AlfalfaGEDB | MS.gene059664

M. sativa cultivar XinJiangDaYe / MS.gene059664

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515 GO:0046983
PFAM: PF00010.29

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene059664.t1	XP_003611493.1	87.5	335	34	3	1	329	1	333	6.60E-147	530.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene059664.t1	Q9T072	37.7	329	181	10	12	324	5	325	1.1e-36	155.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene059664.t1	G7K125	87.5	335	34	3	1	329	1	333	4.8e-147	530.4

TFs/TRs:

Gene ID	Type	Classification
MS.gene059664.t1	TF	bHLH

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050633	MS.gene059664	0.802112	6.55E-49	-1.69E-46
MS.gene050657	MS.gene059664	0.805933	1.05E-49	-1.69E-46
MS.gene050826	MS.gene059664	0.833216	6.06E-56	-1.69E-46
MS.gene051702	MS.gene059664	0.811059	8.46E-51	-1.69E-46
MS.gene053147	MS.gene059664	0.817762	2.79E-52	-1.69E-46
MS.gene053811	MS.gene059664	0.859896	3.01E-63	-1.69E-46
MS.gene054291	MS.gene059664	-0.802347	5.86E-49	-1.69E-46
MS.gene054467	MS.gene059664	0.81847	1.93E-52	-1.69E-46
MS.gene054468	MS.gene059664	0.832301	1.02E-55	-1.69E-46
MS.gene054581	MS.gene059664	0.810496	1.12E-50	-1.69E-46
MS.gene05468	MS.gene059664	0.813243	2.83E-51	-1.69E-46
MS.gene059664	MS.gene060802	0.820491	6.67E-53	-1.69E-46
MS.gene059664	MS.gene062754	-0.800625	1.32E-48	-1.69E-46
MS.gene059664	MS.gene065908	0.803989	2.68E-49	-1.69E-46
MS.gene059664	MS.gene069868	-0.841361	4.98E-58	-1.69E-46
MS.gene059664	MS.gene07115	0.838227	3.26E-57	-1.69E-46
MS.gene059664	MS.gene071438	-0.800784	1.23E-48	-1.69E-46
MS.gene059664	MS.gene072632	0.805495	1.30E-49	-1.69E-46
MS.gene059664	MS.gene09647	0.940027	4.70E-100	-1.69E-46
MS.gene059664	MS.gene21460	0.963645	2.43E-122	-1.69E-46
MS.gene059664	MS.gene22710	0.855329	6.79E-62	-1.69E-46
MS.gene059664	MS.gene23103	0.832121	1.13E-55	-1.69E-46
MS.gene059664	MS.gene27164	0.803652	3.15E-49	-1.69E-46
MS.gene059664	MS.gene30964	0.807858	4.12E-50	-1.69E-46
MS.gene059664	MS.gene37647	0.844165	8.95E-59	-1.69E-46
MS.gene059664	MS.gene45128	-0.802424	5.65E-49	-1.69E-46
MS.gene059664	MS.gene45498	0.804942	1.70E-49	-1.69E-46
MS.gene059664	MS.gene48575	0.832828	7.57E-56	-1.69E-46
MS.gene059664	MS.gene48577	0.809888	1.51E-50	-1.69E-46
MS.gene059664	MS.gene48727	0.839688	1.36E-57	-1.69E-46
MS.gene059664	MS.gene48730	0.808381	3.18E-50	-1.69E-46
MS.gene059664	MS.gene53771	0.827061	1.93E-54	-1.69E-46
MS.gene059664	MS.gene58049	0.824526	7.69E-54	-1.69E-46
MS.gene059664	MS.gene58092	0.805067	1.60E-49	-1.69E-46
MS.gene059664	MS.gene58468	0.80914	2.19E-50	-1.69E-46
MS.gene059664	MS.gene61667	0.817044	4.04E-52	-1.69E-46
MS.gene059664	MS.gene63039	0.856403	3.29E-62	-1.69E-46
MS.gene059664	MS.gene64029	0.831916	1.27E-55	-1.69E-46
MS.gene059664	MS.gene65684	0.837119	6.27E-57	-1.69E-46
MS.gene059664	MS.gene68938	0.807058	6.08E-50	-1.69E-46
MS.gene059664	MS.gene69794	0.809137	2.20E-50	-1.69E-46
MS.gene059664	MS.gene70237	0.803422	3.51E-49	-1.69E-46
MS.gene059664	MS.gene73041	0.82019	7.82E-53	-1.69E-46
MS.gene059664	MS.gene73273	0.803911	2.78E-49	-1.69E-46
MS.gene059664	MS.gene76533	-0.835761	1.39E-56	-1.69E-46
MS.gene059664	MS.gene82321	0.807682	4.49E-50	-1.69E-46
MS.gene059664	MS.gene84812	0.809418	1.91E-50	-1.69E-46
MS.gene059664	MS.gene85149	-0.834234	3.37E-56	-1.69E-46
MS.gene059664	MS.gene88141	0.839192	1.84E-57	-1.69E-46
MS.gene059664	MS.gene96598	0.814915	1.21E-51	-1.69E-46
MS.gene059664	MS.gene96656	0.877435	6.30E-69	-1.69E-46
MS.gene059664	MS.gene98848	0.807631	4.60E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene059664.t1	MTR_5g014520	90.746	335	23	3	1	329	1	333	0.0	513
MS.gene059664.t1	MTR_5g014560	70.303	330	74	6	1	329	1	307	9.34e-145	412
MS.gene059664.t1	MTR_6g047570	44.875	361	130	17	1	323	1	330	4.44e-69	220
MS.gene059664.t1	MTR_4g066460	46.203	316	126	11	32	320	22	320	9.46e-66	211
MS.gene059664.t1	MTR_0246s0020	40.967	393	142	14	1	323	1	373	1.13e-65	213
MS.gene059664.t1	MTR_4g066380	44.611	334	154	12	1	320	1	317	2.96e-64	207
MS.gene059664.t1	MTR_4g067010	44.516	310	132	9	32	320	22	312	4.56e-64	207
MS.gene059664.t1	MTR_0246s0050	43.506	308	132	8	43	323	23	315	4.32e-63	204
MS.gene059664.t1	MTR_4g098035	43.506	308	132	8	43	323	44	336	7.56e-63	204
MS.gene059664.t1	MTR_0011s0260	41.979	374	146	13	1	323	1	354	7.82e-63	205
MS.gene059664.t1	MTR_0011s0210	41.711	374	147	13	1	323	1	354	1.27e-61	202
MS.gene059664.t1	MTR_0250s0040	53.052	213	84	7	112	320	56	256	3.54e-60	195
MS.gene059664.t1	MTR_0246s0020	39.840	374	135	13	1	304	1	354	5.17e-59	195
MS.gene059664.t1	MTR_2g010450	49.010	202	96	2	131	332	159	353	5.52e-57	189
MS.gene059664.t1	MTR_4g092700	51.309	191	88	2	134	322	141	328	3.65e-56	187
MS.gene059664.t1	MTR_5g014600	40.395	354	151	13	6	322	2	332	2.47e-55	185
MS.gene059664.t1	MTR_2g104550	45.148	237	111	6	96	322	82	309	3.09e-53	179
MS.gene059664.t1	MTR_4g009540	44.681	235	112	5	96	322	104	328	3.41e-52	176
MS.gene059664.t1	MTR_5g014550	69.919	123	36	1	181	303	54	175	1.14e-50	168
MS.gene059664.t1	MTR_2g104490	40.594	303	145	11	42	331	33	313	1.61e-50	171
MS.gene059664.t1	MTR_4g097950	47.347	245	112	8	88	320	6	245	1.03e-49	167
MS.gene059664.t1	MTR_4g009110	43.426	251	121	6	85	322	105	347	7.13e-49	168
MS.gene059664.t1	MTR_4g097940	40.357	280	152	7	51	322	51	323	1.32e-48	167
MS.gene059664.t1	MTR_8g009020	41.631	233	125	3	96	320	89	318	4.92e-48	166
MS.gene059664.t1	MTR_5g014640	36.918	279	144	6	69	320	46	319	2.63e-45	158
MS.gene059664.t1	MTR_4g097920	38.214	280	158	7	51	322	36	308	4.21e-45	157
MS.gene059664.t1	MTR_4g097920	38.214	280	158	7	51	322	51	323	5.14e-45	157
MS.gene059664.t1	MTR_4g009540	42.857	217	106	5	96	304	104	310	2.20e-43	153
MS.gene059664.t1	MTR_2g104490	39.130	276	134	10	42	304	33	287	2.46e-42	150
MS.gene059664.t1	MTR_2g104560	44.199	181	90	4	144	320	47	220	7.37e-42	146
MS.gene059664.t1	MTR_7g080780	44.324	185	93	1	136	320	137	311	7.17e-41	146
MS.gene059664.t1	MTR_7g080780	44.324	185	93	1	136	320	150	324	7.52e-41	147
MS.gene059664.t1	MTR_2g104650	42.347	196	108	4	134	325	75	269	1.88e-40	144
MS.gene059664.t1	MTR_8g009010	39.091	220	85	5	144	360	127	300	7.65e-38	138
MS.gene059664.t1	MTR_7g451650	48.980	147	64	1	174	320	57	192	2.84e-37	133
MS.gene059664.t1	MTR_8g069740	43.860	171	91	4	137	303	96	265	4.30e-37	135
MS.gene059664.t1	MTR_2g104590	42.487	193	74	5	144	327	62	226	1.14e-36	133
MS.gene059664.t1	MTR_4g009510	45.349	172	81	4	154	324	45	204	2.38e-36	131
MS.gene059664.t1	MTR_2g104500	40.323	186	104	3	135	320	89	267	1.79e-35	131
MS.gene059664.t1	MTR_4g009420	49.660	147	55	2	174	320	65	192	1.36e-34	126
MS.gene059664.t1	MTR_7g050350	48.227	141	62	1	180	320	1	130	1.87e-34	124
MS.gene059664.t1	MTR_7g451650	48.227	141	62	1	180	320	1	130	1.87e-34	124
MS.gene059664.t1	MTR_2g104530	40.376	213	102	6	119	320	71	269	5.38e-34	127
MS.gene059664.t1	MTR_7g451650	47.407	135	60	1	174	308	57	180	5.47e-31	116
MS.gene059664.t1	MTR_6g047550	39.216	255	104	11	1	219	1	240	2.19e-30	117
MS.gene059664.t1	MTR_4g009420	48.148	135	51	2	174	308	65	180	4.84e-28	109
MS.gene059664.t1	MTR_1g072320	29.121	182	121	2	111	285	431	611	1.55e-19	90.5
MS.gene059664.t1	MTR_7g117670	29.940	167	105	3	151	316	402	557	6.57e-16	79.3
MS.gene059664.t1	MTR_8g067280	35.570	149	84	4	151	288	462	609	2.73e-15	77.8
MS.gene059664.t1	MTR_8g027495	28.313	166	109	3	151	316	458	613	2.95e-15	77.4
MS.gene059664.t1	MTR_5g030430	30.337	178	93	5	151	308	493	659	1.34e-14	75.5
MS.gene059664.t1	MTR_1g112680	31.925	213	123	10	38	231	191	400	6.48e-14	73.2
MS.gene059664.t1	MTR_3g030700	30.168	179	113	4	133	303	178	352	1.15e-13	72.0
MS.gene059664.t1	MTR_8g064700	27.368	190	110	5	124	301	225	398	1.19e-13	72.0
MS.gene059664.t1	MTR_8g024770	30.973	113	75	1	151	260	279	391	8.79e-13	69.7
MS.gene059664.t1	MTR_5g064950	27.374	179	113	5	152	314	102	279	1.48e-12	68.2
MS.gene059664.t1	MTR_8g024790	25.234	214	147	5	112	319	256	462	2.40e-12	68.2
MS.gene059664.t1	MTR_5g064950	27.950	161	100	4	152	296	102	262	2.93e-12	67.0
MS.gene059664.t1	MTR_7g096350	46.269	67	35	1	151	216	355	421	7.81e-12	67.0
MS.gene059664.t1	MTR_8g098275	24.413	213	130	4	140	324	390	599	1.43e-11	66.2
MS.gene059664.t1	MTR_0194s0050	26.347	167	101	4	152	296	186	352	2.15e-11	65.1
MS.gene059664.t1	MTR_8g098275	24.413	213	130	4	140	324	297	506	2.53e-11	65.5
MS.gene059664.t1	MTR_8g098275	24.413	213	130	4	140	324	233	442	2.81e-11	65.1
MS.gene059664.t1	MTR_3g498695	27.419	186	124	4	134	310	283	466	3.92e-11	64.7
MS.gene059664.t1	MTR_2g084280	33.094	139	85	4	153	289	135	267	6.61e-11	63.2
MS.gene059664.t1	MTR_3g104100	28.488	172	106	4	153	311	197	364	6.97e-11	63.5
MS.gene059664.t1	MTR_7g083900	29.240	171	108	5	152	310	287	456	7.02e-11	63.9
MS.gene059664.t1	MTR_3g498695	28.161	174	114	4	134	298	283	454	8.16e-11	63.5
MS.gene059664.t1	MTR_7g110810	44.156	77	42	1	128	203	188	264	8.70e-11	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene059664.t1	AT4G37850	44.269	253	126	7	84	324	76	325	2.82e-52	177
MS.gene059664.t1	AT4G37850	44.269	253	126	7	84	324	76	325	2.82e-52	177
MS.gene059664.t1	AT2G22760	44.221	199	88	5	139	320	99	291	2.26e-44	155
MS.gene059664.t1	AT2G22750	44.033	243	117	7	89	319	86	321	1.91e-43	154
MS.gene059664.t1	AT2G22750	44.033	243	117	7	89	319	62	297	2.25e-43	152
MS.gene059664.t1	AT2G22750	36.441	354	158	11	4	319	1	325	3.27e-43	153
MS.gene059664.t1	AT2G22750	44.033	243	116	8	89	319	62	296	5.12e-42	149
MS.gene059664.t1	AT2G22750	36.441	354	157	12	4	319	1	324	1.04e-41	149
MS.gene059664.t1	AT2G22760	45.055	182	78	4	139	304	99	274	3.54e-41	146
MS.gene059664.t1	AT2G22770	35.647	317	158	9	39	320	10	315	6.53e-40	144
MS.gene059664.t1	AT4G09820	32.812	128	65	1	152	279	364	470	7.76e-16	79.3
MS.gene059664.t1	AT4G17880	31.250	160	104	3	151	308	416	571	1.46e-15	78.6
MS.gene059664.t1	AT2G46510	32.331	133	69	3	130	260	372	485	3.02e-15	77.4
MS.gene059664.t1	AT1G32640	30.968	155	106	1	151	305	452	605	5.17e-15	77.0
MS.gene059664.t1	AT3G61950	33.333	138	87	3	151	285	128	263	9.97e-15	74.3
MS.gene059664.t1	AT5G46760	30.769	169	97	4	151	308	415	574	1.01e-14	75.9
MS.gene059664.t1	AT3G61950	33.333	138	87	3	151	285	179	314	1.46e-14	74.3
MS.gene059664.t1	AT2G16910	32.258	155	84	4	152	285	315	469	1.91e-14	75.1
MS.gene059664.t1	AT3G61950	33.333	138	87	3	151	285	128	263	2.30e-14	73.6
MS.gene059664.t1	AT3G61950	33.333	138	87	3	151	285	179	314	3.01e-14	73.6
MS.gene059664.t1	AT1G01260	27.711	166	97	2	136	301	418	560	3.19e-14	74.3
MS.gene059664.t1	AT1G01260	27.711	166	97	2	136	301	418	560	3.19e-14	74.3
MS.gene059664.t1	AT1G01260	27.711	166	97	2	136	301	418	560	3.19e-14	74.3
MS.gene059664.t1	AT1G63650	28.824	170	97	5	151	300	405	570	1.25e-12	69.7
MS.gene059664.t1	AT1G63650	28.824	170	97	5	151	300	405	570	1.25e-12	69.7
MS.gene059664.t1	AT1G63650	28.824	170	97	5	151	300	405	570	1.25e-12	69.7
MS.gene059664.t1	AT2G28160	28.144	167	99	3	134	289	114	270	1.35e-12	68.2
MS.gene059664.t1	AT2G28160	28.144	167	99	3	134	289	114	270	1.69e-12	68.2
MS.gene059664.t1	AT4G30980	28.177	181	111	3	100	270	82	253	3.00e-12	67.4
MS.gene059664.t1	AT4G16430	50.000	58	29	0	151	208	320	377	4.24e-12	67.8
MS.gene059664.t1	AT1G12860	31.818	154	96	4	152	298	268	419	6.53e-12	67.0
MS.gene059664.t1	AT5G41315	28.736	174	97	6	151	300	441	611	6.80e-12	67.4
MS.gene059664.t1	AT4G30980	28.177	181	111	3	100	270	130	301	7.02e-12	66.6
MS.gene059664.t1	AT5G41315	28.736	174	97	6	151	300	449	619	7.03e-12	67.4
MS.gene059664.t1	AT5G41315	28.736	174	97	6	151	300	446	616	7.08e-12	67.4
MS.gene059664.t1	AT1G12860	31.818	154	96	4	152	298	268	419	9.88e-12	66.6
MS.gene059664.t1	AT2G46810	26.203	187	118	3	152	328	123	299	4.13e-11	63.9
MS.gene059664.t1	AT5G57150	26.220	164	101	4	152	301	56	213	4.71e-11	62.4
MS.gene059664.t1	AT1G72210	28.713	202	112	8	152	329	127	320	5.11e-11	63.5
MS.gene059664.t1	AT5G57150	26.220	164	101	4	152	301	55	212	5.19e-11	62.4
MS.gene059664.t1	AT5G57150	26.220	164	101	4	152	301	56	213	5.63e-11	62.4
MS.gene059664.t1	AT5G57150	26.220	164	101	4	152	301	56	213	6.98e-11	62.8
MS.gene059664.t1	AT5G57150	26.220	164	101	4	152	301	55	212	7.64e-11	62.4

Find 62 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTATCCTTTAGAAAAGAATT+TGG	0.226485	5.1:+7272678	MS.gene059664:CDS
CTAATACCCTCAAACGTTCT+TGG	0.234491	5.1:-7275274	None:intergenic
AATAACAGTGTCCTACCTTT+TGG	0.259096	5.1:+7275539	MS.gene059664:CDS
GCTCTAGCTGCTCTTATTCC+TGG	0.270587	5.1:+7272961	MS.gene059664:CDS
TCTTTCTCTCTGCTATGATA+TGG	0.318056	5.1:-7272909	None:intergenic
GTTCCAGCTATTGGAAGAAA+TGG	0.343234	5.1:+7272507	MS.gene059664:intron
CAACGTGAACAAAACTTGTT+TGG	0.357562	5.1:+7272556	MS.gene059664:CDS
CACATCCTTGTCCAAAACTT+TGG	0.362806	5.1:-7275432	None:intergenic
GGACGTGGTGGGTTGTGTTT+CGG	0.364752	5.1:+7279496	MS.gene059664:CDS
TTCTCGCCGGCGACTTTACA+TGG	0.370147	5.1:+7279474	MS.gene059664:CDS
TAATAGTCATGTTCAGTCTA+TGG	0.373573	5.1:+7275313	MS.gene059664:CDS
ACATGTAGAAGCCAAAGTTT+TGG	0.403189	5.1:+7275421	MS.gene059664:CDS
GGTAATTGTGTTTGTGAGAA+TGG	0.404374	5.1:-7272790	None:intergenic
AACTAGCTGGTTATCTGATC+TGG	0.407880	5.1:+7272367	MS.gene059664:CDS
GAGGTCTGTGGCTCATAATC+AGG	0.412438	5.1:+7272885	MS.gene059664:CDS
GAGAACGTCGGAGGAGGGTT+AGG	0.416223	5.1:-7279456	None:intergenic
TGGACAAGGATGTGCTCATA+AGG	0.429386	5.1:+7275441	MS.gene059664:CDS
ATGGACAAGGCTTCAGTCCT+AGG	0.441208	5.1:+7275224	MS.gene059664:CDS
TTGGAAGAAATGGAAATAGA+TGG	0.445551	5.1:+7272517	MS.gene059664:CDS
GTTGTGTTTCGGTTTCTTGA+CGG	0.451196	5.1:+7279507	MS.gene059664:CDS
AAGATAACAAAGGTTGATGT+TGG	0.458857	5.1:-7272636	None:intergenic
TGATATAACCATCGTTGCTC+AGG	0.464649	5.1:+7275574	MS.gene059664:CDS
GATCCACTGCCAAAAGCAAA+AGG	0.466058	5.1:+7275463	MS.gene059664:CDS
CAATTACCTCGAAATAGAAA+AGG	0.474445	5.1:+7272805	MS.gene059664:CDS
GCCGGCGAGAACGTCGGAGG+AGG	0.486200	5.1:-7279462	None:intergenic
GTCGGAGGAGGGTTAGGAAA+TGG	0.492692	5.1:-7279450	None:intergenic
TCTTATTCCTGGCTTGAAGA+AGG	0.494711	5.1:+7272972	MS.gene059664:CDS
ATTATGAGCCACAGACCTCT+TGG	0.506300	5.1:-7272881	None:intergenic
CCATATACCTTCTTCAAGCC+AGG	0.514414	5.1:-7272979	None:intergenic
CGTACTTGATTGCATCTCCT+AGG	0.518134	5.1:-7275241	None:intergenic
AAGAGCTCCAAGAACGTTTG+AGG	0.518931	5.1:+7275267	MS.gene059664:CDS
CAAACTCATCATCAACTAGC+TGG	0.535900	5.1:+7272354	MS.gene059664:CDS
GACTTTACATGGGACGTGGT+GGG	0.547942	5.1:+7279485	MS.gene059664:CDS
AAAACTTTGGCTTCTACATG+TGG	0.548591	5.1:-7275419	None:intergenic
AATTACCTCGAAATAGAAAA+GGG	0.550335	5.1:+7272806	MS.gene059664:CDS
GAGCAACGATGGTTATATCA+AGG	0.552186	5.1:-7275571	None:intergenic
CGACTTTACATGGGACGTGG+TGG	0.562110	5.1:+7279484	MS.gene059664:CDS
CCCTCCTCCGACGTTCTCGC+CGG	0.563566	5.1:+7279461	MS.gene059664:CDS
AGAGCTCCAAGAACGTTTGA+GGG	0.570082	5.1:+7275268	MS.gene059664:CDS
CCGGCGAGAACGTCGGAGGA+GGG	0.574137	5.1:-7279461	None:intergenic
CGGCGACTTTACATGGGACG+TGG	0.574768	5.1:+7279481	MS.gene059664:CDS
TCAAGGATAGAATCCCCAAA+AGG	0.575129	5.1:-7275554	None:intergenic
ATCCACTGCCAAAAGCAAAA+GGG	0.579077	5.1:+7275464	MS.gene059664:CDS
ACAACATTGTACGAGAAGAA+AGG	0.579497	5.1:-7279417	None:intergenic
GATGAGTCAGAACTTAGTTG+TGG	0.581816	5.1:-7275350	None:intergenic
CACGTCCCATGTAAAGTCGC+CGG	0.582380	5.1:-7279480	None:intergenic
TTTCTTTACCTGAGCAACGA+TGG	0.599102	5.1:-7275582	None:intergenic
ACTACAAAGTCACAAGGACA+AGG	0.603785	5.1:+7272856	MS.gene059664:CDS
GGATAGAATCCCCAAAAGGT+AGG	0.609941	5.1:-7275550	None:intergenic
TCATGTTCAGTCTATGGTGA+CGG	0.614450	5.1:+7275319	MS.gene059664:CDS
TCTCGCCGGCGACTTTACAT+GGG	0.621088	5.1:+7279475	MS.gene059664:CDS
GGAGGGTTAGGAAATGGTCT+CGG	0.626341	5.1:-7279444	None:intergenic
AAACTTTGGCTTCTACATGT+GGG	0.634166	5.1:-7275418	None:intergenic
TAGCTTTCAGAAGATAACAA+AGG	0.638184	5.1:-7272646	None:intergenic
GTCGCCGGCGAGAACGTCGG+AGG	0.640985	5.1:-7279465	None:intergenic
CACAAGGACAAGGGACCAAG+AGG	0.647237	5.1:+7272866	MS.gene059664:CDS
ACAAGGGACCAAGAGGTCTG+TGG	0.659567	5.1:+7272873	MS.gene059664:CDS
GATGATTCTGAAGCTGCTAG+TGG	0.660614	5.1:+7275380	MS.gene059664:CDS
AAAGTCGCCGGCGAGAACGT+CGG	0.674579	5.1:-7279468	None:intergenic
CTACAAAGTCACAAGGACAA+GGG	0.698526	5.1:+7272857	MS.gene059664:CDS
GTTGAAACTACAAAGTCACA+AGG	0.718556	5.1:+7272850	MS.gene059664:CDS
GGGTTAGGAAATGGTCTCGG+CGG	0.724025	5.1:-7279441	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
chr5.1	gene	7272332	7279539	7272332	ID=MS.gene059664
chr5.1	mRNA	7272332	7279539	7272332	ID=MS.gene059664.t1;Parent=MS.gene059664
chr5.1	exon	7272332	7272388	7272332	ID=MS.gene059664.t1.exon1;Parent=MS.gene059664.t1
chr5.1	CDS	7272332	7272388	7272332	ID=cds.MS.gene059664.t1;Parent=MS.gene059664.t1
chr5.1	exon	7272514	7272993	7272514	ID=MS.gene059664.t1.exon2;Parent=MS.gene059664.t1
chr5.1	CDS	7272514	7272993	7272514	ID=cds.MS.gene059664.t1;Parent=MS.gene059664.t1
chr5.1	exon	7275224	7275595	7275224	ID=MS.gene059664.t1.exon3;Parent=MS.gene059664.t1
chr5.1	CDS	7275224	7275595	7275224	ID=cds.MS.gene059664.t1;Parent=MS.gene059664.t1
chr5.1	exon	7277324	7277372	7277324	ID=MS.gene059664.t1.exon4;Parent=MS.gene059664.t1
chr5.1	CDS	7277324	7277372	7277324	ID=cds.MS.gene059664.t1;Parent=MS.gene059664.t1
chr5.1	exon	7279388	7279539	7279388	ID=MS.gene059664.t1.exon5;Parent=MS.gene059664.t1
chr5.1	CDS	7279388	7279539	7279388	ID=cds.MS.gene059664.t1;Parent=MS.gene059664.t1

Gene Sequence

>MS.gene059664

ATGGAAAAATTAAACTCATCTTCAAACTCATCATCAACTAGCTGGTTATCTGATCTGGTAAGAAACATTTTTTTTCTTCATATATCACTCTAGTGACCATAGTTCTTAATTATATGCACAAATGAAATGGATTTAATTATACGAATGATTTTTATTCATTATAGTTTTGTGTTTTGTTCCAGCTATTGGAAGAAATGGAAATAGATGGTTGTGATTTGTTTCAACAACGTGAACAAAACTTGTTTGGTGAAGAAGAGTTTCTTTCACATGACATAGAAAGTATTTTTCAACAAGAGGAAAATTTCCAACATCAACCTTTGTTATCTTCTGAAAGCTATTCTTCTTCTTATCCTTTAGAAAAGAATTTGGAAAGACCAAACAAAAAATTGAAAAAAAACACTACTTCTCAGATTCTGTCTTTTGACTGTACCTTAAATACAAAAAAGAACAAGGTTGTTCCATTCTCACAAACACAATTACCTCGAAATAGAAAAGGGTCATTGCAAAAACAAAACATTGTTGAAACTACAAAGTCACAAGGACAAGGGACCAAGAGGTCTGTGGCTCATAATCAGGACCATATCATAGCAGAGAGAAAGAGAAGAGAGAAACTCAGTCAGTGCTTAATTGCTCTAGCTGCTCTTATTCCTGGCTTGAAGAAGGTATATGGTACTCTAATGTCTCATTATAAACTAATTTATTAAAAGTACTGAGATGGACATATTAATTTCATGTTTGGTTATAAACTCCTTCAAAAAAACGTTTGCTTAAAAAAAATGTAATATTTTTTTTCTATTTATGAAAATTTTTGTGTTCCACTTTAAGTTTGTACTAGTATTTATTATGTAGGGCCGCTTTGTTTAAGATTCATAAAAATATGTTTTTTTGTTTTGAACACAAATTTTGATGAGTAATGTTAGCGTGTGTCTTTTACGCTATAAAAAAAATTGTGTCTTTAAAACACAAATTAATGAAACAATATCGAAATAATTTATTAGAATGTGTGTATTAAATTTAACCTTTAACTTTTTAATAAATTGAATGCACAAAATTTAACAGAATATTTTTTCTTTTGAATTTCTTAACATGTGACCTAAGAGTACAAATTAGCATTACCCAATTTTTATATATTTATTTATTGTTTTAGTTATGGTTATAGTATAATTATCTTGGAACTTGTGTAGTCAAAGTTTAAAAAGTGCAAAGAATGATATTTTCAATGCAATTTTTTTTTTTGTTTCCTTAACTAGTGTCCTGGGGGCACTAGTTAACAAGACCCGTTAGTTAAACTATGAAAAATGATAAAAAGTGCTATTAAAACATTGTTTAAGCATCCAAAACTAGTAAATTTTGTATTGAAAATTGTATAATTATAACTTTTACATTTGTTTGACTTGTATTTTCAAGACAATTTTTTTTTTTTTTTTAGTTTCCTTAAACAATGTTCTTATAACAATTGTTAGCTAAACCCTTAAACTATTTAAAAAATAATTTTATATTAGGAATGAAGAGTTTTATTTTGTTTGTGAATTATGTATTCTTTGCAATCGTAAATACTCATTCCTCAAGGCAAGCAAACTTCAATGATGACACCACTTTCACTCAAGAAAATTAAAAAGTTAAAAGCTATCTGAATTAACTTTTAAGGAAAATCATTTTTAATTTAATAACAGGAAGAAATACAAAATATCTTTTTATAACTTTAAACAAACATAAAATAACATACTTTTACTTTTCTTAAAAATCTCCGACAAGTTCTATCTGATTGATTTATATGAAAATGATTTTATAAAAAAGTTTAAACAGAAACACAACTAAAACTAGAACATCAAATGTTGCGTGGGTTAAAAGTTTTTCACATGGATTATTTTATAAAACAAAAATATTTTTCCAATATAAAGGAAAAACAATTCACCCAAAATAATTATGGATAAATAAACCATCTTATTGATGTCTAGATTGACAATGAGATAGTAAAAATTACGATGAATCAACACATTTTTGGCAAAAAGTACTACTCTATTTCTATCAAGGATTATGTCGAATTTCAACCGGTTGAAAGTAAGTTTTTCTCCAACATAATAATTATTTCAATTTATGTACTTGGTTTTGAATTGGTTTTCAACAAATTATATGTTTGGATCTGCGGTGATACAAGTTGAATTTTAGTAAATTGTTTTTGTTAAATTGATTTTATTTAAAAGTGACGTAAATGTTAAGAGATTTATGTTTTTGATACATTTATATAGAATTGATTTGAACAACAAATTTAAGTGAAAAAAAATCACAATTAGACTCAAAAGCTACAAATCCTAACTTCAATTTAAAATCAATTTTAGATGCAAAAATAATTCCAATAAAGAACAAACAAACTTATCAAACTCAATTTTACATCTCCAGGGTCAATTCTAGTTGCTCAAACCATGAAACCAAACCTAAATAGTCATGTTAGCTATTCGTATGATGTTAATTAATTGGTATAAGGTTTGGTTGGTCCCAAAAATGATCCGTAATTGGATAGAAAAAAAGACTCTGGATTCTCACATCTCCTTTGTCAGACATAGAAGATGGAAGCTGTTGATGGTTTGGTTGTTAGAGTATGAAATTTGGCTTAAATCCTCATACTTGTCTGCAAAGTTTCTGGGTATTGCAAATCATGCTTTAGTAGTCTTTTTCTCTTGTATTGGCTCTTTAAAATTGTTGGGAAATACCCCTTCAATATTAACACTAGCTGTTTGTAATATTCTCTATTTTATGAAATGATAAGCTATTGTTTACCGTAAAAAAAAAAAAAAATTGGTATAAGGTTATTAAAACTACTAGTTAGCTATTAATTATAGGAATTTTAGCATCTAATTAAACTCTATTATGTTGTAAAAAAAAAATCTACAGATGGACAAGGCTTCAGTCCTAGGAGATGCAATCAAGTACGTGAAAGAGCTCCAAGAACGTTTGAGGGTATTAGAAGAACAAAACAAAAATAATAGTCATGTTCAGTCTATGGTGACGGTTGATGAACCACAACTAAGTTCTGACTCATCAAACAATGATGATTCTGAAGCTGCTAGTGGTAATAATGAAACTCTCCCACATGTAGAAGCCAAAGTTTTGGACAAGGATGTGCTCATAAGGATCCACTGCCAAAAGCAAAAGGGACTTTTGCTCAAAATATTGGTCGAGATTCAAAAGCTTCATCTCTTTGTTGTTAATAACAGTGTCCTACCTTTTGGGGATTCTATCCTTGATATAACCATCGTTGCTCAGGTAAAGAAAATATCAACTTTTTTTCTTTAAAAATAGAGCAAATCTCCTTTTTAATCATTTAAAGTATCACTCTTTTAATTACTTTTAAACTATATGAAAGTGTCCTACCTTTTGGGGATTCTATCCTTGATATAACCATCGTTGCTCAGGTAAAGAAAATATCAACTTTTTTTCTTTAAAAATAGAGCAAATCTCCTTTTTAATCATTTAAAGTATCACTCTTTTAATTACTTTTAAACTATATGAAAAATGTGTCAAAAGCATAAGAAAATCCGCACTATTAGAATAATCCCGAGCATCTTAAGCTAGGACCAACCGTATGAACTTTTATTAAATTTAAATGCGGTTTTCTTCATCCGATGGTATAAATCGATTTTCTAAAAGGACTTGTTTGAGACTTTTGAAACTTAAAGGACCACTTTGGGAAGAACGGAAAACTTAAAGACCTTTAGATGCATTTGACCAAAATAATAATAATCTTAGTCATCTATTTAGAAAATATATCAACCTTGTACTAAAAATGATTAGGTAACTAAGCCATGGGGTGCATTGAAACCGTGCTGACTGAACATGTTTCGAAGTATAAAACAAATTTATAGTGAAACTTTATAAAAACAAATAAAAAATAACACAATAGTTATATCTTTTTTTTTTTTTTTGTTGAATCTAAGGTTCGAAAATGGACTCAGAAGTATGTTAGACTTTCACTCCTTAAAAGAGTATATTAGACTTTCATCTTGATTAACTAAGTTGTGCAAACATCAATAACTAATATGTCATATTATATATTTATAATTAAATTATACTATTTATTTGAGGTCTTTTTTTTCCTAAATTTCGAGGCTTCATTGAAACCTTAATTTAGACTGCTTGGGGCATTTATTCAATGGTAAAAAGTCATAGTTTTTGTTTTATTTTAAAAACAAAGATATTGTTAAATTTACAAAATTTATCATTAGTGATAAGAAAAAGATAAATTCCAAGAATTAAAAAATGGAAGTAATATTAACAATTCATCATATAAAATTAGACAAGATATTTTTTGATAAAATGAAACAGGGGAGTAAATAGAGGAAAATGATACATCATGAATTTAAATTCTAACTTAAATATTTTTGTATTTTCTCAGTTTGTCCCTTTCAATCTTCATAAATGTATCCTTGTTCTCCTTTTCACAAGCAGTTTTTAAATTGATATGTGAAATTAATTAAGGAGAGGTTTTATTTTGTATTTGGAAACAAAGAGGGCTTTCGCTGAGAAAAAAGAGAATTACAAAGAAATTAATCAAGGAGTAGCAACTCCAAAAACGTCATCAATAATCATTTGAGTGATTTGAATGGACTTTCTTATGTTAAGATGTTTACGATTACGTAACATTTTAATAGTATGATTAAATTGATGAGTTTAATATAATTTAAAACTATATTTTATCGCTGTAACTTAAAGACTAGATTGAAGAGCGATTAACAGTTTAATTGAGTACTAAAATGATGATTTTTTTCCTTGTAAAAAAAAGTTGATGATTTTTTTCCCCCTTCTTGTGTCCTTTTCAATATTTATAAATGTACTTGTGTCCTTTTCTATATTTATAAATGTAGTTGTTTTCCTTTCGACAACCAAATTTTCAATTGATTTGAGAAATTAATTAAGGCTTGTACTATTTCCCTTGAATTATTTGGGAAATGAGGAACTTACACGAATTTGTCCAAACGATTTTTTTTTTTGCAGATGGGAACGGGGTACAACTTGACCAGAAATGATCTTGTGAAAAAGCTACGTGTGGCTGCATTGAGAGCCATGTTATAATTGTCCTAACGTGAATGTGGCCCCAATGGTAGATGCAACAATAATCATATGATATGATCATGGATGGACGTACCAAACACTTATTAACTAATAATCTGATTCAAATGCTAATACTATTCGTGTCATCTTGGCCCTACATAATGACTTCTGAAGAATAGAGCTCCATGAACCATTGATTTTATCATGCTCACTCTGTGGTCTCATCATGTTTGTTTCTATTATAGTATGATAGATAGCATCAGTTTTTCATTTTCTGTACTATTCACGTAACATGAATAAAGTTTGAGAATATATACATATAATTGGTCTATAAATGATGACTTAGCTTATTTGATCATTTCAAATAATAGATTAAGATTTGGCTATTTCACAGAGATTTAAAAAATTGTATAATATAAATAAAAGAGCAAAAAAAAAAAGCAAAATATTTGTTTTTAAGCACTCTCCGATCATATTTATAAGAAACAATTGATTTTTTTTTTTTTTTTTTATAACTTGAGGGGATGAGACAAACTCAAATTATCAAACTAAGATGAACCTATTTTGCCAAACAAATCAACACATGGTTTTCTTCACGAAGAATACGTTGTAGAACTAGAAGCACAAAATAGTAACATATATGCAACGACTAATCAAAATCCTTAATCAAATTCATACCATTAAGAGAGTCTATGTAACAGACAAGCTTTTTGATCCACAAACTCCAACTTATACTAAGAGAAGACCATGCAAAATTGCTAAAAGCTCTGGATGCAACTTGTACCATTACCTATTCTAACCAAATTAACAATGGAACCCACAACACACCTAGATTACCAACTCCACATTAAGGACAACCACGTTTTTTATAGGATCATGTGAGGTCACCATCATGTGAGGACAACCTGTACTAGCTCTATGATTAATCTCAACATAAGTGTTAATACTTTTACATCAGTAAATTATATAGGGTTAAATATGTTTTTGGTCCCTATAAATATACAAACTTTTTGTTTTAGTCCCTCTAAAATTTTCCTTCAACTTTTTGTCCCTAAAAAATTTTCCATCTTCACTTTTGGTCCCTCTTTTAAAGTAAACTCATATGTAGAATTCATATTTTTGAATAAAATTTTGCAGAAAAATTCATAATATTATAAGAATCTCTCCCAAAAAAATTTAGAATTTTTTAACAAAACATGAATTTAATATGAATTTTTATATTTTTTATGGTTAAAAATTCATATTAAATTTATGTTTTGTTAAAAAATTCTATTTTTTTGTGGGAAATATTTTTACAATATTCTACACATTTCTGCACAATTTCATTAAAAAAAATACTAAAATTAACTTAAAAATAGGGACCAAAAGTAGTGATTGAAAATTTTATAGGGACTAAAAGTTGAAGGAAAATTTTAGAGGGACTAAAACGAAAAATTGGTATATTTATAGGGACTAAAAACATATTTAACCCAATTATATATTGTGACTTTTTGAATATGGTATATCACCATTTTCTTTTGGGAAATATTAAATAGTGTCCCTGGAGCACTAGTTAAAGAGACTAATATAGAAATGTTGCATTGAGAAATGATGAAAAATGAAATGTTACATTTTATGAAAGTAAAAAAATTGTTGTTTTTAATGAAAATTTTCTATTTAACTTTCTTAACTAGTGTCTCGGAGGCACGAGTTAACATAACCATTTTCTTTTTAGTCTATAAATCGGAGAGAGACCAAAATAGGAGATTTTAAAATGGAAGTACAAATTGTGAATGAGTTAAAATAAGAGAAATACTGTAATTGAGTGTAATTATTTTCATTTACTTGATGGGATAAAGTAAGGGAGTATGTGTCCCTTTATATGTGACATATATGAAACAAGATCCATTTCTCCGCACCACCGTTTCCACCCCGCCGCATCTCTTTCCGGATCCATCGCTTTGCCGCCGTTCTTAGATGGTTTTGGATCCAGTTTGCGATGTTGTTATGTGTTTTTGGTTTTTGTAGGTGGGGTTGCTTCTATTTCGTCGTTCTCTCCTTTCTTCTCGTACAATGTTGTGCCGCCGAGACCATTTCCTAACCCTCCTCCGACGTTCTCGCCGGCGACTTTACATGGGACGTGGTGGGTTGTGTTTCGGTTTCTTGACGGTTTGATCTGA

Protein sequence

>MS.gene059664.t1

MEKLNSSSNSSSTSWLSDLLLEEMEIDGCDLFQQREQNLFGEEEFLSHDIESIFQQEENFQHQPLLSSESYSSSYPLEKNLERPNKKLKKNTTSQILSFDCTLNTKKNKVVPFSQTQLPRNRKGSLQKQNIVETTKSQGQGTKRSVAHNQDHIIAERKRREKLSQCLIALAALIPGLKKMDKASVLGDAIKYVKELQERLRVLEEQNKNNSHVQSMVTVDEPQLSSDSSNNDDSEAASGNNETLPHVEAKVLDKDVLIRIHCQKQKGLLLKILVEIQKLHLFVVNNSVLPFGDSILDITIVAQMGTGYNLTRNDLVKKLRGVASISSFSPFFSYNVVPPRPFPNPPPTFSPATLHGTWWVVFRFLDGLI