Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062754.t1 | XP_003589256.1 | 100 | 148 | 0 | 0 | 1 | 148 | 1 | 148 | 6.70E-82 | 313.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062754.t1 | P35135 | 93.2 | 147 | 10 | 0 | 1 | 147 | 1 | 147 | 1.6e-79 | 296.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062754.t1 | G7I4J0 | 100.0 | 148 | 0 | 0 | 1 | 148 | 1 | 148 | 4.8e-82 | 313.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050762 | MS.gene062754 | -0.818918 | 1.53E-52 | -1.69E-46 |
| MS.gene050763 | MS.gene062754 | -0.82144 | 4.03E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene062754 | -0.813827 | 2.10E-51 | -1.69E-46 |
| MS.gene054379 | MS.gene062754 | -0.810764 | 9.80E-51 | -1.69E-46 |
| MS.gene057469 | MS.gene062754 | -0.82516 | 5.45E-54 | -1.69E-46 |
| MS.gene057929 | MS.gene062754 | -0.814567 | 1.44E-51 | -1.69E-46 |
| MS.gene059664 | MS.gene062754 | -0.800625 | 1.32E-48 | -1.69E-46 |
| MS.gene060137 | MS.gene062754 | 0.824724 | 6.91E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062754.t1 | MTR_1g021150 | 100.000 | 148 | 0 | 0 | 1 | 148 | 1 | 148 | 1.54e-109 | 307 |
| MS.gene062754.t1 | MTR_7g116940 | 92.568 | 148 | 11 | 0 | 1 | 148 | 1 | 148 | 5.10e-103 | 291 |
| MS.gene062754.t1 | MTR_5g075580 | 91.892 | 148 | 12 | 0 | 1 | 148 | 1 | 148 | 5.88e-103 | 291 |
| MS.gene062754.t1 | MTR_3g062450 | 91.892 | 148 | 12 | 0 | 1 | 148 | 1 | 148 | 5.88e-103 | 291 |
| MS.gene062754.t1 | MTR_8g071040 | 90.541 | 148 | 14 | 0 | 1 | 148 | 1 | 148 | 5.01e-101 | 286 |
| MS.gene062754.t1 | MTR_7g116940 | 88.387 | 155 | 11 | 1 | 1 | 148 | 1 | 155 | 5.59e-100 | 283 |
| MS.gene062754.t1 | MTR_4g073240 | 88.514 | 148 | 17 | 0 | 1 | 148 | 1 | 148 | 6.90e-100 | 283 |
| MS.gene062754.t1 | MTR_1g021150 | 100.000 | 126 | 0 | 0 | 23 | 148 | 31 | 156 | 1.36e-92 | 265 |
| MS.gene062754.t1 | MTR_5g075580 | 92.437 | 119 | 9 | 0 | 30 | 148 | 1 | 119 | 1.59e-82 | 238 |
| MS.gene062754.t1 | MTR_4g073240 | 88.235 | 119 | 14 | 0 | 30 | 148 | 1 | 119 | 5.50e-79 | 229 |
| MS.gene062754.t1 | MTR_7g116940 | 89.908 | 109 | 11 | 0 | 1 | 109 | 1 | 109 | 7.75e-70 | 206 |
| MS.gene062754.t1 | MTR_8g085690 | 51.724 | 145 | 70 | 0 | 2 | 146 | 23 | 167 | 1.87e-55 | 171 |
| MS.gene062754.t1 | MTR_4g073240 | 86.585 | 82 | 11 | 0 | 66 | 147 | 4 | 85 | 8.80e-51 | 157 |
| MS.gene062754.t1 | MTR_2g078010 | 47.552 | 143 | 75 | 0 | 4 | 146 | 8 | 150 | 5.50e-46 | 147 |
| MS.gene062754.t1 | MTR_8g468530 | 46.575 | 146 | 73 | 1 | 2 | 142 | 21 | 166 | 2.24e-45 | 146 |
| MS.gene062754.t1 | MTR_4g108080 | 45.890 | 146 | 74 | 1 | 2 | 142 | 5 | 150 | 1.37e-44 | 143 |
| MS.gene062754.t1 | MTR_2g078010 | 43.312 | 157 | 75 | 1 | 4 | 146 | 8 | 164 | 5.16e-42 | 137 |
| MS.gene062754.t1 | MTR_3g098780 | 49.306 | 144 | 71 | 2 | 5 | 146 | 6 | 149 | 8.23e-42 | 137 |
| MS.gene062754.t1 | MTR_2g078010 | 46.715 | 137 | 73 | 0 | 4 | 140 | 8 | 144 | 8.63e-42 | 136 |
| MS.gene062754.t1 | MTR_3g098780 | 49.306 | 144 | 71 | 2 | 5 | 146 | 30 | 173 | 1.80e-41 | 137 |
| MS.gene062754.t1 | MTR_4g108080 | 48.571 | 105 | 54 | 0 | 2 | 106 | 5 | 109 | 3.74e-34 | 116 |
| MS.gene062754.t1 | MTR_1g095510 | 44.776 | 134 | 72 | 2 | 3 | 135 | 43 | 175 | 3.89e-34 | 118 |
| MS.gene062754.t1 | MTR_3g110110 | 40.816 | 147 | 83 | 3 | 5 | 147 | 7 | 153 | 4.02e-34 | 117 |
| MS.gene062754.t1 | MTR_4g076200 | 42.969 | 128 | 73 | 0 | 4 | 131 | 35 | 162 | 4.58e-33 | 115 |
| MS.gene062754.t1 | MTR_1g095510 | 46.154 | 117 | 62 | 1 | 19 | 135 | 6 | 121 | 1.41e-32 | 112 |
| MS.gene062754.t1 | MTR_1g095510 | 48.649 | 111 | 56 | 1 | 3 | 112 | 43 | 153 | 1.22e-31 | 111 |
| MS.gene062754.t1 | MTR_4g108080 | 47.706 | 109 | 52 | 1 | 39 | 142 | 42 | 150 | 1.42e-31 | 110 |
| MS.gene062754.t1 | MTR_5g009020 | 41.406 | 128 | 75 | 0 | 4 | 131 | 35 | 162 | 1.88e-31 | 110 |
| MS.gene062754.t1 | MTR_4g076200 | 45.455 | 110 | 60 | 0 | 22 | 131 | 12 | 121 | 2.93e-31 | 109 |
| MS.gene062754.t1 | MTR_4g094872 | 38.158 | 152 | 87 | 2 | 1 | 145 | 4 | 155 | 1.15e-30 | 108 |
| MS.gene062754.t1 | MTR_2g078010 | 46.535 | 101 | 54 | 0 | 4 | 104 | 8 | 108 | 4.32e-30 | 105 |
| MS.gene062754.t1 | MTR_5g016630 | 34.868 | 152 | 92 | 2 | 1 | 145 | 4 | 155 | 1.86e-27 | 100 |
| MS.gene062754.t1 | MTR_5g019480 | 36.765 | 136 | 83 | 2 | 5 | 139 | 36 | 169 | 3.56e-27 | 100 |
| MS.gene062754.t1 | MTR_5g019480 | 36.765 | 136 | 83 | 2 | 5 | 139 | 33 | 166 | 4.19e-27 | 100 |
| MS.gene062754.t1 | MTR_4g063490 | 34.815 | 135 | 74 | 2 | 15 | 135 | 18 | 152 | 1.96e-26 | 97.8 |
| MS.gene062754.t1 | MTR_5g019480 | 39.286 | 112 | 67 | 1 | 28 | 139 | 8 | 118 | 6.75e-26 | 95.5 |
| MS.gene062754.t1 | MTR_8g028920 | 34.959 | 123 | 78 | 2 | 26 | 146 | 25 | 147 | 4.14e-25 | 95.1 |
| MS.gene062754.t1 | MTR_7g087590 | 34.965 | 143 | 93 | 0 | 4 | 146 | 13 | 155 | 4.41e-25 | 97.1 |
| MS.gene062754.t1 | MTR_8g098595 | 38.182 | 110 | 66 | 2 | 39 | 146 | 23 | 132 | 2.84e-24 | 92.4 |
| MS.gene062754.t1 | MTR_2g096690 | 33.333 | 144 | 82 | 2 | 15 | 144 | 18 | 161 | 6.36e-24 | 91.7 |
| MS.gene062754.t1 | MTR_2g096690 | 38.983 | 118 | 58 | 2 | 15 | 118 | 18 | 135 | 2.16e-23 | 90.1 |
| MS.gene062754.t1 | MTR_4g106690 | 33.333 | 123 | 80 | 2 | 26 | 146 | 25 | 147 | 2.53e-23 | 90.5 |
| MS.gene062754.t1 | MTR_8g028920 | 37.736 | 106 | 64 | 2 | 43 | 146 | 3 | 108 | 1.28e-22 | 87.4 |
| MS.gene062754.t1 | MTR_8g076490 | 40.777 | 103 | 59 | 2 | 1 | 102 | 15 | 116 | 2.17e-19 | 79.7 |
| MS.gene062754.t1 | MTR_4g121960 | 34.188 | 117 | 71 | 3 | 2 | 114 | 11 | 125 | 1.58e-17 | 77.4 |
| MS.gene062754.t1 | MTR_5g021260 | 37.864 | 103 | 62 | 2 | 1 | 102 | 15 | 116 | 2.54e-17 | 74.3 |
| MS.gene062754.t1 | MTR_2g096690 | 37.374 | 99 | 48 | 2 | 15 | 99 | 18 | 116 | 2.93e-16 | 70.5 |
| MS.gene062754.t1 | MTR_8g023380 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 5.05e-16 | 72.4 |
| MS.gene062754.t1 | MTR_7g451800 | 36.066 | 122 | 68 | 3 | 4 | 115 | 38 | 159 | 5.53e-16 | 73.6 |
| MS.gene062754.t1 | MTR_7g047620 | 36.066 | 122 | 68 | 3 | 4 | 115 | 38 | 159 | 5.53e-16 | 73.6 |
| MS.gene062754.t1 | MTR_7g047570 | 36.066 | 122 | 68 | 3 | 4 | 115 | 38 | 159 | 1.21e-15 | 72.4 |
| MS.gene062754.t1 | MTR_7g451770 | 36.066 | 122 | 68 | 3 | 4 | 115 | 38 | 159 | 1.21e-15 | 72.4 |
| MS.gene062754.t1 | MTR_1g028540 | 73.913 | 46 | 12 | 0 | 102 | 147 | 83 | 128 | 9.36e-15 | 66.6 |
| MS.gene062754.t1 | MTR_7g023760 | 30.081 | 123 | 76 | 3 | 3 | 115 | 90 | 212 | 9.08e-14 | 67.0 |
| MS.gene062754.t1 | MTR_0274s0030 | 30.894 | 123 | 75 | 3 | 3 | 115 | 113 | 235 | 2.10e-13 | 66.2 |
| MS.gene062754.t1 | MTR_4g020620 | 32.520 | 123 | 73 | 3 | 3 | 115 | 570 | 692 | 3.45e-13 | 66.2 |
| MS.gene062754.t1 | MTR_4g020620 | 32.520 | 123 | 73 | 3 | 3 | 115 | 628 | 750 | 3.66e-13 | 65.9 |
| MS.gene062754.t1 | MTR_4g088835 | 28.667 | 150 | 94 | 4 | 4 | 143 | 672 | 818 | 4.12e-13 | 65.9 |
| MS.gene062754.t1 | MTR_4g086440 | 32.787 | 122 | 72 | 3 | 4 | 115 | 37 | 158 | 4.92e-13 | 65.1 |
| MS.gene062754.t1 | MTR_1g092465 | 30.263 | 152 | 80 | 6 | 3 | 144 | 241 | 376 | 7.45e-13 | 65.1 |
| MS.gene062754.t1 | MTR_2g013650 | 27.815 | 151 | 96 | 4 | 3 | 143 | 681 | 828 | 1.11e-12 | 64.7 |
| MS.gene062754.t1 | MTR_1g073600 | 26.606 | 109 | 66 | 2 | 33 | 140 | 25 | 120 | 1.47e-12 | 61.2 |
| MS.gene062754.t1 | MTR_2g079270 | 29.268 | 123 | 77 | 3 | 3 | 115 | 306 | 428 | 2.56e-11 | 60.5 |
| MS.gene062754.t1 | MTR_1g092460 | 27.642 | 123 | 79 | 3 | 3 | 115 | 176 | 298 | 2.81e-11 | 60.5 |
| MS.gene062754.t1 | MTR_1g092440 | 33.696 | 92 | 51 | 3 | 34 | 115 | 411 | 502 | 3.85e-11 | 60.1 |
| MS.gene062754.t1 | MTR_0332s0040 | 33.028 | 109 | 62 | 4 | 35 | 133 | 188 | 295 | 6.37e-11 | 59.3 |
| MS.gene062754.t1 | MTR_1g112730 | 32.609 | 92 | 52 | 3 | 34 | 115 | 886 | 977 | 8.08e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062754.t1 | AT1G64230 | 91.216 | 148 | 13 | 0 | 1 | 148 | 1 | 148 | 4.68e-103 | 291 |
| MS.gene062754.t1 | AT1G64230 | 91.216 | 148 | 13 | 0 | 1 | 148 | 1 | 148 | 4.68e-103 | 291 |
| MS.gene062754.t1 | AT5G53300 | 91.892 | 148 | 12 | 0 | 1 | 148 | 1 | 148 | 1.33e-102 | 290 |
| MS.gene062754.t1 | AT5G53300 | 91.892 | 148 | 12 | 0 | 1 | 148 | 1 | 148 | 1.33e-102 | 290 |
| MS.gene062754.t1 | AT5G53300 | 91.892 | 148 | 12 | 0 | 1 | 148 | 1 | 148 | 1.33e-102 | 290 |
| MS.gene062754.t1 | AT5G41700 | 91.216 | 148 | 13 | 0 | 1 | 148 | 1 | 148 | 1.53e-102 | 290 |
| MS.gene062754.t1 | AT5G41700 | 91.216 | 148 | 13 | 0 | 1 | 148 | 1 | 148 | 1.53e-102 | 290 |
| MS.gene062754.t1 | AT5G41700 | 91.216 | 148 | 13 | 0 | 1 | 148 | 1 | 148 | 1.53e-102 | 290 |
| MS.gene062754.t1 | AT4G27960 | 91.216 | 148 | 13 | 0 | 1 | 148 | 1 | 148 | 3.20e-102 | 289 |
| MS.gene062754.t1 | AT4G27960 | 91.216 | 148 | 13 | 0 | 1 | 148 | 31 | 178 | 1.33e-101 | 288 |
| MS.gene062754.t1 | AT3G08690 | 89.189 | 148 | 16 | 0 | 1 | 148 | 1 | 148 | 3.01e-100 | 284 |
| MS.gene062754.t1 | AT3G08690 | 89.189 | 148 | 16 | 0 | 1 | 148 | 1 | 148 | 3.01e-100 | 284 |
| MS.gene062754.t1 | AT5G56150 | 88.514 | 148 | 17 | 0 | 1 | 148 | 1 | 148 | 5.14e-100 | 283 |
| MS.gene062754.t1 | AT5G41700 | 89.933 | 149 | 14 | 1 | 1 | 148 | 1 | 149 | 1.01e-99 | 283 |
| MS.gene062754.t1 | AT1G64230 | 85.350 | 157 | 14 | 1 | 1 | 148 | 1 | 157 | 2.12e-98 | 280 |
| MS.gene062754.t1 | AT2G16740 | 85.714 | 147 | 21 | 0 | 1 | 147 | 1 | 147 | 9.05e-97 | 275 |
| MS.gene062754.t1 | AT1G64230 | 70.526 | 190 | 14 | 1 | 1 | 148 | 1 | 190 | 5.22e-94 | 270 |
| MS.gene062754.t1 | AT1G64230 | 70.526 | 190 | 14 | 1 | 1 | 148 | 1 | 190 | 5.22e-94 | 270 |
| MS.gene062754.t1 | AT3G08700 | 77.181 | 149 | 33 | 1 | 1 | 148 | 1 | 149 | 5.02e-86 | 248 |
| MS.gene062754.t1 | AT3G08700 | 77.181 | 149 | 33 | 1 | 1 | 148 | 1 | 149 | 5.02e-86 | 248 |
| MS.gene062754.t1 | AT5G41700 | 91.346 | 104 | 9 | 0 | 1 | 104 | 1 | 104 | 7.42e-70 | 207 |
| MS.gene062754.t1 | AT5G53300 | 88.991 | 109 | 10 | 1 | 1 | 107 | 1 | 109 | 5.90e-69 | 204 |
| MS.gene062754.t1 | AT5G56150 | 89.320 | 103 | 11 | 0 | 1 | 103 | 1 | 103 | 9.04e-68 | 201 |
| MS.gene062754.t1 | AT3G13550 | 48.276 | 145 | 75 | 0 | 2 | 146 | 37 | 181 | 2.56e-53 | 167 |
| MS.gene062754.t1 | AT1G16890 | 48.951 | 143 | 73 | 0 | 4 | 146 | 8 | 150 | 2.32e-47 | 150 |
| MS.gene062754.t1 | AT5G62540 | 51.880 | 133 | 64 | 0 | 2 | 134 | 5 | 137 | 9.06e-47 | 149 |
| MS.gene062754.t1 | AT1G78870 | 48.252 | 143 | 74 | 0 | 4 | 146 | 8 | 150 | 1.79e-46 | 148 |
| MS.gene062754.t1 | AT1G14400 | 46.575 | 146 | 73 | 1 | 2 | 142 | 5 | 150 | 4.26e-45 | 145 |
| MS.gene062754.t1 | AT1G14400 | 46.575 | 146 | 73 | 1 | 2 | 142 | 5 | 150 | 4.26e-45 | 145 |
| MS.gene062754.t1 | AT1G36340 | 47.619 | 147 | 76 | 1 | 2 | 148 | 9 | 154 | 6.70e-45 | 144 |
| MS.gene062754.t1 | AT1G36340 | 47.619 | 147 | 76 | 1 | 2 | 148 | 9 | 154 | 6.70e-45 | 144 |
| MS.gene062754.t1 | AT2G02760 | 45.890 | 146 | 74 | 1 | 2 | 142 | 5 | 150 | 1.01e-44 | 144 |
| MS.gene062754.t1 | AT2G02760 | 45.890 | 146 | 74 | 1 | 2 | 142 | 5 | 150 | 1.01e-44 | 144 |
| MS.gene062754.t1 | AT2G02760 | 45.890 | 146 | 74 | 1 | 2 | 142 | 5 | 150 | 1.01e-44 | 144 |
| MS.gene062754.t1 | AT2G02760 | 45.890 | 146 | 74 | 1 | 2 | 142 | 5 | 150 | 1.01e-44 | 144 |
| MS.gene062754.t1 | AT1G16890 | 46.711 | 152 | 72 | 1 | 4 | 146 | 8 | 159 | 1.36e-44 | 144 |
| MS.gene062754.t1 | AT3G13550 | 50.877 | 114 | 56 | 0 | 2 | 115 | 37 | 150 | 9.17e-43 | 139 |
| MS.gene062754.t1 | AT1G16890 | 52.174 | 115 | 55 | 0 | 32 | 146 | 3 | 117 | 8.53e-41 | 133 |
| MS.gene062754.t1 | AT1G78870 | 52.174 | 115 | 55 | 0 | 32 | 146 | 3 | 117 | 1.24e-40 | 132 |
| MS.gene062754.t1 | AT5G50870 | 46.528 | 144 | 75 | 2 | 5 | 146 | 6 | 149 | 5.79e-39 | 130 |
| MS.gene062754.t1 | AT1G78870 | 51.724 | 116 | 55 | 1 | 32 | 146 | 3 | 118 | 8.27e-39 | 128 |
| MS.gene062754.t1 | AT5G50870 | 43.226 | 155 | 75 | 3 | 5 | 146 | 6 | 160 | 1.55e-35 | 122 |
| MS.gene062754.t1 | AT3G24515 | 43.312 | 157 | 76 | 3 | 3 | 146 | 8 | 164 | 4.93e-35 | 125 |
| MS.gene062754.t1 | AT2G32790 | 47.333 | 150 | 70 | 4 | 2 | 146 | 30 | 175 | 1.31e-34 | 119 |
| MS.gene062754.t1 | AT5G25760 | 39.456 | 147 | 85 | 3 | 5 | 147 | 7 | 153 | 1.03e-32 | 113 |
| MS.gene062754.t1 | AT5G25760 | 39.456 | 147 | 85 | 3 | 5 | 147 | 7 | 153 | 1.03e-32 | 113 |
| MS.gene062754.t1 | AT3G24515 | 37.912 | 182 | 75 | 4 | 3 | 146 | 8 | 189 | 2.90e-32 | 119 |
| MS.gene062754.t1 | AT1G78870 | 46.667 | 105 | 56 | 0 | 4 | 108 | 8 | 112 | 4.06e-31 | 108 |
| MS.gene062754.t1 | AT3G57870 | 38.816 | 152 | 86 | 3 | 1 | 145 | 5 | 156 | 1.41e-30 | 108 |
| MS.gene062754.t1 | AT3G20060 | 41.406 | 128 | 75 | 0 | 4 | 131 | 39 | 166 | 2.42e-30 | 108 |
| MS.gene062754.t1 | AT1G50490 | 42.188 | 128 | 74 | 0 | 4 | 131 | 38 | 165 | 6.39e-30 | 107 |
| MS.gene062754.t1 | AT3G20060 | 42.017 | 119 | 67 | 1 | 13 | 131 | 5 | 121 | 1.07e-28 | 102 |
| MS.gene062754.t1 | AT2G46030 | 36.486 | 148 | 91 | 3 | 1 | 146 | 1 | 147 | 7.33e-28 | 102 |
| MS.gene062754.t1 | AT2G46030 | 36.486 | 148 | 91 | 3 | 1 | 146 | 1 | 147 | 7.33e-28 | 102 |
| MS.gene062754.t1 | AT2G46030 | 39.024 | 123 | 73 | 2 | 26 | 146 | 28 | 150 | 1.98e-27 | 101 |
| MS.gene062754.t1 | AT2G46030 | 39.024 | 123 | 73 | 2 | 26 | 146 | 28 | 150 | 1.98e-27 | 101 |
| MS.gene062754.t1 | AT2G46030 | 36.486 | 148 | 91 | 3 | 1 | 146 | 73 | 219 | 2.05e-27 | 102 |
| MS.gene062754.t1 | AT5G05080 | 37.063 | 143 | 90 | 0 | 4 | 146 | 13 | 155 | 2.65e-27 | 102 |
| MS.gene062754.t1 | AT5G05080 | 37.063 | 143 | 90 | 0 | 4 | 146 | 13 | 155 | 2.65e-27 | 102 |
| MS.gene062754.t1 | AT5G05080 | 37.063 | 143 | 90 | 0 | 4 | 146 | 13 | 155 | 2.65e-27 | 102 |
| MS.gene062754.t1 | AT5G05080 | 37.063 | 143 | 90 | 0 | 4 | 146 | 13 | 155 | 2.65e-27 | 102 |
| MS.gene062754.t1 | AT4G36800 | 38.686 | 137 | 79 | 4 | 5 | 139 | 34 | 167 | 2.68e-27 | 100 |
| MS.gene062754.t1 | AT4G36800 | 38.686 | 137 | 79 | 4 | 5 | 139 | 34 | 167 | 2.68e-27 | 100 |
| MS.gene062754.t1 | AT3G55380 | 36.296 | 135 | 72 | 2 | 15 | 135 | 19 | 153 | 8.15e-27 | 99.0 |
| MS.gene062754.t1 | AT1G63800 | 40.000 | 110 | 64 | 2 | 39 | 146 | 23 | 132 | 3.97e-25 | 94.7 |
| MS.gene062754.t1 | AT1G63800 | 40.000 | 110 | 64 | 2 | 39 | 146 | 38 | 147 | 4.29e-25 | 95.1 |
| MS.gene062754.t1 | AT5G41340 | 35.772 | 123 | 77 | 2 | 26 | 146 | 25 | 147 | 4.50e-25 | 95.1 |
| MS.gene062754.t1 | AT5G59300 | 34.028 | 144 | 81 | 2 | 15 | 144 | 18 | 161 | 1.43e-24 | 93.2 |
| MS.gene062754.t1 | AT3G46460 | 33.333 | 144 | 82 | 2 | 15 | 144 | 18 | 161 | 2.27e-24 | 92.8 |
| MS.gene062754.t1 | AT2G18600 | 35.036 | 137 | 84 | 4 | 5 | 139 | 35 | 168 | 3.77e-23 | 90.1 |
| MS.gene062754.t1 | AT2G18600 | 35.036 | 137 | 84 | 4 | 5 | 139 | 35 | 168 | 3.77e-23 | 90.1 |
| MS.gene062754.t1 | AT5G41340 | 38.462 | 104 | 62 | 2 | 45 | 146 | 9 | 112 | 2.22e-22 | 87.0 |
| MS.gene062754.t1 | AT3G17000 | 36.752 | 117 | 68 | 3 | 2 | 114 | 12 | 126 | 1.41e-19 | 83.2 |
| MS.gene062754.t1 | AT3G55380 | 28.402 | 169 | 73 | 3 | 15 | 135 | 19 | 187 | 2.28e-19 | 80.5 |
| MS.gene062754.t1 | AT1G75440 | 39.815 | 108 | 59 | 3 | 1 | 107 | 15 | 117 | 2.52e-18 | 77.0 |
| MS.gene062754.t1 | AT1G45050 | 38.835 | 103 | 61 | 2 | 1 | 102 | 15 | 116 | 9.17e-18 | 75.5 |
| MS.gene062754.t1 | AT5G42990 | 39.806 | 103 | 60 | 2 | 1 | 102 | 15 | 116 | 1.18e-17 | 75.1 |
| MS.gene062754.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 3.87e-17 | 75.5 |
| MS.gene062754.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 3.87e-17 | 75.5 |
| MS.gene062754.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 3.87e-17 | 75.5 |
| MS.gene062754.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 3.87e-17 | 75.5 |
| MS.gene062754.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 3.87e-17 | 75.5 |
| MS.gene062754.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 3.87e-17 | 75.5 |
| MS.gene062754.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 3.87e-17 | 75.5 |
| MS.gene062754.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 3.87e-17 | 75.5 |
| MS.gene062754.t1 | AT4G36410 | 37.037 | 108 | 62 | 3 | 1 | 107 | 15 | 117 | 5.56e-17 | 73.6 |
| MS.gene062754.t1 | AT5G50430 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 6.21e-17 | 75.1 |
| MS.gene062754.t1 | AT5G50430 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 6.21e-17 | 75.1 |
| MS.gene062754.t1 | AT3G46460 | 29.730 | 111 | 65 | 1 | 47 | 144 | 9 | 119 | 4.13e-16 | 70.1 |
| MS.gene062754.t1 | AT3G46460 | 29.730 | 111 | 65 | 1 | 47 | 144 | 9 | 119 | 4.13e-16 | 70.1 |
| MS.gene062754.t1 | AT1G17280 | 32.520 | 123 | 68 | 3 | 4 | 115 | 8 | 126 | 8.56e-16 | 72.0 |
Find 48 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTACCTTTGGTGGCTTAAA+TGG | 0.184645 | 1.4:-3121493 | None:intergenic |
| CTCCCATTGCTGTTGATGTT+AGG | 0.317472 | 1.4:-3122284 | None:intergenic |
| TTGTACATGTGGGCAATATC+AGG | 0.375872 | 1.4:-3122889 | None:intergenic |
| TCAGGCACCAAAGGATCATC+TGG | 0.377413 | 1.4:-3122871 | None:intergenic |
| CCTCCTGTGTCTTGCAGTGC+TGG | 0.380892 | 1.4:+3120379 | MS.gene062754:CDS |
| GGTGGCTTAAATGGATAATC+TGG | 0.389530 | 1.4:-3121484 | None:intergenic |
| TGAAACAGGTCTTCACCAAC+AGG | 0.427366 | 1.4:-3121385 | None:intergenic |
| TCCCATTGCTGTTGATGTTA+GGG | 0.427658 | 1.4:-3122283 | None:intergenic |
| TAGTAGCTTGCCAATGAAAC+AGG | 0.428793 | 1.4:-3121399 | None:intergenic |
| TACTAGATAGTTACCTTTGG+TGG | 0.430453 | 1.4:-3121502 | None:intergenic |
| TCCAAACCCAGATGATCCTT+TGG | 0.446078 | 1.4:+3122864 | MS.gene062754:CDS |
| ATGAGACTACTGCCCGGTCT+TGG | 0.466598 | 1.4:+3122929 | MS.gene062754:CDS |
| ACCAAAGGATCATCTGGGTT+TGG | 0.469354 | 1.4:-3122865 | None:intergenic |
| TTGGTGAAGACCTGTTTCAT+TGG | 0.470566 | 1.4:+3121389 | MS.gene062754:CDS |
| ACGCATTACTAAGGAGTTGA+AGG | 0.472891 | 1.4:+3120342 | MS.gene062754:CDS |
| ACCCTAACATCAACAGCAAT+GGG | 0.488484 | 1.4:+3122282 | MS.gene062754:CDS |
| TCATTGGCAAGCTACTATCA+TGG | 0.489308 | 1.4:+3121405 | MS.gene062754:CDS |
| CATATTTCTGAGTCCAAGAC+CGG | 0.489374 | 1.4:-3122942 | None:intergenic |
| CCGGGCAGTAGTCTCATACT+TGG | 0.490655 | 1.4:-3122923 | None:intergenic |
| GGCCTCAAAACGCATTACTA+AGG | 0.503308 | 1.4:+3120333 | MS.gene062754:CDS |
| AGGAATACACCACCAGCATA+AGG | 0.516668 | 1.4:-3121442 | None:intergenic |
| TATACTCATGCAGGCCCTGT+TGG | 0.522486 | 1.4:+3121370 | MS.gene062754:intron |
| CTTTGTCAGTCTTGTACATG+TGG | 0.533650 | 1.4:-3122900 | None:intergenic |
| TCCTGCTCTTACTGTTTCGA+AGG | 0.541092 | 1.4:+3122340 | MS.gene062754:CDS |
| CACCCTAACATCAACAGCAA+TGG | 0.544450 | 1.4:+3122281 | MS.gene062754:CDS |
| CATTGGCAAGCTACTATCAT+GGG | 0.548045 | 1.4:+3121406 | MS.gene062754:CDS |
| GCAGAGAGCAAATTGACAGC+AGG | 0.555230 | 1.4:-3122834 | None:intergenic |
| GCAAGCTACTATCATGGGAC+CGG | 0.562370 | 1.4:+3121411 | MS.gene062754:CDS |
| GGCTTAAATGGATAATCTGG+TGG | 0.570933 | 1.4:-3121481 | None:intergenic |
| ACCTTCGAAACAGTAAGAGC+AGG | 0.586563 | 1.4:-3122341 | None:intergenic |
| CCGGCAGACAGTCCTTATGC+TGG | 0.594140 | 1.4:+3121430 | MS.gene062754:CDS |
| GTGGGAAGTGAATGGTCACT+AGG | 0.600222 | 1.4:-3121462 | None:intergenic |
| CCAGCATAAGGACTGTCTGC+CGG | 0.604386 | 1.4:-3121430 | None:intergenic |
| CATTGCTGTTGATGTTAGGG+TGG | 0.612271 | 1.4:-3122280 | None:intergenic |
| TGGGCAATATCAGGCACCAA+AGG | 0.612823 | 1.4:-3122880 | None:intergenic |
| TTATCCATTTAAGCCACCAA+AGG | 0.622832 | 1.4:+3121489 | MS.gene062754:CDS |
| GCAGACAGTCCTTATGCTGG+TGG | 0.624021 | 1.4:+3121433 | MS.gene062754:CDS |
| ATAATCTGGTGGGAAGTGAA+TGG | 0.636084 | 1.4:-3121470 | None:intergenic |
| GCTTAAATGGATAATCTGGT+GGG | 0.637843 | 1.4:-3121480 | None:intergenic |
| CAGGCACCAAAGGATCATCT+GGG | 0.640642 | 1.4:-3122870 | None:intergenic |
| TTGACATTCTGAAAGAGCAG+TGG | 0.642055 | 1.4:+3122315 | MS.gene062754:CDS |
| CCAAGTATGAGACTACTGCC+CGG | 0.645693 | 1.4:+3122923 | MS.gene062754:CDS |
| TTTGTCAGTCTTGTACATGT+GGG | 0.652799 | 1.4:-3122899 | None:intergenic |
| ATACCAGCACTGCAAGACAC+AGG | 0.653347 | 1.4:-3120382 | None:intergenic |
| CCAGCACTGCAAGACACAGG+AGG | 0.655706 | 1.4:-3120379 | None:intergenic |
| ATATTTCTGAGTCCAAGACC+GGG | 0.658098 | 1.4:-3122941 | None:intergenic |
| CAGCACTGCAAGACACAGGA+GGG | 0.671340 | 1.4:-3120378 | None:intergenic |
| GAAACAGGTCTTCACCAACA+GGG | 0.724000 | 1.4:-3121384 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAAAAACTATTTGAT+GGG | + | chr1.4:3121012-3121031 | MS.gene062754:intron | 10.0% |
| !! | ATCTATACAACAAATATTAA+AGG | - | chr1.4:3122058-3122077 | None:intergenic | 15.0% |
| !! | CAAAATTAAAAACTATTTGA+TGG | + | chr1.4:3121011-3121030 | MS.gene062754:intron | 15.0% |
| !! | TATAATATATAAAGATAACG+AGG | - | chr1.4:3121354-3121373 | None:intergenic | 15.0% |
| !!! | AATATTTCATTTTCTATACT+TGG | + | chr1.4:3122575-3122594 | MS.gene062754:intron | 15.0% |
| !!! | CATCAAATAGTTTTTAATTT+TGG | - | chr1.4:3121013-3121032 | None:intergenic | 15.0% |
| !!! | TGTTTTGAAAATAATGTTTT+TGG | + | chr1.4:3122195-3122214 | MS.gene062754:intron | 15.0% |
| !! | AAAAAGTTAACATGTTCTTA+TGG | + | chr1.4:3120491-3120510 | MS.gene062754:intron | 20.0% |
| !! | AAACTATTGCTTAAAATCTA+TGG | + | chr1.4:3122536-3122555 | MS.gene062754:intron | 20.0% |
| !! | ATGATTCAACAAAGAAAATA+TGG | - | chr1.4:3120558-3120577 | None:intergenic | 20.0% |
| !! | ATTGAAATCAATATGTACTT+GGG | + | chr1.4:3121700-3121719 | MS.gene062754:intron | 20.0% |
| !! | TATTGAAATCAATATGTACT+TGG | + | chr1.4:3121699-3121718 | MS.gene062754:intron | 20.0% |
| !! | TTTATATATTATACTCATGC+AGG | + | chr1.4:3121361-3121380 | MS.gene062754:intron | 20.0% |
| !!! | ATATAATCATCTAAGATTCT+TGG | + | chr1.4:3121565-3121584 | MS.gene062754:intron | 20.0% |
| !!! | ATCTTTTATATTCAAGTATC+TGG | - | chr1.4:3122004-3122023 | None:intergenic | 20.0% |
| !!! | GAAAATAATGTTTTTGGTTT+AGG | + | chr1.4:3122201-3122220 | MS.gene062754:intron | 20.0% |
| !!! | TAAGAACATGTTAACTTTTT+TGG | - | chr1.4:3120491-3120510 | None:intergenic | 20.0% |
| !!! | TTAATTGTTCTTGTTTATCT+GGG | + | chr1.4:3121852-3121871 | MS.gene062754:intron | 20.0% |
| !!! | TTACCCAGTTTTTTATATAA+GGG | + | chr1.4:3122686-3122705 | MS.gene062754:intron | 20.0% |
| !!! | TTTAATTGTTCTTGTTTATC+TGG | + | chr1.4:3121851-3121870 | MS.gene062754:intron | 20.0% |
| !!! | TTTACCCAGTTTTTTATATA+AGG | + | chr1.4:3122685-3122704 | MS.gene062754:intron | 20.0% |
| !!! | TTTTTACTTCTGAATTAACT+TGG | - | chr1.4:3122518-3122537 | None:intergenic | 20.0% |
| ! | AAATATTGAAACAACAGGAA+TGG | - | chr1.4:3120446-3120465 | None:intergenic | 25.0% |
| ! | AATATTGAAACAACAGGAAT+GGG | - | chr1.4:3120445-3120464 | None:intergenic | 25.0% |
| ! | ACAAATATTTGTAAAGAGGA+AGG | - | chr1.4:3120534-3120553 | None:intergenic | 25.0% |
| ! | ACCATGTCTCAATATTAAAA+TGG | - | chr1.4:3121900-3121919 | None:intergenic | 25.0% |
| ! | ACTTCCCTTATATAAAAAAC+TGG | - | chr1.4:3122693-3122712 | None:intergenic | 25.0% |
| ! | ATTACTTGAGAAGAATAAAG+TGG | + | chr1.4:3122726-3122745 | MS.gene062754:intron | 25.0% |
| ! | CTGAGGTAATTAAAAAATTC+TGG | - | chr1.4:3122758-3122777 | None:intergenic | 25.0% |
| ! | CTTCCCTTATATAAAAAACT+GGG | - | chr1.4:3122692-3122711 | None:intergenic | 25.0% |
| ! | GATAGGTATATTGATGTTTA+TGG | + | chr1.4:3122454-3122473 | MS.gene062754:intron | 25.0% |
| ! | TAACTATCTAGTAATGAGAT+GGG | + | chr1.4:3121512-3121531 | MS.gene062754:intron | 25.0% |
| ! | TGCTTAAATTATTCACAATG+CGG | + | chr1.4:3122225-3122244 | MS.gene062754:intron | 25.0% |
| ! | TTACTTGAGAAGAATAAAGT+GGG | + | chr1.4:3122727-3122746 | MS.gene062754:intron | 25.0% |
| ! | TTATGGAAAAAAGTCTTGAT+AGG | + | chr1.4:3122437-3122456 | MS.gene062754:intron | 25.0% |
| ! | TTCCAATCAAACAATCATAT+AGG | + | chr1.4:3121189-3121208 | MS.gene062754:intron | 25.0% |
| !! | GTTTTATCTTGACTATTTGT+GGG | + | chr1.4:3121067-3121086 | MS.gene062754:intron | 25.0% |
| !! | TGTTTTATCTTGACTATTTG+TGG | + | chr1.4:3121066-3121085 | MS.gene062754:intron | 25.0% |
| !!! | AGATTCTTGGTTTTTAATTG+TGG | + | chr1.4:3121578-3121597 | MS.gene062754:intron | 25.0% |
| !!! | ATGTTTGTGCTTTTTACTTA+TGG | + | chr1.4:3122420-3122439 | MS.gene062754:intron | 25.0% |
| !!! | TCTTTTGCCATTTTCAAATA+TGG | + | chr1.4:3120604-3120623 | MS.gene062754:intron | 25.0% |
| !!! | TTCTGAAATATTGAAACAAC+AGG | - | chr1.4:3120451-3120470 | None:intergenic | 25.0% |
| AACATGTTCTTATGGTATTC+TGG | + | chr1.4:3120499-3120518 | MS.gene062754:intron | 30.0% | |
| ATGTTTATGGAGAAGTTGAA+TGG | + | chr1.4:3122467-3122486 | MS.gene062754:intron | 30.0% | |
| ATTATTACAGTAGACAGTTG+TGG | + | chr1.4:3122781-3122800 | MS.gene062754:intron | 30.0% | |
| CATTACTAGATAGTTACCTT+TGG | - | chr1.4:3121508-3121527 | None:intergenic | 30.0% | |
| GATATTTATAGCATGCTTGT+AGG | + | chr1.4:3122075-3122094 | MS.gene062754:intron | 30.0% | |
| GGGTCACATAATTGTATAAA+AGG | + | chr1.4:3121032-3121051 | MS.gene062754:intron | 30.0% | |
| GTAACTATCTAGTAATGAGA+TGG | + | chr1.4:3121511-3121530 | MS.gene062754:intron | 30.0% | |
| GTCCTATATGATTGTTTGAT+TGG | - | chr1.4:3121194-3121213 | None:intergenic | 30.0% | |
| TAAAAAACTGGGTAAAAGCT+AGG | - | chr1.4:3122681-3122700 | None:intergenic | 30.0% | |
| TAGCAAGCCATATTTGAAAA+TGG | - | chr1.4:3120614-3120633 | None:intergenic | 30.0% | |
| TCTACTGTAATAATCAACTG+AGG | - | chr1.4:3122775-3122794 | None:intergenic | 30.0% | |
| TGGCACAAATATTTGTAAAG+AGG | - | chr1.4:3120538-3120557 | None:intergenic | 30.0% | |
| ! | GAAGCTTCTTTTCTATGTAT+AGG | + | chr1.4:3121323-3121342 | MS.gene062754:intron | 30.0% |
| !! | GACTATATAGTAGCCATTTT+AGG | - | chr1.4:3121252-3121271 | None:intergenic | 30.0% |
| !! | GCCATTTTAATATTGAGACA+TGG | + | chr1.4:3121896-3121915 | MS.gene062754:intron | 30.0% |
| !!! | AGTTTTTTCTAGTTAGCTGT+TGG | + | chr1.4:3122614-3122633 | MS.gene062754:intron | 30.0% |
| AAAGCCAAAAATCCGACATA+TGG | + | chr1.4:3120668-3120687 | MS.gene062754:intron | 35.0% | |
| AATCCATGTTACCACAATTG+AGG | - | chr1.4:3121678-3121697 | None:intergenic | 35.0% | |
| AATGCATTATTGCGAAAGTC+GGG | + | chr1.4:3120805-3120824 | MS.gene062754:intron | 35.0% | |
| ATATCAAAGCAGAACCTTCA+TGG | + | chr1.4:3121947-3121966 | MS.gene062754:intron | 35.0% | |
| ATCTACTGTCCATCAAATCT+AGG | - | chr1.4:3120926-3120945 | None:intergenic | 35.0% | |
| ATGGTTCATGTCATTGACAT+AGG | + | chr1.4:3121966-3121985 | MS.gene062754:intron | 35.0% | |
| CAATAAGTTAATCCCAACCA+AGG | - | chr1.4:3122378-3122397 | None:intergenic | 35.0% | |
| CATCTTGTCTGAACTGTATT+GGG | + | chr1.4:3120862-3120881 | MS.gene062754:intron | 35.0% | |
| CGCAATAATGCATTCATATC+AGG | - | chr1.4:3120799-3120818 | None:intergenic | 35.0% | |
| CTTCTCGCACACTTAAAAAT+AGG | + | chr1.4:3121112-3121131 | MS.gene062754:intron | 35.0% | |
| GAATGCATTATTGCGAAAGT+CGG | + | chr1.4:3120804-3120823 | MS.gene062754:intron | 35.0% | |
| GATAAGGATCCTAGATTTGA+TGG | + | chr1.4:3120914-3120933 | MS.gene062754:intron | 35.0% | |
| GATTTATCTTGTATTGCTGC+AGG | + | chr1.4:3122810-3122829 | MS.gene062754:intron | 35.0% | |
| GATTTATTGCAACCTCGATA+AGG | + | chr1.4:3120898-3120917 | MS.gene062754:intron | 35.0% | |
| GCTTAAATGGATAATCTGGT+GGG | - | chr1.4:3121483-3121502 | None:intergenic | 35.0% | |
| TACGATAATATGCCTTGGTT+GGG | + | chr1.4:3122363-3122382 | MS.gene062754:intron | 35.0% | |
| TACTAGATAGTTACCTTTGG+TGG | - | chr1.4:3121505-3121524 | None:intergenic | 35.0% | |
| TATGGAGAAGTTGAATGGTA+GGG | + | chr1.4:3122472-3122491 | MS.gene062754:intron | 35.0% | |
| TCTAACATTACGTGTGAATC+AGG | + | chr1.4:3121137-3121156 | MS.gene062754:intron | 35.0% | |
| TGATTCACACGTAATGTTAG+AGG | - | chr1.4:3121138-3121157 | None:intergenic | 35.0% | |
| TGTATTGCTAAGGTCAAATG+CGG | + | chr1.4:3121614-3121633 | MS.gene062754:intron | 35.0% | |
| TTATCCATTTAAGCCACCAA+AGG | + | chr1.4:3121489-3121508 | MS.gene062754:CDS | 35.0% | |
| TTATGGAGAAGTTGAATGGT+AGG | + | chr1.4:3122471-3122490 | MS.gene062754:intron | 35.0% | |
| TTGTTGTCATGATGTAGTTG+AGG | + | chr1.4:3121652-3121671 | MS.gene062754:intron | 35.0% | |
| TTTGACCTTAGCAATACATC+CGG | - | chr1.4:3121612-3121631 | None:intergenic | 35.0% | |
| ! | ATCTTTTCTCCCTTTTCTTG+AGG | + | chr1.4:3122134-3122153 | MS.gene062754:intron | 35.0% |
| ! | TGAGAGCATGATTTGATACA+AGG | + | chr1.4:3121160-3121179 | MS.gene062754:intron | 35.0% |
| ! | TTTGTCAGTCTTGTACATGT+GGG | - | chr1.4:3122902-3122921 | None:intergenic | 35.0% |
| AAAGAAGCTTCAAGCGTACT+TGG | - | chr1.4:3121314-3121333 | None:intergenic | 40.0% | |
| AACTCCGTTCCTCAAGAAAA+GGG | - | chr1.4:3122146-3122165 | None:intergenic | 40.0% | |
| AATATGTACTTGGGCTGATG+TGG | + | chr1.4:3121709-3121728 | MS.gene062754:intron | 40.0% | |
| AATCCATGTGACCACAATTG+AGG | - | chr1.4:3121764-3121783 | None:intergenic | 40.0% | |
| AATGGCTAAACGCAATGACA+TGG | - | chr1.4:3121882-3121901 | None:intergenic | 40.0% | |
| ACCCTAACATCAACAGCAAT+GGG | + | chr1.4:3122282-3122301 | MS.gene062754:CDS | 40.0% | |
| ACGCATTACTAAGGAGTTGA+AGG | + | chr1.4:3120342-3120361 | MS.gene062754:CDS | 40.0% | |
| ACTGTGGAATTTGGAGAGAT+GGG | + | chr1.4:3120837-3120856 | MS.gene062754:intron | 40.0% | |
| ATAATCTGGTGGGAAGTGAA+TGG | - | chr1.4:3121473-3121492 | None:intergenic | 40.0% | |
| ATCTCTCCAAATTCCACAGT+AGG | - | chr1.4:3120837-3120856 | None:intergenic | 40.0% | |
| ATGTCATTGACATAGGCTGA+TGG | + | chr1.4:3121973-3121992 | MS.gene062754:intron | 40.0% | |
| ATTGAAACAACAGGAATGGG+TGG | - | chr1.4:3120442-3120461 | None:intergenic | 40.0% | |
| CATTGGCAAGCTACTATCAT+GGG | + | chr1.4:3121406-3121425 | MS.gene062754:CDS | 40.0% | |
| GCATCTTGTCTGAACTGTAT+TGG | + | chr1.4:3120861-3120880 | MS.gene062754:intron | 40.0% | |
| GGCTTAAATGGATAATCTGG+TGG | - | chr1.4:3121484-3121503 | None:intergenic | 40.0% | |
| GGTGGCTTAAATGGATAATC+TGG | - | chr1.4:3121487-3121506 | None:intergenic | 40.0% | |
| GTACGATAATATGCCTTGGT+TGG | + | chr1.4:3122362-3122381 | MS.gene062754:intron | 40.0% | |
| GTCAATGACATGAACCATGA+AGG | - | chr1.4:3121964-3121983 | None:intergenic | 40.0% | |
| TACTGTGGAATTTGGAGAGA+TGG | + | chr1.4:3120836-3120855 | MS.gene062754:intron | 40.0% | |
| TCATTGGCAAGCTACTATCA+TGG | + | chr1.4:3121405-3121424 | MS.gene062754:CDS | 40.0% | |
| TCTCATGCTCTCACCTAAAA+TGG | + | chr1.4:3121236-3121255 | MS.gene062754:intron | 40.0% | |
| TGTCATTGACATAGGCTGAT+GGG | + | chr1.4:3121974-3121993 | MS.gene062754:intron | 40.0% | |
| TTGAAACAACAGGAATGGGT+GGG | - | chr1.4:3120441-3120460 | None:intergenic | 40.0% | |
| TTGACCTTAGCAATACATCC+GGG | - | chr1.4:3121611-3121630 | None:intergenic | 40.0% | |
| TTGGTGAAGACCTGTTTCAT+TGG | + | chr1.4:3121389-3121408 | MS.gene062754:CDS | 40.0% | |
| TTGTACATGTGGGCAATATC+AGG | - | chr1.4:3122892-3122911 | None:intergenic | 40.0% | |
| TTGTGGTCATGTTGTAGTTG+AGG | + | chr1.4:3121738-3121757 | MS.gene062754:intron | 40.0% | |
| TTTAATTGTGGTCTGTGTCC+CGG | + | chr1.4:3121590-3121609 | MS.gene062754:intron | 40.0% | |
| ! | ATATTTCTGAGTCCAAGACC+GGG | - | chr1.4:3122944-3122963 | None:intergenic | 40.0% |
| ! | ATTCACAATGCGGCTTTTGT+AGG | + | chr1.4:3122235-3122254 | MS.gene062754:intron | 40.0% |
| ! | CAAATCTAGGATCCTTATCG+AGG | - | chr1.4:3120913-3120932 | None:intergenic | 40.0% |
| ! | CATATTTCTGAGTCCAAGAC+CGG | - | chr1.4:3122945-3122964 | None:intergenic | 40.0% |
| ! | CTCCTTAGTAATGCGTTTTG+AGG | - | chr1.4:3120338-3120357 | None:intergenic | 40.0% |
| ! | CTTTGTCAGTCTTGTACATG+TGG | - | chr1.4:3122903-3122922 | None:intergenic | 40.0% |
| ! | GAAGGTACGATAATATGCCT+TGG | + | chr1.4:3122358-3122377 | MS.gene062754:intron | 40.0% |
| ! | GTGGAACACTTTTGTTCGAA+AGG | - | chr1.4:3122264-3122283 | None:intergenic | 40.0% |
| ! | GTTACCTTTGGTGGCTTAAA+TGG | - | chr1.4:3121496-3121515 | None:intergenic | 40.0% |
| ! | TAGTAGCTTGCCAATGAAAC+AGG | - | chr1.4:3121402-3121421 | None:intergenic | 40.0% |
| ! | TCCCATTGCTGTTGATGTTA+GGG | - | chr1.4:3122286-3122305 | None:intergenic | 40.0% |
| ! | TGCATTCATATCAGGCATTG+AGG | - | chr1.4:3120791-3120810 | None:intergenic | 40.0% |
| ! | TTCTCCCTTTTCTTGAGGAA+CGG | + | chr1.4:3122139-3122158 | MS.gene062754:intron | 40.0% |
| ! | TTGACATTCTGAAAGAGCAG+TGG | + | chr1.4:3122315-3122334 | MS.gene062754:CDS | 40.0% |
| ! | TTTTCTCCTCTTACTCTCGA+CGG | - | chr1.4:3120958-3120977 | None:intergenic | 40.0% |
| !! | CTTATGGTATTCTGGAGCAT+TGG | + | chr1.4:3120507-3120526 | MS.gene062754:intron | 40.0% |
| AAAGTGGCAGATAACAGCCA+TGG | + | chr1.4:3120707-3120726 | MS.gene062754:intron | 45.0% | |
| AACTGGGTAAAAGCTAGGCA+AGG | - | chr1.4:3122676-3122695 | None:intergenic | 45.0% | |
| ACCAAAGGATCATCTGGGTT+TGG | - | chr1.4:3122868-3122887 | None:intergenic | 45.0% | |
| ACCCATCACAAAATTGGCCA+TGG | - | chr1.4:3120764-3120783 | None:intergenic | 45.0% | |
| ACCTTCGAAACAGTAAGAGC+AGG | - | chr1.4:3122344-3122363 | None:intergenic | 45.0% | |
| AGGAATACACCACCAGCATA+AGG | - | chr1.4:3121445-3121464 | None:intergenic | 45.0% | |
| AGGCCTCAATTGTGGTAACA+TGG | + | chr1.4:3121672-3121691 | MS.gene062754:intron | 45.0% | |
| CAACTCCGTTCCTCAAGAAA+AGG | - | chr1.4:3122147-3122166 | None:intergenic | 45.0% | |
| CACCCTAACATCAACAGCAA+TGG | + | chr1.4:3122281-3122300 | MS.gene062754:CDS | 45.0% | |
| CATCACAAAATTGGCCATGG+CGG | - | chr1.4:3120761-3120780 | None:intergenic | 45.0% | |
| GAAACAGGTCTTCACCAACA+GGG | - | chr1.4:3121387-3121406 | None:intergenic | 45.0% | |
| GAGAGAGATAGACTGTGCAA+TGG | - | chr1.4:3120413-3120432 | None:intergenic | 45.0% | |
| GGCCTCAAAACGCATTACTA+AGG | + | chr1.4:3120333-3120352 | MS.gene062754:CDS | 45.0% | |
| GGCTGATGTGGATTCAATTG+TGG | + | chr1.4:3121721-3121740 | MS.gene062754:intron | 45.0% | |
| GTCATCAGTGTTATCGACAG+CGG | + | chr1.4:3120645-3120664 | MS.gene062754:intron | 45.0% | |
| TAGAAACCGTCGAGAGTAAG+AGG | + | chr1.4:3120949-3120968 | MS.gene062754:intron | 45.0% | |
| TCAGCACCTACTGTGGAATT+TGG | + | chr1.4:3120828-3120847 | MS.gene062754:intron | 45.0% | |
| TCCAAACCCAGATGATCCTT+TGG | + | chr1.4:3122864-3122883 | MS.gene062754:CDS | 45.0% | |
| TCCTGCTCTTACTGTTTCGA+AGG | + | chr1.4:3122340-3122359 | MS.gene062754:CDS | 45.0% | |
| TGAAACAGGTCTTCACCAAC+AGG | - | chr1.4:3121388-3121407 | None:intergenic | 45.0% | |
| TGTAGTTGAGGCCTCAATTG+TGG | + | chr1.4:3121664-3121683 | MS.gene062754:intron | 45.0% | |
| ! | CATTGCTGTTGATGTTAGGG+TGG | - | chr1.4:3122283-3122302 | None:intergenic | 45.0% |
| ! | CTCCCATTGCTGTTGATGTT+AGG | - | chr1.4:3122287-3122306 | None:intergenic | 45.0% |
| ! | CTTTTCTTGAGGAACGGAGT+TGG | + | chr1.4:3122145-3122164 | MS.gene062754:intron | 45.0% |
| ! | GCCATGGCCAATTTTGTGAT+GGG | + | chr1.4:3120760-3120779 | MS.gene062754:intron | 45.0% |
| ! | GGCACCATATGTCGGATTTT+TGG | - | chr1.4:3120675-3120694 | None:intergenic | 45.0% |
| !! | ATGGCCAATTTTGTGATGGG+TGG | + | chr1.4:3120763-3120782 | MS.gene062754:intron | 45.0% |
| !! | TGTTATCTGCCACTTTGTGC+AGG | - | chr1.4:3120703-3120722 | None:intergenic | 45.0% |
| AAGGTCAAATGCGGCTGATG+TGG | + | chr1.4:3121623-3121642 | MS.gene062754:intron | 50.0% | |
| AGGCCTCAATTGTGGTCACA+TGG | + | chr1.4:3121758-3121777 | MS.gene062754:intron | 50.0% | |
| ATACCAGCACTGCAAGACAC+AGG | - | chr1.4:3120385-3120404 | None:intergenic | 50.0% | |
| CAGGCACCAAAGGATCATCT+GGG | - | chr1.4:3122873-3122892 | None:intergenic | 50.0% | |
| CCAAGTATGAGACTACTGCC+CGG | + | chr1.4:3122923-3122942 | MS.gene062754:CDS | 50.0% | |
| GCAAGCTACTATCATGGGAC+CGG | + | chr1.4:3121411-3121430 | MS.gene062754:CDS | 50.0% | |
| GCAGAGAGCAAATTGACAGC+AGG | - | chr1.4:3122837-3122856 | None:intergenic | 50.0% | |
| GTGGGAAGTGAATGGTCACT+AGG | - | chr1.4:3121465-3121484 | None:intergenic | 50.0% | |
| GTGTCCCGGATGTATTGCTA+AGG | + | chr1.4:3121604-3121623 | MS.gene062754:intron | 50.0% | |
| TATACTCATGCAGGCCCTGT+TGG | + | chr1.4:3121370-3121389 | MS.gene062754:intron | 50.0% | |
| TCAGGCACCAAAGGATCATC+TGG | - | chr1.4:3122874-3122893 | None:intergenic | 50.0% | |
| TGGGCAATATCAGGCACCAA+AGG | - | chr1.4:3122883-3122902 | None:intergenic | 50.0% | |
| ! | CGCCATGGCCAATTTTGTGA+TGG | + | chr1.4:3120759-3120778 | MS.gene062754:intron | 50.0% |
| ! | GGTGCCACCCATCACAAAAT+TGG | - | chr1.4:3120770-3120789 | None:intergenic | 50.0% |
| !! | ATCTGCCACTTTGTGCAGGA+TGG | - | chr1.4:3120699-3120718 | None:intergenic | 50.0% |
| !!! | GGATATCAGTGGCGGGTTTT+TGG | + | chr1.4:3120731-3120750 | MS.gene062754:intron | 50.0% |
| ATGAGACTACTGCCCGGTCT+TGG | + | chr1.4:3122929-3122948 | MS.gene062754:CDS | 55.0% | |
| CAGCACTGCAAGACACAGGA+GGG | - | chr1.4:3120381-3120400 | None:intergenic | 55.0% | |
| CCAGCATAAGGACTGTCTGC+CGG | - | chr1.4:3121433-3121452 | None:intergenic | 55.0% | |
| CCGGGCAGTAGTCTCATACT+TGG | - | chr1.4:3122926-3122945 | None:intergenic | 55.0% | |
| GCAGACAGTCCTTATGCTGG+TGG | + | chr1.4:3121433-3121452 | MS.gene062754:CDS | 55.0% | |
| GTGGCAGATAACAGCCATGG+CGG | + | chr1.4:3120710-3120729 | MS.gene062754:intron | 55.0% | |
| ! | AGGATGGCGGCACCATATGT+CGG | - | chr1.4:3120683-3120702 | None:intergenic | 55.0% |
| !! | ACAGCCATGGCGGATATCAG+TGG | + | chr1.4:3120720-3120739 | MS.gene062754:intron | 55.0% |
| !! | TGCCACTTTGTGCAGGATGG+CGG | - | chr1.4:3120696-3120715 | None:intergenic | 55.0% |
| !!! | GGGTTTTTGGCTTTCCGCCA+TGG | + | chr1.4:3120744-3120763 | MS.gene062754:intron | 55.0% |
| AGTCGGGTCAGCACCTACTG+TGG | + | chr1.4:3120821-3120840 | MS.gene062754:intron | 60.0% | |
| CCAGCACTGCAAGACACAGG+AGG | - | chr1.4:3120382-3120401 | None:intergenic | 60.0% | |
| CCGGCAGACAGTCCTTATGC+TGG | + | chr1.4:3121430-3121449 | MS.gene062754:CDS | 60.0% | |
| CCTCCTGTGTCTTGCAGTGC+TGG | + | chr1.4:3120379-3120398 | MS.gene062754:CDS | 60.0% | |
| TGCCGCCATCCTGCACAAAG+TGG | + | chr1.4:3120691-3120710 | MS.gene062754:intron | 60.0% | |
| !! | CCATGGCGGATATCAGTGGC+GGG | + | chr1.4:3120724-3120743 | MS.gene062754:intron | 60.0% |
| !! | GCCATGGCGGATATCAGTGG+CGG | + | chr1.4:3120723-3120742 | MS.gene062754:intron | 60.0% |
| CCCGCCACTGATATCCGCCA+TGG | - | chr1.4:3120727-3120746 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 3120331 | 3122975 | 3120331 | ID=MS.gene062754 |
| chr1.4 | mRNA | 3120331 | 3122975 | 3120331 | ID=MS.gene062754.t1;Parent=MS.gene062754 |
| chr1.4 | exon | 3120331 | 3120400 | 3120331 | ID=MS.gene062754.t1.exon1;Parent=MS.gene062754.t1 |
| chr1.4 | CDS | 3120331 | 3120400 | 3120331 | ID=cds.MS.gene062754.t1;Parent=MS.gene062754.t1 |
| chr1.4 | exon | 3121383 | 3121510 | 3121383 | ID=MS.gene062754.t1.exon2;Parent=MS.gene062754.t1 |
| chr1.4 | CDS | 3121383 | 3121510 | 3121383 | ID=cds.MS.gene062754.t1;Parent=MS.gene062754.t1 |
| chr1.4 | exon | 3122257 | 3122361 | 3122257 | ID=MS.gene062754.t1.exon3;Parent=MS.gene062754.t1 |
| chr1.4 | CDS | 3122257 | 3122361 | 3122257 | ID=cds.MS.gene062754.t1;Parent=MS.gene062754.t1 |
| chr1.4 | exon | 3122832 | 3122975 | 3122832 | ID=MS.gene062754.t1.exon4;Parent=MS.gene062754.t1 |
| chr1.4 | CDS | 3122832 | 3122975 | 3122832 | ID=cds.MS.gene062754.t1;Parent=MS.gene062754.t1 |
| Gene Sequence |
| Protein sequence |
