCCAGAAAAATG+TGG | - | chr3.3:57849623-57849642 | MS.gene049672:intron | 35.0% | |
| AGAGTTACAATTCTCTCCAA+TGG | + | chr3.3:57848877-57848896 | None:intergenic | 35.0% | |
| AGCTTGGTCATTACTATCAT+TGG | - | chr3.3:57844605-57844624 | MS.gene049672:CDS | 35.0% | |
| AGGCTTGATTGTGAAGAAAT+TGG | + | chr3.3:57847189-57847208 | None:intergenic | 35.0% | |
| ATCTTGTCAGAATGTACGTT+TGG | - | chr3.3:57845860-57845879 | MS.gene049672:intron | 35.0% | |
| ATTATAGCTGCAAATCCACT+TGG | + | chr3.3:57845894-57845913 | None:intergenic | 35.0% | |
| ATTGGAGAGAATTGTAACTC+TGG | - | chr3.3:57848876-57848895 | MS.gene049672:CDS | 35.0% | |
| ATTGTCATTCGTCAAAAAGG+AGG | + | chr3.3:57844736-57844755 | None:intergenic | 35.0% | |
| CAGTACCAAATAGGAATATC+AGG | + | chr3.3:57849869-57849888 | None:intergenic | 35.0% | |
| CTGTAAAAAGTCATTTGGGT+CGG | + | chr3.3:57846027-57846046 | None:intergenic | 35.0% | |
| CTTTACCGTACATATGTATC+AGG | - | chr3.3:57847089-57847108 | MS.gene049672:intron | 35.0% | |
| GAACAACTAGGGTAAGTTTA+TGG | + | chr3.3:57846725-57846744 | None:intergenic | 35.0% | |
| GATAAGAGAACAGATGTTGT+AGG | - | chr3.3:57848939-57848958 | MS.gene049672:intron | 35.0% | |
| GATATCACAAAGCATGTATG+TGG | - | chr3.3:57848024-57848043 | MS.gene049672:intron | 35.0% | |
| GATATCTTTATGCAGAGTTC+TGG | + | chr3.3:57848010-57848029 | None:intergenic | 35.0% | |
| GATCGAAGCAACATCAATTT+CGG | + | chr3.3:57845595-57845614 | None:intergenic | 35.0% | |
| GCAATCTAGTATGTGAACAT+GGG | - | chr3.3:57848166-57848185 | MS.gene049672:CDS | 35.0% | |
| GCATTCAAATTTCGAAAGCA+CGG | - | chr3.3:57845816-57845835 | MS.gene049672:intron | 35.0% | |
| GGATACCTGATACATATGTA+CGG | + | chr3.3:57847097-57847116 | None:intergenic | 35.0% | |
| GGATGTCAATCATACAGTAA+AGG | - | chr3.3:57849715-57849734 | MS.gene049672:intron | 35.0% | |
| GTTCCCAAAATCTTAAACCT+TGG | - | chr3.3:57844380-57844399 | MS.gene049672:CDS | 35.0% | |
| TAGAAGCCAAATATATTGGC+TGG | - | chr3.3:57849138-57849157 | MS.gene049672:CDS | 35.0% | |
| TAGGACACCAACAAAAGTAA+AGG | + | chr3.3:57844827-57844846 | None:intergenic | 35.0% | |
| TATAGAAGAGGCCATTTAAC+TGG | - | chr3.3:57847511-57847530 | MS.gene049672:intron | 35.0% | |
| TATTCCTATTTGGTACTGCT+CGG | - | chr3.3:57849871-57849890 | MS.gene049672:intron | 35.0% | |
| TCCAAAAGTAATTCCTGAAC+TGG | - | chr3.3:57848779-57848798 | MS.gene049672:CDS | 35.0% | |
| TCTGATGCAAGTGACTTTAT+AGG | - | chr3.3:57845387-57845406 | MS.gene049672:CDS | 35.0% | |
| TGCAATCTAGTATGTGAACA+TGG | - | chr3.3:57848165-57848184 | MS.gene049672:CDS | 35.0% | |
| TGGCTGATAGATACATCTTT+GGG | + | chr3.3:57846385-57846404 | None:intergenic | 35.0% | |
| TTACACGTAACAGGTAATCT+TGG | - | chr3.3:57846065-57846084 | MS.gene049672:intron | 35.0% | |
| TTGAGTACAGTCATTGGAAA+AGG | + | chr3.3:57849923-57849942 | None:intergenic | 35.0% | |
| TTGGCTGATAGATACATCTT+TGG | + | chr3.3:57846386-57846405 | None:intergenic | 35.0% | |
| TTTAAGTGACAGTGATGAAG+AGG | - | chr3.3:57849796-57849815 | MS.gene049672:intron | 35.0% | |
| TTTGTGGTTCAATATTCTGC+CGG | - | chr3.3:57846977-57846996 | MS.gene049672:intron | 35.0% | |
| ! | AAAGAAGAGGGAGTATAGAT+AGG | + | chr3.3:57848978-57848997 | None:intergenic | 35.0% |
| ! | ACCAGTTCAGGAATTACTTT+TGG | + | chr3.3:57848783-57848802 | None:intergenic | 35.0% |
| ! | AGAAGAAAGGGATGATAATG+AGG | - | chr3.3:57845794-57845813 | MS.gene049672:intron | 35.0% |
| ! | ATTTTTGAACCCATAACCTC+TGG | + | chr3.3:57844499-57844518 | None:intergenic | 35.0% |
| ! | CATTTTCCACAAACAGCTAT+TGG | + | chr3.3:57844987-57845006 | None:intergenic | 35.0% |
| ! | CCCGATTGTTCATTTTCTAA+TGG | - | chr3.3:57848381-57848400 | MS.gene049672:CDS | 35.0% |
| ! | CCTTTTTGACGAATGACAAT+CGG | - | chr3.3:57844736-57844755 | MS.gene049672:intron | 35.0% |
| ! | CTCAAGCTTATCTTTTCTTG+AGG | + | chr3.3:57848832-57848851 | None:intergenic | 35.0% |
| ! | CTTTTCTTCACATTGTCATG+CGG | - | chr3.3:57849074-57849093 | MS.gene049672:CDS | 35.0% |
| ! | GTTACGAAATCGTATTGATC+GGG | - | chr3.3:57848533-57848552 | MS.gene049672:CDS | 35.0% |
| ! | TGAGATATTTCAAGTACAGC+CGG | + | chr3.3:57846999-57847018 | None:intergenic | 35.0% |
| ! | TGTCTCTCTTTTGCTTTACA+TGG | - | chr3.3:57848484-57848503 | MS.gene049672:CDS | 35.0% |
| ! | TTTGATTCTTTAAGGAGTGC+AGG | + | chr3.3:57849590-57849609 | None:intergenic | 35.0% |
| ! | TTTTCTTGGGATCAAAAAGC+TGG | + | chr3.3:57845641-57845660 | None:intergenic | 35.0% |
| !! | TAATGGTTTTGCTCAATGTC+TGG | - | chr3.3:57848917-57848936 | MS.gene049672:CDS | 35.0% |
| !! | TGTTGCTTTGTTTGCAAAGA+TGG | - | chr3.3:57844127-57844146 | MS.gene049672:CDS | 35.0% |
| !! | TTGCTTTAAAGCCTATCATG+CGG | - | chr3.3:57844692-57844711 | MS.gene049672:intron | 35.0% |
| !!! | GATCAAAAAGCTGGTTTTTG+TGG | + | chr3.3:57845632-57845651 | None:intergenic | 35.0% |
| !!! | TAGTTAGTTTTGCTAGCAAG+AGG | - | chr3.3:57846150-57846169 | MS.gene049672:intron | 35.0% |
| !!! | TTCTGATGTTGACTTTTCTG+AGG | - | chr3.3:57846408-57846427 | MS.gene049672:intron | 35.0% |
| AAACATATGGAGAGAGTGAG+AGG | + | chr3.3:57845152-57845171 | None:intergenic | 40.0% | |
| AAAGCTGCAGCAGAATTTCT+TGG | + | chr3.3:57846354-57846373 | None:intergenic | 40.0% | |
| AAAGTCATTTGGGTCGGATT+TGG | + | chr3.3:57846021-57846040 | None:intergenic | 40.0% | |
| AAATGAGGGTCTGTGATTCT+AGG | - | chr3.3:57844155-57844174 | MS.gene049672:CDS | 40.0% | |
| ACCGCAAAGGTAGCAAAAAT+GGG | + | chr3.3:57844934-57844953 | None:intergenic | 40.0% | |
| ACTCAAACACTGGAGTGAAT+TGG | - | chr3.3:57849937-57849956 | MS.gene049672:intron | 40.0% | |
| AGAGAGTGAGAGGTAATACA+AGG | + | chr3.3:57845142-57845161 | None:intergenic | 40.0% | |
| AGATTGGTATCAACCAGTTC+AGG | + | chr3.3:57848795-57848814 | None:intergenic | 40.0% | |
| AGCAAGAAGCAACACATGAA+TGG | + | chr3.3:57849175-57849194 | None:intergenic | 40.0% | |
| AGGATGGAAGGGATATCTTA+AGG | + | chr3.3:57848356-57848375 | None:intergenic | 40.0% | |
| AGGGTCCTGATATTCCTATT+TGG | - | chr3.3:57849861-57849880 | MS.gene049672:intron | 40.0% | |
| ATATGCTCCCTTAGACTTCA+AGG | - | chr3.3:57849967-57849986 | MS.gene049672:CDS | 40.0% | |
| ATCAAGCATGTGTTAAGGTG+AGG | + | chr3.3:57847273-57847292 | None:intergenic | 40.0% | |
| ATCATTGACGATCGCCTTAA+TGG | + | chr3.3:57849768-57849787 | None:intergenic | 40.0% | |
| ATCCGTATGAAAGAGGTGAA+GGG | - | chr3.3:57845346-57845365 | MS.gene049672:CDS | 40.0% | |
| ATCTCTTCAAGCAAAACCAG+AGG | - | chr3.3:57844480-57844499 | MS.gene049672:CDS | 40.0% | |
| ATTCCTATTTGGTACTGCTC+GGG | - | chr3.3:57849872-57849891 | MS.gene049672:intron | 40.0% | |
| ATTGATCGGGCCAATGAAAA+GGG | - | chr3.3:57848546-57848565 | MS.gene049672:CDS | 40.0% | |
| CAAGAAGCAACACATGAATG+GGG | + | chr3.3:57849173-57849192 | None:intergenic | 40.0% | |
| CAAGCAAAACCAGAGGTTAT+GGG | - | chr3.3:57844487-57844506 | MS.gene049672:CDS | 40.0% | |
| CAATGACTGTACTCAAACAC+TGG | - | chr3.3:57849927-57849946 | MS.gene049672:intron | 40.0% | |
| CAGTGTTTGAGTACAGTCAT+TGG | + | chr3.3:57849929-57849948 | None:intergenic | 40.0% | |
| CCGATTGTCATTCGTCAAAA+AGG | + | chr3.3:57844739-57844758 | None:intergenic | 40.0% | |
| CGAAGAGTCAAAACATGTGT+TGG | + | chr3.3:57847338-57847357 | None:intergenic | 40.0% | |
| CTGTATCAGAGAATGACAGA+TGG | - | chr3.3:57846808-57846827 | MS.gene049672:intron | 40.0% | |
| CTTGAAGAGGAGCTTAATTG+AGG | - | chr3.3:57845938-57845957 | MS.gene049672:intron | 40.0% | |
| GAATTGCAAGAAGTAGCCAT+TGG | - | chr3.3:57848858-57848877 | MS.gene049672:CDS | 40.0% | |
| GCAAGAAGCAACACATGAAT+GGG | + | chr3.3:57849174-57849193 | None:intergenic | 40.0% | |
| GCACTTGGATGAGATTCTAA+AGG | - | chr3.3:57844457-57844476 | MS.gene049672:CDS | 40.0% | |
| GCATTGCCTACAAAATCCTT+TGG | + | chr3.3:57845045-57845064 | None:intergenic | 40.0% | |
| GCCCGTGACATCATTAAAAA+TGG | - | chr3.3:57845303-57845322 | MS.gene049672:CDS | 40.0% | |
| GCTACTGTCAAAACAACCAA+AGG | - | chr3.3:57845026-57845045 | MS.gene049672:intron | 40.0% | |
| GGAATCTTCTAGTGACAGAT+TGG | + | chr3.3:57848811-57848830 | None:intergenic | 40.0% | |
| GGACAGTACTCCACATATAA+TGG | - | chr3.3:57848900-57848919 | MS.gene049672:CDS | 40.0% | |
| GGTAGATAATTGCTCAACAG+TGG | + | chr3.3:57849534-57849553 | None:intergenic | 40.0% | |
| GTGTCAATGGCATATAGAAG+AGG | - | chr3.3:57847499-57847518 | MS.gene049672:intron | 40.0% | |
| GTTGAGCAATTATCTACCCT+TGG | - | chr3.3:57849536-57849555 | MS.gene049672:intron | 40.0% | |
| TAAAGAGAGGGAAGACTAGA+TGG | - | chr3.3:57847713-57847732 | MS.gene049672:CDS | 40.0% | |
| TACAGCAGAATCCATAACCT+AGG | + | chr3.3:57846700-57846719 | None:intergenic | 40.0% | |
| TACCGCAAAGGTAGCAAAAA+TGG | + | chr3.3:57844935-57844954 | None:intergenic | 40.0% | |
| TACTGTTTCGGATCCCATTA+AGG | - | chr3.3:57849751-57849770 | MS.gene049672:intron | 40.0% | |
| TATTGATCGGGCCAATGAAA+AGG | - | chr3.3:57848545-57848564 | MS.gene049672:CDS | 40.0% | |
| TCAAGCAAAACCAGAGGTTA+TGG | - | chr3.3:57844486-57844505 | MS.gene049672:CDS | 40.0% | |
| TCATTGACGATCGCCTTAAT+GGG | + | chr3.3:57849767-57849786 | None:intergenic | 40.0% | |
| TGGAAACATTAAGCGTGACT+TGG | - | chr3.3:57845323-57845342 | MS.gene049672:CDS | 40.0% | |
| TGGGCATGAAATGAAAAGAC+AGG | + | chr3.3:57847433-57847452 | None:intergenic | 40.0% | |
| TTCATCTGGAAGAAAGAGAG+TGG | - | chr3.3:57849838-57849857 | MS.gene049672:intron | 40.0% | |
| TTCCAGACCTTGAAGTCTAA+GGG | + | chr3.3:57849977-57849996 | None:intergenic | 40.0% | |
| TTCTGAATGAATCACCCTCT+AGG | + | chr3.3:57847782-57847801 | None:intergenic | 40.0% | |
| TTGAACTCGGACTGTGATAT+CGG | + | chr3.3:57849243-57849262 | None:intergenic | 40.0% | |
| ! | AAAGAGAGGCAATGCTTTTG+AGG | - | chr3.3:57850011-57850030 | MS.gene049672:CDS | 40.0% |
| ! | AAGAGAGGCAATGCTTTTGA+GGG | - | chr3.3:57850012-57850031 | MS.gene049672:CDS | 40.0% |
| ! | CAAAGATGGTGGTCAAATGA+GGG | - | chr3.3:57844141-57844160 | MS.gene049672:CDS | 40.0% |
| ! | GAGACTCAAGCTTCTGTTTT+TGG | + | chr3.3:57848728-57848747 | None:intergenic | 40.0% |
| ! | GCCACATTTTTCTGGGTTTA+AGG | + | chr3.3:57849627-57849646 | None:intergenic | 40.0% |
| ! | GCTTCTGAAGACAAAGATGA+TGG | - | chr3.3:57849560-57849579 | MS.gene049672:intron | 40.0% |
| ! | TATATCAACCTCAGAGCACT+TGG | - | chr3.3:57844442-57844461 | MS.gene049672:CDS | 40.0% |
| ! | TCCTTTTCCCACCAGTTAAA+TGG | + | chr3.3:57847525-57847544 | None:intergenic | 40.0% |
| ! | TCTTTTGCTTTACATGGCAG+TGG | - | chr3.3:57848490-57848509 | MS.gene049672:CDS | 40.0% |
| ! | TTTTGACGAATGACAATCGG+TGG | - | chr3.3:57844739-57844758 | MS.gene049672:intron | 40.0% |
| !! | AATGCTGACGTTGATTCTGA+TGG | - | chr3.3:57845092-57845111 | MS.gene049672:intron | 40.0% |
| !! | ATGCTGACGTTGATTCTGAT+GGG | - | chr3.3:57845093-57845112 | MS.gene049672:intron | 40.0% |
| !! | CATCTGCTTTTACACGTAAC+AGG | - | chr3.3:57846056-57846075 | MS.gene049672:intron | 40.0% |
| !! | TATGTTTCTCAATGGGCTGT+TGG | + | chr3.3:57847619-57847638 | None:intergenic | 40.0% |
| !! | TCCCATTTTTGCTACCTTTG+CGG | - | chr3.3:57844930-57844949 | MS.gene049672:intron | 40.0% |
| !! | TGCTTTGTTTGCAAAGATGG+TGG | - | chr3.3:57844130-57844149 | MS.gene049672:CDS | 40.0% |
| !! | TTTGTCTTCAGAAGCACCAA+GGG | + | chr3.3:57849555-57849574 | None:intergenic | 40.0% |
| AAAAGAGAGGGAAGCCTAGA+GGG | - | chr3.3:57847765-57847784 | MS.gene049672:CDS | 45.0% | |
| AAAGGAAGGGTGGAATTCTC+AGG | - | chr3.3:57845269-57845288 | MS.gene049672:CDS | 45.0% | |
| AACCTCTGATGGCAAAGTGT+TGG | - | chr3.3:57845980-57845999 | MS.gene049672:intron | 45.0% | |
| AACTGGTGGGAAAAGGAGAA+GGG | - | chr3.3:57847528-57847547 | MS.gene049672:intron | 45.0% | |
| AAGAAGGAAGAGATCGCTGA+AGG | - | chr3.3:57844103-57844122 | MS.gene049672:CDS | 45.0% | |
| AAGCAACCAGAAACCTCTGA+TGG | - | chr3.3:57845969-57845988 | MS.gene049672:intron | 45.0% | |
| AATCTCATCCAAGTGCTCTG+AGG | + | chr3.3:57844453-57844472 | None:intergenic | 45.0% | |
| ACAGATGTTGTAGGTCTGTC+AGG | - | chr3.3:57848948-57848967 | MS.gene049672:intron | 45.0% | |
| ACTGTGATATCGGAGTACGT+CGG | + | chr3.3:57849233-57849252 | None:intergenic | 45.0% | |
| ACTTTGATGCTCTACCGCAA+AGG | + | chr3.3:57844947-57844966 | None:intergenic | 45.0% | |
| ACTTTGCCATCAGAGGTTTC+TGG | + | chr3.3:57845978-57845997 | None:intergenic | 45.0% | |
| AGAAGAGGCCATTTAACTGG+TGG | - | chr3.3:57847514-57847533 | MS.gene049672:intron | 45.0% | |
| AGACTTCAAGGTCTGGAAGA+CGG | - | chr3.3:57849979-57849998 | MS.gene049672:CDS | 45.0% | |
| AGAGACTAATCTCTCGATCC+GGG | + | chr3.3:57844583-57844602 | None:intergenic | 45.0% | |
| ATACCCGAGCAGTACCAAAT+AGG | + | chr3.3:57849878-57849897 | None:intergenic | 45.0% | |
| ATCTGGAAGAAAGAGAGTGG+AGG | - | chr3.3:57849841-57849860 | MS.gene049672:intron | 45.0% | |
| CAGAGACTAATCTCTCGATC+CGG | + | chr3.3:57844584-57844603 | None:intergenic | 45.0% | |
| CCATACACTTGCTCAGTACA+TGG | - | chr3.3:57848701-57848720 | MS.gene049672:CDS | 45.0% | |
| CCATGTACTGAGCAAGTGTA+TGG | + | chr3.3:57848704-57848723 | None:intergenic | 45.0% | |
| CTTCCAGACCTTGAAGTCTA+AGG | + | chr3.3:57849978-57849997 | None:intergenic | 45.0% | |
| GAAGAGGCCATTTAACTGGT+GGG | - | chr3.3:57847515-57847534 | MS.gene049672:intron | 45.0% | |
| GACTTGGATCCGTATGAAAG+AGG | - | chr3.3:57845339-57845358 | MS.gene049672:CDS | 45.0% | |
| GATAATTGCTCAACAGTGGC+AGG | + | chr3.3:57849530-57849549 | None:intergenic | 45.0% | |
| GATCCGTATGAAAGAGGTGA+AGG | - | chr3.3:57845345-57845364 | MS.gene049672:CDS | 45.0% | |
| GCCATTTAACTGGTGGGAAA+AGG | - | chr3.3:57847521-57847540 | MS.gene049672:intron | 45.0% | |
| GGAGAGAATTGTAACTCTGG+AGG | - | chr3.3:57848879-57848898 | MS.gene049672:CDS | 45.0% | |
| TAAAAGAGAGGGAAGCCTAG+AGG | - | chr3.3:57847764-57847783 | MS.gene049672:CDS | 45.0% | |
| TAACTGGTGGGAAAAGGAGA+AGG | - | chr3.3:57847527-57847546 | MS.gene049672:intron | 45.0% | |
| TACATGGCAGTGGATCTCAA+GGG | - | chr3.3:57848500-57848519 | MS.gene049672:CDS | 45.0% | |
| TAGCTGGGTTTCTGATGTGA+AGG | - | chr3.3:57846589-57846608 | MS.gene049672:intron | 45.0% | |
| TCACATCAGAAACCCAGCTA+TGG | + | chr3.3:57846589-57846608 | None:intergenic | 45.0% | |
| TCCCCTTCACCTCTTTCATA+CGG | + | chr3.3:57845351-57845370 | None:intergenic | 45.0% | |
| TCCGTATGAAAGAGGTGAAG+GGG | - | chr3.3:57845347-57845366 | MS.gene049672:CDS | 45.0% | |
| TCTGGAAGAAAGAGAGTGGA+GGG | - | chr3.3:57849842-57849861 | MS.gene049672:intron | 45.0% | |
| TGACTTAGGTCCGAAATCTC+CGG | - | chr3.3:57849475-57849494 | MS.gene049672:intron | 45.0% | |
| TGTTGCCCAATAGCTGTTTG+TGG | - | chr3.3:57844978-57844997 | MS.gene049672:intron | 45.0% | |
| TTACATGGCAGTGGATCTCA+AGG | - | chr3.3:57848499-57848518 | MS.gene049672:CDS | 45.0% | |
| TTACTTGAGCATGTGTCAGG+AGG | - | chr3.3:57848293-57848312 | MS.gene049672:CDS | 45.0% | |
| TTTCACGCATTCCGCATGAT+AGG | + | chr3.3:57844706-57844725 | None:intergenic | 45.0% | |
| TTTGCCATTGTAGTCCTACC+CGG | - | chr3.3:57844562-57844581 | MS.gene049672:CDS | 45.0% | |
| ! | AAGGCGAAGCGTTACTGTTT+CGG | - | chr3.3:57849739-57849758 | MS.gene049672:intron | 45.0% |
| ! | AATGACAATCGGTGGTGTTG+TGG | - | chr3.3:57844747-57844766 | MS.gene049672:intron | 45.0% |
| ! | ACCTCTGATGGCAAAGTGTT+GGG | - | chr3.3:57845981-57846000 | MS.gene049672:intron | 45.0% |
| ! | GAAGTCTAAGGGAGCATATG+TGG | + | chr3.3:57849966-57849985 | None:intergenic | 45.0% |
| ! | GAGGCAAGCCACATTTTTCT+GGG | + | chr3.3:57849634-57849653 | None:intergenic | 45.0% |
| ! | GCAAAGATGGTGGTCAAATG+AGG | - | chr3.3:57844140-57844159 | MS.gene049672:CDS | 45.0% |
| ! | GCGGTAGAGCATCAAAGTTT+AGG | - | chr3.3:57844949-57844968 | MS.gene049672:intron | 45.0% |
| ! | TCTCCTCCATCCCTTTTCAT+TGG | + | chr3.3:57848559-57848578 | None:intergenic | 45.0% |
| ! | TGAGGCAAGCCACATTTTTC+TGG | + | chr3.3:57849635-57849654 | None:intergenic | 45.0% |
| !! | AGAGATTAGTCTCTGCAGCT+TGG | - | chr3.3:57844589-57844608 | MS.gene049672:CDS | 45.0% |
| !! | CTTTGTCTTCAGAAGCACCA+AGG | + | chr3.3:57849556-57849575 | None:intergenic | 45.0% |
| !! | TGCTGACGTTGATTCTGATG+GGG | - | chr3.3:57845094-57845113 | MS.gene049672:intron | 45.0% |
| !! | ATATTAAACATAAAAAAAAA+TGG | + | chr3.3:57846543-57846562 | None:intergenic | 5.0% |
| ACTAATCTCTCGATCCGGGT+AGG | + | chr3.3:57844579-57844598 | None:intergenic | 50.0% | |
| ATCGGGCCAATGAAAAGGGA+TGG | - | chr3.3:57848550-57848569 | MS.gene049672:CDS | 50.0% | |
| ATTCGTGGCTGTGGAACAAG+AGG | - | chr3.3:57849896-57849915 | MS.gene049672:intron | 50.0% | |
| CAGGAAAGGCTGGATCATCT+TGG | + | chr3.3:57849511-57849530 | None:intergenic | 50.0% | |
| CCACCTTTGTGTTTCACAGC+TGG | - | chr3.3:57847969-57847988 | MS.gene049672:intron | 50.0% | |
| CCAGCTGTGAAACACAAAGG+TGG | + | chr3.3:57847972-57847991 | None:intergenic | 50.0% | |
| CTCCCTTAGACTTCAAGGTC+TGG | - | chr3.3:57849972-57849991 | MS.gene049672:CDS | 50.0% | |
| GAAAAGGAGAAGGGTCACAC+GGG | - | chr3.3:57847537-57847556 | MS.gene049672:intron | 50.0% | |
| GACAGGCCCTAATAACCATG+TGG | + | chr3.3:57847416-57847435 | None:intergenic | 50.0% | |
| GACTTCAAGGTCTGGAAGAC+GGG | - | chr3.3:57849980-57849999 | MS.gene049672:CDS | 50.0% | |
| GAGGGTCTGTGATTCTAGGT+AGG | - | chr3.3:57844159-57844178 | MS.gene049672:CDS | 50.0% | |
| GCTCCAGCTGTGAAACACAA+AGG | + | chr3.3:57847975-57847994 | None:intergenic | 50.0% | |
| GGAAAAGGAGAAGGGTCACA+CGG | - | chr3.3:57847536-57847555 | MS.gene049672:intron | 50.0% | |
| GGTGAAGGGGAAGATGATAC+TGG | - | chr3.3:57845360-57845379 | MS.gene049672:CDS | 50.0% | |
| TCCCAACACTTTGCCATCAG+AGG | + | chr3.3:57845985-57846004 | None:intergenic | 50.0% | |
| TCCTGCGTAAGACCATAGCT+GGG | - | chr3.3:57846574-57846593 | MS.gene049672:intron | 50.0% | |
| TGATATCGGAGTACGTCGGT+AGG | + | chr3.3:57849229-57849248 | None:intergenic | 50.0% | |
| TTCCTGCGTAAGACCATAGC+TGG | - | chr3.3:57846573-57846592 | MS.gene049672:intron | 50.0% | |
| TTCGTGGCTGTGGAACAAGA+GGG | - | chr3.3:57849897-57849916 | MS.gene049672:intron | 50.0% | |
| TTGCTCAACAGTGGCAGGAA+AGG | + | chr3.3:57849525-57849544 | None:intergenic | 50.0% | |
| ! | AGGTTCTGACTCTGACGACT+TGG | - | chr3.3:57845407-57845426 | MS.gene049672:intron | 50.0% |
| ! | TCTGACTCTGACGACTTGGA+TGG | - | chr3.3:57845411-57845430 | MS.gene049672:intron | 50.0% |
| CGATCCGGGTAGGACTACAA+TGG | + | chr3.3:57844569-57844588 | None:intergenic | 55.0% | |
| CGGAGTACGTCGGTAGGAAA+TGG | + | chr3.3:57849223-57849242 | None:intergenic | 55.0% | |
| CGTTTGGAAGAGCTGCCAAG+TGG | - | chr3.3:57845876-57845895 | MS.gene049672:intron | 55.0% | |
| CTTGAGCATGTGTCAGGAGG+TGG | - | chr3.3:57848296-57848315 | MS.gene049672:CDS | 55.0% | |
| GGGCCAATGAAAAGGGATGG+AGG | - | chr3.3:57848553-57848572 | MS.gene049672:CDS | 55.0% | |
| TCAACAGTGGCAGGAAAGGC+TGG | + | chr3.3:57849521-57849540 | None:intergenic | 55.0% | |
| TGGTACTGCTCGGGTATTCG+TGG | - | chr3.3:57849881-57849900 | MS.gene049672:intron | 55.0% | |
| ! | ACCCAGCTATGGTCTTACGC+AGG | + | chr3.3:57846578-57846597 | None:intergenic | 55.0% |
| ! | ACGACTTGGATGGCACGTCA+AGG | - | chr3.3:57845421-57845440 | MS.gene049672:intron | 55.0% |
| ! | CGACTTGGATGGCACGTCAA+GGG | - | chr3.3:57845422-57845441 | MS.gene049672:intron | 55.0% |
| GACGGGCGAGAGTGAAAGAG+AGG | - | chr3.3:57849997-57850016 | MS.gene049672:CDS | 60.0% | |
| TGCTCGGGTATTCGTGGCTG+TGG | - | chr3.3:57849887-57849906 | MS.gene049672:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 57844079 | 57850060 | 57844079 | ID=MS.gene049672 |
| chr3.3 | mRNA | 57844079 | 57850060 | 57844079 | ID=MS.gene049672.t1;Parent=MS.gene049672 |
| chr3.3 | exon | 57849963 | 57850060 | 57849963 | ID=MS.gene049672.t1.exon1;Parent=MS.gene049672.t1 |
| chr3.3 | CDS | 57849963 | 57850060 | 57849963 | ID=cds.MS.gene049672.t1;Parent=MS.gene049672.t1 |
| chr3.3 | exon | 57849371 | 57849450 | 57849371 | ID=MS.gene049672.t1.exon2;Parent=MS.gene049672.t1 |
| chr3.3 | CDS | 57849371 | 57849450 | 57849371 | ID=cds.MS.gene049672.t1;Parent=MS.gene049672.t1 |
| chr3.3 | exon | 57849024 | 57849211 | 57849024 | ID=MS.gene049672.t1.exon3;Parent=MS.gene049672.t1 |
| chr3.3 | CDS | 57849024 | 57849211 | 57849024 | ID=cds.MS.gene049672.t1;Parent=MS.gene049672.t1 |
| chr3.3 | exon | 57848062 | 57848941 | 57848062 | ID=MS.gene049672.t1.exon4;Parent=MS.gene049672.t1 |
| chr3.3 | CDS | 57848062 | 57848941 | 57848062 | ID=cds.MS.gene049672.t1;Parent=MS.gene049672.t1 |
| chr3.3 | exon | 57847710 | 57847807 | 57847710 | ID=MS.gene049672.t1.exon5;Parent=MS.gene049672.t1 |
| chr3.3 | CDS | 57847710 | 57847807 | 57847710 | ID=cds.MS.gene049672.t1;Parent=MS.gene049672.t1 |
| chr3.3 | exon | 57847287 | 57847346 | 57847287 | ID=MS.gene049672.t1.exon6;Parent=MS.gene049672.t1 |
| chr3.3 | CDS | 57847287 | 57847346 | 57847287 | ID=cds.MS.gene049672.t1;Parent=MS.gene049672.t1 |
| chr3.3 | exon | 57846101 | 57846151 | 57846101 | ID=MS.gene049672.t1.exon7;Parent=MS.gene049672.t1 |
| chr3.3 | CDS | 57846101 | 57846151 | 57846101 | ID=cds.MS.gene049672.t1;Parent=MS.gene049672.t1 |
| chr3.3 | exon | 57845549 | 57845629 | 57845549 | ID=MS.gene049672.t1.exon8;Parent=MS.gene049672.t1 |
| chr3.3 | CDS | 57845549 | 57845629 | 57845549 | ID=cds.MS.gene049672.t1;Parent=MS.gene049672.t1 |
| chr3.3 | exon | 57845179 | 57845422 | 57845179 | ID=MS.gene049672.t1.exon9;Parent=MS.gene049672.t1 |
| chr3.3 | CDS | 57845179 | 57845422 | 57845179 | ID=cds.MS.gene049672.t1;Parent=MS.gene049672.t1 |
| chr3.3 | exon | 57844079 | 57844656 | 57844079 | ID=MS.gene049672.t1.exon10;Parent=MS.gene049672.t1 |
| chr3.3 | CDS | 57844079 | 57844656 | 57844079 | ID=cds.MS.gene049672.t1;Parent=MS.gene049672.t1 |
| Gene Sequence |
| Protein sequence |
